TCONS_00063191 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063191
Unique NameTCONS_00063191
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1601

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063191 ID=TCONS_00063191|Name=TCONS_00063191|organism=Clytia hemisphaerica|type=transcript|length=1601bp
AAATGCCGTGATCTGATTCGTTACTTTCTCACTCTTgcaaatcaaaattt
gagattAGCAAAAGGTTTGATTAAAAGATTACTTTTAGGTCGTTCCTCTT
GCTACTTCACTCTAAAGTCTGTTTATCACATTTGTTTCCTGGTTTGAATA
AATAAGATGGagcaaattaaaaagaaaatggcaATACTTAGAGAGAAGCT
TGAAAAGGCTGAGGAACGTTCCAAAAAAGCTGAAGACGAACTACAAAACT
CAAACAACAAAGCTGAAGAGTCTGAAACAGAAGTTGGGCGTCTGCAAAAA
GAATTGGGAAATTTAGAAGACGAATTAGACACATCTGAAACTAAATTGGC
AAAGATCACTGCAAGGTTACATGAGGCAGAAAAACAGGCAGATGAAAGTG
AGCGTGCTCGACGTGTTTTGGAAGACCGTGGTCAAACAGACGATGACAGG
TTAGCTAAACTACAAGCAGAATACGAAGATGTTGTCTCCAAAAATGCAGA
TGTGGAAGATCGATACTCACAGatttcttcgGAAATTGAAGATTTAGAAC
GACATCTCGAAGATGAAGAACAAAAAGCTGTCCAAGCAGAAGAACGTGTA
AAACACTTGGATAATGAAGTAGTGGTTGTAGGAAACAGTCTAAAGGCTAT
GGAAATAAGCGAAAACCAGGCCAGTGCTAGAGAAAACCAATACACTACTA
AACTCCAAGAAATGAGCACACGGTATCAAGAGGCTGAGTCACGTGCTTCT
AAATACGAAGATCACTCAAAAGAATTGGAATCCACCCTCGATGATTTACA
AGATAAATTGGAGGAGGAAAGGAACCTATACGATAAAGTCAAAGGTGATC
TCGACAATCTCCTGGCTGAGATCCAAAACTTGAATGTCTAAATGAACTAT
TAACTATTGAATGACCACTGATTTCACAAATAAACAAAAGACCCAACATT
TCAACAATGTAATTATCATTTTATTATGCATATTTTAAATTGTATGGTTT
TAGTTACTCTTTTAGTTGCTCTTATTGCTgctgttttgttgttgtttaca
TGTTTGAATTTCATCTTTAGATTAGACCTCTCATAAAATAAACGTCATGA
ATACTTACCTCATTTGAAATAATGATGCAGCTGTCAaccatttaaaggtt
ttgtttttaagtaagagtgatatcgtttgcttactcatcaattttaattc
acaagctttttcacattgaattgacacgaatgtggagcaagatcggtcag
aaagaggaaaagaaaaacattttttgcttatatcagcataatataacaat
agtaagacactgtcctgaaatgaaatatgtgtctgatatgaaacgggaaa
aaATGCACCTGATGCTTATAACATCCAAACAGTTTAGCATAATATCGCAC
TGCCTGGACCTCTCTAAACTAATTTTTTATTGCTAAGTTCAAaaatgttg
tattttttactgtagTTGTTTTTATGAGCATTGTATCTATGTATTTTACT
GTTTATGACCCCCTTAAATAAATTTAGCATCTTTTTTGTGAATGTATATA
TTccttatttgtttttttttctaaaaaatacttcaaataaTATTTATAAG
A
Run BLAST on NCBI

protein sequence of TCONS_00063191-protein

>TCONS_00063191-protein ID=TCONS_00063191-protein|Name=TCONS_00063191-protein|organism=Clytia hemisphaerica|type=polypeptide|length=244bp
MEQIKKKMAILREKLEKAEERSKKAEDELQNSNNKAEESETEVGRLQKEL
GNLEDELDTSETKLAKITARLHEAEKQADESERARRVLEDRGQTDDDRLA
KLQAEYEDVVSKNADVEDRYSQISSEIEDLERHLEDEEQKAVQAEERVKH
LDNEVVVVGNSLKAMEISENQASARENQYTTKLQEMSTRYQEAESRASKY
EDHSKELESTLDDLQDKLEEERNLYDKVKGDLDNLLAEIQNLNV
Run BLAST on NCBI

transcript from alignment at scaffold_384:89286..108678+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063191 ID=TCONS_00063191|Name=TCONS_00063191|organism=Clytia hemisphaerica|type=transcript|length=19393bp|location=Sequence derived from alignment at scaffold_384:89286..108678+ (Clytia hemisphaerica)
AAATGCCGTGATCTGATTCGTTACTTTCTCACTCTTgcaaatcaaaattt
gagattAGCAAAAGGTTTGATTAAAAGATTACTTTTAGGTCGTTCCTCTT
GCTACTTCACTCTAAAGTCTGTTTATCACATTTGTTTCCTGGTTTGAATA
AATAAGATGGagcaaattaaaaagaaaatggcaATACTTAGAGAGAAGCT
TGAAAAGGCTGAGGAACGTTCCAAAAAAGCTGAAGACGAACTACAAAACT
CAAACAACAAAGCTGAAGAGGTATAAATTTTAAACTGTCATGATGTTTGT
TTATGAATCTGTTCATGAATCTGTTCCTCAAAATCCATATGttgatttgt
ttattttcacAGTGTTCTCTTACTACCATTTACATATGGTACTATTGTTT
ACATATGATAATAAAGCAGATGATTAATTTTGCACGTATGGAAAGTCTTG
AGGCATTCCCTTGCTTGCAGACCTCCTGAAAAATACTCACGGTTCAGTCT
CACAAGGCTCACCGTTTTGAATGAACCTAGTCTCACAGGTGCCATTAAAA
TCACATATTTTTTGACTACCACTGGTACTGTCANACCTAGTCTCACAGGT
GCCATtaaaattacatattttttGACTACCACCGGTACTGTCACGTCtgg
tacttaagcgctcggccgcccacgctaaaaaactctaacggagtgatcca
atttagtttaatcgcaatcaaactcattgaccagacggtactaattgata
