XLOC_039445 (gene) - C. hemisphaerica

Overview
NameXLOC_039445
Unique NameXLOC_039445
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_375:303611..312631-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039445 ID=XLOC_039445|Name=XLOC_039445|organism=Clytia hemisphaerica|type=gene|length=9021bp|location=Sequence derived from alignment at scaffold_375:303611..312631- (Clytia hemisphaerica)
GAACAAACTACATAGTTGATAAAGAATTCAGCAAGATGTCGAACCCTAAT TCTGTGGAGACGGATATGAAGCAAATCCGGGAATTCCGGGATGTGCATGA AACAGCGGAAACGAATGCTTTCATTGAAGAGATGGAACGGTTAGCGAAAG AGAAGGCGGCCAACAACAGGACCAGTTTGAAGTTAGAAAACGAACGAAAC GTAAACACAAGACATGAAAAGAAGAAAGATGAAGATAAAGACAAAGCAAT GGCGGCAAAGAAGAACTTTGAAAAAGAACAAGAGAAAATGTTGGAACCTT CATTCGAAAAACAATTGATGGAAGAGGAAGGAGAAGCCCAGCCTGTAAGT TCTAATGATCTTCTTCAATTTGCGATAATCTGACAATGTGCTCTTCTAAA ACAACAGTATGTACAATCTAATGGTGAAGCTATCTTGTCCTTCGGGTCTG GATTTGCTTTGTCAAGGGGGTTGAGGTTTAAAGTTCCAGGGGCATAGTCA AGAGGGGAAATACTTTTTGACAGGAAATTTCTTTGTATTATTGATGCAGG CGTAAAGTTTGGTCTAAAGATAGCCAAAAAAACTAACTTTGGCCTCAAAA TAGTCATTGGTAGCAAGAAAAAGGTCACAGTAAAGTATTCGGATGGGTCT TTATTAGTATTTTAGCACAGCGGGCAATAATTTTAGTATAATTGAACACA GGAGAAAGGCCAGTGTCAGAAGTAATGAAGTTCTTTTTCGGGGTAAATTT GATGCTCGGGGTACAGTACTGCTCTACGTGTATCTGGCGTAAAACTTAAC GAAGCGTCAGCTACGAAAATGGACTTGGATTTTCTTAGATAACAGGACAT AATGTCCGGACTTCGGACATTTTCCGACCCAATCGATGAAATGTCCGACC AAAATAGATTATATCCGACCCATATTTTCAGTCCCTTAAAAATTCAAACA AAAAAGATTATTTACGTAGATTTGAAATCAGCAACTTCCTTATTTACACA GAGAAACTCTGCAGTGCGAAAAATGCCCTCCACTAATGTCTATAAATTTT TAGCGGATCCGATTTTTTGTCCAACCAAAAAACAATCACGTCAGACATGT CTGACCAATTATTAGCTAAAGATTCATTCGGACATGTCCGACCCAAATTG ATTTGCTTCGGACATCATGTCCGACCATCAAAATATTGTTACAGTTCAAG CCCTGGATAACGGTTCTGTTTAAAAACAAGTTTAGTTTATGCTTTATAAG GAAATATTTACAGCGCCAAAAGTTGATTTTCTGAGTGGATGCATACCTCT TGGTGAATATAAAAGCAGTCATTATTACTTACAGGAATCAAATTAAATTC TTAAGAAAATGAAAGGGTTATGGCCGGACCCTGAAACAAAAAAACACGAG TAAACCGCATTTTTGAATGTATTGTTTGCACACTTTTTGGCCGATAATTT TATCTCCTTCATTTTACGATCATGTCCTTCATCTGCAATCGTACAGTAAA AAAATAAATGGTTTGAGCGAATATTATAAAAACTTTTTTGAATTTTTATT TTCAAAGTTGACTCTTATTCTTTTATGCTATGAGAGGCACTAAAAGCAAG