TCONS_00063199 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063199
Unique NameTCONS_00063199
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1095

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063199 ID=TCONS_00063199|Name=TCONS_00063199|organism=Clytia hemisphaerica|type=transcript|length=1095bp
gacaaaatacaTCAGTTCCTCAGTTTCATACCCCCGGTTTTTACGATGTA
CGTTTTCGAAAAGCAGTGAAACTTGAAGATGATGGACTTGTAAAGAAAAA
CGAGGAATCACGAAATCGCACAAGCCACATGCTGCAGGTAAAAGTTGGAA
TTTTACATGATTCATACACAAGACGACAAGACTTCATCAAGATCGAAAGA
AAtgctgattttactttttaaaagtaCAAAAGGTGACAATATGAAAGTGA
AGATGAAACAACGTTGAGCTGATATCAAAGAACTTGGGTTTGCAACTATC
CAGcTTCTGGCTGTACAATACCCGTATGTGGCAAGATTCTATCAGTTATC
TTTACTATCGATCATCTGGGTTCTCTGGCAACTGGAGTGGGAATAAACAT
ATAACGACCGACTATCGAGAGCACCTTTAACTTTCCTCCGATATTAGAAC
GCTGGAGATTTGctacaaagttcaaaaatcgcTTTCAANCTTTACTTTTC
CTGGGTTGGTGTACAGTTCGATTTTTTTGTAGATTGGTAATGGTTTGGTT
TTTCCAGATGGAGTTGcagttttgttgtttgttggtgGGTTATAGTTTCA
GTGTTGCCAGATGGGGTTCCATCATTGCTGTTTGCGGGTGGCTGACATTT
TCAGTGCTGCTAGATGGGGAGTTCCAGCATTGCTGTTTGCGGGTGGGCGA
TAGTTTCAGTGTTGCCAGATGGGGTTCCAGTATTGCTGTTTGTGGGTGGC
CGACAATTTCAGTGCTGCTAGATGGGGCTGGCTTGCAATTTAGTTGTTTG
CAGGTGGGTGGGGGTTTCAGTGCTGCTAGATGGGATTACATTTTTGTTAT
TTGCGGGTGGCTGACAGTTAGTTTTTATGGATGAGGTTGCAGTTTTGTTA
CTGAATGAGCTGGCAACTATGGTGTTCCTGAATTGGTTGTGCTGGCAACT
ATGGTGTTCCTGAATGACCTGGCAGCTACGCCGTTCCTGAATATATTGAC
AGTTTTTGTGTTCCGGGCTGGCATTTTGGtgttacttttcttttgtttgt
tggTGGTTggattgaaattttgattttttgggatGGGTGACGACN
Run BLAST on NCBI

protein sequence of TCONS_00063199-protein

>TCONS_00063199-protein ID=TCONS_00063199-protein|Name=TCONS_00063199-protein|organism=Clytia hemisphaerica|type=polypeptide|length=114bp
MVWFFQMELQFCCLLVGYSFSVARWGSIIAVCGWLTFSVLLDGEFQHCCL
RVGDSFSVARWGSSIAVCGWPTISVLLDGAGLQFSCLQVGGGFSAARWDY
IFVICGWLTVSFYG
Run BLAST on NCBI

transcript from alignment at scaffold_384:349545..374655+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063199 ID=TCONS_00063199|Name=TCONS_00063199|organism=Clytia hemisphaerica|type=transcript|length=25111bp|location=Sequence derived from alignment at scaffold_384:349545..374655+ (Clytia hemisphaerica)
gacaaaatacaTCAGTTCCTCAGTTTCATACCCCCGGTTTTTACGATGTA
CGTTTTCGAAAAGCAGTGAAACTTGAAGATGATGGACTTGTAAAGAAAAA
CGAGGAATCACGAAATCGCACAAGCCACATGCTGCAGGTAAAAGTTGGAA
TTTTACATGATTCATACACAAGACGACAAGACTTCATCAAGATCGAAAGA
AAtgctgattttactttttaaaagtaCAAAAGGTATGAAGTTTCTCtcac
tgttttcaaaaatgTGTATTAGAATTTAGGATAGGATTACTGTAGTAGTG
ATTATAGTTAGTACTACAACTCAATATAATCAAACTACGAAACTAATGAT
GATGAATGTTTCCTGTCACCTTGCTTGGGTATAATCTGTCATTTTGAATG
tttgtttttccaatttttttttatcttttgagtCTAAGCAAACAGCTGAA
TCATCCATCTGCTTTCAGTAATTAAAACNAATGATGATGAATGTTTCCTG
TCACCTTGCTTGGGTATAATCTGTCATTTTGAATGtttgtttttccgatt
tttttttatgttttgagtCTAAGCAAACAGCTGAATCATCCATCTCCTTT
TGGTCCTTTCAGTAATTAAAATTTGTATTGATAAAAACCAGGCACCAGAA
AAGTCTGTTATTTGGAGGTGATGAAAGTTATCCCTCGTTGTTTGATGAAA
GTATAACCCCAGTTGACAGTACCttcagaaaaaataacaataatatcAAG
TCAGCTGGTTTGGTCACTTTTTACACTGGTTTTCTGATTTTGAAGATGTG
GAAAATGGGCTGAAAAACAATTTGCCCTGACATTTTCTTTTGGGGAAAGG
ATTGTTGTTgatttttcataaactttatTCAGAAATACTTTTTCTGCCCA
CCATTTTTTGACACCTCTGACACAATCCTGCCGACAAACCCAAAATGCTG
GGGCTTTTCTTGGGTGAAAGACTTTGATTTTtcacgattttcaaaaattt
atatacTGTAGTACTGAAAGACCTTGACTTGTTTATTTATTTCGGTTCTA