aaaaattgattaTCGAAGTATtcgataatgatcgaagtaatcgaacaacc
atttatcgattaacaatcgaatttcaagtaccgaaatttcaaaaaaattg
tgagtcttcgatcactttcttaacaacccttcggactgtccggtgtattt
gtccggtggcaaaaagtatcctttcgttacaccggacgcaataggtccgg
tgtcagtccggtgttccATACGGGGAATTTTggcatgaaacaaaaaatta
agaaacaccggacgcgccggactggtcatgtccggtgttttgattgtccg
gtggaaaaaaatatccttctccgacaccggacatacgacttccttaagtc
cggtgtagagattgtccggtggtaaaaaaaattctcattttacaccagac
tttcgcgtgtccggtgtttgttaagtccggtgcgtcggcagggtccttga
AGACTTGATAACCGttcgagtactttgattgttattgattaccgtaaatc
accgattaagcgccccgctcgaataagtgCCCcccatttagttaaaataa
ttttataagcgccccgctcgaataagcgccccccctTTGAATAAGCACCC
CCCTCTAGGGAGGGGTGCTTATTCGAATTGGTGGCCTAGGCTAATTTCCG
GGATAAGAATTTCTCTTCAAATGATTAACAGtcgaaaaaaattaacttgT
ATTGAAGAAGATGAAGACGACGACAAAgatattgttattgattgaataag
atattgtcttaaaaagaaaaaaacgattaagaataaaatgatagaaattg
tcaattggatttttctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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aataaaaaataagcgccccgcttgaataagtgccccgcttgaataagcgc
ccccctaagagcctgaaaaattaaataagcgcccgggcgcttaatcggtg
atttacTGATAACTTTGACAACTAAGATAACCAATAGATTACTTTGATAA
TTCTTTAACTAATTTAACTAATTTAAACTAATAActctttaagaaaaacc
aaaaaaactgacctaaaatcaaagcacaaaaagaagacCGGCTATAAAGA
TTGACCTCCTCATATCGCGCGTTCTGATCGGTCggagaaaacaaaagtgg
ttttcgcgcattctgattggtcggagaaaacaaaagtggttttcgcgcat
tctgattggtcagagaaaacaaaagtggttttCGAGCGTGAATCGTGTGT
TTTAATTGGCGGAAATAaacttggtttcagattattttgacgtgctgcta
ctggaaacatatttgataaaatcaatggtattcaatatgatcgaaagTTA
TCGAACAGTAAGCGAAACGATCGAACGAATCAAAAATGGTTGATAAAAAT
GCCATAATTCGGAGATgagtgagtattcgatcaccAATAGAATCGATAAG
TAGTCACTGATCACCTTCGATTCTTATTGACAATGGAATCGCAATTATTT
GATCGTGTTCAATTACGTTTGATTGGTtcaaattgcaatttttgttcaaa
gttgtttgattgacaccgtctggaagtACAGTAGCTAGATTTTATGTTTT
TCAATCTGCATGGGCAAaattcgtttttatcagtttaaaGGTCAGGGTCG
GAGCTTATAGTCAGAATATGGTTGGGAGTAGCATAGATATAGTGAAATAT
AGGGATAAAGGTCCTGGTAGGGGCTAAACCtagtcagaaaatctgccgTA
AAAACTATCTTTGCTTACTTACTTGTGTTACTTGTGTAGTTGTTTGAGCA
TCCTGCTTCAGGTAAGGTTCTCGGTGAACCACGCCTCTGTGTGATCAATC
TGTCGAGAGAAAAAGAATCTCAGCAGATATTTTTTCATGTCAATTATTGA
ATTAGAATTAGCTCTCCTGCACCCAGTATATCCATGGATCTGGGGTTCAT
CTGGGATAGACTTAAGGTGTGTGTCCAGGGCTCNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGAGACCAACTGCAT
TTGGGCTCCAAAGAACGGAGCAATATTCTAATATTGGTATCACCAATGAT
TTATATAGTACGATCATACAATTTAAAGATCGTGTTAAGAAAAAGTTCTC
AGGATCCAAGATGTTAAGTTTTTAGCCTTTTCGATTACTGCAGTAATTTG
CTTCTGAAATGTGCAATTACTGTCCATCAGGATTCCAANNNNNNNNNNNN
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NNNNNNNNNNNNNNNNACTTTCAAGAATTTCTTGTGGATCATCACTGTTA
AGTTTTACATCCCAGTCAATTTGATTCAAATCTTCCTTTAACTTATTCCA
ATCAATTTCATCTGAGAAACttcaaccaagtttatcaatcaaactttcac
catctCATAATCACAGccaaatgtattttttaaaGCATCTCACAATTTTC
CGTGGAAGTACagacttttttatatttgtGATTGGACGCTTGTGCGAATG
AGCGCCAGATCGCATTTAATACGTCTCGTCGCAAAGATTTCAGAGATTGG
TTCCTTTTGCTGTGTGAAAGCCTGCCTGGTGAGAGTAGCGTACTCACATT
ATTTGCTATCTATGATTCATGGTATGTTAATTAAATTAcgttggaggttc
ggtgaaatggtgacCGAATgaccgtcccatgttttgttagATAGTCACAA
GTAAGAGCAGTTGAGCATACTTTTCCCCCCATAAGAATtattaaaggcaa
aaagtagttaAGCTCTAGCTTCTAGACTACAGCAGGACTAACCCTGACAG
TTAAGAAATGAATGATTGTGAATTCGAATTTGAGGATATATACTTTTCAT
GTGAGGGTTTGATACTTGGGATAAGTATCAAACTTGAACTCTAAAAATGA
CAACCTCAAAACATCTTAAAAGTTCAGAAATTCTAGAAACTAAAAACAAA
CAGCTACTAGGTAAAACATTTATATAACACTGTCTCAGCCACCCTGGAGA
AAAAGGGGCAGCAAAAAGATCTTCTACAGATAATTTACGACCAAATGCAG
TGGCGTAATAGGCCTGACTTAAAATGGGCCAGAAAGGTAATTGCCCATAT
TCCTTTCATTCTTTTAGTACGGGGCTATTTTAAAAAGCATGGTACCGATT
TAATTTACTGACCAGGATTAAATCGTGtgtaaaagaataacatacgCTTT
TAGAAATAAATGTAGAGTGATATAATAATAACATATAATACAAATAATAT
AATATGTGTTTATAACATAAGATGATTATGCTTGTTTGCTTTAAACAAGT
