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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062564 ID=TCONS_00062564|Name=TCONS_00062564|organism=Clytia hemisphaerica|type=transcript|length=1594bp
CCGTTTAAGATGGACCCGACTGTTTCATTTGCACTAGCCTTTGGCCACGT
AAATTACCGCTCGCTGAGCTGTTTGTTTACATCCGAGCACGATGATCGAG
ATTGAAGCTCAAGttgaagatttttgatttttggacaTTGGAAACCTTAT
AAAACAATTCATTTTTCTTGATTGGACTTTGCCTGATGCGTCCTGAAATC
CAGCTTTTGTTACTGCTGCTTGCTGTTCCAGCGCAATATCTCATCTCAAA
ATGGATGACCCCTCAAGCAGCAGACCGAGAATATCTCACAAGACGGATTT
TCTCTGACACCTCAAACGTTTTTCGTAAAGCTTGTGACATCAAAGAATGG
GCAAACTATTTGAattatttgaaagaaagaattttACAGAATTCTGACAA
TGGTGAATGCCCTGCAAAGGAAGTAATGCTTTACATGGAGCCCAATGGAT
ATTTCTCAGGCTCTCCAGAACCAAGGACAGATCGAACCAATGTCAAATAT
CGAATTGGACAAGTCATAAAGCATAAGAAATTTGGATATCGTGGTATAAT
TGTAGGATGGGATCCAAAAGCAAGGgcACCTGATTATTGGATACAAGTGA
ATCATTTCGATCCGACGTGGAGATATCAACCAAATTATTCAGTACTTGTC
GATGCCAGGGATCGAGAAGACATCCAGACTACTTATGTTGTTGAAGAGAA
TATCGAAATAGTTTCCGATACAGAAGTAAAACATCCTGAGACTGACGAAT
TTTTTGAAGGTTTTGATGGAGCGCAGTACACTCCACGGCCTTTCCTTAAA
GAACTTTACCCTAAAGATTAGGGACAATTGTGCCTTAAAAACGAGTATGG
GAATTAANGTCGGGCTGTCTTTTTTAGCTAAATTACTTCCAAAACCATCA
CCATCAAGCTCACAAATGAGAAAATGAAGTAACgattaattatttatttt
ttgacaaatttaaaTTAATATTAAGCATTCTAACTAGTTAGTTAatcaat
ttaacaaaaaaacaatattttttaacgTGTAATCCTAGTCTTAAGCAGGT
AAGTGCTGGTTACGATTCTGcttgtttaaaatttcaccaACGTACacgtt
attttataagaacatccaaattttttgaaacctttggaTGTTTCGAATAC
TTCTCGAATTTTTAGccttcaaaatgttcttaaaattctttcttaaaaaa
cccattttgtgagtatttttgtgcaatttcctaagaaattgggtgtttta
gagtccataaagTCTTAattgttctcaatattttggtcatcgaagcctta
cgttcttatatagtttgttcttataaaaaacaacgtgcAGTACTAGTTGT
TGTATGGATTTTATCGTGTCCGAATTTTGTAGGATTTTTTCATTCCTTTG
TCTTCATATTCACTaaaaaaaagttctctaacGAAAATTTCTTTCAGACG
ATTTTTCTAGGTGTTAAAAGATCTTAGGCAAGGGCTCCATATTTTAGATa
agatttagaatttttttagagTATCTTAGATTTGAAtccttttaagattt
tttctaGTATTTCATGCTAGAGTTGAACTGAAACGACAGAAAAt Run BLAST on NCBI protein sequence of TCONS_00062564-protein >TCONS_00062564-protein ID=TCONS_00062564-protein|Name=TCONS_00062564-protein|organism=Clytia hemisphaerica|type=polypeptide|length=211bp
MRPEIQLLLLLLAVPAQYLISKWMTPQAADREYLTRRIFSDTSNVFRKAC
DIKEWANYLNYLKERILQNSDNGECPAKEVMLYMEPNGYFSGSPEPRTDR
TNVKYRIGQVIKHKKFGYRGIIVGWDPKARAPDYWIQVNHFDPTWRYQPN
YSVLVDARDREDIQTTYVVEENIEIVSDTEVKHPETDEFFEGFDGAQYTP
