TCONS_00062574 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062574
Unique NameTCONS_00062574
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3368

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062574 ID=TCONS_00062574|Name=TCONS_00062574|organism=Clytia hemisphaerica|type=transcript|length=3368bp
TACCTTTCTTGGGTTTTCCGCTTCCTTTCATATTTTTAGGTTTTCGATCA
TGTGCTCTATCTTTAGCTGACTTGACAACAACACCATAAAGCTCCTTTTG
TTTGTCAGAAGAGGGATGGTGACTCTCACTTTTACTTCTTGTTCTGGAGG
ACTTCTTGAGGTTGTTGATAGCTCCATTTGTCAGTTGATTACGGTCTGCA
AGGCTTGTTGCCTGCATCATTTCACTTGATGCTGTAGGGGTCAGTTTAGG
ATGCTCTGCCATCTTGGGAAGGAAGGAGTAACACTGGCTAACGGTGGTGG
GCAAGGGATATTCAAAATTTAGTGTCCAACTTCCAGCCTTCGagttaTGC
TGGAATGCACGTCCTTTCAGGGGGTATTTTGGGGAGGTATTTGGTGACTT
CACACAAAGTAACACTTGATTTCTTCATACAATCGCCAATAACTTTAAAA
ACTATAACAAACCAACGTTTTCACTGATATTTCAAGgtttaaaattataa
ataataaacaaaatagTATAGTTTTGCAAAAAGCTCTCAGCTCATGGACG
TGTCTTGTTTACTTCTTTAGCGATTTGGTCACGTGGTCTCGCTTTTGTGG
AAACGAGATCCCGCGTGTTCAGAATTCGAGTCCCGCGTTTAGCACTCTCC
TTCTTAGATTTTATTGGTGATGATACCTATTTTAAGGACATTTTCATCTC
TTATAATAGTAGAATATTAAGAATAATTATGACTAATTAGCTTACATCTA
ACGAATTCAACTCGACTTTATCagtttctaattttttcaaaacccatTTT
CGATCTAGAAATAGAACAAAACATTAAAAGGCTAAACGACGGAGAGATGA
ACTCCGTCAGTGACGTCATACAGGAAAGTAAATAATTAATCGATATTGAC
GTCACATTTTATTGAAcatgcaaaatcaaaacaaaacaagattttAGAAA
GTCGAAAGATGGAGAAAGATACAGGAAGGATTGTGCCGATCTACCAACAA
ATTCCTCCACGGAAAAATCTCCTTGAGCGGAGCCGCCGAAAGAAGGTTCC
CATAATTCATGAATCGCCGCCTTCAGAACTTCCCTTATTCATAAGGAAAA
AGTATCCACATCAGCAGCATGCTAGTAATTCTGGAGAAAAAGTCAAtaca
ttttcaaaacatgataATCGACACTCGTTACAAGACAAAGGTGAATATTT
TGGTCAGGGGCTAggaaaaagatattttaaagaaaTCAACCATCACCATA
GAAAGACACAATTTAAAATATCAACACCTGAATCTCAACAAAATCGTTTA
GAAGAACAAAAAGATAAACATTCTGATTCAAAAACACCACAAGTCATCAC
ACACCATCGTAGATTTCCAAGACAATATAACAAACCATCACCAAATAGTA
CAATTCCTACTGACACAACAAGTTGGTGGCCATCAACAGACAGTTATCGT
ACACCAACTCAAGTTTTAACTATAACTCAAACCATTCCAGGGCAAGCTAA
CTCATGGCGTTATTCCTATAAATCAACCATCTTTCCATCGATAGCGACCA
GAGATGGTTGTCATGGTAATCACCATAGAACGAATCCAATCCTGGCTTCA
ACTTGCTGACGAGATTTTCTGTGatgttttattttaaatctGTAAAACAA
AGTAAAAACATGATTAATGgctagaaaatatattttcgatTCAACTGAAT
TCTACGACGCATGATTTTCATTGAAGAGCTTCCTCTTGCTGGTTTTACGT
ATTACAATTCAtcaagatattttgaaaatcaagtgactcaaaaatataat
aaattttcaatgaCAAGTAACACCTTGAGGCTGATTCAGGGTTGCATATT
TCTATAAGAGTGCATACAGAATGCGGATCTACAAAAGCAGACACTGTTAC
GTACAAACATAAAATAGGTTTGACACTTTTTCCTGTTGAGTTATTTGTAC
AAGGATTTCAACTTCGAagagaatttttgtttttaaatttaataaaGCTG
