TCONS_00062709 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062709
Unique NameTCONS_00062709
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length864

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062709 ID=TCONS_00062709|Name=TCONS_00062709|organism=Clytia hemisphaerica|type=transcript|length=864bp
CGAGCTGCGGTAACAGCAAAACGGACCAAagcATTATTATAATGTACAGT
AAAAATTCTTAACTTGATTGTATAATATATCCAATCTGCAATCATGAGTC
TGCTTGTAACAGCTGGTGAAGATGTCCGTCTATGGAATGTTCCAGACCTC
AGTTTACAAAAAGTACGGAATGGAACTAATGCCAATGTACTTCACTGTAT
ATGCAGTCCCAATGGTCAGTATGTGGCTTACACATATGAGGAGGTTGGGA
TTCGTATCAGCAGTATGTCTGATGATGACCTACCTGTTATTGAGATTCCC
ACACCGATTCAACAATCAAGTGTAGCATTCAACGGGCATTCCAGATACTT
GGTCAGTGGTGGCTTGGATTGTGTCATCAATATTTGGGACATCAAATCAA
GAACTGTCAAAAGAACCTACAAGAACCATTTCAATCCAGTAACGTATTGT
CAATTCAACTACAACGACAACATCATTGCATCGTCATCTGATCACGGTGA
CATCATTTTGACCAACGTCTCCAGTGGTGAATGCTCAGATCCGCTCACTG
GCAATGATGATTCGCAGGCTGTTCGCTGTCTTGGTTATTCCCACTTTTCA
AGATCACTCTTGGCTTCAGTCAGTGACAGTGGTGCTGTCTGTTTATGGGA
CACTAAAGAACAGAAAATGTTGAAGAAATTCACAGACCATAAAGCTCCTG
GCACATGCTTGTCATTCTCACCGCTCAATGATATGTTATTGTGTTCATCT
GGACTTGACAAGCGAATCATATTCTATGATGTGATTGGAAAAAAGACAGT
AAAGACGATCAATACAGAAGGGCCGATCACTTCTTGTGACTTTTTCAGTG
ATGGGTGCACTGNG
Run BLAST on NCBI

protein sequence of TCONS_00062709-protein

>TCONS_00062709-protein ID=TCONS_00062709-protein|Name=TCONS_00062709-protein|organism=Clytia hemisphaerica|type=polypeptide|length=257bp
MSLLVTAGEDVRLWNVPDLSLQKVRNGTNANVLHCICSPNGQYVAYTYEE
VGIRISSMSDDDLPVIEIPTPIQQSSVAFNGHSRYLVSGGLDCVINIWDI
KSRTVKRTYKNHFNPVTYCQFNYNDNIIASSSDHGDIILTNVSSGECSDP
LTGNDDSQAVRCLGYSHFSRSLLASVSDSGAVCLWDTKEQKMLKKFTDHK
APGTCLSFSPLNDMLLCSSGLDKRIIFYDVIGKKTVKTINTEGPITSCDF
FSDGCTX
Run BLAST on NCBI

transcript from alignment at scaffold_371:163..24432-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062709 ID=TCONS_00062709|Name=TCONS_00062709|organism=Clytia hemisphaerica|type=transcript|length=24270bp|location=Sequence derived from alignment at scaffold_371:163..24432- (Clytia hemisphaerica)
CGAGCTGCGGTAACAGCAAAACGGACCAAAGGTAAATTTCTTTTCAAAGG
GTTTTTATTTTTTTGGGATTGATATATCTCTATGAAGGGAACCAAATCGA
CGGTCATCGAAAAGTTGATAGCTGTTTGATTTAGTTTAGTAGTGGCTGGG
ACATAGCTACGTGAGCTTCTTTTTTTCACAATTCTGCCGAAAGACACACA
TTGCATCATCATAGACCACAAGTGTTACGCGTAAGCCAAATCGCGTATTA
CGAACAACCTCTAAATTGCCGAGTACAGGAGAAAAAAAATCGAAATTCAA
AATGGCTGCCAAGCCCACGATGATAACTATCAAAAATCTTCGTTTTTCAT
TCAGCTATTGCAGCTCAATAAATAGGACCCTGCCGACGCACCGGACTTAA
CCACTGCTGTTCCCCTTAGGCAAAATCGTCGATTCTGTAGAGGTCACGAA
ATTGCCGAGTACAGACGTAAAAAAACAAAAAATTAGGAGTTTTCAATTGC
CCACTACAACAGAATAAGACTGAGAAATGCAGTAAAATAAAAAGTAAACA
AACCTTAAACCTTTTGTTTGTCAAAATAAGGAAAATATTCTAGCTGCAGT
AATGTTTCCATTCAGAAATAAATCCATTTTCCACCAGACCTACAACAAGG
TTTCAAACCACGCTGTGGCATTACTGGCAATGAATTCTGACTTAAAAAAT
GTTGGTCCAGTTCCCTAGAAAGGGTATGATTACACTTCCAAATGACTTTT
TTTTACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNGGTGTAAAATGAGAATTTTTTTTACCACCGGACAA
TTTCTACACCGGACTTAAGGAAGTCGGATGTCCGGTGTCGGAGAAAGATA
TTTTTTCCCACCGGACAAACAAAACACCGGACATGACCAGTCCGGTGCGT
CCGGTGTTTCTTATTTTTTGTTTCATAAATGTACGGCGTCCAAAATTCCC
TGTATGCAACACCGGATAGTGAAAGGATACTTTTTGCCACCGGACAAATA
CACCGGACAGTCCGGTGCGTCGGCAGGGTCCTCAATAAATCAATGAAATA
ATTTGAAATAAAAAGTAAACAAACCTTGAACCTTTCATGAATCCAAATAA
ATAAAAGTATTCATCTAAAGTGAAGATTACATTTCAANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAAATAA
AACGATTTCCAAACCAACCTAAAGTCAGTGTCTGCCAACTAAAAACTTCT
CTGCGGGGTCACTGACAAGGAGTTACGACTTCAGACTTTAGACTCCAATT
CTTGTATAGGCTGCAACTATACACTGCCAAATGATCTGTATTACAAAGAC
TTCCAATTGGGTCCATAAGTTAAGAAAATGAGATTTTGTTATAGCACGGG
GGTTCTGTTTTTAAAAACAAACTTCAAAATAAAATTGTTAATGAGCTTGT
