|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063217 ID=TCONS_00063217|Name=TCONS_00063217|organism=Clytia hemisphaerica|type=transcript|length=942bp
AGCAAAATAGGTGttgtcttttaattttttaacttcgcattagagttagg
aaatctttttgatcgctaaatctaaaattcacttcACATTTTGCAAAGTG
TGATTGTGAAGCTATAGTTCTAACCCTGTGGTCTTTTTGCCTCCAAATAA
TCAGGTGGTAAGTCACGTGAGTTAACAAAATGACGTATCACGAAAGCCGT
CTATATGATGacataattgaaaaaaatcctatTATGTAATAAGCACAGTC
ATGTATCAATGAATTTTTGTTGTGTTCCTTCCCAGTCCTTCCAAATTGTA
CTTTTAAAAGTTGTTTATATGTTTTAAAGGTTGTTCATGAGGAATCATCA
ATGTCTTTATATAAGATGAAACATTAAAGAAATTGGTCGACAAACATTTC
TGTCCTACTCAGAGTATTTTCCAAGTACTTTTCCTAACCACCGTTTTGgt
ctgaaaaattgaatttcaatccaGTGGTATTAAATGtcccccaccatggt
tgggcaacgaAGAAAGTCTTTGCCCTCTGAACATCCCATACTTTAATCca
attaaattttgcgaaatcAAAACTAGCAAAATTTAAACTcacaaaattgt
ttgaaattgctCATTcagcgaaattaaatccacgcaaaattgtttgaaat
cgcattcaaattcaattcaatcaaaacaaaagttaaagaGACGCAATGAA
GTCGCAACATTTTGAAGGTAAAGGCAGCGCGCTGGCCAAtggaaaaaaga
gttttttatcaaagttttgaaactgcacttttaaagttaaaaatttgtgc
gcaaaggtgaaagcaagtgaaattgcatgctttcagtggagtttgtggac
gaaatcagaaagaattTGGTTGAAAGGATTTTTGtcccaaaacttgtttt
ttttatcggtatgtagTTGGACTGCCCCATCCCCTaatcggc Run BLAST on NCBI transcript from alignment at scaffold_384:117740..118681 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063217 ID=TCONS_00063217|Name=TCONS_00063217|organism=Clytia hemisphaerica|type=transcript|length=942bp|location=Sequence derived from alignment at scaffold_384:117740..118681 (Clytia hemisphaerica)
gccgattAGGGGATGGGGCAGTCCAActacataccgataaaaaaaacaag
ttttgggaCAAAAATCCTTTCAACCAaattctttctgatttcgtccacaa
actccactgaaagcatgcaatttcacttgctttcacctttgcgcacaaat
ttttaactttaaaagtgcagtttcaaaactttgataaaaaactctttttt
ccaTTGGCCAGCGCGCTGCCTTTACCTTCAAAATGTTGCGACTTCATTGC
GTCtctttaacttttgttttgattgaattgaatttgaatgcgatttcaaa
caattttgcgtggatttaatttcgctgAATGagcaatttcaaacaatttt
gtgAGTTTAAATTTTGCTAGTTTTgatttcgcaaaatttaattgGATTAA
AGTATGGGATGTTCAGAGGGCAAAGACTTTCTtcgttgcccaaccatggt
gggggaCATTTAATACCACtggattgaaattcaatttttcagacCAAAAC
GGTGGTTAGGAAAAGTACTTGGAAAATACTCTGAGTAGGACAGAAATGTT
TGTCGACCAATTTCTTTAATGTTTCATCTTATATAAAGACATTGATGATT
CCTCATGAACAACCTTTAAAACATATAAACAACTTTTAAAAGTACAATTT
GGAAGGACTGGGAAGGAACACAACAAAAATTCATTGATACATGACTGTGC
TTATTACATAataggatttttttcaattatgtCATCATATAGACGGCTTT
CGTGATACGTCATTTTGTTAACTCACGTGACTTACCACCTGATTATTTGG
AGGCAAAAAGACCACAGGGTTAGAACTATAGCTTCACAATCACACTTTGC
AAAATGTgaagtgaattttagatttagcgatcaaaaagatttcctaactc
taatgcgaagttaaaaaattaaaagacaaCACCTATTTTGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063217-exon-scaffold_384-1491911889:117740..118681 | TCONS_00063217-exon-scaffold_384-1491911889:117740..118681 | Clytia hemisphaerica | exon |
| TCONS_00063217-exon-scaffold_384-1510915933:117740..118681 | TCONS_00063217-exon-scaffold_384-1510915933:117740..118681 | Clytia hemisphaerica | exon |
| TCONS_00063217-exon-scaffold_384-1575043694:117740..118681 | TCONS_00063217-exon-scaffold_384-1575043694:117740..118681 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_384 | supercontig | scaffold_384:117740..118681 . |
Blast
The following BLAST results are available for this feature:
|
