TCONS_00062984 (transcript) - C. hemisphaerica

Overview
NameTCONS_00062984
Unique NameTCONS_00062984
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1665

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00062984 ID=TCONS_00062984|Name=TCONS_00062984|organism=Clytia hemisphaerica|type=transcript|length=1665bp
gaACAAACTACATAGTTGATAAAGAATTCAGCAAGATGTCGAACCCTAAT
TCTGTGGAGACGGATATGAAGCAAATCCGGGAATTCCGGGATGTGCATGA
AACAGCGGAAACGAATGCTTTCATTGAAGAGATGGAACGGTTAGCGAAAG
AGAAGGCGGCCAACAACAGGACCAGTTTGAAGTTAGAAAACGAACGAAAC
GTAAACACAAGacatgaaaagaagaaagatgaaGATAAAGACAAAGCAAT
GGCGGCAAAGAAGAACTTTGAAAAAGAACAAGAGAAAATGTTGGAACCTT
CATTCGAAAAACAATTGATGGAAGAGGAAGGAGAAGCCCAGCCTGAGAAA
CCAGCGATCGACGAAGATGAATGGAAACGAAGAGTGAATGAAGATCTGGT
TGAGAGCTTTTCCATTTTCGACATTGATGGTGATGGGGAGATTTCCATCT
CAGAATTGATGTCAGTGATGGCTTCCGTTGGAAATGACATCTCAGCCGAA
GATGCTGAAGATATCTTTGATGTCGTCGATTCTAACGGTGACGGTAAAAT
AAGTTTTGATGAATTCAAAGAATGTATGTATGAGAAGATGTCTCAACAAA
CGGTGGACGAAGACCTCATCGGAGCCTTCGAAATCTTTGATGAAGACAAA
GATGGTTACATTTCGCCAACAGAAATACAACTGTTATTCAAGAAACTCGG
TGAATTGATCTCCACTGATGAAGCTGTTGAAATTATGAAAGATTGCGATC
TCAACAAGGATGGTCTAATCGATTTCGAAGAATTCAAGGCATTCTACTTG
AAGATTTTCGAGAACCAACCAACTCTCGCTGAACAACTGGTTGCTGAAGC
GGAAGCAGATGAAAAGCAAAAAGTCGCTCTTGCAATGGAAGAAAAAGAAG
CGAGTGGATATCCTCAAGGTGAAGCACCCTCACCCACAGATTACAAATGA
TGATGTGGTGATAGAGAGTTTACTCCTTTGTTGGTTCCGCGTGGTGCTGT
TGTGCGCATGCGCGAGGTTGGTCGGATTTGAAGAAGTTCGGCGTGACATC
ATTTCATTGCGGATTTGATCAAACGGCCCTCATCTGCGGTATACTAACGG
AAAGTTACAGGCCCGTTGAGTGATAAAGTGTCGGAAGAACGAACGATCTT
CTCCCATAACCGGCCCTCGTGATCGAATTCGAAACCAGATTTAATTTGTT
GGGAAAATGTGATACGAACACAACAGAAAATTTGCTAAGATTTGATTTAC
CGAAATTTCATGATTTAATGACTTGTTATAtaggttattttttcataggA
CTTCTTAAGTAGATAGCAGTGCTAGGACAATTTGTTATTTTGATAACTAA
TCTTGCATCATAGCTGAAAGCCCCCTGATTTATTAATGGGAGcgatgaaa
tttattttgattttgaatttcaCCATTCCCAGGCCGAAATAGTAACCTTC
AGTATTAACTGCAATCTTTATCTGATTTAGATCGGTTACTAATCATAAGC
TTGAAATGCTTATAGCGCTCGCTGTTTCGGCTTATTTGTTATCGATGGAT
AAGCTTTCTCATATATAGTTATTCATCTTGAACTTAAAATTGTGTATATT
TTTGTATGAATATTATTtgcatattttgaaaatatgatccttttttctaa
aaaaagaaaattttg
Run BLAST on NCBI

protein sequence of TCONS_00062984-protein

>TCONS_00062984-protein ID=TCONS_00062984-protein|Name=TCONS_00062984-protein|organism=Clytia hemisphaerica|type=polypeptide|length=315bp
TNYIVDKEFSKMSNPNSVETDMKQIREFRDVHETAETNAFIEEMERLAKE
KAANNRTSLKLENERNVNTRHEKKKDEDKDKAMAAKKNFEKEQEKMLEPS
FEKQLMEEEGEAQPEKPAIDEDEWKRRVNEDLVESFSIFDIDGDGEISIS
ELMSVMASVGNDISAEDAEDIFDVVDSNGDGKISFDEFKECMYEKMSQQT
VDEDLIGAFEIFDEDKDGYISPTEIQLLFKKLGELISTDEAVEIMKDCDL
NKDGLIDFEEFKAFYLKIFENQPTLAEQLVAEAEADEKQKVALAMEEKEA
SGYPQGEAPSPTDYK
Run BLAST on NCBI