TCGCGTACGTCTATAAAGGTATTActtctttattttcaagatGAAAGAAC
TTTTCTCTAAAAAAGTGTATGAAAAGGTGCTAGTGGGTATATCTCACTAG
TCCAATATTTTCTAGTTCAACAGCAAAACAGTCCGAATCTAGACAAAATT
GAATCTGACTGCTATTTTGTCCGAATATCGACGCACAATCTGTTATTATT
AACAAGCTTCTTCTTTTGTCTAGCAACGGCCTGCCCAAAACTAAGCCATC
TTAGAAACGAACTATTTTGCCAATTCTggtcattcaatttttcatatttc
aaataTTACCCATTCCTCTACTTTGTCACTAATATCAGTGAACTGTCTCC
CTCCCTCAGCAAATGGACGAACTGGCTTATTCCATGcacgatgcaaaaaa
aatttaattgccTGGCTAGTACAGCATGCTGCCGTTGCTTATTGCTGGaa
cactaattttttttctattactCGTTNNNACAGTCTCTCACGCTTAATCA
AAGAAATTAATANNCAGGCTGTGTGGAGTGCTTAGCATCGCCTTTGTCAA
AAGGTTGTCCTTGCTTTGGCACACAGTCTCTCACGCTTAATCAAAGAAAT
TAATAAATTGCGTACTTTTTATCAATgacatttgttcttttttattttca
agataaTAAATAGGGagcaaattctttgaaaagaaagtgtaGGGAATGGT
ATAAGCATAGCCAGTATTTGTCATACAATCTCATTTTCTAAATCAAGAGt
aaagttgttgttgttttggggCTTAAGCTAAACTAACCCACTTCGCAATC
aatgtttttatgaaattgggGGTTGGGAAACAGGCTGTGTGGAGTGCTTA
GCATCGCCTTTGTCAAAAGGTTGTCCTTGCTTTGGCACACAGTCTCTCAC
GCTTAATCAAAGAAATTAATAAATTGCGTACTTTTTATCAATgacatttg
ttcttttttattttcaagataaTAAATAGAGagcaaattctttgaaaaga
aagtgtaGGGAATGGTATCAGCATAGCCAGTATTTGTCATACTATCTcat
atggacctacctggagttCCTATAAATTTACCTGTGTTCGTTTGTCCCTT
TGTTTgactgttaccaacttttctcagtaTTGAATTATAGGaatcttttc
tttttggcacaaagatgcagaATGGAGGTTGGTGGTCAAATTGTGACTGg
cccaatttttgaaataaaattcttgagtaaatttcatctaaaaaatggct
aaaaatagggttttttagaCTAGGTGCAAAATTGGATCTTtccatttttc
tcttttttttgcatGTCAGAAggagggtaccatcataggttaaagttggc
tcaagcagattttcataaaaaagatttttggctgaaaaaacgaACCTTCA
TCTATTAAAATCACCATTTATTAAgtatagatcaatgttcttagctaaat
tattatttttatcatttttttaaatgaaaatttcacGGTGGAGCGTGATT
GTTTGAGTTCACAGAATAGAAACACTTATTGTGCTcagcatttttctgat
agtggattttttaaaataaaaaaaagtgtttgaGAGCTTTTGGACCtact
tggaggtcctataaattaaccgttgccCATTCGTTCGTTGTGATGATGTG
CTCATTCAATTGttctgatattttgcacaaagaatCAAAATGGTAAACCA
aggatgtaaaaataatagataaccaactacctctagaaggcacttctccc
aagagaacaacccatgttttcctattgaaatgagcactctattaaaaagc
tctgtgtaCAGTgtttgttatgcttttagctagattttgacacacttttt
gacatccactgaattgatagaaaatttgaattgttatttactgcacattt
tggaatttttttcaaaagataaaggtaccaatctttagacaaattgacta
cagatcggcctgataccacttaatcttcatctggataaataaacactcat
aaaatgctgttatctgaaaaatatatgtgtgatttgaaatgcgatatctc
gcgtatgaaaagtgcatgaaggttgcatgatacaaaataaacagatgaat
gtttacagaacaataatatctaattcaaaaaattccttctgtgaagctgc
ctataggaaaatacactttttttaacccaaattttgtaaaaatatgcatc
acgtgatcgattctgtccaatagaaggttgcaaataaagcaagtttttat
ttaattgcactttttacgatgcaaaatgtcatcaatatttttacaaccgt
aacacggatgttttttgagaatcaaggcaagttggttatctattattttt
acatggtTGGGTAAACCCTCTGATGGTGGAgcctaattaaaaaaaatttt
gaggtcaatcaaagagatagaaaatagagGAGGTTGCANNNNNNNNNNNN
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NNNNNNNNAACAATTTTCCTTGGTAGAGGATGCCTTGAGGTATGTATATC
TGAAGTTTCTAGTGTGGTCTGGCTCTTTTCACTGTGGTCTGGCTCTTTGA
GTTCAGcccatttttaaatttcatgtaCTCAACCATCGACTAGGTAGTTC
TTCCAGTTCTTGTTGTCTTTCACTTTGTTTACGTGATCAGCTAAAAGTTG
GCGGTTAATTTCGAAAAGTTTGCTTCTTGGTAATACTGAAGGAAGAGATG
GAAGAAGAATTTGAATTTCGTCGCAAACAAACAGCTGTCTTAGTAAAAAA
GTAGTGTAGATTATTCGGCGGCCGGTGCGTGATATGATAAGCCGattcat
cataaaaagtaagacTGTAGAAAACTTAAAGAGACAGCTTCTTTTAAAGA
TGCTTTCAATGCTTTGGGAGTTGATATTACTANNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNTGTGAAAAGTGTAGAGTTGTTTGTACGAGTTTGAATCA