GTTTGAGAGAATCAAAGACTACTTCCTAATGTCAATTCATATCCAattat
atttcctgcatcatATTGAGTATAAATGTAATTCTTAACAAAGTAACCTT
AGAACTATTGTATTTTATGATgtcgtcaaaatttttggtagAAAGTGTCA
GTTTAgtgataaaaatgacaaaagaaaatgtcaTTGCTTTCCTTGCTCTA
AAAGCTATCTTTACAAATTTTCCAAGGCTAAAATGACTGTTGATTTGTAT
CCTTTTGTACAATGAGCATCACCTTcagtataataaatatttttggagGA
ATTTGACTTATGAttattatttcaatattttgtaaatatttttacaagaa
agtgcctttttttgtcaGAATTCTGACATGTAAAAAGAGGAGATATTTAA
ATAAGATGTTACTAGCCAGCACCTTACAATTCTTCTGATTTTAAGCTATA
ATATGATGTTGGTTACTTGATTGGAATACTGTTTTGTTTGGTTACTGAAT
TTATTCTGGTCTTacttattctggtctgtaaatttttgaAGTAGGAAAGG
AAAAAAGCAAGATGGCGGCTGATTTAATAAAAAGCAATCGATTTTCACTA
CCTGTCGAAGAACGGCAACTGTGACAAAAGTTTTATGATAATCTTAAATC
TAACTTTATCAAACCATCAATGAAAGGTTTTAGTACCATATTATAATGAA
ATTAAGTCTCATTTAACAAAATTAAGGGCAGAAAGTGGTACCCCAATAAG
TGCACCAATTGGGGTACcatgctttttaaaataaccCTTTAGTACGCATC
CTTGCAGAAACCACCccagtttttatatttttaaatgagTGTGACCACCT
CCTTTCAGTAAAAAACGAAGGGAAAGTAAATTATGTCAaccaaattttta
gaaaaaaactaatttgaatTCTATTTATTTTGATTAATTAAATTTGTTAG
CTCATGTTAGCATCATCTCTATTTGAAAGAGAAAGTACTTctaattgaaa
aaattatattaaGAAATAAATAATGTGAAATTCTTTCATTACACCTTTTC
ATTGTCTTATTTGCTCAAACAAAGAGCTCAAAAGAGCGCCGATGACACCT
TTCTATGAGCACATATTTTATACTGTGTCAATCTATATAAGAATGTCTCA
ATTCACCTCAATTCAAATAGGAATACGTTTTacaatttgataaaagtttg
cATTAGAAACGTTAGtgaattttatgaagaaaacaaaaaaagctaaacgA
AAGTTGTGGCTAAGAGACAGGGATGCAGAAGTTCAGTTTCATCAATATCT
TGAATCATGATTAGAAGCATTAGTGGTCCCAGCAAGTGTATCCATTCTCT
AGGTAATGGGTCAGTCGTTCAGTGTGTTGGAGCAATTAACTAAGATATGA
TCGGCCTTTCCTAAAGCGATGTTGATTATTGTTATACAGATTGTTTTCTT
CTAAACGGTTCTGTTTCTTGGTTCAAACAATCTTTTCAAAGATCTTTGAT
ATATGTGATGTTTGGATAGTCTATAGTTTTCTGCGAGTCCTTGATTCCCT
TTCTTGTAGACTTGGGAAGTAAAAATATATCTGACGTAATGGTAGATTAc
tattaaaaaaatactattaaAGAAATTCCTTTATGATCTTCtaaaaaatc
gagaaatttaaaaatttcttaatttttctttttactttcagTCTGAAACA
GAAGTTGGGCGTCTGCAAAAAGAATTGGGAAATTTAGAAGACGAATTAGA
CACATCTGAAACTAAATTGGCAAAGATCACTGCAAGGTTACATGAGGCAG
AAAAACAGGCAGATGAAAGTGAGCGTGCTCGACGTGTTTTGGAAGACCGT
GGTCAAACAGACGATGACAGGTTAGCTAAACTACAAGCAGAATACGAAGA
TGTTGTCTCCAAAAATGCAGATGTGGAAGATCGATACTCACAGGTATANC
GATGACAGGTTAGCTAAATTACAAGCAGAATACGAAGATGTTGTCTCCAA
AAATGCAGATGTGGAAGATCGATACTCACAGGTATATTTTGTGTAGCATT
CTTGAAGCTCTTAAAATATGCTGGAATCTGACCCCTGTTTGTTACTAATA
ATAGCAGGCAAGCACTAAGGTCAAATTATAAATTTCTGCTGTTTCCAACA
GGAAAAATGACTTAAAATCTTTTAACAGTTTCTTTATTCATCACATCAAT
GGCttcataaatatttttcaattgatAATAATATAAATTTGTCATTCCAA
CTGCTTACTTTGACcgaatttcttttaatttttagatttcttcgGAAATT
GAAGATTTAGAACGACATCTCGAAGATGAAGAACAAAAAGCTGTCCAAGC
AGAAGAGTaagtcaaatttttcttttatttttgttcgcATAGNTGAAGAA
CAAAAAGCCGTCCAAGCAGAAGAGTaagtcaaatttttcttttatttttg
ttcgcATAGGCTATTGCATATTTTTTAGCGATTGCAATTTTTGGACACAT
CACTATCTCTTCAAGATGATAATTTTTCTGTCACTAACTTCCTTAGTACT
TAGGTATGAAATTGttgaattattttatttcaaagtttaaCGTTAATTTT
TTCCGAGattatttgataaagtttattAAAGTACATATTCACTTATGCCT
GTAACCAAGGCAGATACACACACTCTGTCCTTTACACGTTCTCTAAGAGC
TTTGTTCCCTAACATTTGGATAGAAACGCAATTtcactataaaaaaacat
tatgCATACACATTTTCATACTTTGCAATACCTACATATATATACGAAAT
CcattaaaaaaactttagtTATGATCAAGAGGGCAGGTTGTTTCTGCTTT
AGCATGAAGCACATACTACTAACCTCAATAGAAAAtattattatcattat
cattatcAAACTACAGTACACTACATCTCTACAATGAATCttttaaagat
tgaaaaagAAACTTAACCTCGAAAGGCACACCTACATACATACCCgagtt
ttatttctttttattctcAACCTAACCTATGGTGTTCAGAACACAAACAC
ACATACACACCCATAgatggaaaaaatctcaaatgggTACAAGTCCATTT
TATTTCTTTGTATTCTCAACTTAACTAtggagtgaaaaaaaaacacaaac
acaCATACACGTACAtacaacgaaaaaaaaataatctaaaattgATCCAA
GTCTATTTTATTTCGTTTTATCCTCAACCTAACCTCCGATGAGCAGACGT
GTAAAACACTTGGATAATGAAGTAGTGGTTGTAGGAAACAGTCTAAAGGC
TATGGAAATAAGCGAAAACCAGGCCAGTGCTAGAGAAAACCAATACACTA
CTAAACTCCAAGAAATGAGCACACGGTATCAAGAGGTAAGGGCGCGTTAG