transcript from alignment at scaffold_375:303611..312631-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00062984 ID=TCONS_00062984|Name=TCONS_00062984|organism=Clytia hemisphaerica|type=transcript|length=9021bp|location=Sequence derived from alignment at scaffold_375:303611..312631- (Clytia hemisphaerica)
GAACAAACTACATAGTTGATAAAGAATTCAGCAAGATGTCGAACCCTAAT
TCTGTGGAGACGGATATGAAGCAAATCCGGGAATTCCGGGATGTGCATGA
AACAGCGGAAACGAATGCTTTCATTGAAGAGATGGAACGGTTAGCGAAAG
AGAAGGCGGCCAACAACAGGACCAGTTTGAAGTTAGAAAACGAACGAAAC
GTAAACACAAGACATGAAAAGAAGAAAGATGAAGATAAAGACAAAGCAAT
GGCGGCAAAGAAGAACTTTGAAAAAGAACAAGAGAAAATGTTGGAACCTT
CATTCGAAAAACAATTGATGGAAGAGGAAGGAGAAGCCCAGCCTGTAAGT
TCTAATGATCTTCTTCAATTTGCGATAATCTGACAATGTGCTCTTCTAAA
ACAACAGTATGTACAATCTAATGGTGAAGCTATCTTGTCCTTCGGGTCTG
GATTTGCTTTGTCAAGGGGGTTGAGGTTTAAAGTTCCAGGGGCATAGTCA
AGAGGGGAAATACTTTTTGACAGGAAATTTCTTTGTATTATTGATGCAGG
CGTAAAGTTTGGTCTAAAGATAGCCAAAAAAACTAACTTTGGCCTCAAAA
TAGTCATTGGTAGCAAGAAAAAGGTCACAGTAAAGTATTCGGATGGGTCT
TTATTAGTATTTTAGCACAGCGGGCAATAATTTTAGTATAATTGAACACA
GGAGAAAGGCCAGTGTCAGAAGTAATGAAGTTCTTTTTCGGGGTAAATTT
GATGCTCGGGGTACAGTACTGCTCTACGTGTATCTGGCGTAAAACTTAAC
GAAGCGTCAGCTACGAAAATGGACTTGGATTTTCTTAGATAACAGGACAT
AATGTCCGGACTTCGGACATTTTCCGACCCAATCGATGAAATGTCCGACC
AAAATAGATTATATCCGACCCATATTTTCAGTCCCTTAAAAATTCAAACA
AAAAAGATTATTTACGTAGATTTGAAATCAGCAACTTCCTTATTTACACA
GAGAAACTCTGCAGTGCGAAAAATGCCCTCCACTAATGTCTATAAATTTT
TAGCGGATCCGATTTTTTGTCCAACCAAAAAACAATCACGTCAGACATGT
CTGACCAATTATTAGCTAAAGATTCATTCGGACATGTCCGACCCAAATTG
ATTTGCTTCGGACATCATGTCCGACCATCAAAATATTGTTACAGTTCAAG
CCCTGGATAACGGTTCTGTTTAAAAACAAGTTTAGTTTATGCTTTATAAG
GAAATATTTACAGCGCCAAAAGTTGATTTTCTGAGTGGATGCATACCTCT
TGGTGAATATAAAAGCAGTCATTATTACTTACAGGAATCAAATTAAATTC
TTAAGAAAATGAAAGGGTTATGGCCGGACCCTGAAACAAAAAAACACGAG
TAAACCGCATTTTTGAATGTATTGTTTGCACACTTTTTGGCCGATAATTT
TATCTCCTTCATTTTACGATCATGTCCTTCATCTGCAATCGTACAGTAAA
AAAATAAATGGTTTGAGCGAATATTATAAAAACTTTTTTGAATTTTTATT
TTCAAAGTTGACTCTTATTCTTTTATGCTATGAGAGGCACTAAAAGCAAG
GTCTCATCAACTGGTACCAGTTTTTTAGGTTATCAAGCTCACTATCTGGA
TAGTAGTCGAACCCAAAAGCTTCACATCACCCGTACCCTTAACTTGTTAA
GTTCCATCTTTCCATCACTCAGTGACCTGATGGACTTTTAAGAGGCCCCT
CCCCCCAGCGGCACCCCTAATCACACCATCACGCAAAAAAAATTTCTCCA
TCACGCATCACGAAAATCGCTAAATTTTGTCATAATAGCCCAAATCACGC
ATCACGCCTCAAATTTTTGTCCTATCACGCATCACGCGAAAATCTTGATC
ACGCCATCACGCCAAAAAAAAATCTCTAATCGCGCCATCACGCAAGAAAA
AAGTCCCAATCACGCCATCACGCAAACCGCTGGGGGTCTCTTTTAAGATA
TACCGCACGGGCGACGACTTTACCTGGATTTTCACTAGGGCAGCGACAAC
GACAAAACTGTCCGTGTAAGCATTAGTAGAGTCTGGTTTGATTTTTCTTG
TATTTAAGCTATAAAATTCCAGTACGTTTCTTTAGTATTTTGTATCGTCT
TTTTTTACTACCCCTAAGGCGCTGCTAAACGCTAAAAGAGCCCATAAACC
GGAAAGAAGAGGTTAGGGTAATAAGCGATCACCTCGACGATGAAATAGTT