GTCTCATCAACTGGTACCAGTTTTTTAGGTTATCAAGCTCACTATCTGGA TAGTAGTCGAACCCAAAAGCTTCACATCACCCGTACCCTTAACTTGTTAA GTTCCATCTTTCCATCACTCAGTGACCTGATGGACTTTTAAGAGGCCCCT CCCCCCAGCGGCACCCCTAATCACACCATCACGCAAAAAAAATTTCTCCA TCACGCATCACGAAAATCGCTAAATTTTGTCATAATAGCCCAAATCACGC ATCACGCCTCAAATTTTTGTCCTATCACGCATCACGCGAAAATCTTGATC ACGCCATCACGCCAAAAAAAAATCTCTAATCGCGCCATCACGCAAGAAAA AAGTCCCAATCACGCCATCACGCAAACCGCTGGGGGTCTCTTTTAAGATA TACCGCACGGGCGACGACTTTACCTGGATTTTCACTAGGGCAGCGACAAC GACAAAACTGTCCGTGTAAGCATTAGTAGAGTCTGGTTTGATTTTTCTTG TATTTAAGCTATAAAATTCCAGTACGTTTCTTTAGTATTTTGTATCGTCT TTTTTTACTACCCCTAAGGCGCTGCTAAACGCTAAAAGAGCCCATAAACC GGAAAGAAGAGGTTAGGGTAATAAGCGATCACCTCGACGATGAAATAGTT AAGTCAATTGCTTAGATATTATATTGCCAGCATTTTCTTGATTTTTGATA CAATTTCCTGCATCCTTCCAACAGATTTTTTTAAGGTAGGAGGGTTCATT TTCAAAGTTTTCAAGGTCCCATGGACACCCTGCTAAATCAAAGAACTCCC TAGCGATGCGAGTACCTCACCAAAAACCGAAAAAAAATTTATTCATTCCA TTTTTGATGTCAAAGTGACCGAAAACCTGGGCTTCAAACATTCGAAAAAG TTTCAGAGTGAAATAGACGTTCTGCGTAGAAATAAAGTCGTCTAATATAG GCTACGGGATTCCAAAGAATCTGGAATTTTTTTACCGGTTTGACATGATA TTTGAACGAGGAAAGACAGTAAATTTCAAAATATTGACCCGGGGTAAGGA ATTTCAATTTAATTGGCCGGGGTCACATAGCTATCCAACAAAGGATTGTA ATCAGGCTATTTTTGGACCGGGTTTGTTTTTTTTAGTCATGAGAAAATGA TTCTCGCTCTTGTGAAATATCGTGGCTCTAAAGGGGAGGAGTTGAGTGTT TGAAACATCAATCAAAAGGGAGGGGTTCAAATGGTTCATTTGACTCATTC TTAATTTACATGACAATGAAATATTAGTTTTAAATTACTTTTATTCTGGA TTATTAATGACCTTCTTCAAGTTTAATAAATTTGTTATTAATTTTTTTCC TGGAACGTTTTTGTTTCTTCCAAGTATAATTCAACTTGTCGTCTAGCTAG ATCTTTATTCAAGACCTCAAAAATTTATGAGACAGGAGAATATAAATGTT GACATTTATATTGCAAGGCTTAAATCTGATCGAATATCAATCCAAAAGCA AAGTCTTTCATTCGCCAAAAAAATCATTGAGTTTTTTTCGCATCTTTTTG CTAGAATTATTGACTTTGACTTTGGTGACGCAATTAGTCTACGATTTCCT CATTTATTTGCTCAATGTCAAATCTTATAATATATTGATTGACTCTATTG ATTTCCAATTGGGTTGGTTTCTAGTGAATAGAATCAGAGAATTTTCTCAC CCTAGGGAACTAAACACACAGAGGATTGAGTAAATGGAAATAGAACCATT CATGGCTTAATTTATTATTTATTCTGTTTAAACCACTTTAATCCTCCGAT CCAACTAGTGTAGCCATATCGAAGATGTAATCAATTTTTGCTTGTTCGCT AGCAACAGTGATTTAAGAAATCAATAAAAAATAATTCTCGGCACTTTCGT TACATAGGTTTTTCACTTCAAAAGATTTTTTTTAATGTGAGAGAAGATAC AGTAAAAATTACTTCAGCTTCAAAAGTTTTGATAATTGTTCGACGCACTT