AAGGGCGTTTCATTAGGCGCGAGGGTGTGAAAATCATTTAGGGTGGTTTT
TAGGATGGATTAAAAATGATCTCAAATTTTGGTGTCGTAATCGTCAATCC
TTGTGGAATACACGAATTTCCTATTTTacagattcatgtaaaaaagtcac
gaaaaaacgtcgacTGGAGCGTCAACTAAGATTTTTTTATAGCGGCTGTT
GTGGGCTGTTACCTTTCGTGAAATTATTTCCCTTGAAAAGTTTGGTTACT
GTGAACCAGTGTGAACACCACTTTGTTGGGATCATTTTTAATCAATATCA
taggttggtctaatgtcgacacccctcttctaattttgacacccttcttt
agagatgggAATAACGGGAAGgaagaggggtgtcgacattagaccaactt
acggtacacaGCAGAATGGGGTGGTTTCCTGCTTTCCCTTGTTTCATGAT
ATAATATGACTTTGGGTGAAACCTCAGATTACTTTTGGATCACTTTTTAT
CGccgtttctttacttccaaatatctatatttcaaaaaagaaatatttga
taGTCTTTCGTTAAAGTCCTCAGGTTGAGGTGATCCGAGTAAAATTCGAG
TTACTTACTCAAAGTCATATTGTGTTCATGATTTATTATCCCCATAAGCC
AATTTCATTCATTTATATACATATACACTTCTTTATCTAATCAATACACC
GTTCTCTCAACACCCTCCCGCCCATCCGCCCAAACAGAATGTCGAAAACA
TTGGATAAAACGTTAACGGAGGTTGGCAACTCCTTACGTTTGATGGAACG
TAACGACAAAGACGCGTCAGAGCGGGAAGATAAGTTGTCATCAAAACTTG
CAGCTATGAAGCAAACATACACGGAGGTAATGTAACCCCTCCCTAGCCCT
AAAACCCCCTATCTCTGTCATCGGGTTTTAGTCTAAATTCTTCTCTgctg
tttttttatttaccaATACCATCTGTCTTctattttgatcaatttttatt
tcttttgtttgccCAAAACTTTTTATATGACACGATCTTATCtacactga
aaatgaaaaactaaagATTTTACGTCAAAAGTCTAAGGCTTGTGGTTTTT
GCAAATCAAGGATATAAACCTATCAACCTTTAAAGCGTGAGGAGACTAAG
TTCGAGTTTACCAGGAAGAAATGACTTCAAAATGTCTAAAGCCATGCATT
CACATTCTCATTATAAACAAACATTTTGACATCATTTCCTTGTAAGTTCT
ATCATTACCAGACCCCTCAAAGGCTTACCATACccaaagatttataaagc
ccgaagggctcgatgtcgtgctttaagccatcgcaggcaaaacaaattat
attgttgttattgtttccgaaaacccgcgaagcttctgattggtcaagcg
ctgaaattctattgtaatgtcacgtgacctaggtaggatctcctacctaa
cctcgacacacttttcagcaaaagtttgatatctagcccttcgggcttta
taaatctgacCACACCGTCAGGTTTGATAGGTACATTTTAATCACGCGAG
ATTGTTGTTTCAGGCTTATAAGTTAACCCTTTTAATTTCTGGATACTTTT
TGTTTAATTTCTCTACTTTGATCTCAATTCAGGCTGAGTCACGTGCTTCT
AAATACGAAGATCACTCAAAAGAATTGGAATCCACCCTCGATGATTTACA
AGGTAAGTCTATAACgatttttcaacgtttatctcaCGTTTTATTGGAAC
TGAAATATGACTTTGACCCAAAAAGTACGTAATATACATAAgctctctct
tattcgaacttctattattcttTTTATAATTCTAACTAGTTTCCAGTCCT
CGTCAAGGATGAAACCCTTTGAAANACTTCTATTATTCTTTTTATAATTC
TAACTAGTTTCCAGTCCTCGTCAAGGACGAAACCCTTTGAAAATATTCTC
TATATTTCGAGTCTCTGTAATTCGAGCAAATGAGTTTCCCTgttcgaatt
agtgagagtcaactgtattgtCAGACAATATTattgacaaaacaaaaaat
atattgtGAAGTGCTCAGAATGTATTGAAAAGGTGTTCACTATTATATTC
CAACAAAATAGGGGGAAataagtaaaacaaaaaaatgaagcgactgctta
gATTGAAATGAGCTGCTCCATTAAAAATccgtacagggggggggggatag
acgaacctttttaagtcacaataaaattcttggaaatgtgaggataaccc
ctggaaattggcaaaattttcaaagaaaatcttGGAAATATTTTAAAGAA
TACTTAAGTTACGGTTGACGAACTAAACCTGTCTTTTACCTCcttgaaat
tttagaataactatttaccccctgataaatgaaaaaaacactcatTTAGA
CCCTCTGGAAATTCTTTTCATGGTTACCCCCGGGAAATGTTcgccccccc
ctgtatggagataaaatggaatggcccaatgccCGTCATATTTTATATAG
GATATGGTGTCatgggggtagtgaaaaatctacaaaatttgccatgtccg
gggggtaaacttgctctgtttgggggtaattttgcttggtttatgggtta
ttttgaatgtctcggggtcaactgatgcttgtccggcgggtcagacctgc
tgtccgggggtcaaaattcacaatgtccgggggtcaaaattcacaatgtc
cgggggtaaatttataaaaaaagttatatcctccacccccatattcaatt
ttttttctggaagagcccaatttggTGAAGATATTGTTCTTACCAGACTG
GGAATGTTTTAGTTTTGGTTAGAAGTAATTTTGGCGAATCACAGGGTAAA
TTTGTTTTTAGACAAATTGctttttcaaacaaagattattttagagaatc
ataaaaaactttatttttgcgAGGAACATTGTTCTCGTTTTTTTCGTAGC
GGCTTTCGGCTTAgttttctgtaaaatatttttttctaaaatgacaggta
cgacctttttttaaacacaAAAACGAACGATTTTCAATATATGACAAGGT
AAAATGACTACTTAATTATTTCCTGTCTGTAATTTGAGCGAGATCAATCT
CTCCTCCCAGttgaaaaactatttttcaaaagtcaattaTGACCAGCTAT
GACTGATTTCTAGCACTACAAGAAGCTCTTGAAAAAAGAGcaagttaaaa
ttttgtttttaaaaatataagaGTAATAtcttttgcttactcatcaattt
taattcacaagctttttcacatttgattgacacggacgtggagcaagatt
ggtcagaaaaaggaaaggaaaattttttttgcttatatcagcctaatata
acaatagccagacactgtcctgatatgaaatattatgtgtctgatatgaa
acggaaacacttatgtaaaaataaaacctttaaactttATTTGGACCCCa
