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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00062565 ID=TCONS_00062565|Name=TCONS_00062565|organism=Clytia hemisphaerica|type=transcript|length=1461bp
CTTTAATCTAATCCATCTAAATCTATTTTTTGTCTATATAATGAATATGA
GATTGTGACTGTTAAACCTTTATTGAAGTATTTTAATTAATTTCGCGACT
TCTATGAGTAGTATTTGATTTGATATTCGATATTGTCTAAGCTTGTGTTT
TTGTGATCTGAATTTATATTTTGAAGGGCGAGTCAGGCTTCAAGTTCAAT
TGAGtttaacttttttcaatatGGCAGAGCAAGAAATTACCGCAACAGAA
ATCAAGGATGAAACTCTTGAAGAATATTACGAGCAATCCATCGTTCCACC
ATTCCACAGATGCTATCACATCAAGCCTTTTAATGTTGTTTTCTCAAAGA
ATTACCCCAGACATCATCAGTttattcaagattttgaagtttttaaagaT
GATGTTTTCGTATCCACTTTTCCAAAATCTGGAACTCGTTGGCTTCAAGA
ATTAATTTGGTGTATGCGTCATAAAAATGGAATCGAAAAAGCGAAATCCA
AAGATCTTGATGAGAGGGTACCCCATTTTGAACTCCCTTTTGTAATGGAC
AGCAAGTCTATTGAAGAGGATAAATCATACCTCCTTAATGGAATAAACAA
CCTCTCTCGACCAAGAACGTTGAAAACTCATCTACCTTTTCCGATGCTAC
CGAAAGGAGTACAAGAGAAGGGTGCtaagATCGTATATTGTTATCGCAAC
CCTAGAGATACAATGTTGTCATTGTTTAACTTCATGAAACTCATACAAAA
TTACACTGGCACAATGGAATTGTATTCCGATGTCTTCCTGAAAGGCCTCA
CACCTTATTACTTACCCTACTTTTCTCAAGTTTTGGGATATTGGAATCGA
CGTTCCCAAGAGAATCTCTTGGTACTATGTTATGAAGAAATGCAGAAAGA
TTTGCCATCAGTTGTTCgaaaaattgcttcatttttggaCATTGAAATGA
CAGATGAAGAAGTTTTGAAATTATGTCATCATACTTCTTTTgatcaaatg
aaaaagaacCCTCATGTCAACGTATTGAAGGGACTAAAAATGTACGACGG
ACAATATTTGAACAAAGGAAAAGTTGGACAATGGAAAGATCACTTCAGTG
AAGAATTGATCCAAAAATTCGAACTATTTGAAAGAGAAGGATTAAAGGGA
ACTGATCTGGAGTTTGTTTTCGAATTATAAACCGGCAAATCGGCAGTTTT
TTAACAAGAGCagcgtcaaaatttgaaattacgaTTATCTatgatgattc
tatcaaaagttattggaatttcaattttcatgacgtcatcaaaatagcgc
aaaattgaggatttttgcgaattacgcaaaatatcaaaatgaaaaaaaca
tctgcctagactgaatcttattctaCTTAGTTCTACCAACgacttaataa
aatagatagaccaagaacttcatacaatggctcttagaaatcttttgttt
tctattcattt Run BLAST on NCBI protein sequence of TCONS_00062565-protein >TCONS_00062565-protein ID=TCONS_00062565-protein|Name=TCONS_00062565-protein|organism=Clytia hemisphaerica|type=polypeptide|length=319bp
MAEQEITATEIKDETLEEYYEQSIVPPFHRCYHIKPFNVVFSKNYPRHHQ
FIQDFEVFKDDVFVSTFPKSGTRWLQELIWCMRHKNGIEKAKSKDLDERV
PHFELPFVMDSKSIEEDKSYLLNGINNLSRPRTLKTHLPFPMLPKGVQEK
GAKIVYCYRNPRDTMLSLFNFMKLIQNYTGTMELYSDVFLKGLTPYYLPY
FSQVLGYWNRRSQENLLVLCYEEMQKDLPSVVRKIASFLDIEMTDEEVLK