AAGTCAATTGCTTAGATATTATATTGCCAGCATTTTCTTGATTTTTGATA
CAATTTCCTGCATCCTTCCAACAGATTTTTTTAAGGTAGGAGGGTTCATT
TTCAAAGTTTTCAAGGTCCCATGGACACCCTGCTAAATCAAAGAACTCCC
TAGCGATGCGAGTACCTCACCAAAAACCGAAAAAAAATTTATTCATTCCA
TTTTTGATGTCAAAGTGACCGAAAACCTGGGCTTCAAACATTCGAAAAAG
TTTCAGAGTGAAATAGACGTTCTGCGTAGAAATAAAGTCGTCTAATATAG
GCTACGGGATTCCAAAGAATCTGGAATTTTTTTACCGGTTTGACATGATA
TTTGAACGAGGAAAGACAGTAAATTTCAAAATATTGACCCGGGGTAAGGA
ATTTCAATTTAATTGGCCGGGGTCACATAGCTATCCAACAAAGGATTGTA
ATCAGGCTATTTTTGGACCGGGTTTGTTTTTTTTAGTCATGAGAAAATGA
TTCTCGCTCTTGTGAAATATCGTGGCTCTAAAGGGGAGGAGTTGAGTGTT
TGAAACATCAATCAAAAGGGAGGGGTTCAAATGGTTCATTTGACTCATTC
TTAATTTACATGACAATGAAATATTAGTTTTAAATTACTTTTATTCTGGA
TTATTAATGACCTTCTTCAAGTTTAATAAATTTGTTATTAATTTTTTTCC
TGGAACGTTTTTGTTTCTTCCAAGTATAATTCAACTTGTCGTCTAGCTAG
ATCTTTATTCAAGACCTCAAAAATTTATGAGACAGGAGAATATAAATGTT
GACATTTATATTGCAAGGCTTAAATCTGATCGAATATCAATCCAAAAGCA
AAGTCTTTCATTCGCCAAAAAAATCATTGAGTTTTTTTCGCATCTTTTTG
CTAGAATTATTGACTTTGACTTTGGTGACGCAATTAGTCTACGATTTCCT
CATTTATTTGCTCAATGTCAAATCTTATAATATATTGATTGACTCTATTG
ATTTCCAATTGGGTTGGTTTCTAGTGAATAGAATCAGAGAATTTTCTCAC
CCTAGGGAACTAAACACACAGAGGATTGAGTAAATGGAAATAGAACCATT
CATGGCTTAATTTATTATTTATTCTGTTTAAACCACTTTAATCCTCCGAT
CCAACTAGTGTAGCCATATCGAAGATGTAATCAATTTTTGCTTGTTCGCT
AGCAACAGTGATTTAAGAAATCAATAAAAAATAATTCTCGGCACTTTCGT
TACATAGGTTTTTCACTTCAAAAGATTTTTTTTAATGTGAGAGAAGATAC
AGTAAAAATTACTTCAGCTTCAAAAGTTTTGATAATTGTTCGACGCACTT
TTGGTGAACTGGGATTGATTTCCTTTGTAAGACCCATTTTGGGGAAGCGA
AAACAGCGATTGATAAATTTTGATAAAGAATACGATAGAAAGTCATTGTA
AATTAGGGAATTAAGTGAAGACTTGTATCCCAGATGTGAAGATAAACGGA
CTTTCTGACTTGACCAACGAATAAGATGAACATTGGTAGCAGTGGATATG
GCGGGAATTTTGGTGAAACACCGCGTTATGGTGACATGGACCAAATGGAG
GATGAACCGGTTGAAGTAAAATATTTTTCTTTTGGTATTTTTAGTCATCG
AACTGTAAATGGATAGTGGAAAAATATCTCCATTAGATGATCCATTTAAA
AAAAGAAAATCTCAAAATTTTAGTGAAAGCTGTGGAATTCGTTAATTTTT
AGACATCCTCAGAAAAATCTAGATATGTCAATTCCAGGCCCTTTTTAGAG
TTCACCCTTAGTACTAGAGTTTATCATTTTCAATACTTTGCTGACCTCTG
ATACAGTAATGACAGATCTTAATAGCTTACGACCTTTATAACTTTCCTTA
ACTCCTCTCAGATCGCAACACTGCTCGTTTCTGGTACTTCTTCAATTTTA
ATAACAACGAAAGATCAAGACAATAATTCAATTTCTTGGTTACCTTACTT
AGTAGCTACGAGTTGCCCCTTCGTTCAACAAGGTTTCAACCAGACTGAAA
AAGCATAAAAAAGATACTTTTCTCAGTTTGTAAGCAACATCATGCATAGA
GAAAGAAAAAAAAAAGGAAATTCATAAGGAAAATTAGTTTTCAAACAATC
ATGAATTTCAATTTTGCACTGAGATGAGCTCGATGTTAGGTACATTGATT
TTCTCGCTGTTGGCCTTACTGCGTTAATTGATAAACTGAAATTCCTTTAA
CAAACTTTTCATTTGTGCTCTGTGAATTGTTTCAAAAGAATCCTTTTACT
TTGTGATAGCTTTTCACCTCGCTATGTATTATGTCCAAATCGTGGGACTG
TGTCAAAAAAATTTTAATCTTAAATCACAAAAAAGTTTTGTCTATTCAGA
TGGTAGAGTTTATGTTTAAGTGGCGAATTTGAGGATTTTTTGTTTGTGAT
GACTGTACAGGCTTACATGCAATTGTTGTTCTTGTGTCGCGTTTAATCCA
GTTTGACTTGTTTTTGAGTTTTTTTTTGGTGTATTTTATGTCGACAAAAA