RPFLKELYPKD Run BLAST on NCBI transcript from alignment at scaffold_369:316106..327244+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062564 ID=TCONS_00062564|Name=TCONS_00062564|organism=Clytia hemisphaerica|type=transcript|length=11139bp|location=Sequence derived from alignment at scaffold_369:316106..327244+ (Clytia hemisphaerica)
CCGTTTAAGATGGACCCGACTGTTTCATTTGCACTAGCCTTTGGCCACGT
AAATTACCGCTCGCTGAGCTGTTTGTTTACATCCGAGCACGATGATCGAG
ATTGAAGCTCAAGttgaagatttttgatttttggacaTTGGAAACCTTAT
AAAACAATTCATTTTTCTTGATTGGACTTTGCCTGATGCGTCCTGAAATC
CAGCTTTTGTTACTGCTGCTTGCTGTTCCAGCGCAATATCTCATCTCAAA
ATGGATGACCCCTCAAGCAGCAGACCGAGAATATCTCACAAGACGGTTAT
GGCGGTAGctatatcattttttaaatccAAGCCTATTTTTATTATTCAAA
AGAAAGCCTTCTGtcaatcaattgtaaaaggggttacgcatgATACGAAA
ATCTTGTGTtagcaagcgaaaggttttttacactacagtatgtggccccc
aaaacggagatcaaatttgaaatttcactcaaatctagaggaaaagagat
tttacaaaaatttttgctgcatgaaaacctttaacatctctactttattt
cctggaatttctttttcaaaattttcaatttcaacaatatttttcaatcg
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgt
ctcaaaccagcaaaaacatgctcatttttaagtataaccatcattctttc
aaaataaacaaaaatcgtttaattctgataaatctacaagtcagaatctt
catctTAATGAAAACCCCCGTTTTGGGGTCGTcttcgttttgggggccat
atactgtacatACCGTCAGCGAAACTTTGCGATTGCTAGTAGTGTACaac
ggaaaaggaccaaaacgccacaaaagtagatttaagaCCAATTTTTAGAA
GCGAAAAGATCCCAGAGATggggcaggtatgttttcccgggaatgagaaa
gttagccattttatgatacaattttaaaaacttatacCCAGCcttgcgtg
atgcgtgatcggaaaataattcgaggcatgatttgggctattttcccGAT
ACttgcatggtgaacaaaccatttaaaacacgagagcaaggaaaatttct
atcaatgcattttaaacatgtacaaactccaaaagtgaaccaaaagaaag
ttgatattctattttcaaaacaaactgcttttttgaagtttttttaactc
aaatatcttaaaatttcgacctaagataagaacataataaggattttttg
gtataaaaaatgttttattataCTTTGCGCAAAGTAGCGGAATTTTGTTc
cgtctttttttcttttctcgttttgttaaatcagggggtaatgtatatct
acaaaaattgatcttgttcataaaaattgaaaatattttacaataagaaa
accaaaggaaaatttatattttcaaaatagatgaaactAGACggtagacg
gttcccgtcgtcgcaaacgccggttaacggttttgcttgcacatcaaaag
cctttaaaatactataatgtgggttaattcctgacatcgttttggcttag
AATGCTGCATTCAAACAGGATTAAAGGAACGATCCCACTTTTCGTTTAGT
TTGCTTGAACCATCATATATTCAAGCCCTCCGACAGCTCCAAAACTCTTG
ATCAACTTTTATCCATTTCTCacaagaaaaaatctttcaatgaaCCATGG
TCTTGATTTTGCGTACTTTCAATTTTCTGTGTGACGTGTGTCCAGTAGAT
GATGTTGAAAAGAATGTAAGCTGTTGGGAAGAGAACCATACTGGCTTTAC
CCACTAATCGGACAGCTCGCTTGGTCACGTGCATACAAAACGGGTTGCCA
TAGATACAGAACTTCAAGTTGGGCCAGAATTTGCAGAAAGAGCTGGTCTT