TTGGTGAACTGGGATTGATTTCCTTTGTAAGACCCATTTTGGGGAAGCGA AAACAGCGATTGATAAATTTTGATAAAGAATACGATAGAAAGTCATTGTA AATTAGGGAATTAAGTGAAGACTTGTATCCCAGATGTGAAGATAAACGGA CTTTCTGACTTGACCAACGAATAAGATGAACATTGGTAGCAGTGGATATG GCGGGAATTTTGGTGAAACACCGCGTTATGGTGACATGGACCAAATGGAG GATGAACCGGTTGAAGTAAAATATTTTTCTTTTGGTATTTTTAGTCATCG AACTGTAAATGGATAGTGGAAAAATATCTCCATTAGATGATCCATTTAAA AAAAGAAAATCTCAAAATTTTAGTGAAAGCTGTGGAATTCGTTAATTTTT AGACATCCTCAGAAAAATCTAGATATGTCAATTCCAGGCCCTTTTTAGAG TTCACCCTTAGTACTAGAGTTTATCATTTTCAATACTTTGCTGACCTCTG ATACAGTAATGACAGATCTTAATAGCTTACGACCTTTATAACTTTCCTTA ACTCCTCTCAGATCGCAACACTGCTCGTTTCTGGTACTTCTTCAATTTTA ATAACAACGAAAGATCAAGACAATAATTCAATTTCTTGGTTACCTTACTT AGTAGCTACGAGTTGCCCCTTCGTTCAACAAGGTTTCAACCAGACTGAAA AAGCATAAAAAAGATACTTTTCTCAGTTTGTAAGCAACATCATGCATAGA GAAAGAAAAAAAAAAGGAAATTCATAAGGAAAATTAGTTTTCAAACAATC ATGAATTTCAATTTTGCACTGAGATGAGCTCGATGTTAGGTACATTGATT TTCTCGCTGTTGGCCTTACTGCGTTAATTGATAAACTGAAATTCCTTTAA CAAACTTTTCATTTGTGCTCTGTGAATTGTTTCAAAAGAATCCTTTTACT TTGTGATAGCTTTTCACCTCGCTATGTATTATGTCCAAATCGTGGGACTG TGTCAAAAAAATTTTAATCTTAAATCACAAAAAAGTTTTGTCTATTCAGA TGGTAGAGTTTATGTTTAAGTGGCGAATTTGAGGATTTTTTGTTTGTGAT GACTGTACAGGCTTACATGCAATTGTTGTTCTTGTGTCGCGTTTAATCCA GTTTGACTTGTTTTTGAGTTTTTTTTTGGTGTATTTTATGTCGACAAAAA TTTGCAAAATTTCAGTCTGTTGAATATTCACGAGTACTGGATAGCTTGTG GTAGCTTTGCATATTTTGTCACGAATTTTCTCGGTTAATTCCTAAAAGAA AAAAGTTGAAAGCTGCTCTGTATCCAACACTTGTCATTTAATCCAGCTCA AAATAGTTGTTTTTGATGATTTTCAAGAACTTTTAGAAATAAATCTATTG CCCTAACACAAACTTTGTGGGAGGAGTACTCGAGAAAAGTATTTTGGGTT TTTGAATACTTTTATAATTGTGATCAATTTCAGATACTACAACTTTACTT CGCAGTTTTTTCGACGAATAAGTAGAGTTGTTTTTGTTGTTGTTTTTGTA GAATTGAAAAGGAAATTTATCGAAACTTTGTTGTAACTTTTTTTTGTTGA TAAAAATGGCCACCAATGGATACTCACTACAGACGAAAACACGTCGAAAT TCTGGCCCTGCAGTTTTAGTCTCTTTGAAATTCAAGCAAACAGCGAAAGC GAAGAATTTAGGTTTACCTCCTCTTGTGAGTTTGAACGGTTTTTTGCAAG AAGGAACTTCTTCATCTGCACAAACAGATGAAAAGTTGGTTATAAAGGTA ATGGTTTGCTTATTCGTTTGAATCATGGTTGCGCAGTGTGAACAAAATTC TGATTGTCTCAGCAATAATTTTTCAGTTTTAGATCGATTAAGTCAAGAAA ATTATACAGTAGCGCAAGACTCTGCAAGAAAGGCAATGTGTTTGCTCTGT TATCTTTCCCGAGAAAAAGTAGCTTCAAAGCTTTTACCGTTTCTACTGTC