cctttgatttgtttttgaaaatagtttcaaaggtcaaaagaaaaatactt
tcttttttgcTAAGCCTAAATTTTTGATTTAGTCCATATTtactttattt
cattttatttccaacccctggaaattaggccccttttattaaaattagaa
aatattttcaaagcaagTTTATTAAACACCCGAGAGTTACTTGCTGTCTG
GTTTATGGCTTCTTCTGTAAATTTGTCTCAtaactcaaatttttttctct
taagtTTAGACAAGAGTGACTGTTTATTTGTTTTGACTAGGCCTGTTCAA
TAGTGTTTTATGGTTTTCATAACTAAGTTTTCTTCTACTGTTATATGTTG
GTCCTCGATTTTAAGTTTGTTTAAGGTTTAAAGAGGAtttcgaaattatt
tttctatgGCCTTGTTTGGAGTTTCGAGGACCTACTTTTGTATGTAACAA
AAATCTAAACTCAACCATCATTCTTTGTCAAGTTTCATCGGGCTtcctca
aattttaaatttaggtTAATTGCAGAACCCTAAAACTctaaatttattaa
tttttgacaGAGTCTAGTGGAGCCAATAAAGGTCAAACTGTTAAGGTTAT
GAGCAGTCTACCATAGTTGATGTCATCAAAAGAAAAGCTTTTCAGTTTGC
TCTCAAATAGGCTGCCTAGTTTACATGGTGATTAATGTATGTTGGAAGGG
CTTCATCTGTCTTTTACAGCTCTTAAGCTCTAGGTGCGTGTTTATATAAA
TTggcgaacaatattcgacaagaTGTTTGCGGACCATAATTCATGAAGTA
AATAATAGGCGGTTCTCtgttataaaaaggaattttctttctgaaaGCAC
CCCCCCTATTTTATTTGGGgcaattgggccattccattttctAACGATAC
AGGGAAtggacgaacttttccaggggctAATCTGAAgcaaaaactttctt
taatttttcagggggtaaaaaaatattctaaaactTTCAGGGGGTTAAAG
ACTGGTTTTAGTTGATCACCCTTACTTTTAAGGTATGAAGAAAACATTTC
CAAAGGTCTTGcatattttgccattttccagggggagggtcaagaattat
tttttttcttaaagagGTGCATTCACCCCCTGTATTGATTTAAAGTGGAA
CAGCCCATCGTGGTCAATATATTGTATATTGTAACCCTTTAGTTCTACAA
ATCTTGTGATTTTCCAAATGTTTTCGATATGGAGAGCTATGAGAGAATAT
TTGGCCTATAGACAAAAGtataagaacattgtaagaagaTTTATAACAac
attttcttaggaaattacaccaaaataaatacaaaatgatgaaaataaga
acaatggatattttagaattcttttaaaaaggTCTTAGAACTTTCCTTCT
CAAAAGGTTGTACTacacgtctttttataagagcaaattatatataagaa
cataagacttcgattgccaaaatgttaagaacaggCTAAGtgtattttaa
ggctttgcagactctaaatggccaatttcttaagaaaattgacCAAAGTG
CTCacgaaatggtgaaaataagaatatatgctaagaacatttttaggctt
gaagctaaaaaagttaagaacatccgaaggcttcaaaaatttaggatgtt
cttatttaaaatAAAACGTGTAATGTTGACGAGAAAGAATGTATAGTCTA
TCACTCATAACCATGTCTGTGGAGAAAGTAACACGtcgttttgacatttt
ctttcaatcAACTTAATCAATTTAAGCTTtacagtgaaaaaaaaatctca
atatagTCTTAGATCTGATTTAATATTGAcaaattttatcaaagaaaagt
tgaaatttttttaataatgtaGCATATATATGATTAACTGTAACATGTTA
AAATGCTACATAATCTTAAAAATTTAGTATATATACTGCATTCTTATGAA
CCCCCTCTATgggaatttgttttttaaaattgCTTTCCATCTATTGCTCT
CAGTTTTCCATGAAGATCAGAATGTACAGGAATATAAACCTTCAAATTAC
CGACTTTATTTGTAGTTGATCAATAAACGCCCTCTCCCACTTTTATCTAT
TTCTTTTGGAGAACTTTATGGATCCCTATTTCTACTAGGGCCCATCGATT
CGGGCTACGATGAGAATTGAACTGTTGATTAATCATTATGCACCTTTTTA
TATTAAAACTGGAAACTTTTGGCTGAGGTTCggctgtttttgtttttccg
aTTAAGATTTTAAATGCTCTTAAATTGTTCCTCGTTTATAAAAAAGGGGG
TAGCAACTGCGATTATAAACTCATCCGTACGGTCATTGTTGAAAAAAGTG
TCTCATTTTTTGTCTATGTAAAGTGACTCGTCAATAGTAATTGAGATTAA
AAACTGATGTCACTCTTTTACTAAAAAATAACCtacctctttaaaaaaat
tgctttgaatgATTTAATCTACTTTTAGGATGAGTGACAAGTCTGTTATT
ACGTCACCATCTATATATCTAAACTGCTACCACTCCGGTAGTCAAAGGCT
ATTTTTATGTTTCACTTGCTTTAAGTCGAAGACGatccgaaggctcctct
ttcggtAGCTGTCTACCGGACGTAGCGTCACTCTTTTCCCCTAATTTGTC
TGACTTACCTAGGACCCCTTCTCTTGTTGCTGAACCGGAGAAGTGTCAAG
TAACATTTTTTGCTAAGTATAAAGTCTTTGGCATGACCCGACCTCGCTTC
GAACCCAAGACTTTGCACTTCGCAACCGAGTACTTTACCTTTTCACTAAG
AAATAAGGGGAGAGACTTAGCTGTATTATAAGTCTCCAGCCAAAGTGTCC
CAGGCGGGATTTCTATACCCACGACACTGATTTCGCCATAACACTGGCGG
CGTGCGTATTCATTTAATTCATATAAATCCTTTTCTTTTTACAGATAAAT
TGGAGGAGGAAAGGAACCTATACGATAAAGTCAAAGGTGATCTCGACAAT
CTCCTGGCTGAGATCCAAAACTTGAATGTCTAAATGAACTATTAACTATT
GAATGACCACTGATTTCACAAATAAACAAAAGACCCAACATTTCAACAAT
GTAATTATCATTTTATTATGCATATTTTAAATTGTATGGTTTTAGTTACT
CTTTTAGTTGCTCTTATTGCTgctgttttgttgttgtttacaTGTTTGAA
TTTCATCTTTAGATTAGACCTCTCATAAAATAAACGTCATGAATACTTAC
CTCATTTGAAATAATGATGCAGCTGTCAaccatttaaaggttttgttttt
aagtaagagtgatatcgtttgcttactcatcaattttaattcacaagctt
tttcacattgaattgacacgaatgtggagcaagatcggtcagaaagagga