LCHHTSFDQMKKNPHVNVLKGLKMYDGQYLNKGKVGQWKDHFSEELIQKF
ELFEREGLKGTDLEFVFEL Run BLAST on NCBI transcript from alignment at scaffold_369:327398..330965+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00062565 ID=TCONS_00062565|Name=TCONS_00062565|organism=Clytia hemisphaerica|type=transcript|length=3568bp|location=Sequence derived from alignment at scaffold_369:327398..330965+ (Clytia hemisphaerica)
CTTTAATCTAATCCATCTAAATCTATTTTTTGTCTATATAATGAATATGA
GATTGTGACTGTTAAACCTTTATTGAAGTATTTTAATTAATTTCGCGACT
TCTATGAGTAGTATTTGATTTGATATTCGATATTGTCTAAGCTTGTGTTT
TTGTGATCTGAATTTATATTTTGAAGGGCGAGTCAGGCTTCAAGTTCAAT
TGAGtttaacttttttcaatatGGCAGAGCAAGAAATTACCGCAACAGAA
ATCAAGGATGAAACTCTTGAAGAATATTACGAGCAATCCATCGTTCCACC
ATTCCACAGATGCTATCACATCAAGCCTTTTAATGTTGTTTTCTCAAAGA
ATTACCCCAGACATCATCAGTttattcaagattttgaagtttttaaagaT
GATGTTTTCGTATCCACTTTTCCAAAATCTGGTAATTTTTGTGAACTGCC
AGAATTCCTATGAATCGTTTTGTTTTAAGGCATGCGGAGGTTTATTTTGT
CCTACTATCAACCATTATTTTCTTTCCATGTATTAGCTTTCAAATCCATA
CATTAGGTCACAGTAGGTCAATGAAATACAGTctacgttcgttcgttcgt
tcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttc
gttcgttcgttcgttcgttcgttcgttcgttcgttcttgatattcatgat
gtaatctttgcgCCTAAACAACTTTGCCGCCattatttgtggtaaaaaat
ttgGCCAGCTAACctattttgtattgaaaccGGGGGTTCACGAAAAAGAA
AGCCTAATAATTTGTGATGTAGTATGATAGAATTatatatctttttaaaa
tctattGTAGATAATTTAATGAAAGagttttttcttcgttttggAGTATT
TGGACTTCTGCAttaatcttttcctttttctttcggGGGTCCTTGCGTTG
AAAACACCAAAAATGGCGGCCAAATGTTATGACTTGAAGTGTCAATCAAC
GAAAATATTACATCATGAACATCGtgaattcattcattcattcattctca
AAATTTGATAATACTTCATCATCACTTTCTACACGCATTTTTGTTTTCAG
GAACTCGTTGGCTTCAAGAATTAATTTGGTGTATGCGTCATAAAAATGGA
ATCGAAAAAGCGAAATCCAAAGATCTTGATGAGAGGGTACCCCATTTTGA
GTAAGCCAGATTTCATAATATTATGATAAGACTACAATTATACAACATCA
TTTCTAGCATTGATTTCAAACCCCCAAAGAGACTATAGATTTGAAACTCT
tgaatgggaaatgaagccacttatctCCCACAAACGCCAGATTAAGAGTA
AAACCCATcggtaaatttcaaaaataattgccgcttaaaacaaagaaagg
gcTTGATTCAATCGTCATTCTAAATGCTGTGAAAATCTAAAGGCTTCACT
TTCTCTTGCTccagaaaggttgaagattcctctctggCCTCTTTAGATTC
AATGATTTCAAGACACCAAAATTATTATCAGTGGGTCATTACTTCCGCAG
AGCTTTTTGGAATGATTCAAGTTTTCTGACGTTACTGCTTTTTTTCATTT
AGACTCCCTTTTGTAATGGACAGCAAGTCTATTGAAGAGGATAAATCATA
CCTCCTTAATGGAATAAACAACCTCTCTCGACCAAGAACGTTGAAAACTC
