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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063124 ID=TCONS_00063124|Name=TCONS_00063124|organism=Clytia hemisphaerica|type=transcript|length=1496bp
ACGTATAAAAAGCAGGCTAATCATCGAGGCCTGGTTATTAATACCTCTGA
TCCTTAACGAGGACACATCAACTGGCATAGAACaattttgtcgttttttg
tcAGAATTTTGACAGACGAAATAGATAAAGGATTTTGATAATCTTATATA
CTTTTTGAGAcaagataaaattttgaaattctaaatTCTTTGAAGATAAA
AACCATTggcattttttgttttgaaagtcatTTTGGTTAATTAAAGAACA
AATATGGACCTTCACACTATCTTTGTTGTTTTAATTATTCTGCTGGTCAG
TATATTACACATCGAAGCAAGACCCAAATTAACAGTCAGACAAATCATTC
GTAAAAACATGGAACGAATCTGGATGGACGGTTATGAGACtggtaaaaaa
tcaaaaaagaaaatgaaaatatacgAACGCGACGTTTCACATCTAGTCAC
TGATGAAGATTTCAGTATTTGTAGAGCTGGCAGACTTCTACCTGGAGTAT
ATTGTCAACATTTAACTTACGAAAATGGCTCCTTCATCGGAACAAATAGA
GAGTTACGTGGGAATGAAGGTATATTTCAAATTGAGAGCTACGGTACTGG
TATAGTTCGAATCAAATACGTTCCAACTGGTCTTTACCTTATCATCAACG
AGTTTGGAAGAATCAATGCCACTAATGACAAATCAAATCTGGAGACGTTA
TTCTATAGCACGTTAGAAGAGATAACGTATTTAGAAACTTTTGCATCAGC
TAAATACTACATGAGAGAAGATAATGTTGAGGGTGCGCCGAATAAAGATT
TGTTAATTGGAGTCAAAGTAAAAGGTGACACGTGTAAAATCAAAAATGCT
AAGAATACGAAATCGGACAGTCGTAGCGATCAATTTTCCTTCCTGCAAGA
ATCTGATCAAagtttttattgcaaaagagACCGGTAGTATAACTGTAGGA
AATTGTAGGTATATTTATATGTTTAAAGTTTGATTACACTCTAAGGTTCA
ATAAGATTTGAAAGATGATATTGATGAAAAATTCAGGATCTTCGGATAAA
CCTTTGAGGTGTGCCAATTGATAGTagtatttttagaataaaaagaTTTA
ATCGAAAAATTTAATTAGTCagtatttattttctttatatatttatgtta
tttacaaaaaaagcccaaatttttcaaattacgattaaatttacaaaaaa
aacgaTAACAAAATTTTGAACCTTTAATCTGACCATATTAATGGTATATG
AGAACTGGTATATGAGAACTGTTTTCGCAGAATTAAGCTGAAAGGACTTG
AACTAGATATATGCTGCACAAGATAACGTTTATAGAAACCAACTATTTAT
TATTactgaaaattgataatttttttgtaaataaagagGGACCGGGGTCA
AAAtacaataaattatttttgtccTAGTTTCCCTCACTAAATTATTagac
gaaaaaagatttttaaattggaaTATAGTATATATTATTATGTGTA Run BLAST on NCBI protein sequence of TCONS_00063124-protein >TCONS_00063124-protein ID=TCONS_00063124-protein|Name=TCONS_00063124-protein|organism=Clytia hemisphaerica|type=polypeptide|length=227bp
MDLHTIFVVLIILLVSILHIEARPKLTVRQIIRKNMERIWMDGYETGKKS
KKKMKIYERDVSHLVTDEDFSICRAGRLLPGVYCQHLTYENGSFIGTNRE
LRGNEGIFQIESYGTGIVRIKYVPTGLYLIINEFGRINATNDKSNLETLF
YSTLEEITYLETFASAKYYMREDNVEGAPNKDLLIGVKVKGDTCKIKNAK
