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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063221 ID=TCONS_00063221|Name=TCONS_00063221|organism=Clytia hemisphaerica|type=transcript|length=1222bp
ATTCCATCCAACATATCATTTTCTCTCTGTTGGACAGAATGTTTGAATTG
TTTACTCGAATGCAAAAATcggaaaggaagaaaaaattggatgttgcatg
aaaaaaatatatggtggtgggacggtttgatatcttggaCGCCAATGGTA
CTTATTTATACCTCcaatatctattttgtcttgttcttgttgTCCCTCTT
TCGTATCTACCTCTGATTCCACAATTCCATATATAAAAAtgtttacaccc
ctgtctcacagccccagtggaactttttttctcaatggggataacaaatt
ttattgaaatcccaatgataatagaaattattttcttcaaaagttaaaaa
atccagtgggggtggttttggagtgcaatttttaaacatcatTTCGAGTG
CAATGgtgcaaaattgattcgaatcaattctGCTGCATTTTCCCatggac
aaaatcagcgtgtcttttgggtatttccctcactttttgtcccatgaaac
aaaaaaagaaacaacgAGACACCAAAAAGAGTGAcacacgcacttttttc
ttgtgttagtgggatggagcatgttgcattgcaccaacgtgaaaaaaact
tcCCATGTCCCCAAGCATTTAGTTATTCTAgcgtatgttttttctgatgt
ttctTTCTATGTATTTTAttgtttgctttatttctttttttataatctgC
CTAGTTTTTATTTCCAAATCAGCCATCTTATTGGGTAAGCTGCTTTCGAT
ATCGTTCTTAAGGCTACGGTTCTTGGCTAGCAGGTTTTTTTAATGACGTC
GTTTTTCTTCTCAATCTCCCTCATGCAACATGTGATACGAGTTCTCACCG
ATTTTACTCGTTAGAGATCGTGCTATCATCGTTATAAGTGTTGGCAAAAG
CGGTAAAGCGGTAATTGTGTTTACTCGTAGTGTACTATGCAGTGGCAGTT
TCGGCATTTTAGCCGGTTTTGGTCATCGTCATTTGAGCAGGAGGTGAGAg
tgcattttttgttttgtttagcttcttcaaatggttgttttagttgcttt
ttgttggtattttcgttcatgtttttgatttagctaaatttttaaattat
ttttgaagagCTACACATCGTACCACATGACATGTCAAAGAGAAACTTGA
GGCTACGGCACATCATCTTGCACTCTGAGCGTAAAAAAACTCCAACTATG
CAGGATATGTGCATCGGACATT Run BLAST on NCBI transcript from alignment at scaffold_384:157631..158852 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063221 ID=TCONS_00063221|Name=TCONS_00063221|organism=Clytia hemisphaerica|type=transcript|length=1222bp|location=Sequence derived from alignment at scaffold_384:157631..158852 (Clytia hemisphaerica)
AATGTCCGATGCACATATCCTGCATAGTTGGAGTTTTTTTACGCTCAGAG
TGCAAGATGATGTGCCGTAGCCTCAAGTTTCTCTTTGACATGTCATGTGG
TACGATGTGTAGctcttcaaaaataatttaaaaatttagctaaatcaaaa
acatgaacgaaaataccaacaaaaagcaactaaaacaaccatttgaagaa
gctaaacaaaacaaaaaatgcacTCTCACCTCCTGCTCAAATGACGATGA
CCAAAACCGGCTAAAATGCCGAAACTGCCACTGCATAGTACACTACGAGT
AAACACAATTACCGCTTTACCGCTTTTGCCAACACTTATAACGATGATAG
CACGATCTCTAACGAGTAAAATCGGTGAGAACTCGTATCACATGTTGCAT
GAGGGAGATTGAGAAGAAAAACGACGTCATTAAAAAAACCTGCTAGCCAA
GAACCGTAGCCTTAAGAACGATATCGAAAGCAGCTTACCCAATAAGATGG
CTGATTTGGAAATAAAAACTAGGcagattataaaaaaagaaataaagcaa
acaaTAAAATACATAGAAagaaacatcagaaaaaacatacgcTAGAATAA
CTAAATGCTTGGGGACATGGgaagtttttttcacgttggtgcaatgcaac
atgctccatcccactaacacaagaaaaaagtgcgtgtgTCACTCTTTTTG
GTGTCTcgttgtttctttttttgtttcatgggacaaaaagtgagggaaat
acccaaaagacacgctgattttgtccatGGGAAAATGCAGCagaattgat
tcgaatcaattttgcacCATTGCACTCGAAatgatgtttaaaaattgcac
tccaaaaccacccccactggattttttaacttttgaagaaaataatttct
attatcattgggatttcaataaaatttgttatccccattgagaaaaaaag
ttccactggggctgtgagacaggggtgtaaacaTTTTTATATATGGAATT
GTGGAATCAGAGGTAGATACGAAAGAGGGAcaacaagaacaagacaaaat
agatattgGAGGTATAAATAAGTACCATTGGCGtccaagatatcaaaccg
tcccaccaccatatatttttttcatgcaacatccaattttttcttccttt
ccgATTTTTGCATTCGAGTAAACAATTCAAACATTCTGTCCAACAGAGAG
AAAATGATATGTTGGATGGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063221-exon-scaffold_384-1491911889:157631..158852 | TCONS_00063221-exon-scaffold_384-1491911889:157631..158852 | Clytia hemisphaerica | exon |
| TCONS_00063221-exon-scaffold_384-1510915933:157631..158852 | TCONS_00063221-exon-scaffold_384-1510915933:157631..158852 | Clytia hemisphaerica | exon |
| TCONS_00063221-exon-scaffold_384-1575043694:157631..158852 | TCONS_00063221-exon-scaffold_384-1575043694:157631..158852 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_384 | supercontig | scaffold_384:157631..158852 . |
Blast
The following BLAST results are available for this feature:
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