TACTTAACATATATCACTTACTTACATAATCCATTTATGATATAACACCC
CTTTCTTAAATAAATGGCCTCTTAAAGTCTTCTATGTTTGCCGCAAGTAG
GAAGAAAAATTTAATTTGACCCCCGGTTTTTTCTAGCCATTTCCCGCGTG
TTAGTGTAGACACAACTTTAATCCGGGGAAATGAAGCGTTTTCATTGGTC
TAAAATCACGGATGGTCACGTGACCAGAATTGTTATCCAGGGAAATGCCG
TGGCCGCAATGTTTTGCTTTAGTGAGATTGACCATTTTGTTGTTTAGATT
TGAGCGGGCGAAATTTCTGTACAAACCAAAATATGGCTTCGTTGGAATAC
CGGTTGAAACACTTGTGAGACCTCTTTCCTTTTTTCAAAGAGGACTTCCT
GTTGAATAATTATGTAGTCCAGCCATAAAAACAATGATAGAGCCATGCAT
AATTACTGTATCATGCATATTGTAATAATTATGCATGGTCAGTCAGGCAC
ATCCTGGCAAATGAACGGGGTCAGGGGTGAGCATTTGCATGGGGTATTCG
TCACCCAGTGTAAATGAGATATGACGTCTCAGGCTAAAAGCGTGAAAATG
AATAAAAATGAAATTCAAACTGAAAAAGGGAAAAAAGGAAGAAAACTGGG
AACTTTATTTTTTCATTAAAAGTTTCTTCAATCTTCGAAGACAAAATTGA
CCCATGGAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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TTTGTTTTCGACCCCTTGCATTTGCCACCAATCACAAGTGAAAAATACCC
CGTTCATTTGCCAGGATGTGCCTGACTGATGGTTTTATCATGTTTTTCTG
CTGGACTACATAATTATTCAACAGGGTGGCCTCTTTGAAAAAAGAAAAGG
TCTATTGGACTTAATATTGCGTACCGTGAGTGGTCCTAAATCCGACAGCC
CTGCCTAATTCCGACCCCCCAAATAACGGTTATGAAAAGAACAACCCTGC
CTATGCCCCGGACAGTCCGGGGTTTTTTTGATGCGTGCCCGGGGTCCGTA
TTATTTGTTTTTGAGAGACTACCCCGGACGCCCCAGACAGTCCGCGCGGT
CGCTTTTTATAGAATCGCTGACCGCGCTGTCGCTTTTTATAGAATCGCTG
ACCGCGCGGGCTTTTTTTCTAATTCATCGATATACATCCGGGGTAAATTT
ATGGCGCAAAAATTGGAGCCCCGGACGTAGGTCCGGGGAAAAAGTTATTT
TTTTCAGACCCCAGACATTTGCCCCGGACTGTCCGGGGCATAGGCAGGGT
CGTTGAAAAGAAATTCTATGTTTACAAACACTCTCTCTCCAAGTTGAACG
ATAAACTATTGCAAAAATTCTCAAAACAAATTCAAAACATCTAACAGATG
GCTATATAATTGATAATGTCAAAACGTCAATAATGTAATTAAAAAGTGTG
AGTTGTAAAAGTAATTACTTTTTATTGTTGGACATATTGCAATAAAAAAT
TATGTTTCGTATAAGAAGCAATTAATGTTAATTATTTGGTTCAACTTTTA
TTGTATCAATTTTCTCAGTTTAGTTGACACTTTGGTATTTTTGTTGCGTC
ACAGCAAAAGGTTTTTTTATTTTAGTTTGTATCTTTGAAAGACCACGTCG
GATTTAGGCAGGGCTGTCTGTCGAGTGAGTAAACGTAATTATCGATGAAA
CCCAAATTCTCAAGGGAAAGTAATTACGAACTTGTTGCTCTCCATGGGAG
AGCCTCGATAAAAATTTAATGACTTTCATTTGGAGATCAAGTTAATGGCC
ATACGATGGAGAAAGCTATTAATTTTTTTGTAGGCGTTAGATTCTTTTTA
TACTTTAGCACGGAATCTTTTTTGCAACTTTTGAGATAAGGTTGTTGAGA
GTTGACGATGTCAACATTTTTTGTCTTTGATTTTATGTTTGATGAACAAT
ATTGATAACTTTTCACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTGAAGCTGAG
TTTATTTAGATTCATTGGTGATCAACTCGTTCAATTTCGTGATGTACAAC
ACTCGTTCAATTTCGTGATGTGCAACACTCGTTCAATCTCGTGATGTGCA
ACACTCGTTCAATTTCGTGATGTACAACACTCGTTCAATTTCGTGATGTA
CAACACTCGTACAATTTCGTGATGTACAACACTCGTTCAATTTCGTGATG
TACAACACTCGTTCAATTTCGTGATGTACAACACTTGTTCAATTTCGTGA
TGTGCAACACTCGTTCAATTTCGTGATGTGCAACACTCGTTCAATTTCGT
GATGTGCATTACTCGTTCAATTTCGTGATGTGCAACACTCGTTCAATTTC
GTGATGTGCAACACTCGTTCAATTTCGTGATGTGCAACACTCGTTCAATT
TCGTGACGATCAACATTCATTTCAATTTGGTGATGTTCGGCAACTGGGTT
CTGACGATGTCAGAGTTACTTATGTATTGAGAAAATTGTTGTTGTTTTGA
CACACCCTTTCGAACTTTGATTGTTTCATGGTGGGGAGTGTCGAGTGAGT
AAACGTAATTATCGATGAAACCCAAATTCTCAAGGGAAAGTAATTACGAA
CTTGTTGCTCTCCATGGGAGAGCCTCGATAAAAATTTAATGACNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNAACTTTTGAGATAAGGTTGTTGAGAGTTGACGATG
TCAACATTTTTTGTCTTTGATTTTATGTTTGATGAACAATATTGATAACT
TTTCACTGTCACCTTGGAATTGTGGTGTAGTGTTCTTGAGACGTTTTATA
CACAGCATTTATGCAGTCGCACGCTGGTAAGATAATATTTCATTTTATTA
AGTTTGATATTTTGCCCTATTTTCTAGACTTAGAGTATTTGGCTTGTCAA
ACAATATTTTCTATTTTCACTGAGATTTGTGAATATTTATTTTATCAGAT
TGAGGACAATTCTTGATTTGATTTTGTACAAATTTTGATAAGATTTGTGA
CCAAAGAATTTTCTTTTGTTCTTAGTTTGAACGCACTGTTACAAACACGT
CACGTACTGACTCGTCTCAATTCGCTGTTCCCACAACATTAACGTCGGAT
TTAGGACCACTCACGGTATTTTTCAGTTTCTAGTTCGTAGTTTTTTTTTA
CTTTTTGGGATTTTGCGAGTTATTTTCTACCGTGAGATCGGATAACTTGC
ATCAGTACCGTCCATACAGTTAACTGCTCCAACTTGGGACGGTTGGTCGA