NTKSDSRSDQFSFLQESDQSFYCKRDR Run BLAST on NCBI transcript from alignment at scaffold_380:42296..45400+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063124 ID=TCONS_00063124|Name=TCONS_00063124|organism=Clytia hemisphaerica|type=transcript|length=3105bp|location=Sequence derived from alignment at scaffold_380:42296..45400+ (Clytia hemisphaerica)
ACGTATAAAAAGCAGGCTAATCATCGAGGCCTGGTTATTAATACCTCTGA
TCCTTAACGAGGACACATCAACTGGCATAGAACaattttgtcgttttttg
tcAGAATTTTGACAGACGAAATAGATAAAGGATTTTGATAATCTTATATA
CTTTTTGAGAcaagataaaattttgaaattctaaatTCTTTGAAGATAAA
AACCATTggcattttttgttttgaaagtcatTTTGGTTAATTAAAGAACA
AATATGGACCTTCACACTATCTTTGTTGTTTTAATTGTAAGTATATCATT
TAATGAATATTCCATTCAAATTGGGTAATCAAATAACCTTCCTTTTTTAG
GAAAGAATTGCCCCTTTTGACCTTCTCCCTTAAAGAATTATTTACTGGAt
gtacattttatttttcatcaatAATAGATATGCTTATTTTATGATCAACC
AAGCACCAAtaagttttaattgtttttgcaaaatcatttttttgtaatta
acaAACGAACGATAATGCGGACAATTAGATACTAATTTCAGGCACGGACA
GGATTTCCTTGAACTGCTTTCGGCAATTAAGTTACCAAAAGTACAAacca
aagaaaaaacaaacatatttTTAGCATGTTTTGATTAATTAAAGGTTAAT
TACTTTGGTTTTTAATTACCTCTGCTTTGTCaataatgttttaattttgt
gTTATAGTTTTAAAACTTCGAGGCTCAAACAAGGAAGTCTGAATTGATAG
GACGCCATATTAATTGTTCAActtaaaatcacttacaaaattttttttgg
aattctttTTTAAACAGATTCTGCTGGTCAGTATATTACACATCGAAGCA
AGACCCAAATTAACAGTCAGACAAATCATTCGTAAAAACATGGAACGAAT
CTGGATGGACGGTTATGAGACtggtaaaaaatcaaaaaagaaaatgaaaa
tatacgAACGCGACGTTTCACATCTAGTCACTGATGAAGATTTCAGTATT
TGTAGAGCTGGCAGACTTCTACCTGGAGTATATTGTCAACATTTAACTTA
CGAAAATGGCTCCTTCATCGGAACAAATAGAGAGTTACGTGGGAATGAAG
gtaaattttaaggattttcatAATACTCCGAGTACCTTTTTAGGATCAAA
ACCAATGTTGTTCTAACACTATTATTCAAAGAATTGAATATATAcagttc
aaaatttttaagaGCCATTCTGATAATACCTGAGAAAAGCGACGATAAAG
GCAACACATGTTCAAGTCTGGTGACAGAAGGAATTCCAAGCTTTTTAATG
ACAGTTACACATAGATCTTATGACAAATTGTGATAGAATTGATGATTGAG
ACATTAAAATCGTTAAAATTCATCAcagttttcagaaattttaaatgCTT
AAAATACCATTTAAAAGataaaactttcattttgaacTAGTAGGGCTAGC
CTTTAGAAAAGAAAGCAAGATATAGTGACGTAATAGAATACATCCTTTAG
ACATAATTGGAATGTCTGCCTAATAGATGATACCTAGTaacctttgttta
ctttttccgTTCTCATGCTTTTTATAAGTCTACATAAGACATACAACAGG
CAATGCCTCAGGGTTTCCTTCTTAAATACCAAATCAATAGAGTAAAGGAT
GTCTATCAAAATTCAATACTGCTTTCTGAATTTGTTAATGACAAaacaaa
acgcttaaaaataacTAGCAGTTTCACTTGAAATATGTCCCTAAAAATTC
AACAGCTATGATATAATATGATTATACCATTTAATTTAACCCTTCAAACC
CAGGAGACTTGCTTACACGTTAATCTGTCAATATATCAAGTCCTATAGCT