TTTGCAAAATTTCAGTCTGTTGAATATTCACGAGTACTGGATAGCTTGTG
GTAGCTTTGCATATTTTGTCACGAATTTTCTCGGTTAATTCCTAAAAGAA
AAAAGTTGAAAGCTGCTCTGTATCCAACACTTGTCATTTAATCCAGCTCA
AAATAGTTGTTTTTGATGATTTTCAAGAACTTTTAGAAATAAATCTATTG
CCCTAACACAAACTTTGTGGGAGGAGTACTCGAGAAAAGTATTTTGGGTT
TTTGAATACTTTTATAATTGTGATCAATTTCAGATACTACAACTTTACTT
CGCAGTTTTTTCGACGAATAAGTAGAGTTGTTTTTGTTGTTGTTTTTGTA
GAATTGAAAAGGAAATTTATCGAAACTTTGTTGTAACTTTTTTTTGTTGA
TAAAAATGGCCACCAATGGATACTCACTACAGACGAAAACACGTCGAAAT
TCTGGCCCTGCAGTTTTAGTCTCTTTGAAATTCAAGCAAACAGCGAAAGC
GAAGAATTTAGGTTTACCTCCTCTTGTGAGTTTGAACGGTTTTTTGCAAG
AAGGAACTTCTTCATCTGCACAAACAGATGAAAAGTTGGTTATAAAGGTA
ATGGTTTGCTTATTCGTTTGAATCATGGTTGCGCAGTGTGAACAAAATTC
TGATTGTCTCAGCAATAATTTTTCAGTTTTAGATCGATTAAGTCAAGAAA
ATTATACAGTAGCGCAAGACTCTGCAAGAAAGGCAATGTGTTTGCTCTGT
TATCTTTCCCGAGAAAAAGTAGCTTCAAAGCTTTTACCGTTTCTACTGTC
ATTCTTTCCAAAAATTCTTTTTTCCACCTTGCTTTTTTATGATACTGCTG
ACCTGAGATTTTCGGCAGTAATTGATCGATTTGCTTTCTTTATAAGAAGC
AAGTGAAATTTTTAACGTTTTTATTTTCCAGCACTTTAACGTCTTTGCTC
TCTCGTCAGATCTTAAATTTGTGTGTTATTATCATAGTATTCCATTTTCT
TTACAAACTAACAAACTAGGCTCAAAAACGCCAACAAATGAGAGAAAAAA
TAAGCTGAGCCTGGAATGGCTGAGCAAATAAACTAGGCTTAAAGAGCTGA
AAAATAGGAACAGACGAGCCTCAATAAGAATTTCATGTTCTTATAAAAAA
GAGTGTATCTGCATTAAAATATCAGTCCATTCCCTCTGATTTTTTGGCAT
TTTTGCTTCCTTCTTCGTTATGAAATTACTCCAATAAAAAAGACTACAAA
TGTTCTTATCCTTTGATACGTGCCTGAATCACTGAAAAAAGGGGGACAAT
TTGTTTGAAAGTAGTATGTTGGTGTCAGAACCTTTAGCAACAATGGCATC
CTTTTCTATGTGTTAGCATGACGTCATCATGTCATTGTTTATGCACAGCT
TGNGTATGTTGGTGTCAGAACTTTTAGCAACAATGGCATCCTTTTCTATG
TGTTAGCATGACGTCATCATGTCATTGTTTATGCACAGCTTGAAATGTTA
CGAGTTATTTCTGCGTGGGAATATTGTGGGATGACTATTTATACCCTCTG
TTTAATAAAGATTCCGTTATGTTTATGAAGTGGAAGAAATTTTAAAACTT
TTCGACATTGAACGTTTATAAAGTCAAGACCGCATCCTCGTCGTTTTCCT
TCAGCCCCTAATTTGCTGGAATTTTCATTTGCCTTGATTTTAGTAAGTCG
AAAATAGTAAACAATTTAAGTGAAAATTACCAACGAATATTAGGACCTTC
TTCAAAAATAGTTCTCTTTTTTTCACAGGAGAAACCAGCGATCGACGAAG
ATGAATGGAAACGAAGAGTGAATGAAGGTAAAGACCCGTTTCATTTGCAA
ACCTAACTTCTCATTATTTGCCACAAGTTTTAATTATTCTTGCACTTTGA
GTTCAACTCATATTGTAGATTCCTTTATTCGAAAAGATTTTCGGTACGTT
GTTTTACTTATCGCATTTCTGTGCTTCCAATCAATCCGATTGGTTAAATC
TCAAAACAATCCAAATCAACCAATCAGGTTTCAAAAAAGTGATTTGATTG
TCGAGGCGGACTTTTGGATGATTGATCGTAAGTACGGTACTTTTCCAATC
AGTACGGTACTTTTCCAATCCCTTAAAAACATTTTAATTTGTTGTGATCT
ACTTTGGTCTAATTTTCTTAAATATTACATTTTCAAGGCTCTACAAAGCC
TATGAATTCTCATCATGAATTTTTGGCTTTCTGTGCTCATCATTAAAAAT
GCTGATTTTTCTTCTGCAGATCTGGTTGAGAGCTTTTCCATTTTCGACAT
TGATGGTGATGGGGAGATTTCCATCTCAGAATTGATGTCAGTGATGGCTT
CCGTTGGAAATGACATCTCAGCCGAAGATGCTGAAGATATCTTTGATGTC
GTCGATTCTAACGGTACGGTTATGATCAAGTTTATTTTTTAGAATAACAC
CTTGTCACAACATTATTGAGAACCGGTTTATTTGTGTACAGCTCAAGGTG
CAATAGAACTCTTAATTCCAGCCGCGAAAGGTGCGGGCAATTTTCCATCT