AACATGGCCATGTGACCTTATGATATCTGGCCTGTATTTTCACTTACTGT
TAGGCAGCCATCAAAAAAATGCTCTGTTCGCGTCGCAACAGGTGTTAAAA
ATGCATGCGGGCGGACGGGCGGTCTGAAAAATTCCCAGGTTTTTGAAAAT
CGCGCCAGTAATTTGGAGACGGGTGGTGACTTGAACAAAACAATTTTTTG
ATGGCTGTCAGCGATTGAGAAAAAAGCTATACTTTAAAAGAATAAGTATG
CTTTTCCCAGATTTTTTTTCCGCGTCTCCGCACCAGAAAAACAGTGGAAA
ATATGATGCGGACGGGTGACGCGAATGGAACAATTTTTCGATGGCCGCCT
TAAATCTCTTTGACAACAAATTTAAAATTTGTTTTGATAAGTTTTTTGGA
CAAATTTCTTTCATTTTCCTAGGGATTTTTCAAATTTTTCGATAAAGTTG
GAAAAAAATTGTATTTTACGGGAATTATTTTTCGCGGTTTTCAACTATCC
AAATTTTTCGCGGGATCAAATTTTCGCGATTTTGACGAAAAACCGTGAAA
AACGCTAAAATTAAAACCCGCGAAAATTAGTTCCAATAAGGTATGTTCTT
TCTGTGAAAAAATCATAACATAACCATCAGTCAAATATTGTTCATCTACT
TAAGATTGAAGACAAAATTTACGAAGAAAAGTGTAACCTTGAGCACCAAA
ATTGCTTTTCTAAACACTTTTTTCCACTGAAAAACAAATAACTTTTATAG
ACTTACCTTCAAACATTGAAGAAGCCTCTACTGCTTAAAGTAAATGAGAT
AAGATAAGATAAAACTTTAAAATCAATTGGAATTTACAACCTTTTGTCCA
AAGCAAAAGTCGTGCTTTTCTCGCCGCCATCTTGTTTTAGAATAAGAATT
ATTTTCGGTTCCAGTTCCCACGGTCTTTTTTTCATCCAATCAGATCGCAC
GATTTGACTTTCGCTTTCTCTAGTCCCATAAGACTGCAGGATTTGAGTCA
TGTGACATCTCTATTGAAAAACTCGCGCAGAATAAAATAGAAATACAGGG
GGTCACACTATTGGCTACAGGAACTGAAAGCAAACAATGAAGGCCAATAT
TTTTGGTTTTTCTGAAGGAAAAAAGGTACAGGAAGCTTTACTGAAGGAGG
GATAAGGCTGGGACTATTTATTTAAAAGATATGGACAAAAAAAGGCACTT
TTTTGGGTGATAATTAAGATTTTACTTAGAAACTTTAATTCTCTTACCCC
CATCTCAGGCCCCCCTGATATGAGCAAAGGAACCATGTTGGCCGTACCCC
TATTGAAAATTTCAGATCAAAACAAACAAGGAATTTAAATTCCTGTAACT
CGATGAAAATTGGAAAAAGCTGGTTTATGATCCTAAAATGCTATTTTTTG
GTTAAAGCTATGCAATTTATGTTTGGATTTCTAGAAAGCTTACCCATTCA
TTGTCAATATATTTTTTATTTGAAAGTAATCTCTTCATGGAATAAAAAGA
TATAGTCTAATCTTGTAGGGTCATTTTTCAAAATATTTTGCCAAAATCGA
TTTTCGCATTTCATTGGGCACATTTTGAAATAGCCTTAACTCTTCATATA
AAATTTACAGTTGACGCATATTCATAGCTGCCAACTTGAAATGTTCATTT
TGCGTGAGATAAAAATTTCGAAGTAAAATCTGAAAACTTAGACCCGTTTT
TTTTCCAAAAAGCGGGAAATCGGGAAAACTTTTTTCCAAAAATTGGAAAA
ACAGGAAAATTGTTCCTAAAAATCCAAAATGCGTGAGAAATCAAACTTTT
CAAAAATTGCGTGAGACCATGTGGAAATGTGCGAGTCTCACACCCAATGC
ATGAGAGTTGGCACCTCTGCATATTTGAACTTTGTGCTCAATGTTGTACA
CAAACACTTAAAAGCTGAAGACTTGCAATTGCAAGACAAAAATCAGTTTT
TTGAAGTTTGCATAAAAAACTCCACATACTCAGGACACTGTCAACAAGAA
GGTACAAATCATGCACCATGCCAAAAATGGCTAAAAATAAGGTTTTTGTA
ATAACTTGCCGAAATTATATAAAAAATTACAGTAGGGAAAATCTCAGAAA
CCTCTATATTAACATTAGAAAGGGTATAATATGGTTAAAATCACTCCATG
AAGTTAAATGGCCCAAATATGGCTAATTTGTTGTCCAGACAAAAAAATTG
TCCTTAAAAGGGCCATTTAAGCTTAGTCTATACCAAACCTAGTTTAAACT
AAAGCTGAATGGTTGTTTTAACTCCTAATAGTAAAATGGCCCACTTTTTA
CATTCTTGGGTCCCAAAATAAGACAATAAAGTTGTCCTTAATTTTAACTG
TGATATTTTACAAAAAAGACAATTTATTGTCCTTTTTGGGACCGAATAAC
CAAAATCTGCTACCTGAAAATTAATTGTGAACCATTCATACACTTTTGTG
CAAAATTTTAGCTTAAATAAGCTGATAGTTTTGGCACTATCCTGGAAAAG
ATAAAATGGTTGAATCAGGTTGAATCCTTAGCGTTAAAGCACAAAAAGAG
GTTAATAAAAATACATTTACCTTTAGGACAACATATTGTCCACGAGAGGG
GCCGCTCAACGATTCTAATTTTAATTATCTTATATTTGAGGTATTTCTAG
CCTGATCTGTAAGGATCTTGAATGAATTTTTGTTTTAAAGTTGATTTTCA
TGACAATTAATTGCCCATACTTTACAACATTTAGGACAATTTACTGTCCA
TTTTTGGACCTTTTTACGAGATTTTATAATTGGAATCTTGTTGTAGGATA
AGGCTCTTCATGTGTACCAAATTTTGACTTGATTGGAGCACCCTATCAAG
ACTTATTGATCTTGGATAACTCATTATCCTTTTAGTTAGGACAATTCATT
GTCCAACATGGGTCTGAAGACAGATCTTTTAACTTAACCACAGGTATCAA
TGTAGGGCCTAGTAGACATTTATGAGTCTGTAATTTTCAAAACCAGTCAG
GGTTGTAAAGATGGTGCAAAAACAGCCATTTTTTGTACTTTGTTATTGAC
AGTGTCCACCAGTGGATACCTCTTAAAACCTACAAAGTTGGGTTTTGGGC
TCTCTTAACCACCAAAGTTAATTTAATACTGTATAATTCACTGTTTTACA
ATCTCCAATACAGGCACTTTCAAAAAATATCTAATTTCAAGAATTTTAAT
TATCTCAAAGTGTTGTAAAATTCGAAGTTATTGAAAATATTACCAAAATT
TATACCTTGAAAAAAAACCAAATTTTCGGACCTAGAGATTACACAAATGA
ATTTAAGGTCATAAAACCTATACTTTTTAGGTACCTAAACTTATGAAAAA
ATCACTGTCTTCTCCGTGGTTACACCTCAAAGAAATCATAAGACCCTCAA
AGTTCTATTTTAAAGCTCATTTTATGGTAGTGGCCAAGAAAACCATTTTG