ATCTATAATGTACACAGAATTCAAAATTACTTAAAAGATTTGGAGATAGA
AGAGCTGGAAAAATCTATCCCTTCTTTCTCCCTTTCTCTCTTATTTATAA
ATTTCAACTTAAGCCTTGATAAAAAATTGAGTCtacatttacaaaaatat
tacgTTTAGAACAAAATGTGCTTGCTTTGGTATTTACTTTACAAAACAGC
TGAATTAGTAATAATTGTCCCTAACTTGGTAGTGCTGTTTTTAAGAATct
atttgtgcaaaaagtcaCAATAATCACATGGTCAGATTATGCTAGCAAAA
GTAAAGTAAAAACCCTGCCAAATTTGATTGACATAAGGATCTCTGTAACC
TTCAAACATCAGTTATATCTAGGGTTTTATCTAAAATCACACATATGGAA
AATTCTCCCTAACATTCTACCATAACTAAGGATTAATGGTTTTTTctaga
taaaaatagaaaaaaactgtttttcgaTCAACAAAATCTGAAAAGAAACA
CAAATGcaaaaacatattttgatattattgaagcataaattatataaaac
gAAATCATTCAATGTCATAAATAAAATCGGACTACTTAGGGAACATCTCT
CGAGCTCTACTAATTCTAAGAGAGATCTTTATGGAAATCTTTTCCAAGCT
GTTATCAACTATTCCACATGGAATCCGGCTAATGGATGATTCGCCATACC
CTGAAAAGGACTACATTTTCTATCATGAGCGTCTCTGCGAGTCTGTTGAA
CCAAACAGCCATTTCAAGCAGTAGAGAGAATGCGACCACTCTTACTCCGA
TCAGATTAACACTAAACCACCATCACATTAATGGACACACATACATAACA
ACAACCAGATCCAAGCCTGCTAAGATACGGATTCATCAGAACGACTATTT
CTAGAAGTCTCGTCAGACGTCATTGATTCTGCTGCTCTCTGTTTTGACAG
TCTCGCCCTTTCAGCACAAAAACCATCACTAGCACTAGCCTCAGAAGAGC
CTGTGGCAGAAGCTAATAATGGTTCACTAGCCGCAGCACCAACATCATTA
TTCTCAACAACAAGTCCTTGGTTTATTGAAGTCCTTTTCACAACAATTTC
ATCCTTATCCTGGCCATCTTGGTCTTTCGCCATACAATCTTCGTCCAGTC
CGCCTTGTTTTGTAGATATATCACATTCAGATTGTTCGTTTTCTTTATTG
TCCTTTTTAGAGTTGTCTGAGCGCCGTTTCACACTGGTTGACAGGTTTAG
ACTGTTAAATTCAGGTGATAATAAAGAGTAAACAAGTTCTTTGGTAAATA
ATTCACGATTCTGTCGCTCGTGTAGTTTTTCCTTTGATTCCTCTGCTTTT
GAGATTTCTTTGTAATGC
Run BLAST on NCBI

protein sequence of TCONS_00062574-protein

>TCONS_00062574-protein ID=TCONS_00062574-protein|Name=TCONS_00062574-protein|organism=Clytia hemisphaerica|type=polypeptide|length=216bp
MEKDTGRIVPIYQQIPPRKNLLERSRRKKVPIIHESPPSELPLFIRKKYP
HQQHASNSGEKVNTFSKHDNRHSLQDKGEYFGQGLGKRYFKEINHHHRKT
QFKISTPESQQNRLEEQKDKHSDSKTPQVITHHRRFPRQYNKPSPNSTIP
TDTTSWWPSTDSYRTPTQVLTITQTIPGQANSWRYSYKSTIFPSIATRDG
CHGNHHRTNPILASTC
Run BLAST on NCBI

transcript from alignment at scaffold_369:252585..258931-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062574 ID=TCONS_00062574|Name=TCONS_00062574|organism=Clytia hemisphaerica|type=transcript|length=6347bp|location=Sequence derived from alignment at scaffold_369:252585..258931- (Clytia hemisphaerica)