GCATTGAAAGGCACCCAGAGGCACCCAAGCTGAAAGTAGGAAAAAAGAGA
AAGCTAGGCATAAATCAACACAGTGTgtataaaaacaacaacagcATCAG
ATATTGATACCAGTGGTTTCGCAGATTGTGTTGATGGagagaaaatttca
gaaattaaagAGACCGTGGCTTTGTTTAATTATTGATGCTGAAGACTTTA
TATTTgttattgattgtttttttttgaattgctgAATTGGGTGAAATAAA
TGAGGAAATCAATAAGTTGGAAAGGCAATGTAATGAGGAGGGCCAACAAG
CAAGACAATCAGCCTCGCATGTTTTAGCTTTCATTGTACGAGGTATCTAC
ACTGgattacttttgtttttgttttttccctaCTGCCATCTGCTTCAAGT
GATGAGTTATTTCCTGTTGTCTGGGAGCTGTTNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNTCCCTCAAAATGTCATCCATATATCGACTG
TACAACCTTGcgtcatctttgatcgaagaATCGAAAGTGCTCATCCAGCC
ATTGGCAAGCATCGGTGCAGGTGGGCTCCCCATGGCCAATCCATCATTTT
GGCGGTAAAATCCATCGTTTGTTAGCATGATTACATTCTTGCTACACATG
GTGACTAGCTGGACAAATGTTTCCTTGTCGACAGGTGGTTTTTCATAACG
TCCGTCGTAAAGAAGATCCGCACACACTGAGATTGCATCATCAACCGGGA
CATTCGTATACAGTGATACAACATCAAAACTAACGATCTCGGTATCATCA
TCAAGTTCAATATCACTCAAACTATCGGCTATTTCTTTAGTAGAAGAATT
GATGCGACATTCTGACACTACTGAGAGCCAATCTGCGACTTGCTTTGCAA
TTTTGAAGTAGGCTGAGCCAGGCATTGACAACACAGGGCGTAAAGGTACA
CCATCTTTATGTATTTTGGCGAGTCCATACAAGCGTGCTGGCTGACTACC
ACctggttttaattttttgaaaatggtttcggtaattttattttcagcct
aaaattttGTAAGCCAATGGTTTGTCTATTATTTCCAGAGGCATTACCTT
AAATGATATCAATGATgatttgtttgaaatatttatcaCTACCAGgtgtt
gaaattcaaaaaaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNATGATCAAATTAACAAGAGAACACATCGACTAAATATGATGAAC
GTTTAAACTTGCAGCTCAGGTAACTTAGATGATTACCATATTAACTCAAA
AAAAGTGCCTATATGTTATCTAATCAGGCTAGGTAAAGTCTGAGAATTAG
GTTTGTCTGAAATAAAATGACAATAAAAATCCCATGATATGTATTCAGGT
ATTCAGTTCATGTTAATGACATTGAAATGACTATAGCTACAAGTCTGGTC
TCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNTCATGCTCTTCAGTATCAAAGGCAAGC
CCAAAACTAGAGGTACACAAAAGTTTGTCAGGATCTGcgacaaaattttt
gattgcCTAAATGGACAGTATCCTAACCAAGATATGGCAGCAAGAAAACC
GGCAAAACCTGCTCTCAGACAGTACACAGAAACAAAAGACAAATGttttg
aggtaatttttatccTATATTTTTCAATGGGATTAGTTTTTGTAGGTATT
CTCACTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNTTTACATTTTGGATCATGGTCGTCTTAGTCAGCCAACCTCAA
CTTATGTGGGCAGGTCGTTCTGAtggttttttctattgtttaaattattg
ttatttaaaaaattgtttttttagattttagctTGATTTTAGCTTTGGAT
AAATTCCAAATACTTTTTGTGGAATTTCGAACAAAAATTCATTAagcaga
aaaagtaaataaacagaaAGGATACCTCTTACCTTTACACTTGTGACAGT
CTGTGACATgagatgaaaaatttgaagttatAATCTTAAAGTTTTTGATC
ATCTTATATCTGTATATCTTCTCTCTATTCTCTCCAAACTGATCTAAAAT
TATATGATCTCAATACATTTGTTAGTAGATATTTATCTTTTGATGATAGT
TCATTATATGATCAAAATATATTatgatttttgtagaaaaatatacattt
tttagCTGATAGAAAAAGCTAAAATTGACAACTGGTGCTAGATTTCTCCC
TATACTTACCTTAACTTATTGGCAGCTATATAGACTTTCATTGAAGTAAA
CCTTTCTTTAGAACGTGAGAAAGTGAACGGTATATTTCAAGAGAGCTAAT
AtctaagaataaatttccaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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TCTGCCCgttctactttcgttttcaagcacttttttacGGCATTGATTAT
ATCTTTTTGAATAAAACACCGATTGTTTCAATTTAGTCGGTTCcgtaaaa
ttttctctttttttcttccctcattAATTATTCATGATCATAACTAACAT
AGTATAATAGAAAGAGAAACGTGCAACCTCctctattttctatctctttg
gGTCAATTTGGGACAAAATatgcctaaaaataaggttttttgagatttcc
tcgagtttgaatcattaaaatgtttatgattttttgcataaaaacaGACC
TCCATCATAGAGAAGAGAAGGTCGAAGcagattttcttaaaaaaaatttt
cagattagaaaataaatttcttgCTGTAAGGACCACTATTATTTTATAAG
CACAGATAAATTTTCTTACCTAAATCGCTCATTTTCTTGATTTGATAGAT
GTTTTTTGTTTGCAATTGAAATTGTACCTTTACAGAAGATTGGAGCTTAg
gcttgaaattttgagttctgaattgttttttgtaagaactaggCCAAATT