TAGATGTCATTTCGTTTACTCACAGCACACTACTTTTTATTGACACTAGC
AAAATAAGGTTTAAATTAGAATACTTTTCTAATAGGGAAAAACTGACTAA
CAATCACAATAAATACCATTTTGACTCCAGAAATTAGTGGTGaagacatt
gatttttaaaaagtggTGTATATTTGTAAGGGGGGAGGAACGTGAGTGTT
CTGAAATCCGTGCAACCCGCTTGCTAAAAGATTTCAATATTTACACATCT
TCCTCTCTCTATCAAAACAACTCAATGAatgaattcaattttttaaatgc
cTGTAGCAAAATagcactttaatgaaagaaggaaattaaaaacccttttt
tgttgtttttttcctgCAATAAATTCTGAGTATTTCGTAAAAAAATGAAC
AATGTTTAACTTGAGANAgtctgtttttgttgttttttccctccaataaa
ttctgagtatttcgtaaaaaaatgaacaattttTAACTTGAGAAAAGTGT
TAATATGGATTGGATCTTAAGTtttgactttcatttcatttttgtgCCAA
AGCTCCTTGACATGATCACGTTCCATAGCTCAGGGATCTCCTCTGGACCA
TTTATGTTCccaatttggaccaaaaatctTGTCCACTAATTATTCAACAA
AGGAGAATATTGCTCTACAATGCGACGACTATAAATTAATATCTGACATT
AATTTTGAGTCACATCTTATTTTCGTTTCTAGGATTTTCTCTGACACCTC
AAACGTTTTTCGTAAAGCTTGTGACATCAAAGAATGGGCAAACTATTTGA
attatttgaaagaaagaattttACAGAATTCTGACAATGGTGAATGCCCT
GCAAAGGAAGTAATGCTTTACATGGAGCCCAATGGATATTTCTCAGGCTC
TCCAGAACCAAGGACAGATCGAACCAATGTCAAATATCGAATTGGACAAG
TCATAAAGCATAAGAAATTTGGATATCGTGGTATAATTGTAGGATGGGAT
CCAAAAGCAAGGGTAACtattaaacatttattttaCATGGTGTTAAAACA
TCTTCTAAAATATTCCTTGACAAAAAATCACCAAGCAGAGTAGTAGGAAG
GCTTAAGATCAAAATAAACACattgtttcaaattttattcGAATTCTGTC
ATTTAGAAGACTAGCCGCAAAGtcatttcaaacttttcaagtgatagaac
atttgaaatattgttgGTAAAAGAAGatttaaatttgataaatttttttc
aaccttttttgtattataagaaattttaagatttcacgGGGACTCAATGT
TGCCAATAAGATCCTTTCAAATTTCCTAATGGAAAACCCATTGAAATAAT
TAATCATGTATATACATTAATGTTTTATTGACTAACAGATAAATAAAATT
AAGCCTTGTTTACAATGAGTTGACTTGAGCCTCGTTTGCAGGTTGTACCT
CAATTCCTCTCTGCGATCTGACACGTTGACAAAAATATGAGAAGATGAAG
TTCCTCACTGTCTCTAATCGTACACAATACACCAAAGGGTCTAATAACGG
GTTCGAAACAAATAAAACAGTTGCCCATGTTAATAGGTAACTTAAGATGA
AATCATTGTCACTCCAGAAAACAAACAAAGGGAAAACCACAGTCATTGGA
AAGATGCAAACACTAAATGCTATGAGGActgattttgacattttagctgC
CTTAAGTTGTATTTTTACCTCCTGAGTATTGTCTCTAGCACTGATCAAAG
TGCATTCTCGATTGATTTTGTATTGTGACCAACATAAACTAATATAAACA
GTTAATGtaatgaaaattgataaagCATAATATAAACCTATCGGTAATGG
ACTGTGGATGACTAGATAAACGAGAATTGATCCTATAATTAGAAATAGCC
ATACGATAGTTAAGATAAGAAAGATAGTCTTTGTTGAATTGCATTGGAAT
CGATGAAAAGGTCTAACAATCTTTAAGTATTGTTCCCCGTTAATGAGGAC
GATAACGCTAAGTGACATTAAAAGTAGAATGTTTGATAACATACGAAACC
ATGTCAGAACGGTACAATCTAGTCGTTGATGATTGGCTGTTGTATAATGT
CGGTAAACTTGTAGTGGATGTAATGTGACGCCGGTGATCAAATCTGTCAA
CAGCAGTGTGATTAAGAATTGGTGATATGACGTCTTATAATAAGACAATT
TGTAGAAAACATACAATACTGTTATGTTTGTCAGTATTGTTGCAAACATG