ATCTACCTTTTCCGATGCTACCGAAAGGAGTACAAGAGAAGGGTGCtaag
gtaaattttattgacttatcaaattccaaacattttccttgaaaaaatcA
GCTAAGGCAGGCTCCAAAATTCATTTCTTTCGTGGTTTTAAGCTCAATAA
TCCTTGCAATCTTTTAAACATGTTTGCTTAATGCACGTGTCGAATTCCCT
TAGCCATGCCATCTCTGAAATCCGAGTCCGAGTCGTGTTCTTAAGTTTTC
TTTAAGccgatttcttataaaaagaggcGTGTATTGACAATTCATTGATT
GGAATAATTTTGTTTCATCTTCAGATCGTATATTGTTATCGCAACCCTAG
AGATACAATGTTGTCATTGTTTAACTTCATGAAACTCATACAAAATTACA
CTGGCACAATGGAATTGTATTCCGATGTCTTCCTGAAAGGCCTCACACCT
TATTACTTACCCTACTTTTCTCAAGTTTTGGGATATTGGAATCGACGTTC
CCAAGAGAATCTCTTGGTACTATGTTATGAAGAAATGCAGAAAGATTTGC
CATCAGTTGTTCgaaaaattgcttcatttttggaCATTGAAATGACAGAT
GAAGAAGTTTTGAAATTATGTCATCATACTTCTTTTgatcaaatgaaaaa
gaacCCTCATGTCAACGTATTGAAGGTATTTTTTTGTAAAGGCGAATTGT
TTTGTGTATTTATATAGcagattttctaaactttttaaacgcattactct
cgggtacctaatagccggggggttggaataagcaggggggttggaaaaaa
tctcaaaatttaataagcgggggggttggaataaaaatgtcatggatgga
aaatgtttgaaaaggaggctaatacagcagaattaagacaaaaaagggaa
cttttcccaaaaattaataagcgggggggggggttggaataagaatgtcc
tggggggaaaattttcgaaaaattaaNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaaattaattagca
gggggggacggctattaggtacccgagagtagttgcATATTCCCGTAGTT
TGAATCGcagactttaaaaaaaaatttgtctctaaaaatatttttcgcta
gaggatgaacAGAAGCCTAACTTTCCCGGGGCCCTTAGAGACAGTCATGT
CCTATAGAATTATAGACTTGGTATAAACCTACTTTGGCCCAGAAGATTTT
CCTTTTAgatcacacccctgtctcggtgACTTAGTAGTGGGGTTAAAACG
AAAGGGACTTATTCAGATAGCAATGGTAAGATCGTATCGTGTAAAGAAAC
ATTAGAAACATTTAGAAGTTTCTTTTCTTAATTCTAGGGACTAAAAATGT
ACGACGGACAATATTTGAACAAAGGAAAAGTTGGACAATGGAAAGATCAC
TTCAGTGAAGAATTGATCCAAAAATTCGAACTATTTGAAAGAGAAGGATT
AAAGGGAACTGATCTGGAGTTTGTTTTCGAATTATAAACCGGCAAATCGG
CAGTTTTTTAACAAGAGCagcgtcaaaatttgaaattacgaTTATCTatg
atgattctatcaaaagttattggaatttcaattttcatgacgtcatcaaa
atagcgcaaaattgaggatttttgcgaattacgcaaaatatcaaaatgaa
aaaaacatctgcctagactgaatcttattctaCTTAGTTCTACCAACgac
ttaataaaatagatagaccaagaacttcatacaatggctcttagaaatct
tttgttttctattcattt Coding sequence (CDS) from alignment at scaffold_369:327398..330965+ >TCONS_00062565 ID=TCONS_00062565|Name=TCONS_00062565|organism=Clytia hemisphaerica|type=CDS|length=4800bp|location=Sequence derived from alignment at scaffold_369:327398..330965+ (Clytia hemisphaerica)