TAGGTTTTAAAGGGTAAATATAGCTAAAATTGAATTTTTTCACAAAGCAA
TAAAAATTTTCTTAGCAGCTTTTACAAAAAAACATACCCAGGGAAGAAAT
TCATAGGTAGCCTAGACTCACAAGAAAAAGTTTCAGTCCTTGCTGTTCTC
TCTGTCAGGATATAGGGAGTACCTTTTTGTTGTTGTAGGTTTTAAGGGGT
ATCCACTGGAGAAGATCTTTTTAATTCAGTACGTGAATAGAGCAGTGAAA
AAAAAAACTTATTTTTTTCCTTTTTATTTTTTTTTAATTATTAATTAAAG
AGAAATACGGTTTCAGGCACTCATTGGGCCTCTTAAACCGATCTTTTACA
AAATATTTTCTTAAAATGAAGTTTGTCGCGAGGACTTCCTCGGACTCTGA
ATACATGATCTTTCTCCGACATCGCTTGATTTATTTTGTTCGCTTTTTTG
CGCCACTCTTTAACTTGTTCTCTTTCCATTTTGGTTAGGTCGTCCGTTAT
GCTAACGTTGTTGTACTTTTGATGTTGTTTTAGTTCCTTCCACTGTTTCA
TAAATCTGTATTTGAAATGTGTGTCTTTAAACACGACTTTTATTGGGCGC
ACACCAGATTCTTTTCCTATACGGGAAACGTACGTTGGTTCTGTATTTAT
ATTGACGTCGCTTAGGAGGTTGGCTACGAAGTCTTTCTCATCTTTGTTTT
CGGCCTCTTTGACACCATGTATGATGATGTTGGCATGCCTTGATTGTTTC
CTCTGTTCCTCGATTTGTTCTTCAACTTTTTCACTCCGGAGAAGCCGTTT
TATGTTCGTGATGTTTAAGTCGTTGTTATTTTTTGTCATCTCAGCGTAAC
TTTCCGTAGGAATTTCCTCTTGGTCCTTTTTAGTCTTTGCAATTATTGTC
TCTTCGATTTTATTGACGAGTTTAGTTTCCAAGTCGGAAAATTTTGTTTT
GATTATTTCAGTTACATGGTTCTTCTCCTGTAGATATCCTTGGCATCTTG
CTTGCAGCTCATTAACTACACAGCCTAGTCTTTTCTCATTTTCGCTACTA
TTTTTCTGGCTGTCAACGGAGCCTTTGACACGCAGTGATTGATCGATTAT
CTTTTTATTCAGTTCTTCATCAATTGAACAGCAATTTATACACTGGTACT
TTTGAAAGCCTTTATTCAGAAACAGCTTTAATTGATATGTTGGGAGTCCA
GTACATGCATAATGTATTGCAATTTTGACATTCGATTCTCATATTATCAT
TATCTTTGATACAGTTCTTTTCTGTGCATCGATCCGTGCCATTTTCACTT
TCTTTTTTGGTTGATGTAGCAATAGGAGAAGCTGTTTGTTTTTGAAATTT
GGTTGTTTTTCTCATGTTTTTTTATTTTTGTTAAAAATTCTCCATTTTTT
AAAGAAACGAAGTAAAGTAAAGAGAACGACCTTCCTAATTGACATCAAAT
AAATTAAATGAGCAAAAGTCTAGAAATGAAAATAAAGGGATGACAATAAT
TGAATTCTATCCACTGATGATCAACGGCACAATCCTAAAGCTAGAATTGC
TTAGCGTATCTCCACTTGAGAAAATGATTGACGGTTTTGCACCCATGCAG
GAGCTCACAGACGTTAAGGTTGTGGGTGACTTTTTTAAAGCCGGCTCAAT
CCTCAAACTGCGCAAAATGATAAAACTTAGCTGCAGCAGATCATTTCGAT
GGCAGTTATACAAGACTCTTGACAGAAAATTCTTATAACTCATTTAAAAA
ACTGTGTAGCTCATTTTACTACATTTCGATAGCTAAAGATTATGCGTTTC
AAAAACAAACGTCAGATTTAATGTTCTTGGATTTGAAATGTCAGATTTAA
TGACCTATTGTTTAATTCAGCCTTTTTAGACCAGTAGTCTGGCTGATTTA
TGGAATAAAAGGGGTCAACCTTGAAAAAATTTCTGCACTAGGCTTCTTGG
TACCGTTAGAAGTGCAATTTTATGTAGATTGATATACTCAGAGCCTCACG
ATGAGGCCCTTGGGCAAAAATTATGTATGCTTGGTGGTTTCCATTTGCTA
ATGAGCTTTATGGGTAGTATCGGATCGTTAATGAAAGCAAGTGACTTCGA
TGGAGCACATTTATGCAAAGAACACTGTTCCACACATCGTGAGCACTGAG
GGCACATTTTCTTGTTGAATCTGCTCTTGTTTGCAAATTGGTGTCACCAC
TTGTTGGTTCTGATGATGAGGCTGTAGAAATCGAAGATCTGACAACCGAT
CTGAACGTGATTGCCAATGCTGTTGATCCCACCATTGATTTGGACATGAG
CAGATATCCAACACTGTCGAAACTTCTGGAACTTCTAGAAGATTACAAAG
ATGATCTGAAAACATGCTCACGTACCGCGAAATTATGGTTGCAATATCTA
GATTACAAGGAAGTTGTCAAGGATTTCATTAGATCAGAAAAGACAGGAGA
TTGGAAGCTTTACCTTTTCTCGGATGATCGACCTGCTTGCAGCAACCACT
CACATCCACTACGCTAAGAACGCCAGGCTACACCTCCAAAATATACTCGA
GCTCAAGACAACTCACCCTTGGGTTTACAAGCAGTTTTCAAATGGTTACC
ACACTGTGAGACAAAGCGATAAATTTTGGGCTGGTTTATGGTCGGATTTG
ATCATCAAGCAGGTAATGATGCGATTCATCAAAAGCAACGGAGGCCTCAC
TCATAGTAGGGGAATCTCCGCATCAACACGTCAACTTTGGATTGGAAGCA
TTCACTGATCTGCCGACATCCACAACGCTATGTCAAAACGAGCGAGCAAC
ATGTCAATCTTTCGTTGAGCAGAATGAAGCGTGACGATAAAGATTTCGCT
ACCGTAAAAGATTGGTTTGACAACCACGAACCGTTCGAAAAAACAGAGCC
TGAATTGAAGAGTCTCTCGAGTGAACTGATCGCTGAGCCAGAGATTAACT
GTGATGTGGCCGAAGACGTTGGAAGAGGGATTCAAAAGAAGCAAGACGAC
ATTGTGTTCGAGGAGGCCAGGATTCGACAGAAGGAGAAAGCAAAAACCTT
CGAAGACATGCTTTCAGCGAGCAATCAAGATTGGAGACAGCAAAAAGTCC
AACAATATTGTTTAGTTGACTAACTGCTCTTGGCAACTTCACTGAGGATG
TTGGTGAAAATTTCTGTCATGACCTAACCCCCGAACCTATATCATTATTC
AAGCTGATACAACTTCTGTCCTACATCAAAAAGGTATAAAGTTCTTTTCA
ATAAAATTACATTCCGATTATTTTAGAATGAATGTTTTGCATTTAGCAGC
TGATGATGGTGATTCTATAACATAGCTTTTGCCAGGAAATGTACCTACAC
ACAGTTAAGCACTTCTAAAAAACAACAGGTTTTTGTTTCTTTAGGGAAAA
