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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063292 ID=TCONS_00063292|Name=TCONS_00063292|organism=Clytia hemisphaerica|type=transcript|length=220bp
tTAACATTAACATCAATACCTAATTAAGAAGAAAAtctcacaaaaataaa
aagatgaaGTGCAGCGACATTTTGTATCCACCTGGATCATCAAGGTTAAA
CCCAACAGTTGCCACCTCTTTGTTTCTCATACTGTTTTCAACACAAATTA
CGCTGACTGCACCATTCTCTTATTTACCAGCAATGGTTTTGtcCTTTGGA
TACTCAGACAGACAACGAGG Run BLAST on NCBI transcript from alignment at scaffold_385:447878..449435- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063292 ID=TCONS_00063292|Name=TCONS_00063292|organism=Clytia hemisphaerica|type=transcript|length=1558bp|location=Sequence derived from alignment at scaffold_385:447878..449435- (Clytia hemisphaerica)
TTAACATTAACATCAATACCTAATTAAGAAGAAAATCTCACAAAAATAAA
AAGATGAAGTGCAGCGACATTTTGTATCCACCTGGATCATCAAGGTTAAA
CCCAACAGTTGCCACCTCTTTGTTTCTCATACTGGTAAGTTTTTCGCCGT
TCATTGTTGTTAGCGAGTTTATATATTTGCACTTTTGAGGATTCATGATT
TGGTATAACCCGCAGTTTTTGACTGATGAATTCGAGGACAGTAAAGGTGC
TGATTTACCGTTGTCCTCAGTCAATTAGGATCTAGTCAAATCGGAAGATA
ACCGTCTCCATCAAAGAAAAATACACATTCATAAACTAAGTATTTAGACT
GAGACCGCAGTCGGAAGCGACCCAAAAGCTCGTCTTTCGATAGCTATCTC
CCGGTGGTACAGGGGAGGGCGCAACTCTTTCACCCTGGATCACCTCACTT
TGAAAATTGAAAGCTAGATCCGTTTAAGTCAGATTACCCTGGTGACTTAC
AATTCAAATCTATTATAGTTGAATCTCGTTAAGTATTCCAACGGATAAGT
CGTACGCGCATAAAGTAATAGTCCCACTTTTCTTCGCTCCCGCCCTAGAG
CTAACTTACCCTTTAGTGCTACTGGACTACATTATATCTACCAGTCCTAT
GTATTATTTTATTCTAGTTTTCAACACAAATTACGCTGACTGCACCATTC
TCTTATTTACCAGCAATGGTTTTGGTAAGTCATTACTTTGACTAGCAAAT
TAGTATTTTTTTAATGGAAGATAACTTTTATAATATTACAATGTTAACTA
ACCGTCATNGTCGATTTTTAATGTCGTAATAAAACCTCTACAACCCATGA
TAAATTTCTTTGACTAGTAAATTAGTATGTTAACGTCAGGTGGTGGGACC
ATAAGGGTGGCGGGCGTTTGCTTAAATAAGAACTGCGTAGGAGGACGAGA
AAAACTTAACGAGAAGGTACTGATTAACAGCTTTTTAGCCCCTACTGACG
TGCCAGCGTAATCATTTCTTTACCGAATCTAATATTAAACTCAATCATAT
AATGGTTAACCAAAGAAAAAAAATGAGATCTCTTAATTTTGATTGAATCG
AAGCAAAAGATCAATCGAAACTGATTGGAATTCGACCGAAGTCCATTATT
AAACTCCGGTTAAGGAGTTTCTTAAATTCAGTGTTTTTTATTTGTAATTG
TGCGTAAATCCGATCAATTGCGATAGCCAGGTTCGTTTTCCCGATCTATC
CGGTTTGATTTCTCAATTTTGTTTGCGGTTTGGCTCGCACTTACTAGGAT
ATACTCTTTTAAATCTTATGTTAGATATATTAAGAAAGCCTGACCACGAT
AAAAATGTTTGCCATTATGCTCGCTACTCAGAAATGACAATTACCAGAGT
TTGCAGTCGTCATTACGGCTGTTTTATTTATCCATCAATTCGAATTTAGA
ATTTCTTTGATTGTACGGCTCAATTATTCGATTCAGTCCAATCACACCAC
TGAATAACTGCATTTCTTTCAATTTTTAGTCCTTTGGATACTCAGACAGA
CAACGAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063292-exon-scaffold_385-1575043694:449302..449435 | TCONS_00063292-exon-scaffold_385-1575043694:449302..449435 | Clytia hemisphaerica | exon |
| TCONS_00063292-exon-scaffold_385-1575043694:448712..448768 | TCONS_00063292-exon-scaffold_385-1575043694:448712..448768 | Clytia hemisphaerica | exon |
| TCONS_00063292-exon-scaffold_385-1575043694:447878..447906 | TCONS_00063292-exon-scaffold_385-1575043694:447878..447906 | Clytia hemisphaerica | exon |
| TCONS_00063292-exon-scaffold_385-1510915933:449302..449435 | TCONS_00063292-exon-scaffold_385-1510915933:449302..449435 | Clytia hemisphaerica | exon |
| TCONS_00063292-exon-scaffold_385-1510915933:448712..448768 | TCONS_00063292-exon-scaffold_385-1510915933:448712..448768 | Clytia hemisphaerica | exon |
| TCONS_00063292-exon-scaffold_385-1510915933:447878..447906 | TCONS_00063292-exon-scaffold_385-1510915933:447878..447906 | Clytia hemisphaerica | exon |
| TCONS_00063292-exon-scaffold_385-1491911889:449302..449435 | TCONS_00063292-exon-scaffold_385-1491911889:449302..449435 | Clytia hemisphaerica | exon |
| TCONS_00063292-exon-scaffold_385-1491911889:448712..448768 | TCONS_00063292-exon-scaffold_385-1491911889:448712..448768 | Clytia hemisphaerica | exon |
| TCONS_00063292-exon-scaffold_385-1491911889:447878..447906 | TCONS_00063292-exon-scaffold_385-1491911889:447878..447906 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_385 | supercontig | scaffold_385:447878..449435 - |
Blast
The following BLAST results are available for this feature:
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