AGAAAGGTATACACATATAGAAGGATTTGATAGTTGATCAGTGCGGCTTC
GGNGTGAGAAGATGAAGTTCACAATACACCAAAGGGTCTAATAACGGGTT
CGAAACAAATAAAACAGTTGCCCATGTTAATAGGTAACTTAAGATGAAAT
CATTGTCACTCCAAGCAACTGACAAAGGGAAAATCACAGACATTGGAAAG
AAGCAAACACTAAATGCTATGAGGACTGACTTTGCCATTTTAGCTGCCTT
AAGTTGTATTTTTACCTCCTGAGTATTGTCTCTAGCACTGATCAAAGTGC
ATTCTCGATTGATTTTGTATTGTGACCAACATAAACTAATATAAACAGTT
AATGtaatgaaaattgataaagCATAATATAAACCTATCGGTAATGGACT
GCGGATAACTAGATAAACGAGAATTGATCCTATAATTAGAAATAGCCATA
CGATAGTTAAGATAAGAAAGATAGTCTTTGTTGAATTGCATGGAATCGAT
GAAAAGGTCTAACAATCTTTAAGTATTGTTCCCCGTTAATGAGGACGATA
ACGCTAAGTGACATTAAAAGTAGAATGTTTGATAACATACGAAACCATGT
CAGAACGGTACAATCTAGTCGTTGATAATTGGCTGTTGCATAATGTCGGT
AAACTTGTAGTGGATGTAATGTGACGCCGGTGATCAAATCTGTCAACAGC
AGTGTGATTAAGAATTGGTGATATGACGTCTTATAATAAGACAATTTGTA
GAAAACATACAATACTGTTATGTTTGTCAGTATTGTTGCAAACATGAGAA
AGGTATACACATATAGAAGGATTTGATAGTTGATCAGGGCGGCTTCGGTA
TATAATAAATTTGAAGGCTTGCACGATTCATAATCAGCATTGGTTTGTTG
AAAAGTTGTGTTGTTAAGAGCCATTAGATTTTAAAACACCAGTTCCTGCA
ATATAAACCCTGTATATTTGATATATAACAAGAAGCTCACAATTTAACGG
TAAAAATTATTCACAAAAAACGttctatatatttattttcggctctttta
ttttttctaccGGCTGTTCTATAAAAAAGGCATGTCAATTCCAATATCAA
CAGATTTCTTTATCACGCGGgagaaaattttaataattattgTAGAGGCC
TGAATGTAATAACAATAGATTTTAAAAAGTGAATCTATTTTCaaggttac
acgttttttttttattagaacccagtttgtaagaacatttaggctgaaat
ttggcaaaaatttaagaacattataagaacaTGTCCAGCCTGNNTTTTGT
GCAATTATTACTGTAATTATTCCTCTCATCTAAAAATAATAGCAAATTTA
CTCGATTTTTAACCCAATATCGNNTATGTTTCACAATCATTTTcccaatt
tcttattttttcttttttttcctgctttgcaattttctttttgatatatT
ATCACTTACAATTTTTAAAGAGACCGATTAGGACtaagattgaataaaaa
ttcccttttttacTTGTTTTCCGGCCGGGTGAGATTGAATTTATTCTCCA
TCCTGTCGTTTTCacgcctgtaccaaactcttcttcatTGTATGCAAAGG
TAACATTAGATTCTGTTTGTTACCAATAAGAGACATAACGCGCCTGGTAT
ATTTTTTTATGCTAGTCTTACTGTTGGGtccaggatttaaattttttttt
ttgtaatctcgttataattaaaattcagtatTGATTATAAGGAGGGATTT
TTATATTAATTCTGTTACCACTTTTTTCCGGCTGTAGATTATTATGAATC
CAcggattgaaagattttttttcatttaaggcACCTGATTATTGGATACA
AGTGAATCATTTCGATCCGGTAAGCATTGGCCATTTATAATCAAAGAGGG
GAATAGCGTGGTATTACTCCTACCTTAAAGGAGGAAATtctggcggaaag
aaaatttggtgttcctgccaaaatttattttttcctccatccaccaaatt
aaattcccgccaaatttaactcATTTCACGCATTCCCCAAATTGgtgcta
tttcaagccttaaaacaggtttttttgcttatttaataactcttttggcc
aaaaatatcctgcaaccgccaaattaaattcccgtcaaatttaatttatc
tcgctatccgccaaattgaattccttctgaaaaaactttttcggccaccC
GCCAAagtaaattctcgccaaaatttcttcctttaaggtaattttATGGT