ATTCTTTCCAAAAATTCTTTTTTCCACCTTGCTTTTTTATGATACTGCTG ACCTGAGATTTTCGGCAGTAATTGATCGATTTGCTTTCTTTATAAGAAGC AAGTGAAATTTTTAACGTTTTTATTTTCCAGCACTTTAACGTCTTTGCTC TCTCGTCAGATCTTAAATTTGTGTGTTATTATCATAGTATTCCATTTTCT TTACAAACTAACAAACTAGGCTCAAAAACGCCAACAAATGAGAGAAAAAA TAAGCTGAGCCTGGAATGGCTGAGCAAATAAACTAGGCTTAAAGAGCTGA AAAATAGGAACAGACGAGCCTCAATAAGAATTTCATGTTCTTATAAAAAA GAGTGTATCTGCATTAAAATATCAGTCCATTCCCTCTGATTTTTTGGCAT TTTTGCTTCCTTCTTCGTTATGAAATTACTCCAATAAAAAAGACTACAAA TGTTCTTATCCTTTGATACGTGCCTGAATCACTGAAAAAAGGGGGACAAT TTGTTTGAAAGTAGTATGTTGGTGTCAGAACCTTTAGCAACAATGGCATC CTTTTCTATGTGTTAGCATGACGTCATCATGTCATTGTTTATGCACAGCT TGNGTATGTTGGTGTCAGAACTTTTAGCAACAATGGCATCCTTTTCTATG TGTTAGCATGACGTCATCATGTCATTGTTTATGCACAGCTTGAAATGTTA CGAGTTATTTCTGCGTGGGAATATTGTGGGATGACTATTTATACCCTCTG TTTAATAAAGATTCCGTTATGTTTATGAAGTGGAAGAAATTTTAAAACTT TTCGACATTGAACGTTTATAAAGTCAAGACCGCATCCTCGTCGTTTTCCT TCAGCCCCTAATTTGCTGGAATTTTCATTTGCCTTGATTTTAGTAAGTCG AAAATAGTAAACAATTTAAGTGAAAATTACCAACGAATATTAGGACCTTC TTCAAAAATAGTTCTCTTTTTTTCACAGGAGAAACCAGCGATCGACGAAG ATGAATGGAAACGAAGAGTGAATGAAGGTAAAGACCCGTTTCATTTGCAA ACCTAACTTCTCATTATTTGCCACAAGTTTTAATTATTCTTGCACTTTGA GTTCAACTCATATTGTAGATTCCTTTATTCGAAAAGATTTTCGGTACGTT GTTTTACTTATCGCATTTCTGTGCTTCCAATCAATCCGATTGGTTAAATC TCAAAACAATCCAAATCAACCAATCAGGTTTCAAAAAAGTGATTTGATTG TCGAGGCGGACTTTTGGATGATTGATCGTAAGTACGGTACTTTTCCAATC AGTACGGTACTTTTCCAATCCCTTAAAAACATTTTAATTTGTTGTGATCT ACTTTGGTCTAATTTTCTTAAATATTACATTTTCAAGGCTCTACAAAGCC TATGAATTCTCATCATGAATTTTTGGCTTTCTGTGCTCATCATTAAAAAT GCTGATTTTTCTTCTGCAGATCTGGTTGAGAGCTTTTCCATTTTCGACAT TGATGGTGATGGGGAGATTTCCATCTCAGAATTGATGTCAGTGATGGCTT CCGTTGGAAATGACATCTCAGCCGAAGATGCTGAAGATATCTTTGATGTC GTCGATTCTAACGGTACGGTTATGATCAAGTTTATTTTTTAGAATAACAC CTTGTCACAACATTATTGAGAACCGGTTTATTTGTGTACAGCTCAAGGTG CAATAGAACTCTTAATTCCAGCCGCGAAAGGTGCGGGCAATTTTCCATCT TTTAGTATCTAGCTCTTTAACATTTTCCTCAACTATTTAAGATTCCTATC AAACTAATCGGTCAGATTATTTTCAAGTAGATATTAAAAAAAGACTCAAT TCATGCCATATCTATTCCCAAATCTATTTATTTCTGGGATTTAACGACGG TTTCCTTCTTTTTCAGGTGACGGTAAAATAAGTTTTGATGAATTCAAAGA ATGTATGTATGAGAAGATGTCTCAACAAACGGTGGACGAAGACCTCATCG