CAAAGATTTTGACAACTTTGAAGTCGGAACCCGTCCGTGAATTAACTCAA
ACTTATGTTTGTGCAGTCGCAATGGGCTTTATTGTGTTGCTGCATTTGGT
GGGTGTCATGGTGAAGGGTGTGAAAACTCAGAAGCCTCACCACCAGATTC
AGATACTGTTATGAAACTGAGGAGCCCTTGATGAGTGAGAGGAATATCTT
TGACATTCTGGAAACACTTATTTAGATTTTCTAATAGATTTTATGAGAAA
TCTCATGAATTTCTAAAGTATAATTTGACATATTCTTACATTTCTCAATT
TCCTGATTCTGTGTGCCCGATTTCCCAATTATGTGAGCCCGTTTTCCCCG
AAAACCTATTTCATAACTTTTTAGCGTTACTTTACTTAACAGAAGTTCAA
AAGTTGTGACCATTTTATATCTAACACTTTTTGAAATACTTTTGTGAAAT
TCTAAAAGAGAAATTAAGTTTTGTAACATTTTCCCGATTTTCCGATTTAA
AAAAACCGATTTTACAGAAGAGCTAGATCCTTACCATTATTTTGGCTTTC
AGAAGTTTAGAATTAGATTTGTCAACCTGTCATGTTATTAATAAGCGTTA
GTTTGTCATATTTTCAATATTTATTGAGGTTTTCTATGCATTTTCCCCCT
ATTTTCCAATTTTTATGGTCCGTTTTTCCCGAAAAACCCGATTTTTAATA
TTTTTAGGAAGCCCTTATTTCAATGCAATTCATAAATTCTAATTAAGATT
TAATCAAAGCAGTTTTTTAGGTCTTAAAAGTTCATGACGTATAGGTCAAC
TTTGTTACGAAAATTCGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNAGGTCTTAAAAGTTCATGACGTATAGGTCAACTTTGTTACGAAAATTC
GAATTCCGGGCATTTTGGGCAAAAAAGTACCCCTCAGGTTTGATTTCATA
AATTTTTTGCTCAAGGGCTTCATCATGAGGCTCTGAGTATGTTAATCTAC
ATAAAATTGCGCTTCTAACGTTACCAAGAAACCTAGTGCGGAAATTTTTT
CAAGGTCAAATCCTATTTCAGCCAGACTACAGAGGAAAACCAGTGTATTC
AAAGGGATTCTGGTATATTCAAAAGGAATCCAAGGCTCTCGGAGGGTATT
CAGAGGGAATCCATGGCAATCCGGAATGTGCTTTAAAAAAAAAGTTTCCC
CTAAAATCTAAATGTTCTTTATTTTTATGTTTTAGCATTATTATAATGTA
CAGTAAAAATTCTTAACTTGATTGTATAATATATCCAATCTGCAATCATG
AGTCTGCTTGTAACAGCTGGTGAAGATGTCCGTCTATGGAATGTTCCAGA
CCTCAGTTTACAAAAAGTACGGAATGGAACTAATGCCAATGTACTTCACT
GTATATGCAGTCCCAATGGTAAAAGTCATTGTTTTCATTATTGATTTCTA
TTGATCTATTGAAATTTTTCTTTTCTGATTAATTAAAAAACAGACATTTT
CTTGATTTTATTTTTTATCACCAGGGATATATTGATAAAAACTGACAAAC
TGAAATCTTCTATGTTTGTGTTTTTATGGTTTAAGTATCTTTTCTTAAAT
TTTTGCTCTAAAGTCATTCTTACGCAGTTTTCATTGCCATTTATCTGGCT
TTCGCTTGAATTTCTGTCTTTTTGTTGTAGGTCAGTATGTGGCTTACACA
TATGAGGAGGTTGGGATTCGTATCAGCAGTATGTCTGATGATGACCTACC
TGTTATTGAGATTCCCACACCGGTAAGTCTTCTAGGACATTTTTTGAAAA
TGAAAGGATTTTTTTTGAGAAACCTGTTTACAGTTTCAGAGATGATTCAA
TCAGGATGCTTTCTTTCGCCACTGTTGTAACTGAAAGTTTTTTACTGATC
TTTAACTTTTTGACTGGATTGGGTTCCTATGATAATTGAAGTGTGCCCAG
CTTTTGAGCTGATGTTTCCAGCTTTTGATCTTAATAGTACACCATGTTGT
TTTCATTTCTGGTTGTCGACCACATGATTTAAATGTTTTGAAACTGAAAT
GTTCGAAAATAAAACGTACATAGATAGAAATCAACATTACAGGGAACTTG
ACTTTATTACTAGGCACACTCTCACAGGAAATCTTGTGTTGAGGCAGTTT
TTGTTAAATTTTTTTATTTTAAAACATACCTGTTAATCCTAAGACTGGCT
GGTTGAGGGTTGATTCATATTCAATCTACTGGACAGCTTTAAAACAAGAA
CTAAATTCAATAATTTTAGATTCAACAATCAAGTGTAGCATTCAACGGGC
ATTCCAGATACTTGGTCAGTGGTGGCTTGGATTGTGTCATCAATATTTGG
GACATCAAATCAAGAACTGTCAAAAGAACCTACAAGGTTTTTACACACTT
TTTATGCTAAAAAGTCTTAAAGTGCTCTAATGATCAGACTTTAAATTGCA
ATTTGTTTCTCACAAATCATTGAATTCATCGAGGTTTAAAACTTTTAAAA
CTTATCTCCACTCCCTATTCTAATGGTCAAAATAACAGTTCTGTAGTATT
AAAAGATTAATTCAAATAATCTTTTGAGAGCTTTCTTGCGCTATGTTGAG
TTTGAGATGTAGATTTTTTGGGGGCTCTTAGAATTTTAATGCCTGATAAT
TTCTACAGGACTAAAAGTATACTAGGATTTTGAAATTATGATTACCTAAG
CCCATGCCAATCATGTTAGTATACTCTAAACGTTCAAGATTAAAAATAAA
AAGTAAGCAAATGATAGGAATTACATTAGAATATGTCCTTTAATTTAGGA
AACTGATGATATTGAAAAAAAGATAGAGGTTCTACTTATTTTTCCATCTC
CATAGAACCATTTCAATCCAGTAACGTATTGTCAATTCAACTACAACGAC
AACATCATTGCATCGTCATCTGATCACGGTGACATCATTTTGACCAACGT
CTCCAGTGGTGAATGCTCAGATCCGCTCACTGGCAATGATGATTCGCAGG
TAATGGTCTGGTACACAATTTATATATCCTTCTTTTTTGTTATTTTTCCA
CTATGCTCGACACAATAAAATGAGTATGAAGATATAGCCAGTAGTAAACC
TGCTTCAAACTTCAAAATCCTAATTTAGTAGTAGGATTTTTGCAATTTTC
GTCCTATTTCCTGACCTTTTGGAATTGTTTATCTTGAAATTGGTCCTTTT
TTCACAGGCTGTTCGCTGTCTTGGTTATTCCCACTTTTCAAGATCACTCT
TGGCTTCAGTCAGTGACAGTGGTGCTGTCTGTTTATGGGACACTAAAGAA
CAGAAAATGTTGAAGAAATTCACAGACCATAAAGCTCCTGGCACATGCTT
GTCATTCTCACCGCTCAATGATATGTTATTGTGTTCATCTGGACTTGACA