atGGCAGAGCAAGAAATTACCGCAACAGAAATCAAGGATGAAACTCTTGA
AGAATATTACGAGCAATCCATCGTTCCACCATTCCACAGATGCTATCACA
TCAAGCCTTTTAATGTTGTTTTCTCAAAGAATTACCCCAGACATCATCAG
TttattcaagattttgaagtttttaaagaTGATGTTTTCGTATCCACTTT
TCCAAAATCTGGAACTCGTTGGCTTCAAGAATTAATTTGGTGTATGCGTC
ATAAAAATGGAATCGAAAAAGCGAAATCCAAAGATCTTGATGAGAGGGTA
CCCCATTTTGAACTCCCTTTTGTAATGGACAGCAAGTCTATTGAAGAGGA
TAAATCATACCTCCTTAATGGAATAAACAACCTCTCTCGACCAAGAACGT
TGAAAACTCATCTACCTTTTCCGATGCTACCGAAAGGAGTACAAGAGAAG
GGTGCtaagATCGTATATTGTTATCGCAACCCTAGAGATACAATGTTGTC
ATTGTTTAACTTCATGAAACTCATACAAAATTACACTGGCACAATGGAAT
TGTATTCCGATGTCTTCCTGAAAGGCCTCACACCTTATTACTTACCCTAC
TTTTCTCAAGTTTTGGGATATTGGAATCGACGTTCCCAAGAGAATCTCTT
GGTACTATGTTATGAAGAAATGCAGAAAGATTTGCCATCAGTTGTTCgaa
aaattgcttcatttttggaCATTGAAATGACAGATGAAGAAGTTTTGAAA
TTATGTCATCATACTTCTTTTgatcaaatgaaaaagaacCCTCATGTCAA
CGTATTGAAGGGACTAAAAATGTACGACGGACAATATTTGAACAAAGGAA
AAGTTGGACAATGGAAAGATCACTTCAGTGAAGAATTGATCCAAAAATTC
GAACTATTTGAAAGAGAAGGATTAAAGGGAACTGATCTGGAGTTTGTTTT
CGAATTATAAatGGCAGAGCAAGAAATTACCGCAACAGAAATCAAGGATG
AAACTCTTGAAGAATATTACGAGCAATCCATCGTTCCACCATTCCACAGA
TGCTATCACATCAAGCCTTTTAATGTTGTTTTCTCAAAGAATTACCCCAG
ACATCATCAGTttattcaagattttgaagtttttaaagaTGATGTTTTCG
TATCCACTTTTCCAAAATCTGGAACTCGTTGGCTTCAAGAATTAATTTGG
TGTATGCGTCATAAAAATGGAATCGAAAAAGCGAAATCCAAAGATCTTGA
TGAGAGGGTACCCCATTTTGAACTCCCTTTTGTAATGGACAGCAAGTCTA
TTGAAGAGGATAAATCATACCTCCTTAATGGAATAAACAACCTCTCTCGA
CCAAGAACGTTGAAAACTCATCTACCTTTTCCGATGCTACCGAAAGGAGT
ACAAGAGAAGGGTGCtaagATCGTATATTGTTATCGCAACCCTAGAGATA
CAATGTTGTCATTGTTTAACTTCATGAAACTCATACAAAATTACACTGGC
ACAATGGAATTGTATTCCGATGTCTTCCTGAAAGGCCTCACACCTTATTA
CTTACCCTACTTTTCTCAAGTTTTGGGATATTGGAATCGACGTTCCCAAG
AGAATCTCTTGGTACTATGTTATGAAGAAATGCAGAAAGATTTGCCATCA
GTTGTTCgaaaaattgcttcatttttggaCATTGAAATGACAGATGAAGA
AGTTTTGAAATTATGTCATCATACTTCTTTTgatcaaatgaaaaagaacC
CTCATGTCAACGTATTGAAGGGACTAAAAATGTACGACGGACAATATTTG
AACAAAGGAAAAGTTGGACAATGGAAAGATCACTTCAGTGAAGAATTGAT
CCAAAAATTCGAACTATTTGAAAGAGAAGGATTAAAGGGAACTGATCTGG
AGTTTGTTTTCGAATTATAAatGGCAGAGCAAGAAATTACCGCAACAGAA
ATCAAGGATGAAACTCTTGAAGAATATTACGAGCAATCCATCGTTCCACC
ATTCCACAGATGCTATCACATCAAGCCTTTTAATGTTGTTTTCTCAAAGA
ATTACCCCAGACATCATCAGTttattcaagattttgaagtttttaaagaT