GAAAATACAAAGAGCTATCGAATTAGTGCTCAGGTACATTTTGGTGCTCT
ATGTCTTTCGACCGCCCCCTAAAACAATCGGTCACTGTGagcatagcgtc
agcctgggtttaggtcaaaggcaaaaattaggtccccgcTGAGatttaag
tccccccaaagatttataaattttttgttagcccccaggacttttggCCC
TAGACacttttacaaaattgatccagtaaaaaagggttttccaatgtaaa
ttgcgttcagttgtaagttaaagataaaatattttgcacactttctataa
aaatattgcgctgcaggggaaaatttttcagattcatgagcttcaatttg
agtaattgaagccaactattaagctgaattattttagcccccacgttaag
tgatgagattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNGCCCccacgttaagtgatgagattttagctccccccaag
tacataggtcccccaaaaaaagtggtgtacttccagccccctcctttttt
gggaaagaTTTAGTGTGTAAACCCTGGCTGATGCTATGGTGAGGACTGCT
TTCCTATCACCACGCTACTAAAGAGAAAGTTAAAACTTTTGAAGAAGGAG
AATCCTCGTAAGAGGATTTAGAAAACTTATCTCATATTCacagtattttt
tttaatttctaatttcatataagaacaatttagcGATAAAAGGACCCGAA
ATCGCTAATACCAGGTCTCACAAAAACTTTATGACACGACAAACACAGTG
AGGATGCTAAGCTCTAAGCTCTGGGAAAAACGAAAGGTTTTCTATGAATT
CAACTCcaaatcacaaaaatttaaaCAATATTCTATTTTTATACGTGCCC
TCGGGACCTACCCtacggaagccgagaagggacatccaaactttcttttt
tgtcgactttttttcttttttggccgactttttttctttttttgatttga
agaccTACCCtacggaagccgagaagggacatccaaactttcttttttgt
cgactttttttcttttttggccgactttttttctttttttgccgactttt
tttcttttttgtcgactttttttctttttttgctgactttttttcttttt
ttgccgactttttttctttttttgatttgaagaccTACCCtacggaagcc
gagaagggacatccaaactttcttttttgtcgactttttttcttttttgg
ccgactttttttctttttttgtaaacttttttctttttttgcggactttt
tttctttttttaactaacaactttttttctttttttgaaaattttttttc
ttttttttgaggacttttttttctttttttcacaaaaccCCCGGGTTTAA
AAATGGTGTGGTTTGTTATGTTTCagtgtctagatctcgagataattcat
atCTTTTACggcagattgaatctagcaatttttttgtttacgattgatat
ttttttcgaaatttagcggtaaattttagtttcaatctgtcatttgtgta
aaaaccaggcgagccgctcaaggccgcgcaacttttgTAGGAtctgttgg
cttcaaatcctaccaaggagattttattctagtccttcgggcttatactt
cattgatctAAGGTGTATATAtactgaaaaactgctgactcaaatgaaaa
tatcgataattttcaatacttaaaccaaaatatatgtcgagatctagaca
tcgaaagttaacaaacaatACCAATTATGGATACTAATAAATTAGAGCCG
CCagctgtgagaaagatttttcctaaaaaaacgCTCCcagcaaaatgacg
tcatcggaaaacgccaaaaacgtccATTTTCGCCttcaaaatgccatttc
tcggcacttTTCACACCTGATTTTCAGACCTCGAAAAAAACGTTAGTTAA
GGGGGGACTCTttgattaactaaaaatcgattcactcgaaaactgcagga
gattcgaagggcgaTTTTTTCTTATCAattcttttttgtcaattctacac
tttattaggagcataatatcaaaaatttgccctcgTCAACTAAAAGAAAG
CAGTCTCGAAAAgtaaagttaaattaaaaaaaacctttttttgaaaaaaa
gaaaaaagtctgcaaaaaaagaaaaacagttttcaaaaaaagaaaaaaag