CCTGATCACTTGATTTAGAAGGGCATAAACCAATCAAAAAATGTTACGGT
CTGGAAAAGTTAAATATCATGAAGACCGCTAAATAAGTTGTTATTTCGTT
TATTTCAGGTATATTTCAAATTGAGAGCTACGGTACTGGTATAGTTCGAA
TCAAATACGTTCCAACTGGTCTTTACCTTATCATCAACGAGTTTGGAAGA
ATCAATGCCACTAATGTAAGTATCTTAGAAGAATTTTCACGGTGAAACCT
TTTTACCTTTCCCAAGCTACTGTTTCAATAACATCTTAAAATGATTAATG
TcagatttttgtgaaaactgAATTCTCAGTATCTACATAATATTGAGATT
GAGGAATTTTTTGCAGCATCCTAAGTTATTTGACCTAAGTAAGAGTCTCG
AATTAACCATAGTTTGTATGTTTTACAATTTTCAGGACAAATCAAATCTG
GAGACGTTATTCTATAGCACGTTAGAAGAGATAACGTATTTAGAAACTTT
TGCATCAGCTAAATACTACATGAGAGAAGATAATGTTGAGGGTGCGCCGA
ATAAAGATTTGTTAATTGGAGTCAAAGTAAAAGGTGACACGTGTAAAATC
AAAAATGCTAAGAATACGAAATCGGACAGTCGTAGCGATCAATTTTCCTT
CCTGCAAGAATCTGATCAAagtttttattgcaaaagagACCGGTAGTATA
ACTGTAGGAAATTGTAGGTATATTTATATGTTTAAAGTTTGATTACACTC
TAAGGTTCAATAAGATTTGAAAGATGATATTGATGAAAAATTCAGGATCT
TCGGATAAACCTTTGAGGTGTGCCAATTGATAGTagtatttttagaataa
aaagaTTTAATCGAAAAATTTAATTAGTCagtatttattttctttatata
tttatgttatttacaaaaaaagcccaaatttttcaaattacgattaaatt
tacaaaaaaaacgaTAACAAAATTTTGAACCTTTAATCTGACCATATTAA
TGGTATATGAGAACTGGTATATGAGAACTGTTTTCGCAGAATTAAGCTGA
AAGGACTTGAACTAGATATATGCTGCACAAGATAACGTTTATAGAAACCA
ACTATTTATTATTactgaaaattgataatttttttgtaaataaagagGGA
CCGGGGTCAAAAtacaataaattatttttgtccTAGTTTCCCTCACTAAA
TTATTagacgaaaaaagatttttaaattggaaTATAGTATATATTATTAT
GTGTA Coding sequence (CDS) from alignment at scaffold_380:42296..45400+ >TCONS_00063124 ID=TCONS_00063124|Name=TCONS_00063124|organism=Clytia hemisphaerica|type=CDS|length=2736bp|location=Sequence derived from alignment at scaffold_380:42296..45400+ (Clytia hemisphaerica)
ATGGACCTTCACACTATCTTTGTTGTTTTAATTATTCTGCTGGTCAGTAT
ATTACACATCGAAGCAAGACCCAAATTAACAGTCAGACAAATCATTCGTA
AAAACATGGAACGAATCTGGATGGACGGTTATGAGACtggtaaaaaatca
aaaaagaaaatgaaaatatacgAACGCGACGTTTCACATCTAGTCACTGA
TGAAGATTTCAGTATTTGTAGAGCTGGCAGACTTCTACCTGGAGTATATT
GTCAACATTTAACTTACGAAAATGGCTCCTTCATCGGAACAAATAGAGAG
TTACGTGGGAATGAAGGTATATTTCAAATTGAGAGCTACGGTACTGGTAT
AGTTCGAATCAAATACGTTCCAACTGGTCTTTACCTTATCATCAACGAGT
TTGGAAGAATCAATGCCACTAATGACAAATCAAATCTGGAGACGTTATTC
TATAGCACGTTAGAAGAGATAACGTATTTAGAAACTTTTGCATCAGCTAA
ATACTACATGAGAGAAGATAATGTTGAGGGTGCGCCGAATAAAGATTTGT
TAATTGGAGTCAAAGTAAAAGGTGACACGTGTAAAATCAAAAATGCTAAG