TACCTTTCTTGGGTTTTCCGCTTCCTTTCATATTTTTAGGTTTTCGATCA TGTGCTCTATCTTTAGCTGACTTGACAACAACACCATAAAGCTCCTTTTG TTTGTCAGAAGAGGGATGGTGACTCTCACTTTTACTTCTTGTTCTGGAGG ACTTCTTGAGGTTGTTGATAGCTCCATTTGTCAGTTGATTACGGTCTGCA AGGCTTGTTGCCTGCATCATTTCACTTGATGCTGTAGGGGTCAGTTTAGG ATGCTCTGCCATCTTGGGAAGGAAGGAGTAACACTGGCTAACGGTGGTGG GCAAGGGATATTCAAAATTTAGTGTCCAACTTCCAGCCTTCGAGTTAGCG ACTCCAGAAGTCATGCAACTATCGTTGACGTCAAACCAAATGTTTCATTT TTCCGTGAACTTTGAACCCTTCTAACTTTTCTTCTATATATGCTAAAGCG TTCCGGTTTTTACTAAAAGAAAGCCCGTGATCTTAGCTTTCCAGCGGTAT ATAACACTGTGGACACGGGCTAGACGGCAAATTGGTANNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNTTACAACCACTAATCCTCTGGAGGCCTAT GACCCCTCATTTTCTTTCTTTTTCAAAGCTCTACAAGATAGGATAGATTT TGAAAAAAAAATTAAAACTTAAAAAATCTTCTGGAGTTGCTATTCGAGTA GTGCTGGAATGCACGTCCTTTCAGGGGGTATTTTGGGGAGGTATTTGGTG ACTTCACACAAAGTAACACTTGATTTCTTCATACAATCGCCAATAACTTT AAAAACTATAACAAACCAACGTTTTCACTGATATTTCAAGGTTTAAAATT ATAAATAATAAACAAAATAGTATAGTTTTGCAAAAAGCTCTCAGCTCATG GACGTGTCTTGTTTACTTCTTTAGCGATTTGGTCACGTGGTCTCGCTTTT GTGGAAACGAGATCCCGCGTGTTCAGAATTCGAGTCCCGCGTTTAGCACT CTCCTTCTTAGATTTTATTGGTGATGATACCTATTTTAAGGACATTTTCA TCTCTTATAATAGTAGAATATTAAGAATAATTATGACTAATTAGCTTACA TCTAACGAATTCAACTCGACTTTATCAGTTTCTAATTTTTTCAAAACCCA TTTTCGATCTAGAAATAGAACAAAACATTAAAAGGCTAAACGACGGAGAG ATGAACTCCGTCAGTGACGTCATACAGGAAAGTAAATAATTAATCGATAT TGACGTCACATTTTATTGAACATGCAAAATCAAAACAAAACAAGATTTTA GAAAGTCGAAAGATGGAGAAAGATACAGGAAGGATTGTGCCGATCTACCA ACAAATTGTATGCTATTTTCATTCTGCTCTCTTCAGGAAATACTTTACTA GCAAACGACCATCTTCGTAATAGCGTACGAGCCTTTTCGGGTTCAGTCCA GCCCACTATAAAGAATGCCGAATTCAACGACATGTAGTGTCGACGTCGGT TGCCTAACACAGCAGGGGAAAATTAACCGCTGCAAAGATTGCATTATATG CAGTGCCAGACAAAATGATCATCAAACTGAGATTTGGCCGAACGAGATTT ATACGAAACATATAATCACAGCTCCTGTTTTAACTCGTGCCATGTTGAAA TGAATTTTCCTTTTGTTTATTGTCCCCTCTTTAACCTTCAACCTTTAATG GAAAAAGCTTATTTCAACTTAATTGAAAATCAGAAAAAAGTTACAAAATT CTAAATCTTTGCCGTTGACGGCCGACCGATTGCAAGCATTAGCGAGTTTA AGTATTCGAGATAAATCGAGGGGAACGCAAAGTACCACAGCAAAGCTGAC ATGGGGCCGAAATCGAGATACCGTCGTCTGGTCCGCAAAATACGACCGGT ATCCATCTCTAGCTGGCACCAACGACTTACAAATAAACTATTTTGTAAGT CGTTGCTGGCACTCAGCGTTGTTTCAACGTTCGTCTAACATTATACAAAA AGATATATGTGCGTAAGATTGACGCTAACACAAAGTTGTGTGCAAGCTTT TGAAACATTTTCATGTTCATTTTAGCCTCCACGGAAAAATCTCCTTGAGC GGAGCCGCCGAAAGAAGGTTCCCATAATTCATGAATCGCCGCCTTCAGAA CTTCCCTTATTCATAAGGAAAAAGTATCCACATCAACAGCATGTTTTCAA TTCTGGAGAAAAAGGCAATACCTTTTCAAAANAAAGTATCCACATCAGCA GCATGCTAGTAATTCTGGAGAAAAAGTCAATACATTTTCAAAACATGATA ATCGACACTCGTTACAAGACAAAGGTGAATATTTTGGTCAGGTAAGAACT TTGAAATTCACATTTACTTTGATTTATAAGCTGTCCCTAAAAGAGACTTA TTTTCCTTTCTTGTTCCAAATATCAAGAACACTAGACCCAAGTCCAAAGT TTCTCCAACGACTTAATAAAATAGATGGACCAAGAGCTTCATACAATGGC