CttaatttatttataagcacattggAAATAAACCTTTTTACTGGCCTGAA
GAGCTTAGAAATTGTCATATTCCATTGAAATATACTTTTTGTTTGGATGA
ATTTCTACAGTTCtacttttcattattttgaaatttatgtaaaagaatta
ttttgtGTTGTCTGAGTGAGATTTTTTTGTCACTCGCATTTCCAGAAACA
ATATTTCCTTTTTGTGTAAGCGTAACTTTTAACAGAAGATGCTTTGCTTT
ATAATGATATGGTTGGATTACTAGCTCTGATacagataaatgaaaaaaaa
gaatattttaagaatataTCACCCTTAGATTGGTACTTATTCCTAAGAGT
ACTTTATTTTCAGATGAAAAGACCctggggggtacttaggcaagatgggt
gccgggtatgtgcgagccataagggtaccttttctcattcctcaaaagtc
tctcataggggtacaaattcaaaagttagtctctgaaagggtcccaaaat
cacgaaaatcaaaaatttctctctcaaagggtcacgaatttcaaaaattt
tgaccaaaatttggtgacaatcaaaccaaaatttggaaaaaatggaccaa
aattttggaaaaagtctctcaaagggtcccaaaatcaccaaaattgtctc
tcaaagggtctattttcgatttttggctcggacatacccgtcacctcgca
aacctagtaccccccccccgggaaaagACCTAtattaatagaaaaaaatt
tgtgtaGACAGCTGATTATTAAATTGGGGTTCAAGGTGCAGTTAAAGGGT
ACACAATTGTCTGTGACTGTCTAGAGAAAATTGGTTCTGGAGATTTTTAT
CTTACTTTTTAAGCTTTCCAGCCCAAAAGACGTATATTTTTGTCTTCAAG
ACCTTAAAATTTGATCTAATAACGTCAAAACTGTTAGAGATACTGcttaa
attgaaaaatcagaaagattgGGAAATctccaataaaaacaatcagggtt
ttgttttgatgatgcGCTTTTGTGTAAACAAGCGTTTACATAAAGGTTAT
GAAgccaaaaatttacaaagaaatTTTGGTATTTATAAAAGGCCGATTTG
TTTCATCACTATTATTGCTATATTTACTATAAGTCCTCTCATTTCAATTA
TTTGTGTCCAAAACTTTAgcactttttttaaaataaacttGCAAACTCCC
TATCAGCAAAAATAGTAAAACCTCAACCTTCTGCAAGCAAAGCAAAGATT
GCAATTTCTTCCAGTTTCTTCGCAGTAAAAATCTTAAATCAGACTGGATG
ATGTTTTCTTAGCCTGATTGCCGACTTTAAACTAAAGTTAGAATGAGTGA
AGAGCTGCAACTGTAGTTTGCTCCATGCACTGGTCTATATCTGAGATCAA
AATAGCAGTTATTTTCATAATGGTGGAAAAGTGGCCACACAGCTGTGAAT
AAACAATTGATTGAaagttactttttaaattttaaagcaCAACCAGGGGT
CGTCAAGATAGCAGACAACAAAACTTGCAATATTTgctatcattttcaaa
gttttcatggaATTTCATAGCATATCTGCTAAAAGCAGATAGCATCTACA
GCATTTATAGTAAGTGAAACAAATAGGTCCAAAGTATTTCAGATGTTCAA
ATGACTCTTAAAAAGTATAGATTGTATTATTTAGctataaaaaaaagagt
tttgattaattttttagaTAATAATATTTGAAGATTTGAACAAAAACGAC
TTTTTAGCGACATTGATTTTTCATATACCTTTTGTGTTGCCTCGTAATTT
TTGCCCTAAATTAAATCGAATGTTCACTTGGAcatatttctataaaaaaa
tgttgcgcACTGGAAAGGTTAATTAAAGAAATGATTTGTATACTATAGTT
TGATGGTACATTATTAGACCTTTAACGCCAACCCTTATTGGGGTTATTTT
CGGGCGTTAAAAGAACTGGCATTTAAAAGGGCTGATATATTCAATGTTTT
ACGAAAATCAGTGATTTCAACTACTTAATACCAACAAATTTTAGTCAATT
TACTTTTTCGAGGCCTAATTAAATTGTGATTTTTGTACGTTTCGGTGTTA
TATTTACGACCCTAATAGGCATAATCCCAAAATTAGGCTGCTGGGTAAAA
TGGCAGGGATCAcagtcaaaaattgtgtgacattgttggaaagtcagaaa
aatgctctttttggtaaatttagaataaaatcaTGAATAATCATTTTCAG
GCTTTTAAATTTTACACCCAGGGTCGATGTCTTAGCACGGTATTGTCATA
AATTTTTCGGAAGATTTTATGGGGTATTTTTGAGGTTACCATCATTTTTA
TAGGGTAACCTTTGAAACACCAcatcttttagtaaaaaatattttgacct
cTAAAAACTTGAGAGCATACTCCATACTGACATGGCAACACTTGGTCAAA
AAAGGTGCGGAAAATATTGAAGATTTGTTGTGATTTTTTAGGTTACTTTT
CGGTGGATTGTAGTAACCTCaaaaacccatcaaaatttgaattttaaaga
ttcTGATTTCTTCTActtctaatagaccttttttcaaagaggatgtcctg
ttgaataattatgtagtccagccataaaaacaatgatagagccatgcata
attactgtatcatgcatattgNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNtatcatgcatattgtaataattat
gcatggttttatcattgtttttctgctggactacataattattcaacagg
gtggcctctttgaaaaaaggtctataaaccATCTTGAGATGTGATTTACT
TTATGATTTGATGTTATAGTCATGCAAAACAAATAATATTGATCTTTGAT
TAATAGCCTTATTAGCTTTAACTTAACACAGGATTACAGTGAAAATGGTN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTT
CTACAAGAGTAACCTTAAATATACAACCTTTTTGTTTATCAGTCATAATT