GAGCCTTCGAAATCTTTGATGAAGACAAAGATGGTTACATTTCGCCAACA GAAATACAACTGTTATTCAAGAAACTCGGTGAATTGATCTCCACTGATGA AGCTGTTGAAATTATGAAAGATTGCGATCTCAACAAGGATGGTCTAATCG ATTTCGAAGGTATATCTTATCTAATACCTAAATCTTGGTTGAAATCTCCT AGTAATGAGAGGTATGCTGGGTCTTTTAGGTCTCTTGACGATCATCAAGA AAAATTAATTTACCCCATCCAATATATTATTATCGGGAAATTGTATAGTC CAATATCCTTGGAGTTTTACTGCTAACGACTTGGCATTTCTACGTTGATC AAAATATTCAAATGAAATAAACTTTATTGGTGTGAATATTTCTCTTGCCT CCGTATTTGAAATTACTTAAAGACTGATGAAGATACGCGGTTATCCGCAC ACTGCCAAACCCTCTCGCCATTTTAGATCGCGAAAATTTGGAAATGAAAT TTAATTTTAATTTTTTGTTTAATCTTTTCTTTACAGAATTCAAGGCATTC TACTTGAAGATTTTCGAGAACCAACCAACTCTCGCTGAACAACTGGTTGC TGAAGCGGAAGCAGATGAAAAGCAAAAAGTCGCTCTTGCAATGGAAGAAA AAGAAGCGAGTGGATATCCTCAAGGTGAAGCACCCTCACCCACAGATTAC AAATGATGATGTGGTGATAGAGAGTTTACTCCTTTGTTGGTTCCGCGTGG TGCTGTTGTGCGCATGCGCGAGGTTGGTCGGATTTGAAGAAGTTCGGCGT GACATCATTTCATTGCGGATTTGATCAAACGGCCCTCATCTGCGGTATAC TAACGGAAAGTTACAGGCCCGTTGAGTGATAAAGTGTCGGAAGAACGAAC GATCTTCTCCCATAACCGGCCCTCGTGATCGAATTCGAAACCAGATTTAA TTTGTTGGGAAAATGTGATACGAACACAACAGAAAATTTGCTAAGATTTG ATTTACCGAAATTTCATGATTTAATGACTTGTTATATAGGTTATTTTTTC ATAGGACTTCTTAAGTAGATAGCAGTGCTAGGACAATTTGTTATTTTGAT AACTAATCTTGCATCATAGCTGAAAGCCCCCTGATTTATTAATGGGAGCG ATGAAATTTATTTTGATTTTGAATTTCACCATTCCCAGGCCGAAATAGTA ACCTTCAGTATTAACTGCAATCTTTATCTGATTTAGATCGGTTACTAATC ATAAGCTTGAAATGCTTATAGCGCTCGCTGTTTCGGCTTATTTGTTATCG ATGGATAAGCTTTCTCATATATAGTTATTCATCTTGAACTTAAAATTGTG TATATTTTTGTATGAATATTATTTGCATATTTTGAAAATATGATCCTTTT TTCTAAAAAAAGAAAATTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062984TCONS_00062984Clytia hemisphaericatranscript
TCONS_00062983TCONS_00062983Clytia hemisphaericatranscript
TCONS_00062982TCONS_00062982Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062984-proteinTCONS_00062984-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_375supercontigscaffold_375:303611..312631 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.97 1.78 0.79 0.6 2.56 2.18 1.94 2.55 3.51 4.39 3.41 4.07 8.77 8.12 4.78 5.73 22.57 6.43 25.24 29.96 26.53 24.18 13.69 14.5 18.38 15.83 1.04 0.71 53.25 43.07