AGCGAATCATATTCTATGATGTGATTGGAAAAAAGTAAGAATCTCTTTTT
GTCGTAGTGAGTAGGCTTCTGTTTCGATAGCTATCTCTTGGAAAGCAATT
ACTGAGTAATTATAGGCATATTTATAATATTTTCCAATGCTTCGTGAAGA
CCTACTAGGGAATGAGCTTGCTATTGTCCTGACAAGTAATTCAAAGTTCG
TCATTCCTGGCAGTAAACAGAGGCTTGCTTTCTCACAGTGCACTCTGTGC
GCATTATCTGTTTGATAAATAAAAGAATTCCCGTACGTAAACCTCTGAGA
TGAAGTATGATTTACAAATAGCAACACTTCTCTCATTGTCTTACCTCTCC
CACACCCGCACTCCATCGCAGCGGTCGGTTTGAAAAATCTCAAATCAGAA
AAGACAAAGACAACAGACCCTCTACTGCATTGAATTTTGAAATCAGCCGT
AGATATCGGGTCTATGTACAGATTTACTTTCATTTCAAGCTGCTATTAAA
CTTGGCAATTTCTTGACCCCTGTTATTAATTTTTAAAAACTTCTCATCTC
AAATTTGTACAGATTTTAGCAATGGCTTTTTTCTTGTATTCATTTCACAG
GACAGTAAAGACGATCAATACAGAAGGGCCGATCACTTCTTGTGACTTTT
TCAGTGATGGGTGCACTGNG

Coding sequence (CDS) from alignment at scaffold_371:163..24432-

>TCONS_00062709 ID=TCONS_00062709|Name=TCONS_00062709|organism=Clytia hemisphaerica|type=CDS|length=4626bp|location=Sequence derived from alignment at scaffold_371:163..24432- (Clytia hemisphaerica)
GACAGTAAAGACGATCAATACAGAAGGGCCGATCACTTCTTGTGACTTTT
TCAGTGATGGGTGCACTGNGGCTGTTCGCTGTCTTGGTTATTCCCACTTT
TCAAGATCACTCTTGGCTTCAGTCAGTGACAGTGGTGCTGTCTGTTTATG
GGACACTAAAGAACAGAAAATGTTGAAGAAATTCACAGACCATAAAGCTC
CTGGCACATGCTTGTCATTCTCACCGCTCAATGATATGTTATTGTGTTCA
TCTGGACTTGACAAGCGAATCATATTCTATGATGTGATTGGAAAAAAAAC
CATTTCAATCCAGTAACGTATTGTCAATTCAACTACAACGACAACATCAT
TGCATCGTCATCTGATCACGGTGACATCATTTTGACCAACGTCTCCAGTG
GTGAATGCTCAGATCCGCTCACTGGCAATGATGATTCGCAGATTCAACAA
TCAAGTGTAGCATTCAACGGGCATTCCAGATACTTGGTCAGTGGTGGCTT
GGATTGTGTCATCAATATTTGGGACATCAAATCAAGAACTGTCAAAAGAA
CCTACAAGGTCAGTATGTGGCTTACACATATGAGGAGGTTGGGATTCGTA
TCAGCAGTATGTCTGATGATGACCTACCTGTTATTGAGATTCCCACACCG
ATGAGTCTGCTTGTAACAGCTGGTGAAGATGTCCGTCTATGGAATGTTCC
AGACCTCAGTTTACAAAAAGTACGGAATGGAACTAATGCCAATGTACTTC
ACTGTATATGCAGTCCCAATGGACAGTAAAGACGATCAATACAGAAGGGC
CGATCACTTCTTGTGACTTTTTCAGTGATGGGTGCACTGNGGCTGTTCGC
TGTCTTGGTTATTCCCACTTTTCAAGATCACTCTTGGCTTCAGTCAGTGA
CAGTGGTGCTGTCTGTTTATGGGACACTAAAGAACAGAAAATGTTGAAGA
AATTCACAGACCATAAAGCTCCTGGCACATGCTTGTCATTCTCACCGCTC
AATGATATGTTATTGTGTTCATCTGGACTTGACAAGCGAATCATATTCTA
TGATGTGATTGGAAAAAAAACCATTTCAATCCAGTAACGTATTGTCAATT
CAACTACAACGACAACATCATTGCATCGTCATCTGATCACGGTGACATCA
TTTTGACCAACGTCTCCAGTGGTGAATGCTCAGATCCGCTCACTGGCAAT
GATGATTCGCAGATTCAACAATCAAGTGTAGCATTCAACGGGCATTCCAG
ATACTTGGTCAGTGGTGGCTTGGATTGTGTCATCAATATTTGGGACATCA
AATCAAGAACTGTCAAAAGAACCTACAAGGTCAGTATGTGGCTTACACAT
ATGAGGAGGTTGGGATTCGTATCAGCAGTATGTCTGATGATGACCTACCT
GTTATTGAGATTCCCACACCGATGAGTCTGCTTGTAACAGCTGGTGAAGA
TGTCCGTCTATGGAATGTTCCAGACCTCAGTTTACAAAAAGTACGGAATG
GAACTAATGCCAATGTACTTCACTGTATATGCAGTCCCAATGGACAGTAA
AGACGATCAATACAGAAGGGCCGATCACTTCTTGTGACTTTTTCAGTGAT
GGGTGCACTGNGGCTGTTCGCTGTCTTGGTTATTCCCACTTTTCAAGATC
ACTCTTGGCTTCAGTCAGTGACAGTGGTGCTGTCTGTTTATGGGACACTA
AAGAACAGAAAATGTTGAAGAAATTCACAGACCATAAAGCTCCTGGCACA
TGCTTGTCATTCTCACCGCTCAATGATATGTTATTGTGTTCATCTGGACT
TGACAAGCGAATCATATTCTATGATGTGATTGGAAAAAAAACCATTTCAA
TCCAGTAACGTATTGTCAATTCAACTACAACGACAACATCATTGCATCGT
CATCTGATCACGGTGACATCATTTTGACCAACGTCTCCAGTGGTGAATGC
TCAGATCCGCTCACTGGCAATGATGATTCGCAGATTCAACAATCAAGTGT
AGCATTCAACGGGCATTCCAGATACTTGGTCAGTGGTGGCTTGGATTGTG
TCATCAATATTTGGGACATCAAATCAAGAACTGTCAAAAGAACCTACAAG
GTCAGTATGTGGCTTACACATATGAGGAGGTTGGGATTCGTATCAGCAGT
ATGTCTGATGATGACCTACCTGTTATTGAGATTCCCACACCGATGAGTCT
GCTTGTAACAGCTGGTGAAGATGTCCGTCTATGGAATGTTCCAGACCTCA
GTTTACAAAAAGTACGGAATGGAACTAATGCCAATGTACTTCACTGTATA
TGCAGTCCCAATGGACAGTAAAGACGATCAATACAGAAGGGCCGATCACT
TCTTGTGACTTTTTCAGTGATGGGTGCACTGNGGCTGTTCGCTGTCTTGG
TTATTCCCACTTTTCAAGATCACTCTTGGCTTCAGTCAGTGACAGTGGTG
CTGTCTGTTTATGGGACACTAAAGAACAGAAAATGTTGAAGAAATTCACA