GATGTTTTCGTATCCACTTTTCCAAAATCTGGAACTCGTTGGCTTCAAGA
ATTAATTTGGTGTATGCGTCATAAAAATGGAATCGAAAAAGCGAAATCCA
AAGATCTTGATGAGAGGGTACCCCATTTTGAACTCCCTTTTGTAATGGAC
AGCAAGTCTATTGAAGAGGATAAATCATACCTCCTTAATGGAATAAACAA
CCTCTCTCGACCAAGAACGTTGAAAACTCATCTACCTTTTCCGATGCTAC
CGAAAGGAGTACAAGAGAAGGGTGCtaagATCGTATATTGTTATCGCAAC
CCTAGAGATACAATGTTGTCATTGTTTAACTTCATGAAACTCATACAAAA
TTACACTGGCACAATGGAATTGTATTCCGATGTCTTCCTGAAAGGCCTCA
CACCTTATTACTTACCCTACTTTTCTCAAGTTTTGGGATATTGGAATCGA
CGTTCCCAAGAGAATCTCTTGGTACTATGTTATGAAGAAATGCAGAAAGA
TTTGCCATCAGTTGTTCgaaaaattgcttcatttttggaCATTGAAATGA
CAGATGAAGAAGTTTTGAAATTATGTCATCATACTTCTTTTgatcaaatg
aaaaagaacCCTCATGTCAACGTATTGAAGGGACTAAAAATGTACGACGG
ACAATATTTGAACAAAGGAAAAGTTGGACAATGGAAAGATCACTTCAGTG
AAGAATTGATCCAAAAATTCGAACTATTTGAAAGAGAAGGATTAAAGGGA
ACTGATCTGGAGTTTGTTTTCGAATTATAAatGGCAGAGCAAGAAATTAC
CGCAACAGAAATCAAGGATGAAACTCTTGAAGAATATTACGAGCAATCCA
TCGTTCCACCATTCCACAGATGCTATCACATCAAGCCTTTTAATGTTGTT
TTCTCAAAGAATTACCCCAGACATCATCAGTttattcaagattttgaagt
ttttaaagaTGATGTTTTCGTATCCACTTTTCCAAAATCTGGAACTCGTT
GGCTTCAAGAATTAATTTGGTGTATGCGTCATAAAAATGGAATCGAAAAA
GCGAAATCCAAAGATCTTGATGAGAGGGTACCCCATTTTGAACTCCCTTT
TGTAATGGACAGCAAGTCTATTGAAGAGGATAAATCATACCTCCTTAATG
GAATAAACAACCTCTCTCGACCAAGAACGTTGAAAACTCATCTACCTTTT
CCGATGCTACCGAAAGGAGTACAAGAGAAGGGTGCtaagATCGTATATTG
TTATCGCAACCCTAGAGATACAATGTTGTCATTGTTTAACTTCATGAAAC
TCATACAAAATTACACTGGCACAATGGAATTGTATTCCGATGTCTTCCTG
AAAGGCCTCACACCTTATTACTTACCCTACTTTTCTCAAGTTTTGGGATA
TTGGAATCGACGTTCCCAAGAGAATCTCTTGGTACTATGTTATGAAGAAA
TGCAGAAAGATTTGCCATCAGTTGTTCgaaaaattgcttcatttttggaC
ATTGAAATGACAGATGAAGAAGTTTTGAAATTATGTCATCATACTTCTTT
TgatcaaatgaaaaagaacCCTCATGTCAACGTATTGAAGGGACTAAAAA
TGTACGACGGACAATATTTGAACAAAGGAAAAGTTGGACAATGGAAAGAT
CACTTCAGTGAAGAATTGATCCAAAAATTCGAACTATTTGAAAGAGAAGG
ATTAAAGGGAACTGATCTGGAGTTTGTTTTCGAATTATAAatGGCAGAGC
AAGAAATTACCGCAACAGAAATCAAGGATGAAACTCTTGAAGAATATTAC
GAGCAATCCATCGTTCCACCATTCCACAGATGCTATCACATCAAGCCTTT
TAATGTTGTTTTCTCAAAGAATTACCCCAGACATCATCAGTttattcaag
attttgaagtttttaaagaTGATGTTTTCGTATCCACTTTTCCAAAATCT
GGAACTCGTTGGCTTCAAGAATTAATTTGGTGTATGCGTCATAAAAATGG
AATCGAAAAAGCGAAATCCAAAGATCTTGATGAGAGGGTACCCCATTTTG
AACTCCCTTTTGTAATGGACAGCAAGTCTATTGAAGAGGATAAATCATAC
