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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063154 ID=TCONS_00063154|Name=TCONS_00063154|organism=Clytia hemisphaerica|type=transcript|length=547bp
tggGCTGGCTTCCCGTCATTGCGGGGTGTGTCCTCAGAGACCTCCTCCGT
GGCCGGGTCCGTGGTAGGGCGGGGACGCTGGGGTTAGGGCGCTATACGTG
ACATCTTTCTCACAGTGTCTGGGTCCTCCATGATGGGTGCTTCCCCTTGC
AGGTATCCAAGCCTCCTCCATATTTATGGGTATTAGTTTAATGGCAAAAG
GCAAGTTTACATATATCGTTTTCCCCTAGAGAGGGGTATGGGCCCAGTTA
AACAGTAATAAATCAGGACGCAAGAATGATTTCTTGATTTACGTCAATTT
TATATATATAAGTTATATTAATATTCAAGCTTTATATaagtttatttgtt
tttatgttcTCATTTATCTTGTAGGAGTTTAATGTTATTATGTAAATATG
TCTGCAACCATACGTTTTGGGGGCACCTTCGGTTGGGACAAATTTTCTCC
AAAACTTActattcgaggattagccataaaTTTATGCCAAAACTTATATC
TACCAactcacacttacttctcaGCCGACCGACTACCtgattggttt Run BLAST on NCBI transcript from alignment at scaffold_383:172045..173525+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063154 ID=TCONS_00063154|Name=TCONS_00063154|organism=Clytia hemisphaerica|type=transcript|length=1481bp|location=Sequence derived from alignment at scaffold_383:172045..173525+ (Clytia hemisphaerica)
tggGCTGGCTTCCCGTCATTGCGGGGTGTGTCCTCAGAGACCTCCTCCGT
GGCCGGGTCCGTGGTAGGGCGGGGACGCTGGGGTTAGGGCGCTATACGTG
ACATCTTTCTCACAGTGTCTGGGTACTCCATGATGGGTGCTTCCCCTTGC
AGGTATCCAAGCCTCCTCCATATTTATGGGTATTAGTTTAATGGCAAAGG
GCAAGTTTACATATATCGTTTTCCCcagaatattttattttctattataC
TGTTATATGTTCTTTTTGTTACTGTATTGTTCCTAGGGTGTGTATGTTTT
TATCGAGTCCTTATCACAAATAGAGCATCAGTTTTACAGATAGCTGGTCA
AATCTTGGGAAGAAGGCAAGATTTTTGAAGTTATTAGGAAATCACTTCTG
ACACCATAATTGGCTAGTAAAAAGATCCTGCTTGGAGTTTCTGTAAAGGA
GGCACTACTAATAACACGTTTTACGAAGTTACCAATGGCTAGAATTGATA
GCATTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCTGTGGGTAGGCTGGGCTGGCCCGTCATTGCGGGG
TGTTTCCTCAGTGACCTCCTCCGTGGCCGGGTCTGTGGGTAGGCTGGGCT
GGCTCCCCGTCATTGCAGGGTGTGTCCTCAGAGACCTCCTCCGTGGCAGG
TTCTGTGGTAGGGCTGGGCTGGCTTCCCGTCATTGCGGGGTGTGTCCTCA
GTGACCTCCTCCGTGGCCGGGTCTGGGGTTAGGCAGGGCTGGCTTCCCGT
CATTGCGGGGTGTGTCCTCAGAGACCTCCTCCGTGGCCGGGTCCGTGGTA
GGGCGGGGACGCTGGGGTTAGGGCGCTAAACGTGACATCTTTCTCACAGT
GTCTGGGTCCTCCATGATGGGTGCTTCCCCTTGCAGGTATCCAAGCCTCC
TCCATATTTATGGGTATTAGTTTAATGGCAAAAGGCAAGTTTACATATAT
CGTTTTCCCCTAGAGAGGGGTATGGGCCCAGTTAAACAGTAATAAATCAG
GACGCAAGAATGATTTCTTGATTTACGTCAATTTTATATATATAAGTTAT
ATTAATATTCAAGCTTTATATaagtttatttgtttttatgttcTCATTTA
TCTTGTAGGAGTTTAATGTTATTATGTAAATATGTCTGCAACCATACGTT
TTGGGGGCACCTTCGGTTGGGACAAATTTTCTCCAAAACTTActattcga
ggattagccataaaTTTATGCCAAAACTTATATCTACCAactcacactta
cttctcaGCCGACCGACTACCtgattggttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063154-exon-scaffold_383-1491911889:172045..172146 | TCONS_00063154-exon-scaffold_383-1491911889:172045..172146 | Clytia hemisphaerica | exon |
| TCONS_00063154-exon-scaffold_383-1510915933:172045..172146 | TCONS_00063154-exon-scaffold_383-1510915933:172045..172146 | Clytia hemisphaerica | exon |
| TCONS_00063154-exon-scaffold_383-1575043694:172045..172146 | TCONS_00063154-exon-scaffold_383-1575043694:172045..172146 | Clytia hemisphaerica | exon |
| TCONS_00063154-exon-scaffold_383-1491911889:173081..173525 | TCONS_00063154-exon-scaffold_383-1491911889:173081..173525 | Clytia hemisphaerica | exon |
| TCONS_00063154-exon-scaffold_383-1510915933:173081..173525 | TCONS_00063154-exon-scaffold_383-1510915933:173081..173525 | Clytia hemisphaerica | exon |
| TCONS_00063154-exon-scaffold_383-1575043694:173081..173525 | TCONS_00063154-exon-scaffold_383-1575043694:173081..173525 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_383 | supercontig | scaffold_383:172045..173525 + |
Blast
The following BLAST results are available for this feature:
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