GACCATAAAGCTCCTGGCACATGCTTGTCATTCTCACCGCTCAATGATAT
GTTATTGTGTTCATCTGGACTTGACAAGCGAATCATATTCTATGATGTGA
TTGGAAAAAAAACCATTTCAATCCAGTAACGTATTGTCAATTCAACTACA
ACGACAACATCATTGCATCGTCATCTGATCACGGTGACATCATTTTGACC
AACGTCTCCAGTGGTGAATGCTCAGATCCGCTCACTGGCAATGATGATTC
GCAGATTCAACAATCAAGTGTAGCATTCAACGGGCATTCCAGATACTTGG
TCAGTGGTGGCTTGGATTGTGTCATCAATATTTGGGACATCAAATCAAGA
ACTGTCAAAAGAACCTACAAGGTCAGTATGTGGCTTACACATATGAGGAG
GTTGGGATTCGTATCAGCAGTATGTCTGATGATGACCTACCTGTTATTGA
GATTCCCACACCGATGAGTCTGCTTGTAACAGCTGGTGAAGATGTCCGTC
TATGGAATGTTCCAGACCTCAGTTTACAAAAAGTACGGAATGGAACTAAT
GCCAATGTACTTCACTGTATATGCAGTCCCAATGGACAGTAAAGACGATC
AATACAGAAGGGCCGATCACTTCTTGTGACTTTTTCAGTGATGGGTGCAC
TGNGGCTGTTCGCTGTCTTGGTTATTCCCACTTTTCAAGATCACTCTTGG
CTTCAGTCAGTGACAGTGGTGCTGTCTGTTTATGGGACACTAAAGAACAG
AAAATGTTGAAGAAATTCACAGACCATAAAGCTCCTGGCACATGCTTGTC
ATTCTCACCGCTCAATGATATGTTATTGTGTTCATCTGGACTTGACAAGC
GAATCATATTCTATGATGTGATTGGAAAAAAAACCATTTCAATCCAGTAA
CGTATTGTCAATTCAACTACAACGACAACATCATTGCATCGTCATCTGAT
CACGGTGACATCATTTTGACCAACGTCTCCAGTGGTGAATGCTCAGATCC
GCTCACTGGCAATGATGATTCGCAGATTCAACAATCAAGTGTAGCATTCA
ACGGGCATTCCAGATACTTGGTCAGTGGTGGCTTGGATTGTGTCATCAAT
ATTTGGGACATCAAATCAAGAACTGTCAAAAGAACCTACAAGGTCAGTAT
GTGGCTTACACATATGAGGAGGTTGGGATTCGTATCAGCAGTATGTCTGA
TGATGACCTACCTGTTATTGAGATTCCCACACCGATGAGTCTGCTTGTAA
CAGCTGGTGAAGATGTCCGTCTATGGAATGTTCCAGACCTCAGTTTACAA
AAAGTACGGAATGGAACTAATGCCAATGTACTTCACTGTATATGCAGTCC
CAATGGACAGTAAAGACGATCAATACAGAAGGGCCGATCACTTCTTGTGA
CTTTTTCAGTGATGGGTGCACTGNGGCTGTTCGCTGTCTTGGTTATTCCC
ACTTTTCAAGATCACTCTTGGCTTCAGTCAGTGACAGTGGTGCTGTCTGT
TTATGGGACACTAAAGAACAGAAAATGTTGAAGAAATTCACAGACCATAA
AGCTCCTGGCACATGCTTGTCATTCTCACCGCTCAATGATATGTTATTGT
GTTCATCTGGACTTGACAAGCGAATCATATTCTATGATGTGATTGGAAAA
AAAACCATTTCAATCCAGTAACGTATTGTCAATTCAACTACAACGACAAC
ATCATTGCATCGTCATCTGATCACGGTGACATCATTTTGACCAACGTCTC
CAGTGGTGAATGCTCAGATCCGCTCACTGGCAATGATGATTCGCAGATTC
AACAATCAAGTGTAGCATTCAACGGGCATTCCAGATACTTGGTCAGTGGT
GGCTTGGATTGTGTCATCAATATTTGGGACATCAAATCAAGAACTGTCAA
AAGAACCTACAAGGTCAGTATGTGGCTTACACATATGAGGAGGTTGGGAT
TCGTATCAGCAGTATGTCTGATGATGACCTACCTGTTATTGAGATTCCCA
CACCGATGAGTCTGCTTGTAACAGCTGGTGAAGATGTCCGTCTATGGAAT
GTTCCAGACCTCAGTTTACAAAAAGTACGGAATGGAACTAATGCCAATGT
ACTTCACTGTATATGCAGTCCCAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039293XLOC_039293Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062709-proteinTCONS_00062709-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062709-exon-scaffold_371-1575043694:24402..24432TCONS_00062709-exon-scaffold_371-1575043694:24402..24432Clytia hemisphaericaexon
TCONS_00062709-exon-scaffold_371-1575043694:2815..2997TCONS_00062709-exon-scaffold_371-1575043694:2815..2997Clytia hemisphaericaexon
TCONS_00062709-exon-scaffold_371-1575043694:2461..2552TCONS_00062709-exon-scaffold_371-1575043694:2461..2552Clytia hemisphaericaexon
TCONS_00062709-exon-scaffold_371-1575043694:1847..1963TCONS_00062709-exon-scaffold_371-1575043694:1847..1963Clytia hemisphaericaexon
TCONS_00062709-exon-scaffold_371-1575043694:1234..1377TCONS_00062709-exon-scaffold_371-1575043694:1234..1377Clytia hemisphaericaexon
TCONS_00062709-exon-scaffold_371-1575043694:799..1025TCONS_00062709-exon-scaffold_371-1575043694:799..1025Clytia hemisphaericaexon
TCONS_00062709-exon-scaffold_371-1575043694:163..232TCONS_00062709-exon-scaffold_371-1575043694:163..232Clytia hemisphaericaexon
TCONS_00062709-exon-scaffold_371-1510915933:24402..24432TCONS_00062709-exon-scaffold_371-1510915933:24402..24432Clytia hemisphaericaexon