TTTAGTATCTAGCTCTTTAACATTTTCCTCAACTATTTAAGATTCCTATC
AAACTAATCGGTCAGATTATTTTCAAGTAGATATTAAAAAAAGACTCAAT
TCATGCCATATCTATTCCCAAATCTATTTATTTCTGGGATTTAACGACGG
TTTCCTTCTTTTTCAGGTGACGGTAAAATAAGTTTTGATGAATTCAAAGA
ATGTATGTATGAGAAGATGTCTCAACAAACGGTGGACGAAGACCTCATCG
GAGCCTTCGAAATCTTTGATGAAGACAAAGATGGTTACATTTCGCCAACA
GAAATACAACTGTTATTCAAGAAACTCGGTGAATTGATCTCCACTGATGA
AGCTGTTGAAATTATGAAAGATTGCGATCTCAACAAGGATGGTCTAATCG
ATTTCGAAGGTATATCTTATCTAATACCTAAATCTTGGTTGAAATCTCCT
AGTAATGAGAGGTATGCTGGGTCTTTTAGGTCTCTTGACGATCATCAAGA
AAAATTAATTTACCCCATCCAATATATTATTATCGGGAAATTGTATAGTC
CAATATCCTTGGAGTTTTACTGCTAACGACTTGGCATTTCTACGTTGATC
AAAATATTCAAATGAAATAAACTTTATTGGTGTGAATATTTCTCTTGCCT
CCGTATTTGAAATTACTTAAAGACTGATGAAGATACGCGGTTATCCGCAC
ACTGCCAAACCCTCTCGCCATTTTAGATCGCGAAAATTTGGAAATGAAAT
TTAATTTTAATTTTTTGTTTAATCTTTTCTTTACAGAATTCAAGGCATTC
TACTTGAAGATTTTCGAGAACCAACCAACTCTCGCTGAACAACTGGTTGC
TGAAGCGGAAGCAGATGAAAAGCAAAAAGTCGCTCTTGCAATGGAAGAAA
AAGAAGCGAGTGGATATCCTCAAGGTGAAGCACCCTCACCCACAGATTAC
AAATGATGATGTGGTGATAGAGAGTTTACTCCTTTGTTGGTTCCGCGTGG
TGCTGTTGTGCGCATGCGCGAGGTTGGTCGGATTTGAAGAAGTTCGGCGT
GACATCATTTCATTGCGGATTTGATCAAACGGCCCTCATCTGCGGTATAC
TAACGGAAAGTTACAGGCCCGTTGAGTGATAAAGTGTCGGAAGAACGAAC
GATCTTCTCCCATAACCGGCCCTCGTGATCGAATTCGAAACCAGATTTAA
TTTGTTGGGAAAATGTGATACGAACACAACAGAAAATTTGCTAAGATTTG
ATTTACCGAAATTTCATGATTTAATGACTTGTTATATAGGTTATTTTTTC
ATAGGACTTCTTAAGTAGATAGCAGTGCTAGGACAATTTGTTATTTTGAT
AACTAATCTTGCATCATAGCTGAAAGCCCCCTGATTTATTAATGGGAGCG
ATGAAATTTATTTTGATTTTGAATTTCACCATTCCCAGGCCGAAATAGTA
ACCTTCAGTATTAACTGCAATCTTTATCTGATTTAGATCGGTTACTAATC
ATAAGCTTGAAATGCTTATAGCGCTCGCTGTTTCGGCTTATTTGTTATCG
ATGGATAAGCTTTCTCATATATAGTTATTCATCTTGAACTTAAAATTGTG
TATATTTTTGTATGAATATTATTTGCATATTTTGAAAATATGATCCTTTT
TTCTAAAAAAAGAAAATTTTG

Coding sequence (CDS) from alignment at scaffold_375:303611..312631-

>TCONS_00062984 ID=TCONS_00062984|Name=TCONS_00062984|organism=Clytia hemisphaerica|type=CDS|length=4740bp|location=Sequence derived from alignment at scaffold_375:303611..312631- (Clytia hemisphaerica)
AATTCAAGGCATTCTACTTGAAGATTTTCGAGAACCAACCAACTCTCGCT
GAACAACTGGTTGCTGAAGCGGAAGCAGATGAAAAGCAAAAAGTCGCTCT
TGCAATGGAAGAAAAAGAAGCGAGTGGATATCCTCAAGGTGAAGCACCCT
CACCCACAGATTACAAATGAGTGACGGTAAAATAAGTTTTGATGAATTCA
AAGAATGTATGTATGAGAAGATGTCTCAACAAACGGTGGACGAAGACCTC
ATCGGAGCCTTCGAAATCTTTGATGAAGACAAAGATGGTTACATTTCGCC
AACAGAAATACAACTGTTATTCAAGAAACTCGGTGAATTGATCTCCACTG
ATGAAGCTGTTGAAATTATGAAAGATTGCGATCTCAACAAGGATGGTCTA
ATCGATTTCGAAGATCTGGTTGAGAGCTTTTCCATTTTCGACATTGATGG
TGATGGGGAGATTTCCATCTCAGAATTGATGTCAGTGATGGCTTCCGTTG
GAAATGACATCTCAGCCGAAGATGCTGAAGATATCTTTGATGTCGTCGAT
TCTAACGGAGAAACCAGCGATCGACGAAGATGAATGGAAACGAAGAGTGA