AATACGAAATCGGACAGTCGTAGCGATCAATTTTCCTTCCTGCAAGAATC
TGATCAAagtttttattgcaaaagagACCGGTAGATGGACCTTCACACTA
TCTTTGTTGTTTTAATTATTCTGCTGGTCAGTATATTACACATCGAAGCA
AGACCCAAATTAACAGTCAGACAAATCATTCGTAAAAACATGGAACGAAT
CTGGATGGACGGTTATGAGACtggtaaaaaatcaaaaaagaaaatgaaaa
tatacgAACGCGACGTTTCACATCTAGTCACTGATGAAGATTTCAGTATT
TGTAGAGCTGGCAGACTTCTACCTGGAGTATATTGTCAACATTTAACTTA
CGAAAATGGCTCCTTCATCGGAACAAATAGAGAGTTACGTGGGAATGAAG
GTATATTTCAAATTGAGAGCTACGGTACTGGTATAGTTCGAATCAAATAC
GTTCCAACTGGTCTTTACCTTATCATCAACGAGTTTGGAAGAATCAATGC
CACTAATGACAAATCAAATCTGGAGACGTTATTCTATAGCACGTTAGAAG
AGATAACGTATTTAGAAACTTTTGCATCAGCTAAATACTACATGAGAGAA
GATAATGTTGAGGGTGCGCCGAATAAAGATTTGTTAATTGGAGTCAAAGT
AAAAGGTGACACGTGTAAAATCAAAAATGCTAAGAATACGAAATCGGACA
GTCGTAGCGATCAATTTTCCTTCCTGCAAGAATCTGATCAAagtttttat
tgcaaaagagACCGGTAGATGGACCTTCACACTATCTTTGTTGTTTTAAT
TATTCTGCTGGTCAGTATATTACACATCGAAGCAAGACCCAAATTAACAG
TCAGACAAATCATTCGTAAAAACATGGAACGAATCTGGATGGACGGTTAT
GAGACtggtaaaaaatcaaaaaagaaaatgaaaatatacgAACGCGACGT
TTCACATCTAGTCACTGATGAAGATTTCAGTATTTGTAGAGCTGGCAGAC
TTCTACCTGGAGTATATTGTCAACATTTAACTTACGAAAATGGCTCCTTC
ATCGGAACAAATAGAGAGTTACGTGGGAATGAAGGTATATTTCAAATTGA
GAGCTACGGTACTGGTATAGTTCGAATCAAATACGTTCCAACTGGTCTTT
ACCTTATCATCAACGAGTTTGGAAGAATCAATGCCACTAATGACAAATCA
AATCTGGAGACGTTATTCTATAGCACGTTAGAAGAGATAACGTATTTAGA
AACTTTTGCATCAGCTAAATACTACATGAGAGAAGATAATGTTGAGGGTG
CGCCGAATAAAGATTTGTTAATTGGAGTCAAAGTAAAAGGTGACACGTGT
AAAATCAAAAATGCTAAGAATACGAAATCGGACAGTCGTAGCGATCAATT
TTCCTTCCTGCAAGAATCTGATCAAagtttttattgcaaaagagACCGGT
AGATGGACCTTCACACTATCTTTGTTGTTTTAATTATTCTGCTGGTCAGT
ATATTACACATCGAAGCAAGACCCAAATTAACAGTCAGACAAATCATTCG
TAAAAACATGGAACGAATCTGGATGGACGGTTATGAGACtggtaaaaaat
caaaaaagaaaatgaaaatatacgAACGCGACGTTTCACATCTAGTCACT
GATGAAGATTTCAGTATTTGTAGAGCTGGCAGACTTCTACCTGGAGTATA
TTGTCAACATTTAACTTACGAAAATGGCTCCTTCATCGGAACAAATAGAG
AGTTACGTGGGAATGAAGGTATATTTCAAATTGAGAGCTACGGTACTGGT
ATAGTTCGAATCAAATACGTTCCAACTGGTCTTTACCTTATCATCAACGA
GTTTGGAAGAATCAATGCCACTAATGACAAATCAAATCTGGAGACGTTAT
TCTATAGCACGTTAGAAGAGATAACGTATTTAGAAACTTTTGCATCAGCT
AAATACTACATGAGAGAAGATAATGTTGAGGGTGCGCCGAATAAAGATTT
GTTAATTGGAGTCAAAGTAAAAGGTGACACGTGTAAAATCAAAAATGCTA
AGAATACGAAATCGGACAGTCGTAGCGATCAATTTTCCTTCCTGCAAGAA