CTCCTTAATGGAATAAACAACCTCTCTCGACCAAGAACGTTGAAAACTCA
TCTACCTTTTCCGATGCTACCGAAAGGAGTACAAGAGAAGGGTGCtaagA
TCGTATATTGTTATCGCAACCCTAGAGATACAATGTTGTCATTGTTTAAC
TTCATGAAACTCATACAAAATTACACTGGCACAATGGAATTGTATTCCGA
TGTCTTCCTGAAAGGCCTCACACCTTATTACTTACCCTACTTTTCTCAAG
TTTTGGGATATTGGAATCGACGTTCCCAAGAGAATCTCTTGGTACTATGT
TATGAAGAAATGCAGAAAGATTTGCCATCAGTTGTTCgaaaaattgcttc
atttttggaCATTGAAATGACAGATGAAGAAGTTTTGAAATTATGTCATC
ATACTTCTTTTgatcaaatgaaaaagaacCCTCATGTCAACGTATTGAAG
GGACTAAAAATGTACGACGGACAATATTTGAACAAAGGAAAAGTTGGACA
ATGGAAAGATCACTTCAGTGAAGAATTGATCCAAAAATTCGAACTATTTG
AAAGAGAAGGATTAAAGGGAACTGATCTGGAGTTTGTTTTCGAATTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00062565-exon-scaffold_369-1491911889:327398..327828 | TCONS_00062565-exon-scaffold_369-1491911889:327398..327828 | Clytia hemisphaerica | exon |
| TCONS_00062565-exon-scaffold_369-1510915933:327398..327828 | TCONS_00062565-exon-scaffold_369-1510915933:327398..327828 | Clytia hemisphaerica | exon |
| TCONS_00062565-exon-scaffold_369-1575043694:327398..327828 | TCONS_00062565-exon-scaffold_369-1575043694:327398..327828 | Clytia hemisphaerica | exon |
| TCONS_00062565-exon-scaffold_369-1491911889:328498..328597 | TCONS_00062565-exon-scaffold_369-1491911889:328498..328597 | Clytia hemisphaerica | exon |
| TCONS_00062565-exon-scaffold_369-1510915933:328498..328597 | TCONS_00062565-exon-scaffold_369-1510915933:328498..328597 | Clytia hemisphaerica | exon |
| TCONS_00062565-exon-scaffold_369-1575043694:328498..328597 | TCONS_00062565-exon-scaffold_369-1575043694:328498..328597 | Clytia hemisphaerica | exon |
| TCONS_00062565-exon-scaffold_369-1491911889:329000..329147 | TCONS_00062565-exon-scaffold_369-1491911889:329000..329147 | Clytia hemisphaerica | exon |
| TCONS_00062565-exon-scaffold_369-1510915933:329000..329147 | TCONS_00062565-exon-scaffold_369-1510915933:329000..329147 | Clytia hemisphaerica | exon |
| TCONS_00062565-exon-scaffold_369-1575043694:329000..329147 | TCONS_00062565-exon-scaffold_369-1575043694:329000..329147 | Clytia hemisphaerica | exon |
| TCONS_00062565-exon-scaffold_369-1491911889:329422..329772 | TCONS_00062565-exon-scaffold_369-1491911889:329422..329772 | Clytia hemisphaerica | exon |