TCONS_00062709-exon-scaffold_371-1510915933:2815..2997TCONS_00062709-exon-scaffold_371-1510915933:2815..2997Clytia hemisphaericaexon
TCONS_00062709-exon-scaffold_371-1510915933:2461..2552TCONS_00062709-exon-scaffold_371-1510915933:2461..2552Clytia hemisphaericaexon
TCONS_00062709-exon-scaffold_371-1510915933:1847..1963TCONS_00062709-exon-scaffold_371-1510915933:1847..1963Clytia hemisphaericaexon
TCONS_00062709-exon-scaffold_371-1510915933:1234..1377TCONS_00062709-exon-scaffold_371-1510915933:1234..1377Clytia hemisphaericaexon
TCONS_00062709-exon-scaffold_371-1510915933:799..1025TCONS_00062709-exon-scaffold_371-1510915933:799..1025Clytia hemisphaericaexon
TCONS_00062709-exon-scaffold_371-1510915933:163..232TCONS_00062709-exon-scaffold_371-1510915933:163..232Clytia hemisphaericaexon
TCONS_00062709-exon-scaffold_371-1491911889:24402..24432TCONS_00062709-exon-scaffold_371-1491911889:24402..24432Clytia hemisphaericaexon
TCONS_00062709-exon-scaffold_371-1491911889:2815..2997TCONS_00062709-exon-scaffold_371-1491911889:2815..2997Clytia hemisphaericaexon
TCONS_00062709-exon-scaffold_371-1491911889:2461..2552TCONS_00062709-exon-scaffold_371-1491911889:2461..2552Clytia hemisphaericaexon
TCONS_00062709-exon-scaffold_371-1491911889:1847..1963TCONS_00062709-exon-scaffold_371-1491911889:1847..1963Clytia hemisphaericaexon
TCONS_00062709-exon-scaffold_371-1491911889:1234..1377TCONS_00062709-exon-scaffold_371-1491911889:1234..1377Clytia hemisphaericaexon
TCONS_00062709-exon-scaffold_371-1491911889:799..1025TCONS_00062709-exon-scaffold_371-1491911889:799..1025Clytia hemisphaericaexon
TCONS_00062709-exon-scaffold_371-1491911889:163..232TCONS_00062709-exon-scaffold_371-1491911889:163..232Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_371supercontigscaffold_371:163..24432 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.93306	5.70444	1.71718	0.719996	22.6436	18.7014	17.3396	19.1016	11.8216	16.226	15.3652	9.3069	11.3113	10.3627	9.53448	12.3774	12.483	11.6277	5.87296	7.95317	7.8554	8.65939	10.4956	12.4215	17.5625	16.9197	7.05568	4.04243	10.16	11.0864
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR0110426-blade_b-propeller_TolB-like
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
[Close]
BLAST of TCONS_00062709 vs. Swiss-Prot (Human)
Match: NEDD1 (Protein NEDD1 OS=Homo sapiens GN=NEDD1 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.006e-51
Identity = 105/257 (40.86%), Postives = 153/257 (59.53%), Query Frame = 1 
Query:  103 LVTAGEDVRLWNVPDLSL-QKVRNGTNANVLHCIC--SPNGQYVAYTYEEVGIRISSMSDDDLPVIEIPTPIQQSSVAFNGHSRYLVSGGLDCVINIWDIKSRTVKRTYKNHFNPVTYCQFNYNDNIIASSSDHGDIILTNVSSGECSDPLTGNDDSQAVRCLGYSHFSRSLLASVSDSGAVCLWDTKEQKMLKKFTD-HKAPGTCLSFSPLNDMLLCSSGLDKRIIFYDVIGKKTVKTINTEGPITSCDFFSDGCT 861
              ++G+D+++W+   ++L  K    T+ + +  IC  S N   V  +     I +SS     +P++E+    +Q+ V  N  S YLVSGGL+  +NIWD+KS+ V R+ K+H + VT   +N+ND  IAS S  G+IIL +V++   S P  G+  +Q+VR L YS F +SLL SVSD+G V LWD   Q     F   HKAP + + FSP+N++L  + GLDKRII YD   KK VKT+  + P+T+ DF  DG T
Sbjct:    7 FASSGDDIKIWDASSMTLVDKFNPHTSPHGISSICWSSNNNFLVTASSSGDKIVVSSCKCKPVPLLELAEGQKQTCVNLNSTSMYLVSGGLNNTVNIWDLKSKRVHRSLKDHKDQVTCVTYNWNDCYIASGSLSGEIILHSVTTNLSSTPF-GHGSNQSVRHLKYSLFKKSLLGSVSDNGIVTLWDVNSQSPYHNFDSVHKAPASGICFSPVNELLFVTIGLDKRIILYDTSSKKLVKTLVADTPLTAVDFMPDGAT 262
The following BLAST results are available for this feature:
BLAST of TCONS_00062709 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NEDD11.006e-5140.86Protein NEDD1 OS=Homo sapiens GN=NEDD1 PE=1 SV=1[more]
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