TCTTAGAAATCTTTTGTTTTTTATTCATTTTGTATTCTTTCATCTTGCCG TCTTTCCGCCGTCCGCGTAAGTCATATTACAAAGAAATTAGACTTTTTAC AAGCATCTCTAAATGGTGTAAAATCAATTATATCGAATTTCTACTGAGCA TAAACATAATTTTCGATTTTTTTTGCTTACCGTCAGATCGCATTTTTAAT CATCTTTCTCACAAGATATTTTTCAATATTTTTCGACAACACTGTTGCGC ATTTCAGCGCATTTTCTTTAAGAACATAAACATTTTTGAAAGACTCTAAC TAAGAAAATAAACGTGCGTTCATGGTGCGTTCTTAAGATAGAAAACACGA ACACTATCCAAATACAAATGTTATAATTTTAACAATGTTTACTAATTTTG AAGCCTAAAAGTTTGACTTGAAATTAAGAACATATTCACAAAATTTAGGT CATGTGATCAATATCAACCAATAGCTAATCTTAAAAAAATGCTTTTGCAC GCGGAATGACATTTTAATGATTTTTTATCATTCTTACGCGGATCATTTCA ATAGGATACTGGTTTATCTATTTTATTAGGTCGTTGGTCTCTCTAAGGAT TAGAAAAATCAGAAATTTTTAAATTACTCTCTCTAAGGGTCGGAAAATTC ACGATTTTAGGAAAAATTTTTGATTTCGAGAGAAAAAATTGTAAAAATCG AAGAACATTTTTCATTAAGTCTCTCTAAGGGTCAAGACTAAGGGTCACCT TTACAGTAAAAATAGTATCCCCCATAGAGTCACTGAGTCACTGTTTGATA CGCTAGTTCGGCTTACTATCATTTGTATTTCTGTTCACGTTTCACAATCT TGAGAATAATGTGAAGGAACCTTAACAATTCCTGCATTTCTTTCACAAAC AGGGGCTAGGAAAAAGATATTTTAAAGAAATCAACCATCACCATAGAAAG ACACAATTTAAAATATCAACACCTGAATCTCAACAAAATCGTTTAGAAGA ACAAAAAGATAAACATTCTGATTCAAAAACACCACAAGTCATCACACACC ATCGTAGATTTCCAAGACAATATAACAAACCATCACCAAATAGTACAATT CCTACTGACACAACAAGTTGGTGGCCATCAACAGACAGTTATCGTACACC AACTCAAGTTTTAACTATAACTCAAACCATTCCAGGGCAAGCTAACTCAT GGCGTTATTCCTATAAATCAACCATCTTTCCATCGATAGCGACCAGAGAT GGTTGTCATGGTAATCACCATAGAACGAATCCAATCCTGGCTTCAACTTG CTGACGAGATTTTCTGTGATGTTTTATTTTAAATCTGTAAAACAAAGTAA AAACATGATTAATGGCTAGAAAATATATTTTCGATTCAACTGAATTCTAC GACGCATGATTTTCATTGAAGAGCTTCCTCTTGCTGGTTTTACGTATTAC AATTCATCAAGATATTTTGAAAATCAAGTGACTCAAAAATATAATAAATT TTCAATGACAAGTAACACCTTGAGGCTGATTCAGGGTTGCATATTTCTAT AAGAGTGCATACAGAATGCGGATCTACAAAAGCAGACACTGTTACGTACA AACATAAAATAGGTTTGACACTTTTTCCTGTTGAGTTATTTGTACAAGGA TTTCAACTTCGAAGAGAATTTTTGTTTTTAAATTTAATAAAGCTGATCTA TAATGTACACAGAATTCAAAATTACTTAAAAGATTTGGAGATAGAAGAGC TGGAAAAATCTATCCCTTCTTTCTCCCTTTCTCTCTTATTTATAAATTTC AACTTAAGCCTTGATAAAAAATTGAGTCTACATTTACAAAAATATTACGT TTAGAACAAAATGTGCTTGCTTTGGTATTTACTTTACAAAACAGCTGAAT TAGTAATAATTGTCCCTAACTTGGTAGTGCTGTTTTTAAGAATCTATTTG TGCAAAAAGTCACAATAATCACATGGTCAGATTATGCTAGCAAAAGTAAA GTAAAAACCCTGCCAAATTTGATTGACATAAGGATCTCTGTAACCTTCAA ACATCAGTTATATCTAGGGTTTTATCTAAAATCACACATATGGAAAATTC TCCCTAACATTCTACCATAACTAAGGATTAATGGTTTTTTCTAGATAAAA ATAGAAAAAAACTGTTTTTCGATCAACAAAATCTGAAAAGAAACACAAAT GCAAAAACATATTTTGATATTATTGAAGCATAAATTATATAAAACGAAAT CATTCAATGTCATAAATAAAATCGGACTACTTAGGGAACATCTCTCGAGC TCTACTAATTCTAAGAGAGATCTTTATGGAAATCTTTTCCAAGCTGTTAT