TTCTTGATGAATTTAGCTTCTATTACCTTTATCAAACCAATTGCCAACAG
AATATCCACTTTTTATGAAGACAATTAGATGATAAAAGGGGTTTATGAAA
ATTGTGAATTGGTAACCTCAATTTAGCCCCAAAAATACAGCTTATAAGAA
atccaaattagtttttgcttAGAATGAGGCCTACTTGAGGCATATttaat
tttgagcaattttgctTCAGTAGGTATTGATTTATAAGCTTTAGAATGAG
GTAACCTCATTTGGGTAACTCAATTTAACCACATCATATTTCTAAGTATT
ACTCAGGATTGAAGTAACCTCTTAAATTCGCGTTTCTTCTAAATCCACCT
ACTTGAGTTcttcaaagttttgatatggTAACCTCAAAATTCCACCAGAT
ATGGTATCAGATATGACAGAAGGTAGAAATGTCACAAAACCCCCTTTTAT
TTCTGACTGTGTTCCAGGGCCAAAAAGATACTTAGTTAGAAACTAATTAA
AATTGACTATCAAATAATAAGGGTACCACACAGTCATCAATTCTCTTTAA
TTTTCACCTCATTCTTCAAAGCTCTTTGAAAGTTTGTAGATTTGTAATCT
TGATCATTATGCACAAATTAGATTGAACCCATGAAGCTTCAAGCTGAATG
TCGCTTTAAACAGGACACAATTTATACAAACTTCAATCATATCGACAGAT
TATACCTAGCCCACTTAGTGTTAAGGCAAGCACCAGTGAGCTCATCTGAA
GTTTAATATTGTTAAAAAGTGAAGttaattttaagtaaaacaGGACAGGA
AATATATTTATATTGtatgaatttgatttatttaattGCATCTAATATTC
TTTTGATAATGATTTAGTAGAGTCCAGTATTTATTTCTTGTATTCATCTC
TAAAACTTTTTATTCATACAGGTGACAATATGAAAGTGAAGATGAAACAA
CGTTGAGCTGATATCAAAGAACTTGGGTTTGCAACTATCCAGGTGtttct
ttttacaatttttcattATGGCTTCTAAGCTCGTAAACTCATGGTTTGAT
GAGTGTGTTTCATTTATTGAGAACAAGTACGTCTTGTTAAACAAGTTGAA
AGAAAGATTCAGTCATTTCCATTTTCCTTTTGGTGAGGAGGTTGATAATG
ATTgtttagaaaatgaaattaaaagaattttcatGGAGAAGGGTGTCAAG
TTTTCCtcgaaaattttcaggaaacatggaaagaaatttttgaaggtATT
TAGAGTTGAGTTGAGGAGGGATTTGAGCATTGCCCATAAAGTTTCTGTGA
TTAAAACGGTTGGAACATGTCAAGAGCTATCCATGTCCCATGAAGGAATG
AATGCTGAAAGTGTAGCTGACGAAGAAACAATGTCCAACTGGGACAATGA
TTGTTTGCCTTTAGAGACTTGTTCAGACCTTAAAGATACATCAATTGCAG
ATAAAACACCAATAGTCCAAGGAAAATTAAGTTTACCAGGTGATTCTTCT
ATGAGTGAAAATGGGGTTGAGGAAATGAATGTTACAGGTTCCATTTCTGA
TTTTGAGTTCAATTCCTATTCTGTCAGTGACTCCAGCATCTCTCCTATGT
GTCCAAAAAGTAGTTTTCTTGAAGGTGAGGATCGTTTCACTTCTGAGGAT
GAAAGTAGCGATGTTGCAGTGGAAGAAACCAACAGTGGGAAATATCCAAT
TGAACCTGTTTCGGAAAaaccttttgataaaaaattggaCAACAACCCTT
TTGGCAACAAGTCCCCGTCCTCATCTAAACCTGCAAAGTGTGAGATTCAC
AATGATACtcaagaaacaaaaagaaagaattctTTTGTTGATTATTTTAA
ACAAAgccaaacaaagaaaagatcgTCTGACACATTATCAACATGCCCTG
CAAAACAGTTTTCTTTTAGAAAAGTAAAGGAATCTCTTTACTATGACAAT
TTGGtcttttcaagattttatgAGAATTACAAAACAATTACGCCTTCTAA
CCTACCATCATGCCAATTTGATAGCTCTGAAAAATTCCTTGATGCAAAAT
TTCCGATATCTGGTTGCGAAAAAGAGAAAATGGCAAATATAATAGACAGG
GCAAAATCTTATAAAGGTTTTCTAGAGTTAAAAATGAACGTTTTTTTATG
TGCTTCTTTTCCACCAATCCCAGCAGGAAATCTTGTAAAACAATTTATTG
ATTATATTGAACCTGGTACTCCAATACCACAATTTTCTTCTCTGAGCTGT
GCTTCAAAACTGTTGTTTAAGTGTGAAGTGTGTGAATTGTACTCTTTTTA
CCTGAAAACAACTGGCAAAGGCTGTCAAACAGGCTTAGGGAAACTGGAAG
GCTGTCGCCAACTGTACGAACATGGAAATGCAAACAATTAACgcaattga
atttttgaaaagtcaatCAAAAGAATCAGTAAAAGTTATCACGCATCAAC
AATCTAAAAAACATGTTTCCAACTACTTTAAAGATTTGATATCAGAAAAG
GGTAAACAAGTTCCTTgtatgtttgtttgtttgggACCAAAAAATAGTTA
CTACATTTGAAGACGATCAGTCAATAAGGCGCAAATCACCTAAGACCTTT
TTCAAAGAACAGAAATTGTGGAAAAATTGTGAAGCTCATCATCAAGACTG
TAATATATTTGCaaactggaaaaaaaatcactcgGAAGAGCATGCTAAAT
TATGCAGGGAACTTGAATTTCGATCTGGCAGATCTGTTTTTGTCCCAGCA
AACAACCAGAAAATACTAATTCAAGGTGAGACGGTCACAATTAAAGGCGG
TATAAAATCACTTGATCCTCCATGCTTAGGATCTGCAGTAAATATTGGCC
CACACCCTTACACTTGTCAGAATTGCCATCGACAGCTAAAAGATCTCAAC
AAAGTATTGAAAAGTCGTGAAAATAAAGCCTCACTTCCTACAAGTGAATC
AAGGGTTGGGAAAAAAGGCATGAGAAAAGATTATTACACTAAAAGTGAAA
AGGAAAAACACTTTCATGAAACCTTTCAAAGGAATGAAGCGttagtgaaa
gaaaacaaagaataCAGAAGAATGATTTACAGTAAAACAAACTggcaaaa