ATGAAGACAAACTACATAGTTGATAAAGAATTCAGCAAGATGTCGAACCC
TAATTCTGTGGAGACGGATATGAAGCAAATCCGGGAATTCCGGGATGTGC
ATGAAACAGCGGAAACGAATGCTTTCATTGAAGAGATGGAACGGTTAGCG
AAAGAGAAGGCGGCCAACAACAGGACCAGTTTGAAGTTAGAAAACGAACG
AAACGTAAACACAAGACATGAAAAGAAGAAAGATGAAGATAAAGACAAAG
CAATGGCGGCAAAGAAGAACTTTGAAAAAGAACAAGAGAAAATGTTGGAA
CCTTCATTCGAAAAACAATTGATGGAAGAGGAAGGAGAAGCCCAGCCTAA
TTCAAGGCATTCTACTTGAAGATTTTCGAGAACCAACCAACTCTCGCTGA
ACAACTGGTTGCTGAAGCGGAAGCAGATGAAAAGCAAAAAGTCGCTCTTG
CAATGGAAGAAAAAGAAGCGAGTGGATATCCTCAAGGTGAAGCACCCTCA
CCCACAGATTACAAATGAGTGACGGTAAAATAAGTTTTGATGAATTCAAA
GAATGTATGTATGAGAAGATGTCTCAACAAACGGTGGACGAAGACCTCAT
CGGAGCCTTCGAAATCTTTGATGAAGACAAAGATGGTTACATTTCGCCAA
CAGAAATACAACTGTTATTCAAGAAACTCGGTGAATTGATCTCCACTGAT
GAAGCTGTTGAAATTATGAAAGATTGCGATCTCAACAAGGATGGTCTAAT
CGATTTCGAAGATCTGGTTGAGAGCTTTTCCATTTTCGACATTGATGGTG
ATGGGGAGATTTCCATCTCAGAATTGATGTCAGTGATGGCTTCCGTTGGA
AATGACATCTCAGCCGAAGATGCTGAAGATATCTTTGATGTCGTCGATTC
TAACGGAGAAACCAGCGATCGACGAAGATGAATGGAAACGAAGAGTGAAT
GAAGACAAACTACATAGTTGATAAAGAATTCAGCAAGATGTCGAACCCTA
ATTCTGTGGAGACGGATATGAAGCAAATCCGGGAATTCCGGGATGTGCAT
GAAACAGCGGAAACGAATGCTTTCATTGAAGAGATGGAACGGTTAGCGAA
AGAGAAGGCGGCCAACAACAGGACCAGTTTGAAGTTAGAAAACGAACGAA
ACGTAAACACAAGACATGAAAAGAAGAAAGATGAAGATAAAGACAAAGCA
ATGGCGGCAAAGAAGAACTTTGAAAAAGAACAAGAGAAAATGTTGGAACC
TTCATTCGAAAAACAATTGATGGAAGAGGAAGGAGAAGCCCAGCCTAATT
CAAGGCATTCTACTTGAAGATTTTCGAGAACCAACCAACTCTCGCTGAAC
AACTGGTTGCTGAAGCGGAAGCAGATGAAAAGCAAAAAGTCGCTCTTGCA
ATGGAAGAAAAAGAAGCGAGTGGATATCCTCAAGGTGAAGCACCCTCACC
CACAGATTACAAATGAGTGACGGTAAAATAAGTTTTGATGAATTCAAAGA
ATGTATGTATGAGAAGATGTCTCAACAAACGGTGGACGAAGACCTCATCG
GAGCCTTCGAAATCTTTGATGAAGACAAAGATGGTTACATTTCGCCAACA
GAAATACAACTGTTATTCAAGAAACTCGGTGAATTGATCTCCACTGATGA
AGCTGTTGAAATTATGAAAGATTGCGATCTCAACAAGGATGGTCTAATCG
ATTTCGAAGATCTGGTTGAGAGCTTTTCCATTTTCGACATTGATGGTGAT
GGGGAGATTTCCATCTCAGAATTGATGTCAGTGATGGCTTCCGTTGGAAA
TGACATCTCAGCCGAAGATGCTGAAGATATCTTTGATGTCGTCGATTCTA
ACGGAGAAACCAGCGATCGACGAAGATGAATGGAAACGAAGAGTGAATGA
AGACAAACTACATAGTTGATAAAGAATTCAGCAAGATGTCGAACCCTAAT
TCTGTGGAGACGGATATGAAGCAAATCCGGGAATTCCGGGATGTGCATGA
AACAGCGGAAACGAATGCTTTCATTGAAGAGATGGAACGGTTAGCGAAAG
AGAAGGCGGCCAACAACAGGACCAGTTTGAAGTTAGAAAACGAACGAAAC
GTAAACACAAGACATGAAAAGAAGAAAGATGAAGATAAAGACAAAGCAAT
GGCGGCAAAGAAGAACTTTGAAAAAGAACAAGAGAAAATGTTGGAACCTT
CATTCGAAAAACAATTGATGGAAGAGGAAGGAGAAGCCCAGCCTAATTCA
AGGCATTCTACTTGAAGATTTTCGAGAACCAACCAACTCTCGCTGAACAA
CTGGTTGCTGAAGCGGAAGCAGATGAAAAGCAAAAAGTCGCTCTTGCAAT
GGAAGAAAAAGAAGCGAGTGGATATCCTCAAGGTGAAGCACCCTCACCCA
CAGATTACAAATGAGTGACGGTAAAATAAGTTTTGATGAATTCAAAGAAT
GTATGTATGAGAAGATGTCTCAACAAACGGTGGACGAAGACCTCATCGGA
GCCTTCGAAATCTTTGATGAAGACAAAGATGGTTACATTTCGCCAACAGA