CAACTATTCCACATGGAATCCGGCTAATGGATGATTCGCCATACCCTGAA AAGGACTACATTTTCTATCATGAGCGTCTCTGCGAGTCTGTTGAACCAAA CAGCCATTTCAAGCAGTAGAGAGAATGCGACCACTCTTACTCCGATCAGA TTAACACTAAACCACCATCACATTAATGGACACACATACATAACAACAAC CAGATCCAAGCCTGCTAAGATACGGATTCATCAGAACGACTATTTCTAGA AGTCTCGTCAGACGTCATTGATTCTGCTGCTCTCTGTTTTGACAGTCTCG CCCTTTCAGCACAAAAACCATCACTAGCACTAGCCTCAGAAGAGCCTGTG GCAGAAGCTAATAATGGTTCACTAGCCGCAGCACCAACATCATTATTCTC AACAACAAGTCCTTGGTTTATTGAAGTCCTTTTCACAACAATTTCATCCT TATCCTGGCCATCTTGGTCTTTCGCCATACAATCTTCGTCCAGTCCGCCT TGTTTTGTAGATATATCACATTCAGATTGTTCGTTTTCTTTATTGTCCTT TTTAGAGTNAATGCCATCTTCGTCCAGTCCGCCTTCTTTCGTAGACATAT CACATTCAGATTGTTCGTTTTCTTTATTGTCCTTTTTAGAGTTGTCTGAG CGCCGTTTCACACTGGTTGACAGGTTTAGACTGTTAAATTCAGGTGATAA TAAAGAGTAAACAAGTTCTTTGGTAAATAATTCACGATTCTGTCGCTCGT GTAGTTTTTCCTTTGATTCCTCTGCTTTTGAGATTTCTTTGTAATGC

Coding sequence (CDS) from alignment at scaffold_369:252585..258931-

>TCONS_00062574 ID=TCONS_00062574|Name=TCONS_00062574|organism=Clytia hemisphaerica|type=CDS|length=2604bp|location=Sequence derived from alignment at scaffold_369:252585..258931- (Clytia hemisphaerica)
GGGCTAGGAAAAAGATATTTTAAAGAAATCAACCATCACCATAGAAAGAC
ACAATTTAAAATATCAACACCTGAATCTCAACAAAATCGTTTAGAAGAAC
AAAAAGATAAACATTCTGATTCAAAAACACCACAAGTCATCACACACCAT
CGTAGATTTCCAAGACAATATAACAAACCATCACCAAATAGTACAATTCC
TACTGACACAACAAGTTGGTGGCCATCAACAGACAGTTATCGTACACCAA
CTCAAGTTTTAACTATAACTCAAACCATTCCAGGGCAAGCTAACTCATGG
CGTTATTCCTATAAATCAACCATCTTTCCATCGATAGCGACCAGAGATGG
TTGTCATGGTAATCACCATAGAACGAATCCAATCCTGGCTTCAACTTGCT
GAATCAGCAGCATGCTAGTAATTCTGGAGAAAAAGTCAATACATTTTCAA
AACATGATAATCGACACTCGTTACAAGACAAAGGTGAATATTTTGGTCAG
CCTCCACGGAAAAATCTCCTTGAGCGGAGCCGCCGAAAGAAGGTTCCCAT
AATTCATGAATCGCCGCCTTCAGAACTTCCCTTATTCATAAGGAAAAAGT
ATCCACATGGAGAAAGATACAGGAAGGATTGTGCCGATCTACCAACAAAT
TGGGCTAGGAAAAAGATATTTTAAAGAAATCAACCATCACCATAGAAAGA
CACAATTTAAAATATCAACACCTGAATCTCAACAAAATCGTTTAGAAGAA
CAAAAAGATAAACATTCTGATTCAAAAACACCACAAGTCATCACACACCA
TCGTAGATTTCCAAGACAATATAACAAACCATCACCAAATAGTACAATTC
CTACTGACACAACAAGTTGGTGGCCATCAACAGACAGTTATCGTACACCA
ACTCAAGTTTTAACTATAACTCAAACCATTCCAGGGCAAGCTAACTCATG
GCGTTATTCCTATAAATCAACCATCTTTCCATCGATAGCGACCAGAGATG
GTTGTCATGGTAATCACCATAGAACGAATCCAATCCTGGCTTCAACTTGC
TGAATCAGCAGCATGCTAGTAATTCTGGAGAAAAAGTCAATACATTTTCA
AAACATGATAATCGACACTCGTTACAAGACAAAGGTGAATATTTTGGTCA
GCCTCCACGGAAAAATCTCCTTGAGCGGAGCCGCCGAAAGAAGGTTCCCA
TAATTCATGAATCGCCGCCTTCAGAACTTCCCTTATTCATAAGGAAAAAG
