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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063251 ID=TCONS_00063251|Name=TCONS_00063251|organism=Clytia hemisphaerica|type=transcript|length=1206bp
aaaagtttttggaaTGGCTAGTCACTAGTTGTCTAGAATTATCCAGAAAT
TAATAGATACGAATTTATAAAGGGAAAGAGCCGAAAGATGACTACAAGAA
ACTTTCTCTGGAGCACTGTTGGCTTATGTTGGATTATTTATGTTACATAA
AGACTTTAATTTTGGTAAAATGGGCAAAGATTGACGAATGGTTTTATAAA
TTTGTCTAAGAATGGACAGTGGTGTGGTGAGACACACAAATACAAATTAA
TCAAACATATCTGTATGCTGGAATGATAgtggttggattttttttaaaga
ttgttcCATGGATCAACCCTGCTTCGAACTAACTTGGAAGTACAGGAGTA
TATACTTAGGCTCCttgtttttgttaccaaaataAAGCACTATTTTTTCA
TTTCGAAAGATTTGAGTAACATTGTTTTTAATCACTTGTCAGATCGTTTC
TATCGTggacatttctatttctattcagACAGTGGACATACAGAATGCAA
AGTAGTGTATTTCATAATGAGAAATGTTAACAAGGAGAATATATGTTACG
TGGTGTGGTGGCAAGCACAATTCGAGAGGTCCACcaaataattttgatga
aatcatgAGGAAATGTGGCTGTTGGTCTACAGCtggattattttatttat
aatcgcacgatgagttatcTTTTCTTCTTTGGCGCGctttcaaagagagc
aattaatcgttaattgtatCCTGTAGAGACcaattaatcacactcttcaa
tgacgcgccaatgtttacaaaattgattttaatgtttttcttacattttt
ttatcgaacgttttaattgcattcgaaattcattttgtgagaaataaaat
ctttaagcaaacaataaaagaaaaacataaagagaagagtaAAATGTAAA
ACTTccagtgtaatttactttcctgacAGGGAAAAAAGTAGTGAACaaaa
ttgtgcgattagctcgtaatcacataataactcgtacaattcgaaaattg
cactcgtgattttgttgtttcgaattttcctcgtcctttcagactcggaa
aattaataacaaaaaaatcactcgtgcaattattctcaaattgcactcgt
tatcatgtgattacatatactaattttTAACAGAATAATCCTCGACTCGA
GATAGGAGACCTTTAAAAGAtaccttttctttttccttttgtgGATTCTA
CCGGAG Run BLAST on NCBI transcript from alignment at scaffold_385:50176..51477+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063251 ID=TCONS_00063251|Name=TCONS_00063251|organism=Clytia hemisphaerica|type=transcript|length=1302bp|location=Sequence derived from alignment at scaffold_385:50176..51477+ (Clytia hemisphaerica)
aaaagtttttggaaTGGCTAGTCACTAGTTGTCTAGAATTATCCAGAAAT
TAATAGATACGAATTTATAAAGGGAAAGAGCCGAAAGATGACTACAAGAA
ACTTTCTCTGGAGCACTGTTGGCTTATGTTGGATTATTTATGTTACATAA
AGACTTTAATTTTGGTAAAATGGGCAAAGATTGACGAATGGTTTTATAAA
TTTGTCTAAGAATGGACAGTGGTGTGGTGAGACACACAAATACAAATTAA
TCAAACATATCTGTATGCTGGAATGATAgtggttggattttttttaaaga
ttgttcCATGGATCAACCCTGCTTCGAACTAACTTGGAAGTACAGGAGTA
TATACTTAGGCTCCttgtttttgttaccaaaataAAGCACTATTTTTTCA
TTTCGAAAGATTTGAGTAACATTGTTTTTAATNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCATTTC
GAAAGATTTGAGTAACATTGTTTTTAATCACTTGTCAGATCGTTTCTATC
GTggacatttctatttctattcagACAGTGGACATACAGAATGCAAAGTA
GTGTATTTCATAATGAGAAATGTTAACAAGGAGAATATATGTTACGTGGT
GTGGTGGCAAGCACAATTCGAGAGGTCCACcaaataattttgatgaaatc
atgAGGAAATGTGGCTGTTGGTCTACAGCtggattattttatttataatc
gcacgatgagttatcTTTTCTTCTTTGGCGCGctttcaaagagagcaatt
aatcgttaattgtatCCTGTAGAGACcaattaatcacactcttcaatgac
gcgccaatgtttacaaaattgattttaatgtttttcttacatttttttat
cgaacgttttaattgcattcgaaattcattttgtgagaaataaaatcttt
aagcaaacaataaaagaaaaacataaagagaagagtaAAATGTAAAACTT
ccagtgtaatttactttcctgacAGGGAAAAAAGTAGTGAACaaaattgt
gcgattagctcgtaatcacataataactcgtacaattcgaaaattgcact
cgtgattttgttgtttcgaattttcctcgtcctttcagactcggaaaatt
aataacaaaaaaatcactcgtgcaattattctcaaattgcactcgttatc
atgtgattacatatactaattttTAACAGAATAATCCTCGACTCGAGATA
GGAGACCTTTAAAAGAtaccttttctttttccttttgtgGATTCTACCGG
AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063251-exon-scaffold_385-1491911889:50176..50595 | TCONS_00063251-exon-scaffold_385-1491911889:50176..50595 | Clytia hemisphaerica | exon |
| TCONS_00063251-exon-scaffold_385-1510915933:50176..50595 | TCONS_00063251-exon-scaffold_385-1510915933:50176..50595 | Clytia hemisphaerica | exon |
| TCONS_00063251-exon-scaffold_385-1575043694:50176..50595 | TCONS_00063251-exon-scaffold_385-1575043694:50176..50595 | Clytia hemisphaerica | exon |
| TCONS_00063251-exon-scaffold_385-1491911889:50692..51477 | TCONS_00063251-exon-scaffold_385-1491911889:50692..51477 | Clytia hemisphaerica | exon |
| TCONS_00063251-exon-scaffold_385-1510915933:50692..51477 | TCONS_00063251-exon-scaffold_385-1510915933:50692..51477 | Clytia hemisphaerica | exon |
| TCONS_00063251-exon-scaffold_385-1575043694:50692..51477 | TCONS_00063251-exon-scaffold_385-1575043694:50692..51477 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_385 | supercontig | scaffold_385:50176..51477 + |
Blast
The following BLAST results are available for this feature:
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