AATACAACTGTTATTCAAGAAACTCGGTGAATTGATCTCCACTGATGAAG
CTGTTGAAATTATGAAAGATTGCGATCTCAACAAGGATGGTCTAATCGAT
TTCGAAGATCTGGTTGAGAGCTTTTCCATTTTCGACATTGATGGTGATGG
GGAGATTTCCATCTCAGAATTGATGTCAGTGATGGCTTCCGTTGGAAATG
ACATCTCAGCCGAAGATGCTGAAGATATCTTTGATGTCGTCGATTCTAAC
GGAGAAACCAGCGATCGACGAAGATGAATGGAAACGAAGAGTGAATGAAG
ACAAACTACATAGTTGATAAAGAATTCAGCAAGATGTCGAACCCTAATTC
TGTGGAGACGGATATGAAGCAAATCCGGGAATTCCGGGATGTGCATGAAA
CAGCGGAAACGAATGCTTTCATTGAAGAGATGGAACGGTTAGCGAAAGAG
AAGGCGGCCAACAACAGGACCAGTTTGAAGTTAGAAAACGAACGAAACGT
AAACACAAGACATGAAAAGAAGAAAGATGAAGATAAAGACAAAGCAATGG
CGGCAAAGAAGAACTTTGAAAAAGAACAAGAGAAAATGTTGGAACCTTCA
TTCGAAAAACAATTGATGGAAGAGGAAGGAGAAGCCCAGCCTAATTCAAG
GCATTCTACTTGAAGATTTTCGAGAACCAACCAACTCTCGCTGAACAACT
GGTTGCTGAAGCGGAAGCAGATGAAAAGCAAAAAGTCGCTCTTGCAATGG
AAGAAAAAGAAGCGAGTGGATATCCTCAAGGTGAAGCACCCTCACCCACA
GATTACAAATGAGTGACGGTAAAATAAGTTTTGATGAATTCAAAGAATGT
ATGTATGAGAAGATGTCTCAACAAACGGTGGACGAAGACCTCATCGGAGC
CTTCGAAATCTTTGATGAAGACAAAGATGGTTACATTTCGCCAACAGAAA
TACAACTGTTATTCAAGAAACTCGGTGAATTGATCTCCACTGATGAAGCT
GTTGAAATTATGAAAGATTGCGATCTCAACAAGGATGGTCTAATCGATTT
CGAAGATCTGGTTGAGAGCTTTTCCATTTTCGACATTGATGGTGATGGGG
AGATTTCCATCTCAGAATTGATGTCAGTGATGGCTTCCGTTGGAAATGAC
ATCTCAGCCGAAGATGCTGAAGATATCTTTGATGTCGTCGATTCTAACGG
AGAAACCAGCGATCGACGAAGATGAATGGAAACGAAGAGTGAATGAAGAC
AAACTACATAGTTGATAAAGAATTCAGCAAGATGTCGAACCCTAATTCTG
TGGAGACGGATATGAAGCAAATCCGGGAATTCCGGGATGTGCATGAAACA
GCGGAAACGAATGCTTTCATTGAAGAGATGGAACGGTTAGCGAAAGAGAA
GGCGGCCAACAACAGGACCAGTTTGAAGTTAGAAAACGAACGAAACGTAA
ACACAAGACATGAAAAGAAGAAAGATGAAGATAAAGACAAAGCAATGGCG
GCAAAGAAGAACTTTGAAAAAGAACAAGAGAAAATGTTGGAACCTTCATT
CGAAAAACAATTGATGGAAGAGGAAGGAGAAGCCCAGCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039445XLOC_039445Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062984-exon-scaffold_375-1575043694:312288..312631TCONS_00062984-exon-scaffold_375-1575043694:312288..312631Clytia hemisphaericaexon
TCONS_00062984-exon-scaffold_375-1575043694:306005..306053TCONS_00062984-exon-scaffold_375-1575043694:306005..306053Clytia hemisphaericaexon
TCONS_00062984-exon-scaffold_375-1575043694:305419..305562TCONS_00062984-exon-scaffold_375-1575043694:305419..305562Clytia hemisphaericaexon
TCONS_00062984-exon-scaffold_375-1575043694:304873..305115TCONS_00062984-exon-scaffold_375-1575043694:304873..305115Clytia hemisphaericaexon
TCONS_00062984-exon-scaffold_375-1575043694:303611..304495TCONS_00062984-exon-scaffold_375-1575043694:303611..304495Clytia hemisphaericaexon
TCONS_00062984-exon-scaffold_375-1510915933:312288..312631TCONS_00062984-exon-scaffold_375-1510915933:312288..312631Clytia hemisphaericaexon