TATCCACATGGAGAAAGATACAGGAAGGATTGTGCCGATCTACCAACAAA
TTGGGCTAGGAAAAAGATATTTTAAAGAAATCAACCATCACCATAGAAAG
ACACAATTTAAAATATCAACACCTGAATCTCAACAAAATCGTTTAGAAGA
ACAAAAAGATAAACATTCTGATTCAAAAACACCACAAGTCATCACACACC
ATCGTAGATTTCCAAGACAATATAACAAACCATCACCAAATAGTACAATT
CCTACTGACACAACAAGTTGGTGGCCATCAACAGACAGTTATCGTACACC
AACTCAAGTTTTAACTATAACTCAAACCATTCCAGGGCAAGCTAACTCAT
GGCGTTATTCCTATAAATCAACCATCTTTCCATCGATAGCGACCAGAGAT
GGTTGTCATGGTAATCACCATAGAACGAATCCAATCCTGGCTTCAACTTG
CTGAATCAGCAGCATGCTAGTAATTCTGGAGAAAAAGTCAATACATTTTC
AAAACATGATAATCGACACTCGTTACAAGACAAAGGTGAATATTTTGGTC
AGCCTCCACGGAAAAATCTCCTTGAGCGGAGCCGCCGAAAGAAGGTTCCC
ATAATTCATGAATCGCCGCCTTCAGAACTTCCCTTATTCATAAGGAAAAA
GTATCCACATGGAGAAAGATACAGGAAGGATTGTGCCGATCTACCAACAA
ATTGGGCTAGGAAAAAGATATTTTAAAGAAATCAACCATCACCATAGAAA
GACACAATTTAAAATATCAACACCTGAATCTCAACAAAATCGTTTAGAAG
AACAAAAAGATAAACATTCTGATTCAAAAACACCACAAGTCATCACACAC
CATCGTAGATTTCCAAGACAATATAACAAACCATCACCAAATAGTACAAT
TCCTACTGACACAACAAGTTGGTGGCCATCAACAGACAGTTATCGTACAC
CAACTCAAGTTTTAACTATAACTCAAACCATTCCAGGGCAAGCTAACTCA
TGGCGTTATTCCTATAAATCAACCATCTTTCCATCGATAGCGACCAGAGA
TGGTTGTCATGGTAATCACCATAGAACGAATCCAATCCTGGCTTCAACTT
GCTGAATCAGCAGCATGCTAGTAATTCTGGAGAAAAAGTCAATACATTTT
CAAAACATGATAATCGACACTCGTTACAAGACAAAGGTGAATATTTTGGT
CAGCCTCCACGGAAAAATCTCCTTGAGCGGAGCCGCCGAAAGAAGGTTCC
CATAATTCATGAATCGCCGCCTTCAGAACTTCCCTTATTCATAAGGAAAA
AGTATCCACATGGAGAAAGATACAGGAAGGATTGTGCCGATCTACCAACA
AATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039204XLOC_039204Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062574-exon-scaffold_369-1575043694:258585..258931TCONS_00062574-exon-scaffold_369-1575043694:258585..258931Clytia hemisphaericaexon
TCONS_00062574-exon-scaffold_369-1575043694:256875..257530TCONS_00062574-exon-scaffold_369-1575043694:256875..257530Clytia hemisphaericaexon
TCONS_00062574-exon-scaffold_369-1575043694:256051..256156TCONS_00062574-exon-scaffold_369-1575043694:256051..256156Clytia hemisphaericaexon
TCONS_00062574-exon-scaffold_369-1575043694:255891..255988TCONS_00062574-exon-scaffold_369-1575043694:255891..255988Clytia hemisphaericaexon
TCONS_00062574-exon-scaffold_369-1575043694:252863..254829TCONS_00062574-exon-scaffold_369-1575043694:252863..254829Clytia hemisphaericaexon
TCONS_00062574-exon-scaffold_369-1575043694:252585..252778TCONS_00062574-exon-scaffold_369-1575043694:252585..252778Clytia hemisphaericaexon