tccgcaaaaaaagaaaaaaagtcagcaaaataagaaaaaaagtcggcaaa
aaaagaaaaaaagtcgacaaaaaaagaaagtttggatgTCCCCTCTCGGC
TTTCGTACTACCCAGTTGGTACACAACATTGTttcgttcatctaacgtta
tatgggcgTTGTGGACATTGGATAAATtatgaaacaacgttgtgtgtcaa
tTGGGATAATCTCTTTCTTAATTTAGCAAacctttttcgtttttttgtag
ACGTGGAGATATCAACCAAATTATTCAGTACTTGTCGATGCCAGGGATCG
AGAAGACATCCAGACTACTTATGTTGTTGAAGAGAATATCGAAATAGTTT
CCGATACAGAAGTAAAACATCCTGAGACTGACGAATTTTTTGAAGGTTTT
GATGGAGCGCAGTACACTCCACGGCCTTTCCTTAAAGAACTTTACCCTAA
AGATTAGGGACAATTGTGCCTTAAAAACGAGTATGGGAATTATCATTGGG
TTGTCGTTCAAAGCTAAATTACTTCCAAAAACTTGCCATACGTGGCTCAC
AANGTCGGGCTGTCTTTTTTAGCTAAATTACTTCCAAAACCATCACCATC
AAGCTCACAAATGAGAAAATGAAGTAACgattaattatttattttttgac
aaatttaaaTTAATATTAAGCATTCTAACTAGTTAGTTAatcaatttaac
aaaaaaacaatattttttaacgTGTAATCCTAGTCTTAAGCAGGTAAGTG
CTGGTTACGATTCTGcttgtttaaaatttcaccaACGTACacgttatttt
ataagaacatccaaattttttgaaacctttggaTGTTTCGAATACTTCTC
GAATTTTTAGccttcaaaatgttcttaaaattctttcttaaaaaacccat
tttgtgagtatttttgtgcaatttcctaagaaattgggtgttttagagtc
cataaagTCTTAattgttctcaatattttggtcatcgaagccttacgttc
ttatatagtttgttcttataaaaaacaacgtgcAGTACTAGTTGTTGTAT
GGATTTTATCGTGTCCGAATTTTGTAGGATTTTTTCATTCCTTTGTCTTC
ATATTCACTaaaaaaaagttctctaacGAAAATTTCTTTCAGACGATTTT
TCTAGGTGTTAAAAGATCTTAGGCAAGGGCTCCATATTTTAGATaagatt
tagaatttttttagagTATCTTAGATTTGAAtccttttaagattttttct
aGTATTTCATGCTAGAGTTGAACTGAAACGACAGAAAAt Coding sequence (CDS) from alignment at scaffold_369:316106..327244+ >TCONS_00062564 ID=TCONS_00062564|Name=TCONS_00062564|organism=Clytia hemisphaerica|type=CDS|length=2544bp|location=Sequence derived from alignment at scaffold_369:316106..327244+ (Clytia hemisphaerica)
ATGCGTCCTGAAATCCAGCTTTTGTTACTGCTGCTTGCTGTTCCAGCGCA
ATATCTCATCTCAAAATGGATGACCCCTCAAGCAGCAGACCGAGAATATC
TCACAAGACGGATTTTCTCTGACACCTCAAACGTTTTTCGTAAAGCTTGT
GACATCAAAGAATGGGCAAACTATTTGAattatttgaaagaaagaatttt
ACAGAATTCTGACAATGGTGAATGCCCTGCAAAGGAAGTAATGCTTTACA
TGGAGCCCAATGGATATTTCTCAGGCTCTCCAGAACCAAGGACAGATCGA
ACCAATGTCAAATATCGAATTGGACAAGTCATAAAGCATAAGAAATTTGG
ATATCGTGGTATAATTGTAGGATGGGATCCAAAAGCAAGGgcACCTGATT
ATTGGATACAAGTGAATCATTTCGATCCGACGTGGAGATATCAACCAAAT
TATTCAGTACTTGTCGATGCCAGGGATCGAGAAGACATCCAGACTACTTA
TGTTGTTGAAGAGAATATCGAAATAGTTTCCGATACAGAAGTAAAACATC
CTGAGACTGACGAATTTTTTGAAGGTTTTGATGGAGCGCAGTACACTCCA
CGGCCTTTCCTTAAAGAACTTTACCCTAAAGATTAGATGCGTCCTGAAAT
CCAGCTTTTGTTACTGCTGCTTGCTGTTCCAGCGCAATATCTCATCTCAA