aaagaaaaacattttttgcttatatcagcataatataacaatagtaagac
actgtcctgaaatgaaatatgtgtctgatatgaaacgggaaaaaATGCAC
CTGATGCTTATAACATCCAAACAGTTTAGCATAATATCGCACTGCCTGGA
CCTCTCTAAACTAATTTTTTATTGCTAAGTTCAAaaatgttgtatttttt
actgtagTTGTTTTTATGAGCATTGTATCTATGTATTTTACTGTTTATGA
CCCCCTTAAATAAATTTAGCATCTTTTTTGTGAATGTATATATTccttat
ttgtttttttttctaaaaaatacttcaaataaTATTTATAAGA

Coding sequence (CDS) from alignment at scaffold_384:89286..108678+

>TCONS_00063191 ID=TCONS_00063191|Name=TCONS_00063191|organism=Clytia hemisphaerica|type=CDS|length=5145bp|location=Sequence derived from alignment at scaffold_384:89286..108678+ (Clytia hemisphaerica)
ATGGagcaaattaaaaagaaaatggcaATACTTAGAGAGAAGCTTGAAAA
GGCTGAGGAACGTTCCAAAAAAGCTGAAGACGAACTACAAAACTCAAACA
ACAAAGCTGAAGAGTCTGAAACAGAAGTTGGGCGTCTGCAAAAAGAATTG
GGAAATTTAGAAGACGAATTAGACACATCTGAAACTAAATTGGCAAAGAT
CACTGCAAGGTTACATGAGGCAGAAAAACAGGCAGATGAAAGTGAGCGTG
CTCGACGTGTTTTGGAAGACCGTGGTCAAACAGACGATGACAGGTTAGCT
AAACTACAAGCAGAATACGAAGATGTTGTCTCCAAAAATGCAGATGTGGA
AGATCGATACTCACAGatttcttcgGAAATTGAAGATTTAGAACGACATC
TCGAAGATGAAGAACAAAAAGCTGTCCAAGCAGAAGAACGTGTAAAACAC
TTGGATAATGAAGTAGTGGTTGTAGGAAACAGTCTAAAGGCTATGGAAAT
AAGCGAAAACCAGGCCAGTGCTAGAGAAAACCAATACACTACTAAACTCC
AAGAAATGAGCACACGGTATCAAGAGGCTGAGTCACGTGCTTCTAAATAC
GAAGATCACTCAAAAGAATTGGAATCCACCCTCGATGATTTACAAGATAA
ATTGGAGGAGGAAAGGAACCTATACGATAAAGTCAAAGGTGATCTCGACA
ATCTCCTGGCTGAGATCCAAAACTTGAATGTCTAAATGGagcaaattaaa
aagaaaatggcaATACTTAGAGAGAAGCTTGAAAAGGCTGAGGAACGTTC
CAAAAAAGCTGAAGACGAACTACAAAACTCAAACAACAAAGCTGAAGAGT
CTGAAACAGAAGTTGGGCGTCTGCAAAAAGAATTGGGAAATTTAGAAGAC
GAATTAGACACATCTGAAACTAAATTGGCAAAGATCACTGCAAGGTTACA
TGAGGCAGAAAAACAGGCAGATGAAAGTGAGCGTGCTCGACGTGTTTTGG
AAGACCGTGGTCAAACAGACGATGACAGGTTAGCTAAACTACAAGCAGAA
TACGAAGATGTTGTCTCCAAAAATGCAGATGTGGAAGATCGATACTCACA
GatttcttcgGAAATTGAAGATTTAGAACGACATCTCGAAGATGAAGAAC
AAAAAGCTGTCCAAGCAGAAGAACGTGTAAAACACTTGGATAATGAAGTA
GTGGTTGTAGGAAACAGTCTAAAGGCTATGGAAATAAGCGAAAACCAGGC
CAGTGCTAGAGAAAACCAATACACTACTAAACTCCAAGAAATGAGCACAC
GGTATCAAGAGGCTGAGTCACGTGCTTCTAAATACGAAGATCACTCAAAA
GAATTGGAATCCACCCTCGATGATTTACAAGATAAATTGGAGGAGGAAAG
GAACCTATACGATAAAGTCAAAGGTGATCTCGACAATCTCCTGGCTGAGA
TCCAAAACTTGAATGTCTAAATGGagcaaattaaaaagaaaatggcaATA
CTTAGAGAGAAGCTTGAAAAGGCTGAGGAACGTTCCAAAAAAGCTGAAGA
CGAACTACAAAACTCAAACAACAAAGCTGAAGAGTCTGAAACAGAAGTTG
GGCGTCTGCAAAAAGAATTGGGAAATTTAGAAGACGAATTAGACACATCT
GAAACTAAATTGGCAAAGATCACTGCAAGGTTACATGAGGCAGAAAAACA
GGCAGATGAAAGTGAGCGTGCTCGACGTGTTTTGGAAGACCGTGGTCAAA
CAGACGATGACAGGTTAGCTAAACTACAAGCAGAATACGAAGATGTTGTC
TCCAAAAATGCAGATGTGGAAGATCGATACTCACAGatttcttcgGAAAT
TGAAGATTTAGAACGACATCTCGAAGATGAAGAACAAAAAGCTGTCCAAG
CAGAAGAACGTGTAAAACACTTGGATAATGAAGTAGTGGTTGTAGGAAAC
AGTCTAAAGGCTATGGAAATAAGCGAAAACCAGGCCAGTGCTAGAGAAAA
CCAATACACTACTAAACTCCAAGAAATGAGCACACGGTATCAAGAGGCTG
AGTCACGTGCTTCTAAATACGAAGATCACTCAAAAGAATTGGAATCCACC
CTCGATGATTTACAAGATAAATTGGAGGAGGAAAGGAACCTATACGATAA
AGTCAAAGGTGATCTCGACAATCTCCTGGCTGAGATCCAAAACTTGAATG
TCTAAATGGagcaaattaaaaagaaaatggcaATACTTAGAGAGAAGCTT
GAAAAGGCTGAGGAACGTTCCAAAAAAGCTGAAGACGAACTACAAAACTC
AAACAACAAAGCTGAAGAGTCTGAAACAGAAGTTGGGCGTCTGCAAAAAG
AATTGGGAAATTTAGAAGACGAATTAGACACATCTGAAACTAAATTGGCA
AAGATCACTGCAAGGTTACATGAGGCAGAAAAACAGGCAGATGAAAGTGA
GCGTGCTCGACGTGTTTTGGAAGACCGTGGTCAAACAGACGATGACAGGT
TAGCTAAACTACAAGCAGAATACGAAGATGTTGTCTCCAAAAATGCAGAT
GTGGAAGATCGATACTCACAGatttcttcgGAAATTGAAGATTTAGAACG
ACATCTCGAAGATGAAGAACAAAAAGCTGTCCAAGCAGAAGAACGTGTAA
AACACTTGGATAATGAAGTAGTGGTTGTAGGAAACAGTCTAAAGGCTATG
GAAATAAGCGAAAACCAGGCCAGTGCTAGAGAAAACCAATACACTACTAA
ACTCCAAGAAATGAGCACACGGTATCAAGAGGCTGAGTCACGTGCTTCTA