| TCONS_00062565-exon-scaffold_369-1510915933:329422..329772 | TCONS_00062565-exon-scaffold_369-1510915933:329422..329772 | Clytia hemisphaerica | exon |
| TCONS_00062565-exon-scaffold_369-1575043694:329422..329772 | TCONS_00062565-exon-scaffold_369-1575043694:329422..329772 | Clytia hemisphaerica | exon |
| TCONS_00062565-exon-scaffold_369-1491911889:330535..330965 | TCONS_00062565-exon-scaffold_369-1491911889:330535..330965 | Clytia hemisphaerica | exon |
| TCONS_00062565-exon-scaffold_369-1510915933:330535..330965 | TCONS_00062565-exon-scaffold_369-1510915933:330535..330965 | Clytia hemisphaerica | exon |
| TCONS_00062565-exon-scaffold_369-1575043694:330535..330965 | TCONS_00062565-exon-scaffold_369-1575043694:330535..330965 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_369 | supercontig | scaffold_369:327398..330965 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008146 | sulfotransferase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0008146 |
sulfotransferase activity |
Blast
BLAST of TCONS_00062565 vs. Swiss-Prot (Human)
Match: ST1C4 (Sulfotransferase 1C4 OS=Homo sapiens GN=SULT1C4 PE=1 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 8.911e-43 Identity = 87/274 (31.75%), Postives = 150/274 (54.74%), Query Frame = 2
Query: 374 IQDFEVFKDDVFVSTFPKSGTRWLQELIWCMRHKNGIEKAKSKDLDERVPHFELPFVMDSKSIEEDKSYLLNGINNLSRPRTLKTHLPFPMLPKGVQEKGAKIVYCYRNPRDTMLSLFNFMKLIQN--YTGTMELYSDVFLKGLTPYYLPYFSQVLGYWNRRSQENLLVLCYEEMQKDLPSVVRKIASFLDIEMTDEEVLKLCHHTSFDQMKKNPHVNV----LKGLKMYDGQYLNKGKVGQWKDHFSEELIQKFELFEREGLKGTDLEFVFEL 1177
I +F+ DD+ +ST+PK+GT W QE++ ++++ +EK+K +R P E+ +E+ + + PR LKTHLPF +LP + EK KI+Y RNP+D M+S ++F ++ + GT E Y + FL G + + V G+W + + +L L YE+M+K+ ++K+A F+ ++ D+ + K+ H+TSFD MK+NP N + + ++ KG VG WK HF+ ++F+ ++ + T L F F+
Sbjct: 38 IWNFQAKPDDLLISTYPKAGTTWTQEIVELIQNEGDVEKSKRAPTHQRFPFLEMKIPSLGSGLEQ--------AHAMPSPRILKTHLPFHLLPPSLLEKNCKIIYVARNPKDNMVSYYHFQRMNKALPAPGTWEEYFETFLAGKV-CWGSWHEHVKGWWEAKDKHRILYLFYEDMKKNPKHEIQKLAEFIGKKLDDKVLDKIVHYTSFDVMKQNPMANYSSIPAEIMDHSISPFMRKGAVGDWKKHFTVAQNERFDEDYKKKMTDTRLTFHFQF 302
The following BLAST results are available for this feature:
|