AATGGATGACCCCTCAAGCAGCAGACCGAGAATATCTCACAAGACGGATT
TTCTCTGACACCTCAAACGTTTTTCGTAAAGCTTGTGACATCAAAGAATG
GGCAAACTATTTGAattatttgaaagaaagaattttACAGAATTCTGACA
ATGGTGAATGCCCTGCAAAGGAAGTAATGCTTTACATGGAGCCCAATGGA
TATTTCTCAGGCTCTCCAGAACCAAGGACAGATCGAACCAATGTCAAATA
TCGAATTGGACAAGTCATAAAGCATAAGAAATTTGGATATCGTGGTATAA
TTGTAGGATGGGATCCAAAAGCAAGGgcACCTGATTATTGGATACAAGTG
AATCATTTCGATCCGACGTGGAGATATCAACCAAATTATTCAGTACTTGT
CGATGCCAGGGATCGAGAAGACATCCAGACTACTTATGTTGTTGAAGAGA
ATATCGAAATAGTTTCCGATACAGAAGTAAAACATCCTGAGACTGACGAA
TTTTTTGAAGGTTTTGATGGAGCGCAGTACACTCCACGGCCTTTCCTTAA
AGAACTTTACCCTAAAGATTAGATGCGTCCTGAAATCCAGCTTTTGTTAC
TGCTGCTTGCTGTTCCAGCGCAATATCTCATCTCAAAATGGATGACCCCT
CAAGCAGCAGACCGAGAATATCTCACAAGACGGATTTTCTCTGACACCTC
AAACGTTTTTCGTAAAGCTTGTGACATCAAAGAATGGGCAAACTATTTGA
attatttgaaagaaagaattttACAGAATTCTGACAATGGTGAATGCCCT
GCAAAGGAAGTAATGCTTTACATGGAGCCCAATGGATATTTCTCAGGCTC
TCCAGAACCAAGGACAGATCGAACCAATGTCAAATATCGAATTGGACAAG
TCATAAAGCATAAGAAATTTGGATATCGTGGTATAATTGTAGGATGGGAT
CCAAAAGCAAGGgcACCTGATTATTGGATACAAGTGAATCATTTCGATCC
GACGTGGAGATATCAACCAAATTATTCAGTACTTGTCGATGCCAGGGATC
GAGAAGACATCCAGACTACTTATGTTGTTGAAGAGAATATCGAAATAGTT
TCCGATACAGAAGTAAAACATCCTGAGACTGACGAATTTTTTGAAGGTTT
TGATGGAGCGCAGTACACTCCACGGCCTTTCCTTAAAGAACTTTACCCTA
AAGATTAGATGCGTCCTGAAATCCAGCTTTTGTTACTGCTGCTTGCTGTT
CCAGCGCAATATCTCATCTCAAAATGGATGACCCCTCAAGCAGCAGACCG
AGAATATCTCACAAGACGGATTTTCTCTGACACCTCAAACGTTTTTCGTA
AAGCTTGTGACATCAAAGAATGGGCAAACTATTTGAattatttgaaagaa
agaattttACAGAATTCTGACAATGGTGAATGCCCTGCAAAGGAAGTAAT
GCTTTACATGGAGCCCAATGGATATTTCTCAGGCTCTCCAGAACCAAGGA
CAGATCGAACCAATGTCAAATATCGAATTGGACAAGTCATAAAGCATAAG
AAATTTGGATATCGTGGTATAATTGTAGGATGGGATCCAAAAGCAAGGgc
ACCTGATTATTGGATACAAGTGAATCATTTCGATCCGACGTGGAGATATC
AACCAAATTATTCAGTACTTGTCGATGCCAGGGATCGAGAAGACATCCAG
ACTACTTATGTTGTTGAAGAGAATATCGAAATAGTTTCCGATACAGAAGT
AAAACATCCTGAGACTGACGAATTTTTTGAAGGTTTTGATGGAGCGCAGT
ACACTCCACGGCCTTTCCTTAAAGAACTTTACCCTAAAGATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062564-exon-scaffold_369-1491911889:316106..316400 | TCONS_00062564-exon-scaffold_369-1491911889:316106..316400 | Clytia hemisphaerica | exon |
| TCONS_00062564-exon-scaffold_369-1510915933:316106..316400 | TCONS_00062564-exon-scaffold_369-1510915933:316106..316400 | Clytia hemisphaerica | exon |