TCONS_00062574-exon-scaffold_369-1510915933:258585..258931TCONS_00062574-exon-scaffold_369-1510915933:258585..258931Clytia hemisphaericaexon
TCONS_00062574-exon-scaffold_369-1510915933:256875..257530TCONS_00062574-exon-scaffold_369-1510915933:256875..257530Clytia hemisphaericaexon
TCONS_00062574-exon-scaffold_369-1510915933:256051..256156TCONS_00062574-exon-scaffold_369-1510915933:256051..256156Clytia hemisphaericaexon
TCONS_00062574-exon-scaffold_369-1510915933:255891..255988TCONS_00062574-exon-scaffold_369-1510915933:255891..255988Clytia hemisphaericaexon
TCONS_00062574-exon-scaffold_369-1510915933:252863..254829TCONS_00062574-exon-scaffold_369-1510915933:252863..254829Clytia hemisphaericaexon
TCONS_00062574-exon-scaffold_369-1510915933:252585..252778TCONS_00062574-exon-scaffold_369-1510915933:252585..252778Clytia hemisphaericaexon
TCONS_00062574-exon-scaffold_369-1491911889:258585..258931TCONS_00062574-exon-scaffold_369-1491911889:258585..258931Clytia hemisphaericaexon
TCONS_00062574-exon-scaffold_369-1491911889:256875..257530TCONS_00062574-exon-scaffold_369-1491911889:256875..257530Clytia hemisphaericaexon
TCONS_00062574-exon-scaffold_369-1491911889:256051..256156TCONS_00062574-exon-scaffold_369-1491911889:256051..256156Clytia hemisphaericaexon
TCONS_00062574-exon-scaffold_369-1491911889:255891..255988TCONS_00062574-exon-scaffold_369-1491911889:255891..255988Clytia hemisphaericaexon
TCONS_00062574-exon-scaffold_369-1491911889:252863..254829TCONS_00062574-exon-scaffold_369-1491911889:252863..254829Clytia hemisphaericaexon
TCONS_00062574-exon-scaffold_369-1491911889:252585..252778TCONS_00062574-exon-scaffold_369-1491911889:252585..252778Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062574-proteinTCONS_00062574-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_369supercontigscaffold_369:252585..258931 -
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.75478 5.35952 3.57243 3.09081 9.58409 7.26365 9.11117 10.4411 9.7556 10.2608 8.9834 7.71121 7.92204 9.77926 8.67505 10.1532 9.91653 12.5872 9.17248 9.4019 11.9376 12.84 12.4437 11.9512 5.74505 7.14675 8.08881 7.23227 7.74234 8.61704
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029369HDNR
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00062574 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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