AATACGAAGATCACTCAAAAGAATTGGAATCCACCCTCGATGATTTACAA
GATAAATTGGAGGAGGAAAGGAACCTATACGATAAAGTCAAAGGTGATCT
CGACAATCTCCTGGCTGAGATCCAAAACTTGAATGTCTAAATGGagcaaa
ttaaaaagaaaatggcaATACTTAGAGAGAAGCTTGAAAAGGCTGAGGAA
CGTTCCAAAAAAGCTGAAGACGAACTACAAAACTCAAACAACAAAGCTGA
AGAGTCTGAAACAGAAGTTGGGCGTCTGCAAAAAGAATTGGGAAATTTAG
AAGACGAATTAGACACATCTGAAACTAAATTGGCAAAGATCACTGCAAGG
TTACATGAGGCAGAAAAACAGGCAGATGAAAGTGAGCGTGCTCGACGTGT
TTTGGAAGACCGTGGTCAAACAGACGATGACAGGTTAGCTAAACTACAAG
CAGAATACGAAGATGTTGTCTCCAAAAATGCAGATGTGGAAGATCGATAC
TCACAGatttcttcgGAAATTGAAGATTTAGAACGACATCTCGAAGATGA
AGAACAAAAAGCTGTCCAAGCAGAAGAACGTGTAAAACACTTGGATAATG
AAGTAGTGGTTGTAGGAAACAGTCTAAAGGCTATGGAAATAAGCGAAAAC
CAGGCCAGTGCTAGAGAAAACCAATACACTACTAAACTCCAAGAAATGAG
CACACGGTATCAAGAGGCTGAGTCACGTGCTTCTAAATACGAAGATCACT
CAAAAGAATTGGAATCCACCCTCGATGATTTACAAGATAAATTGGAGGAG
GAAAGGAACCTATACGATAAAGTCAAAGGTGATCTCGACAATCTCCTGGC
TGAGATCCAAAACTTGAATGTCTAAATGGagcaaattaaaaagaaaatgg
caATACTTAGAGAGAAGCTTGAAAAGGCTGAGGAACGTTCCAAAAAAGCT
GAAGACGAACTACAAAACTCAAACAACAAAGCTGAAGAGTCTGAAACAGA
AGTTGGGCGTCTGCAAAAAGAATTGGGAAATTTAGAAGACGAATTAGACA
CATCTGAAACTAAATTGGCAAAGATCACTGCAAGGTTACATGAGGCAGAA
AAACAGGCAGATGAAAGTGAGCGTGCTCGACGTGTTTTGGAAGACCGTGG
TCAAACAGACGATGACAGGTTAGCTAAACTACAAGCAGAATACGAAGATG
TTGTCTCCAAAAATGCAGATGTGGAAGATCGATACTCACAGatttcttcg
GAAATTGAAGATTTAGAACGACATCTCGAAGATGAAGAACAAAAAGCTGT
CCAAGCAGAAGAACGTGTAAAACACTTGGATAATGAAGTAGTGGTTGTAG
GAAACAGTCTAAAGGCTATGGAAATAAGCGAAAACCAGGCCAGTGCTAGA
GAAAACCAATACACTACTAAACTCCAAGAAATGAGCACACGGTATCAAGA
GGCTGAGTCACGTGCTTCTAAATACGAAGATCACTCAAAAGAATTGGAAT
CCACCCTCGATGATTTACAAGATAAATTGGAGGAGGAAAGGAACCTATAC
GATAAAGTCAAAGGTGATCTCGACAATCTCCTGGCTGAGATCCAAAACTT
GAATGTCTAAATGGagcaaattaaaaagaaaatggcaATACTTAGAGAGA
AGCTTGAAAAGGCTGAGGAACGTTCCAAAAAAGCTGAAGACGAACTACAA
AACTCAAACAACAAAGCTGAAGAGTCTGAAACAGAAGTTGGGCGTCTGCA
AAAAGAATTGGGAAATTTAGAAGACGAATTAGACACATCTGAAACTAAAT
TGGCAAAGATCACTGCAAGGTTACATGAGGCAGAAAAACAGGCAGATGAA
AGTGAGCGTGCTCGACGTGTTTTGGAAGACCGTGGTCAAACAGACGATGA
CAGGTTAGCTAAACTACAAGCAGAATACGAAGATGTTGTCTCCAAAAATG
CAGATGTGGAAGATCGATACTCACAGatttcttcgGAAATTGAAGATTTA
GAACGACATCTCGAAGATGAAGAACAAAAAGCTGTCCAAGCAGAAGAACG
TGTAAAACACTTGGATAATGAAGTAGTGGTTGTAGGAAACAGTCTAAAGG
CTATGGAAATAAGCGAAAACCAGGCCAGTGCTAGAGAAAACCAATACACT
ACTAAACTCCAAGAAATGAGCACACGGTATCAAGAGGCTGAGTCACGTGC
TTCTAAATACGAAGATCACTCAAAAGAATTGGAATCCACCCTCGATGATT
TACAAGATAAATTGGAGGAGGAAAGGAACCTATACGATAAAGTCAAAGGT
GATCTCGACAATCTCCTGGCTGAGATCCAAAACTTGAATGTCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039594XLOC_039594Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063191-proteinTCONS_00063191-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063191-exon-scaffold_384-1491911889:89286..89555TCONS_00063191-exon-scaffold_384-1491911889:89286..89555Clytia hemisphaericaexon
TCONS_00063191-exon-scaffold_384-1510915933:89286..89555TCONS_00063191-exon-scaffold_384-1510915933:89286..89555Clytia hemisphaericaexon
TCONS_00063191-exon-scaffold_384-1575043694:89286..89555TCONS_00063191-exon-scaffold_384-1575043694:89286..89555Clytia hemisphaericaexon
TCONS_00063191-exon-scaffold_384-1491911889:99777..100007TCONS_00063191-exon-scaffold_384-1491911889:99777..100007Clytia hemisphaericaexon
TCONS_00063191-exon-scaffold_384-1510915933:99777..100007TCONS_00063191-exon-scaffold_384-1510915933:99777..100007Clytia hemisphaericaexon
TCONS_00063191-exon-scaffold_384-1575043694:99777..100007TCONS_00063191-exon-scaffold_384-1575043694:99777..100007Clytia hemisphaericaexon
TCONS_00063191-exon-scaffold_384-1491911889:100096..100116TCONS_00063191-exon-scaffold_384-1491911889:100096..100116Clytia hemisphaericaexon