TCTGATCAAagtttttattgcaaaagagACCGGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063124-exon-scaffold_380-1491911889:42296..42581 | TCONS_00063124-exon-scaffold_380-1491911889:42296..42581 | Clytia hemisphaerica | exon |
| TCONS_00063124-exon-scaffold_380-1510915933:42296..42581 | TCONS_00063124-exon-scaffold_380-1510915933:42296..42581 | Clytia hemisphaerica | exon |
| TCONS_00063124-exon-scaffold_380-1575043694:42296..42581 | TCONS_00063124-exon-scaffold_380-1575043694:42296..42581 | Clytia hemisphaerica | exon |
| TCONS_00063124-exon-scaffold_380-1491911889:43113..43395 | TCONS_00063124-exon-scaffold_380-1491911889:43113..43395 | Clytia hemisphaerica | exon |
| TCONS_00063124-exon-scaffold_380-1510915933:43113..43395 | TCONS_00063124-exon-scaffold_380-1510915933:43113..43395 | Clytia hemisphaerica | exon |
| TCONS_00063124-exon-scaffold_380-1575043694:43113..43395 | TCONS_00063124-exon-scaffold_380-1575043694:43113..43395 | Clytia hemisphaerica | exon |
| TCONS_00063124-exon-scaffold_380-1491911889:44254..44360 | TCONS_00063124-exon-scaffold_380-1491911889:44254..44360 | Clytia hemisphaerica | exon |
| TCONS_00063124-exon-scaffold_380-1510915933:44254..44360 | TCONS_00063124-exon-scaffold_380-1510915933:44254..44360 | Clytia hemisphaerica | exon |
| TCONS_00063124-exon-scaffold_380-1575043694:44254..44360 | TCONS_00063124-exon-scaffold_380-1575043694:44254..44360 | Clytia hemisphaerica | exon |
| TCONS_00063124-exon-scaffold_380-1491911889:44581..45400 | TCONS_00063124-exon-scaffold_380-1491911889:44581..45400 | Clytia hemisphaerica | exon |
| TCONS_00063124-exon-scaffold_380-1510915933:44581..45400 | TCONS_00063124-exon-scaffold_380-1510915933:44581..45400 | Clytia hemisphaerica | exon |
| TCONS_00063124-exon-scaffold_380-1575043694:44581..45400 | TCONS_00063124-exon-scaffold_380-1575043694:44581..45400 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_380 | supercontig | scaffold_380:42296..45400 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008083 | growth factor activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0008083 |
growth factor activity |
Blast
The following BLAST results are available for this feature:
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