TCONS_00062984-exon-scaffold_375-1510915933:306005..306053TCONS_00062984-exon-scaffold_375-1510915933:306005..306053Clytia hemisphaericaexon
TCONS_00062984-exon-scaffold_375-1510915933:305419..305562TCONS_00062984-exon-scaffold_375-1510915933:305419..305562Clytia hemisphaericaexon
TCONS_00062984-exon-scaffold_375-1510915933:304873..305115TCONS_00062984-exon-scaffold_375-1510915933:304873..305115Clytia hemisphaericaexon
TCONS_00062984-exon-scaffold_375-1510915933:303611..304495TCONS_00062984-exon-scaffold_375-1510915933:303611..304495Clytia hemisphaericaexon
TCONS_00062984-exon-scaffold_375-1491911889:312288..312631TCONS_00062984-exon-scaffold_375-1491911889:312288..312631Clytia hemisphaericaexon
TCONS_00062984-exon-scaffold_375-1491911889:306005..306053TCONS_00062984-exon-scaffold_375-1491911889:306005..306053Clytia hemisphaericaexon
TCONS_00062984-exon-scaffold_375-1491911889:305419..305562TCONS_00062984-exon-scaffold_375-1491911889:305419..305562Clytia hemisphaericaexon
TCONS_00062984-exon-scaffold_375-1491911889:304873..305115TCONS_00062984-exon-scaffold_375-1491911889:304873..305115Clytia hemisphaericaexon
TCONS_00062984-exon-scaffold_375-1491911889:303611..304495TCONS_00062984-exon-scaffold_375-1491911889:303611..304495Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00062984-proteinTCONS_00062984-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_375supercontigscaffold_375:303611..312631 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.44514	1.70048	0.32812	0.2448	2.56306	2.06017	1.94228	2.32246	1.91805	2.45649	1.81972	2.2954	3.17217	2.90864	4.13891	5.2425	20.4288	3.7251	2.03947	3.04409	21.6327	20.2152	12.6589	10.3202	16.4614	12.5412	1.03575	0.713151	21.0326	26.8303
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
Blast
[Close]
BLAST of TCONS_00062984 vs. Swiss-Prot (Human)
Match: CALM3 (Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.236e-24
Identity = 50/128 (39.06%), Postives = 85/128 (66.41%), Query Frame = 3 
Query:  402 ESFSIFDIDGDGEISISELMSVMASVGNDISAEDAEDIFDVVDSNGDGKISFDEFKECMYEKMSQQTVDEDLIGAFEIFDEDKDGYISPTEIQLLFKKLGELISTDEAVEIMKDCDLNKDGLIDFEEF 785
            E+FS+FD DGDG I+  EL +VM S+G + +  + +D+ + VD++G+G I F EF   M  KM     +E++  AF +FD+D +GYIS  E++ +   LGE ++ +E  E++++ D++ DG +++EEF
Sbjct:   15 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
The following BLAST results are available for this feature:
BLAST of TCONS_00062984 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CALM31.236e-2439.06Calmodulin-3 OS=Homo sapiens GN=CALM3 PE=1 SV=1[more]
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