TCONS_00063191-exon-scaffold_384-1510915933:100096..100116TCONS_00063191-exon-scaffold_384-1510915933:100096..100116Clytia hemisphaericaexon
TCONS_00063191-exon-scaffold_384-1575043694:100096..100116TCONS_00063191-exon-scaffold_384-1575043694:100096..100116Clytia hemisphaericaexon
TCONS_00063191-exon-scaffold_384-1491911889:100371..100441TCONS_00063191-exon-scaffold_384-1491911889:100371..100441Clytia hemisphaericaexon
TCONS_00063191-exon-scaffold_384-1510915933:100371..100441TCONS_00063191-exon-scaffold_384-1510915933:100371..100441Clytia hemisphaericaexon
TCONS_00063191-exon-scaffold_384-1575043694:100371..100441TCONS_00063191-exon-scaffold_384-1575043694:100371..100441Clytia hemisphaericaexon
TCONS_00063191-exon-scaffold_384-1491911889:101332..101470TCONS_00063191-exon-scaffold_384-1491911889:101332..101470Clytia hemisphaericaexon
TCONS_00063191-exon-scaffold_384-1510915933:101332..101470TCONS_00063191-exon-scaffold_384-1510915933:101332..101470Clytia hemisphaericaexon
TCONS_00063191-exon-scaffold_384-1575043694:101332..101470TCONS_00063191-exon-scaffold_384-1575043694:101332..101470Clytia hemisphaericaexon
TCONS_00063191-exon-scaffold_384-1491911889:103118..103187TCONS_00063191-exon-scaffold_384-1491911889:103118..103187Clytia hemisphaericaexon
TCONS_00063191-exon-scaffold_384-1510915933:103118..103187TCONS_00063191-exon-scaffold_384-1510915933:103118..103187Clytia hemisphaericaexon
TCONS_00063191-exon-scaffold_384-1575043694:103118..103187TCONS_00063191-exon-scaffold_384-1575043694:103118..103187Clytia hemisphaericaexon
TCONS_00063191-exon-scaffold_384-1491911889:107880..108678TCONS_00063191-exon-scaffold_384-1491911889:107880..108678Clytia hemisphaericaexon
TCONS_00063191-exon-scaffold_384-1510915933:107880..108678TCONS_00063191-exon-scaffold_384-1510915933:107880..108678Clytia hemisphaericaexon
TCONS_00063191-exon-scaffold_384-1575043694:107880..108678TCONS_00063191-exon-scaffold_384-1575043694:107880..108678Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_384supercontigscaffold_384:89286..108678 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.30218	1.40795	4.8616	9.25563	0	0	0	0	0	0	0	0	0	0	0	0	7.16898	10.4192	0	0	38.4887	32.5129	4.83702	8.82462	32.2344	30.4952	4.97552	11.3244	9.41172	8.05914
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000533Tropomyosin
Blast
[Close]
BLAST of TCONS_00063191 vs. Swiss-Prot (Human)
Match: TPM1 (Tropomyosin alpha-1 chain OS=Homo sapiens GN=TPM1 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 9.952e-22
Identity = 71/233 (30.47%), Postives = 141/233 (60.52%), Query Frame = 1 
Query:  166 IKKKMAILREKLEKAEERSKKAEDELQNSNNKAEESETEVGRLQKELGNLEDELDTSETKLAKITARLHEAEKQADESERARRVLEDRGQTDDDRLAKLQAEYEDVVSKNADVEDRYSQISSEIEDLERHLEDEEQKAVQAEERVKHLDNEVVVVGNSLKAMEISENQASARENQYTTKLQEMSTRYQEAESRASKYEDHSKELESTLDDLQDKLEEERNLYDKVKGDLDNLL 864
            ++KK+    ++L+K  E  K A+++L+ +  KA ++E +V  L + +  +E+ELD ++ +LA    +L EAEK ADESER  +V+E R Q D++++   + + ++      D + +Y +++ ++  +E  LE  E++A  +E +   L+ E+  V N+LK++E    + S +E++Y  +++ +S + +EAE+RA   E    +LE ++DDL+D+L  ++  Y  +  +LD+ L
Sbjct:   46 LQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHAL 278
The following BLAST results are available for this feature:
BLAST of TCONS_00063191 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TPM19.952e-2230.47Tropomyosin alpha-1 chain OS=Homo sapiens GN=TPM1 ... [more]
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