acttttacttgaaAGTTGCGAAAATGACGACGTTAAAAAGCTAGTTCTAG
ACCTTGTATTCTTACTCAAGCAAAGCATCaaccaaacaataaaaaaagaa
atcatcaCAAATGTTTTAGGGAAACTGAAATCTGGGGTTAATCACAAATT
CAAACCAGTAATTAAAGATATTGCTACGTTTTTTCACAATTCTTTAGGCC
CCAATAAGTACAGCTTACTTCAGGATCTATTTGGTTTACCGGGTAAAACA
TTAGCCAAGTCTCACGGGAAGCAGACTCAACTTTGTCTGGGGTTAAATGA
GAAGGTGTTTGAAAATGGCACGGTGTTGTACGATGGGGGACCGGTTGTTG
ATGCCACAGATGAAGCAAGAACTTTGAGGTTTCTCACTGCTGTTGTTGGG
AAGGATGAAAGGATCAAAATCATTGGTGAATGTTGGGATCCAGATATCAG
CAAGTGGGAGAATTCGAGAGTCTTTTTGGAGGATATTGTCAAGAAAGAAG
GATTTGTAGATGAGTTTTCTGCTCTAGAAAATTATGTCACAAAAACAATC
AAGCAAAATCAACTGGCTAAAGATACACAATTTACTTTCTGCATCAGGAG
TAGAGTCTAAACCTTTGATATATCTAATCTGGCCCACTGCCAATTCAGGT
TACCGTTCTGtgcatcttttgaaaatttgggatGTTGTTAGACAAAAATG
CTTTTTATCATCATCTGGAGAGTTGCGAAAAAAACCGATCAATCTTGTCG
GTCATGCCTCGGATTCTGCCGGCTTTCAATTAGCTGCAGCTGTCACTTTA
ATGACACCTTTAACTAAAGCTTTCCAAAAAGACATCAAGTATTTGACTTT
GGATGCTGGAGCAAGCCAGTATGCTGCCCCATATTTTGGTCCTTTACCTT
CGATTGCTTACTTGGATTATGACCACAATCTTCGCCTTTTCCTCAAATGT
TTGAAGTACGAGACATTAGATCTCAACTTATTTCCAAATTCATCTAATAC
TCACATTGCATCCATTAATCATCTTCAAGAACTGAAGATCATTCTTGATG
ATTCTGGTAATGGTCATCTTTGCACCTTTTCAAACAATGATCTGCTTTTT
GCTCGCTTCCTTGATCAAAATTGTGATGCTGCTTTGAAGGTGTTCACCAA
TAGAATTGCAGATCTTTTGCGGGAGCATGTTCCAGGCTCAAGTGGGACAT
CTTTATACATCAAAGGTGTGGTAGCTCTGTTCAGACCATTTCTTTTTCCA
GAATGTGACCCTATTTCAATAATGGAAAGTTTGTCAGAGGGAATAACTAT
TTTTAGAATCTGGAGGAAAATATTGCAGCTTAAAGGTAAGAGATTGAGCG
CTGTTGCAGGGGCAGCAAAAAATGCTTCTAAACGGGGTAGTTTTCTCACT
TATGGATGTTTCAAAACTGCTGAAATTTTATTCGCTGCTGGCACGTGTCA
CATGTTAGCCATGTTTGCTCATTTTAAAGATAAGGGCACATCGATGCTCC
CCCTTTCCAATTGTGGCACCAAAACTACTGAGAGGATCATAAGCGAGGTT
CAAGGAAAAACAAACCAGTTGCAATCTTTAGATGCACAGCCGACATTAGC
AGGAATCATGAGTAAGATTTCAAAGGTGCAAACTAATCATACTGCCTTGG
TAACATAATAGCGGCTggaggaaaaaaaacaaatNTTGTTAGACAAAAAT
GCTTTTTATCACCATCTGGAGAGTGGCGAAAAAAACCGATCAATCTTGTC
GGTCATGCCTCGGATTCTGCCGGCTTTCAATTAGCTGCAGCTGTCACTTT
AATGACACCTTTAACTAAAGCTTTCCAAAAAGACGTCAAGTATTTGACTT
TGGATGCTGGAGCAAGCCAGTATGCTGCCCCATATTTTGGTCCTTTACCT
TCGATTGCTTACTTGGATTATGACCACAATCTTCGCCTTTTCCTCAAATG
TTTGAAGTACGAGACATTAGATCTCAACTTATTTCCAAATTCATCTAATA
CTCACATTGCATCCATTAATCATCTTCAAGAACTGAAGATCATTCTTGAT
GATTCTGGTAATGGTCATCTTTGCACCTTTTCAAACAATGATCTGCTTTT
TGCTCGCTTCCTTGATCAAAATTGTGATGCTGCTTTGAAGGTGTTCACCA
ATAGAATTGCAGATCTTTTGCGGGAGCATGTTCCAGGCTCAAGTGGGACA
TCTTTATACATCAAAGGTGTGGTAGCTCTGTTCAGACCATTTCTTTTTCC
AGAATGTGACCCTATTTCAATAATGGAAAGTTTGTCAGAGGGAATAACTA
TTTTTAGAATCTGGAGGAAAATATTGCAGCTTAAAGGTAAGAGATTGAGC
GCTGTTGCAGGGGCAGCTAAAAATGCTTCTAAACGGGGTAGTTTTCTCAC
TTATGGATGTTTCAAAACTGCTGAAATTTTATTCGCTGCTGGCACGTGTC
ACATGTTAGCCATGTTTGCTCATTTTAAAGATAAGGGCACATCGATGCTC
CCCCTTTCCAATTGTGGCACCAAAACTACTGAGAGGATCATAAGCGAGGT
TCAAGGAAAAACAAACCAGTTGCAATCTTTAGATGCACAGCCGACATTAG
CAGGAATCATGAGTAAGATTTCAAAGGTGCAAACTAATCATACTGCCTTG
GATAACATAATAGCGGCTGGAGGAAAAAAACAAAGTTCAACAAACAGGAG
AAGACTATCAGACAAGCTTGTAAAGGCAGCCAAATCTGATTATATGTATC
CCGAGTCTTATGCTGATTTTCAGAAGCAGCTGACGATTGCCTTCAAAAAG
GGTGTTGATAAGGGTATCGACTTGTATAGAGAATATTGCAAggaaggttt
gaaatttttgaaggaaaagaaGGTTAGTCTGAGTTTTTTGACTGAGTTTA
AGAATGGAGTTccaaagaaaaacatgtttgATGGCTCTGTAAGTGAGGAA
TACGCCATGGAGAAATTGAAGATGAATCCTGCAGAACTTTTTGTTGAGGA
TGCTGTGAGTGAAGAAAATCTTATCACTAAATATCTCAATCCTGAAGATA