| TCONS_00062564-exon-scaffold_369-1575043694:316106..316400 | TCONS_00062564-exon-scaffold_369-1575043694:316106..316400 | Clytia hemisphaerica | exon |
| TCONS_00062564-exon-scaffold_369-1491911889:319988..320267 | TCONS_00062564-exon-scaffold_369-1491911889:319988..320267 | Clytia hemisphaerica | exon |
| TCONS_00062564-exon-scaffold_369-1510915933:319988..320267 | TCONS_00062564-exon-scaffold_369-1510915933:319988..320267 | Clytia hemisphaerica | exon |
| TCONS_00062564-exon-scaffold_369-1575043694:319988..320267 | TCONS_00062564-exon-scaffold_369-1575043694:319988..320267 | Clytia hemisphaerica | exon |
| TCONS_00062564-exon-scaffold_369-1491911889:323336..323374 | TCONS_00062564-exon-scaffold_369-1491911889:323336..323374 | Clytia hemisphaerica | exon |
| TCONS_00062564-exon-scaffold_369-1510915933:323336..323374 | TCONS_00062564-exon-scaffold_369-1510915933:323336..323374 | Clytia hemisphaerica | exon |
| TCONS_00062564-exon-scaffold_369-1575043694:323336..323374 | TCONS_00062564-exon-scaffold_369-1575043694:323336..323374 | Clytia hemisphaerica | exon |
| TCONS_00062564-exon-scaffold_369-1491911889:326206..326446 | TCONS_00062564-exon-scaffold_369-1491911889:326206..326446 | Clytia hemisphaerica | exon |
| TCONS_00062564-exon-scaffold_369-1510915933:326206..326446 | TCONS_00062564-exon-scaffold_369-1510915933:326206..326446 | Clytia hemisphaerica | exon |
| TCONS_00062564-exon-scaffold_369-1575043694:326206..326446 | TCONS_00062564-exon-scaffold_369-1575043694:326206..326446 | Clytia hemisphaerica | exon |
| TCONS_00062564-exon-scaffold_369-1491911889:326506..327244 | TCONS_00062564-exon-scaffold_369-1491911889:326506..327244 | Clytia hemisphaerica | exon |
| TCONS_00062564-exon-scaffold_369-1510915933:326506..327244 | TCONS_00062564-exon-scaffold_369-1510915933:326506..327244 | Clytia hemisphaerica | exon |
| TCONS_00062564-exon-scaffold_369-1575043694:326506..327244 | TCONS_00062564-exon-scaffold_369-1575043694:326506..327244 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_369 | supercontig | scaffold_369:316106..327244 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR011722 | Hemimethylated_DNA-bd_dom |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003677 |
DNA binding |
Blast
The following BLAST results are available for this feature:
|