TTGGTAAGATTTGGGACTCAGATAAAGACAGTGACAATGTCAAAGATGAA
GAATTGATCCCTGACGAGATGTTGACCGATCTTGAGTCAAATGATGACAA
GACCGAAGGTGTAAATTCCGAAGGACGAAAGtggtttctttcaaaaataa
tcaatgGAGAAAAGAAAGAGATTCATCTGGCACAGGCTTTGAAATTGCTG
ATCCCAAGAGAGTTTGTTTCAAGAGAACGTTCACGTAGGCACATTGCATC
GAAGTTTCTTCCAGATAGAAAAGAGATAAATGAAAGTCACAATGTCATTC
TTTTCAGGTTTGTTGTTGCAAAGATTTCAGGAAAGATCACCATTTGCAAA
GTCGCAGCTTTAAATTCGAGTGGCAAAAGTGTCAAGAGTGCTTCTAATTT
GGATTACGGTGTAACATGCCAACTCATTCCTCTTAAAAAGTCGGAACAAA
ATTTGTATGTGTTGCCTCAGAAAATCCTTGTTAGCAGTTGGATAAATGTT
TGCAATATTTTAGGAGAAGTCAAAATGTCTTGTAACAAATCCAACCAATT
TAGTATACTGGAAAAATCGCTTAGTGTTTTGGAAGAGGCTGAACAAACTC
TCAAGGAAGCTGCTGATCGTAAATTTGCTCAAAGTGTTTCGAAAAACCTG
CTACCTGCAGAATTTTACGAGGTAGAGGATATCATTGATAAGAAGATAGA
TCCAAAAAGTGAAGAGTATTTGTATCTTGTGAAATTCAAGGGGaaagaag
actctccagtgtgGCTCAACCAATCTTGTTTTGATCGTAAAATCCACTTT
AGTAAGAGAATGGGCTTCAAATGTAGCGAAAAGGTATTTGCCTCTCAAAA
CTCATCTTTTATGGAGTTCGCTTTGAAAGACGGAAAGTCTTCTCATCAAA
CCTCTTCTTCTGCAAAGCGAAAATCATCTAATCCAACCCTGACACCAATC
CCTTCTAAAAGAAAGCGAACGAAGCAACCTGTCTCTGTTTCTGCAAAGTC
GAAATCCATACTTAAGGcattttcatttgataaaacACTGTCTTTGAATA
AAAAGGAAGGTTCTGCTGCGGTTGATGTCGATGTTGTAATTTCTTCTGAC
ACTGAAGAGAGAAGTGCTGACCGTAGCGACGAAAAGATCTTTCAGGATGC
CATGAAAAAGTTAAGGAACGGTGAATGGGTTAGTGGTGTTATTGTCAAGA
AAGCTACTGATATATTGAAAACACAATTTCCTCATCTTCAAGGGCTCCAA
GAAACTTTGAAATCCAAAAGTCAATTGTCAAAGTTCAAAGCAGTAGATTT
CGAGGTTGATAGCATCCAAGTTCATCATGCTGGTGGTTGCCACTGGGTTT
TTTCatcgtcaaaagagggcaacgTTTTTGTATACGATAGCCTTTATGAT
GAACCTACCTTATGATGATTTGAAACTACAGTTATTGCTATGCTATAAAA
ACTTTATGAAAGATGGTCAGTTAAAACTTCAATATAAACCAGTTTCAAAA
CAGGCTGGTTCAACAGATTGTGGTATTTTCGTCATTGCTTATGCTTTCGA
TATTGCCAGTGGGAGATCCCCTGAAAAAATCATTTATAACCAGTTTACCA
TGAGAGCACATCTTTCGACTTGCATTAATAGAAGGtctttttcacatttt
ccaGTTGTTCTCAATGATAATTCAGATACTAAAATTTGTTCAGTATTTAT
GATCAAGTAGACCAAAACATTTAAGAAAACACGATNGGGGGGTGGAATGG
GTTCCCTGATTCCGTGCGTCAATTTGTACCTAAATTTCCGTCCGTAAATT
CCGACACAGCTTTTTAAGAACGTCTTTACAATGTGTTCTCCTCGAATTCA
AGAGTTTTCGATTTGTTCCCCTTTTCTATCTCTTGCTCTCAGAATTTTAC
GCTGAAAGTAAGCCTgaatttaaagcccgaagggctagaagtgaaTCTCA
AGTCTTTCCCGGACAAAACCAAGTGATGCTTCAACAATTTTCACCAAATA
ACGGATGAAGAATTGAATAGAAATGATATTTTTTCCGAActgtcatattt
tcaaaatctagCGGTAAACGCTTTTTTCAATCTTTGCATTTGTATGATAA
CCATGTGGGTCGCGCAACTTTGGAAGATTCgtttctagccttcggcttaa
TTCATTGTGCCTGAGTGTGTGTACTctattttgcttttcttttctttaag
cTTCTGGCTGTACAATACCCGTATGTGGCAAGATTCTATCAGTTATCTTT
AGTAAGTggcttttaaaataatttttgttagtttttaattcgcgaaattt
tattGTAAACTTCGCGGTTTTATGGCATAAAAGTTGGTACGATTTCTCTC
TTCTGGAATCTTGAGTGTAAGTAAAGAAATTGTGGGCAGAATgttgattc
attttttttttacctttcagCTATCGATCATCTGGGTTCTCTGGCAACTG
GAGTGGGAATAAACATATAACGACCGACTATCGAGAGCACCTTTAACTTT
CCTCCGATATTAGAACGCTGGAGATTTGctacaaagttcaaaaatcgcTT
TCAANCTTTACTTTTCCTGGGTTGGTGTACAGTTCGATTTTTTTGTAGAT
TGGTAATGGTTTGGTTTTTCCAGATGGAGTTGcagttttgttgtttgttg
gtgGGTTATAGTTTCAGTGTTGCCAGATGGGGTTCCATCATTGCTGTTTG
CGGGTGGCTGACATTTTCAGTGCTGCTAGATGGGGAGTTCCAGCATTGCT
GTTTGCGGGTGGGCGATAGTTTCAGTGTTGCCAGATGGGGTTCCAGTATT
GCTGTTTGTGGGTGGCCGACAATTTCAGTGCTGCTAGATGGGGCTGGCTT
GCAATTTAGTTGTTTGCAGGTGGGTGGGGGTTTCAGTGCTGCTAGATGGG
ATTACATTTTTGTTATTTGCGGGTGGCTGACAGTTAGTTTTTATGGATGA
GGTTGCAGTTTTGTTACTGAATGAGCTGGCAACTATGGTGTTCCTGAATT
GGTTGTGCTGGCAACTATGGTGTTCCTGAATGACCTGGCAGCTACGCCGT
TCCTGAATATATTGACAGTTTTTGTGTTCCGGGCTGGCATTTTGGtgtta
cttttcttttgtttgttggTGGTTggattgaaattttgattttttgggat
GGGTGACGACN

Coding sequence (CDS) from alignment at scaffold_384:349545..374655+

>TCONS_00063199 ID=TCONS_00063199|Name=TCONS_00063199|organism=Clytia hemisphaerica|type=CDS|length=345bp|location=Sequence derived from alignment at scaffold_384:349545..374655+ (Clytia hemisphaerica)
ATGGTTTGGTTTTTCCAGATGGAGTTGcagttttgttgtttgttggtgGG
TTATAGTTTCAGTGTTGCCAGATGGGGTTCCATCATTGCTGTTTGCGGGT
GGCTGACATTTTCAGTGCTGCTAGATGGGGAGTTCCAGCATTGCTGTTTG
CGGGTGGGCGATAGTTTCAGTGTTGCCAGATGGGGTTCCAGTATTGCTGT
TTGTGGGTGGCCGACAATTTCAGTGCTGCTAGATGGGGCTGGCTTGCAAT
TTAGTTGTTTGCAGGTGGGTGGGGGTTTCAGTGCTGCTAGATGGGATTAC
ATTTTTGTTATTTGCGGGTGGCTGACAGTTAGTTTTTATGGATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039597XLOC_039597Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063199-exon-scaffold_384-1491911889:349545..349776TCONS_00063199-exon-scaffold_384-1491911889:349545..349776Clytia hemisphaericaexon
TCONS_00063199-exon-scaffold_384-1510915933:349545..349776TCONS_00063199-exon-scaffold_384-1510915933:349545..349776Clytia hemisphaericaexon
TCONS_00063199-exon-scaffold_384-1575043694:349545..349776TCONS_00063199-exon-scaffold_384-1575043694:349545..349776Clytia hemisphaericaexon
TCONS_00063199-exon-scaffold_384-1491911889:366266..366336TCONS_00063199-exon-scaffold_384-1491911889:366266..366336Clytia hemisphaericaexon
TCONS_00063199-exon-scaffold_384-1510915933:366266..366336TCONS_00063199-exon-scaffold_384-1510915933:366266..366336Clytia hemisphaericaexon
TCONS_00063199-exon-scaffold_384-1575043694:366266..366336TCONS_00063199-exon-scaffold_384-1575043694:366266..366336Clytia hemisphaericaexon
TCONS_00063199-exon-scaffold_384-1491911889:373695..373745TCONS_00063199-exon-scaffold_384-1491911889:373695..373745Clytia hemisphaericaexon
TCONS_00063199-exon-scaffold_384-1510915933:373695..373745TCONS_00063199-exon-scaffold_384-1510915933:373695..373745Clytia hemisphaericaexon
TCONS_00063199-exon-scaffold_384-1575043694:373695..373745TCONS_00063199-exon-scaffold_384-1575043694:373695..373745Clytia hemisphaericaexon
TCONS_00063199-exon-scaffold_384-1491911889:373915..374655TCONS_00063199-exon-scaffold_384-1491911889:373915..374655Clytia hemisphaericaexon
TCONS_00063199-exon-scaffold_384-1510915933:373915..374655TCONS_00063199-exon-scaffold_384-1510915933:373915..374655Clytia hemisphaericaexon
TCONS_00063199-exon-scaffold_384-1575043694:373915..374655TCONS_00063199-exon-scaffold_384-1575043694:373915..374655Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063199-proteinTCONS_00063199-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_384supercontigscaffold_384:349545..374655 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.26418	1.02485	0	0.596059	1.42752	1.21346	1.35887	0.982605	1.85354	0.907835	0.648713	1.66403	1.26968	1.27915	1.78975	2.1405	1.33389	1.9723	0.427157	1.14608	2.33911	1.9738	0.265314	1.4952	1.62347	2.37539	0.852788	0.230507	0.980362	0.096946
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063199 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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