TCONS_00063313 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063313
Unique NameTCONS_00063313
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1910

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063313 ID=TCONS_00063313|Name=TCONS_00063313|organism=Clytia hemisphaerica|type=transcript|length=1910bp
ATAAATTCGAAGAAAAGCTAATAAGAATGGAATGGGGAGAAGGAATCAAG
CTCATCAATATTGAATGAAAAGACAAAAACCGAATGTGTTTTGAATTATT
GAGAAGAATATCGTGAGGAGGAAGAAAGGCAAAAAACGTAAGTTGTAATC
CTACCTGTCTAGATTTTATATTGGAagttctttttcctttttcctaTATT
ATtgtcttaaaatcttttaaggAATAaggaaggttggaatttttgaaaac
agaTTTTATGTACTGTAATAGGACCTTATCTTTTTTAGATACtagttcaa
aaaatatttggagCAACAATGCCAGAGAAATTATTCCCAATCGTCGACAT
CTCATATCTCTCAAACAACTTTGAAGATTCTGCACAATGGAAGGATAATA
TCCAATTTCAAAATGACTTGAAAATCAAACAACTGGCACAAGAATTACGG
GCTGGTTTTGAAACGTGGGGATTCTTGTACATCAAAGGACACAACATACC
TGACAATCTCGTCAACAATGTTTTTGGAAAATCCAAAACCTTCTTTGATC
GCCCGTACGATCATAAATCGAAATATCCACGTGGCGAGGGGATTGGTGAA
GGATGGTTGGGACCTGAGAACGAAGTATTCGATTCCAGTCTCCCACGTGA
CATGAAAGAAGCATTTGATTTTCGACCTAATACAGAAATCCCGGATAAAT
TATCCAAAGATATGCCAAATTTAGTTGGTGGTATGACAGAACTTTTTGAT
CACTGTACGgaactttcattgaaatttttacgCCTTTTAGCTGTAGCGCT
AGACATTGATACTGAGAAATATGCTGCCAGTCACTCTAACATGGGACGTT
GTGAGAAGAATGGTACGTCGTTACGCTCGTTGTACTACCCGGCCATTAAA
GATACGGTAATCACGGATAAGGACCGTAGATGTCGGGAACATACTGATTA
TGGAACCATCACGCTTTTGTTTCAAGATGAAGTTGGTGGGTTAGAGGTCC
TATCACCAACGGGTGAATTTGTCAAAGCTGTTCCAATTCCTGGTTCAATT
GTCATCAACGCTGGAGACATGTTAAAAGATTGGTCACATGGGCAATACAA
AGCTACCATACATCGCGTTGTCACGCCAACAGATCAAAACAAATGCACCA
TTGCTAGGCAATCAATGGCATTCTTctgccatccaaatttcgatATTGAT
ATTGGTGAAAATGAAGagaaaattaatgtttttgatCACATATCGAAACG
ATTCAATGAGACTATTATACCGACAAATTGATAGTCCAATACTATTTTGC
TGACTCGAAAAATAGTCGCGCCCAGATTTAAAAGAAGCAGTTTTTTTGGC
AGATAGGGCCTTTTCATAGTCGTAAAAGATTATGTGACATTGAGATCATT
GATGCGTTGAGAACTTttagggaccattcaaaaagtacgtacgcttaAAA
TCGGTGTAAATTGACCACCCTCTCCCCCCTCGTACGCTCTCGTACGCTTT
GgcattacccccccccctttcgcGTCATAGTTTCGGATCAAACGAAACCT
TTATCTAATGGCGAAGTATGATCATTATGGTtactgtaaaatatttttga
ctggGATTTCTAgctaaaaaataaaaggaaattttgaatGGGAGAATGCT
GCGCTGAATCGAGGAGCCCTTAATATATTTATTGAGAACAATATATATtg
gtaaatttatttttttataagaataagttaagaggATTAACATTAATTTA
ATTGTATATTAAGTAAAAGTATAACTTTAagataatttattttcaatata
gaAGTTCTCTCTTTTTTGCAAGACGTCGGTGCTTCGGCAGGTTCTCTGGT
GTTGACAATGGTCCTAATCAGAgataaattaatcaatttttataTGTAAC
ttctctcggg
Run BLAST on NCBI

protein sequence of TCONS_00063313-protein

>TCONS_00063313-protein ID=TCONS_00063313-protein|Name=TCONS_00063313-protein|organism=Clytia hemisphaerica|type=polypeptide|length=320bp
MPEKLFPIVDISYLSNNFEDSAQWKDNIQFQNDLKIKQLAQELRAGFETW
GFLYIKGHNIPDNLVNNVFGKSKTFFDRPYDHKSKYPRGEGIGEGWLGPE
NEVFDSSLPRDMKEAFDFRPNTEIPDKLSKDMPNLVGGMTELFDHCTELS
LKFLRLLAVALDIDTEKYAASHSNMGRCEKNGTSLRSLYYPAIKDTVITD
KDRRCREHTDYGTITLLFQDEVGGLEVLSPTGEFVKAVPIPGSIVINAGD
MLKDWSHGQYKATIHRVVTPTDQNKCTIARQSMAFFCHPNFDIDIGENEE
KINVFDHISKRFNETIIPTN
Run BLAST on NCBI

transcript from alignment at scaffold_385:535343..546210-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063313 ID=TCONS_00063313|Name=TCONS_00063313|organism=Clytia hemisphaerica|type=transcript|length=10868bp|location=Sequence derived from alignment at scaffold_385:535343..546210- (Clytia hemisphaerica)
ATAAATTCGAAGAAAAGCTAATAAGAATGGAATGGGGAGAAGGAATCAAG CTCATCAATATTGAATGAAAAGACAAAAACCGAATGTGTTTTGAATTATT GAGAAGAATATCGTGAGGAGGAAGAAAGGCAAAAAACGTAAGTTGTAATC CTACCTGTCTAGATTTTATATTGGAAGTTCTTTTTCCTTTTTCCTATATT ATTGTCTTAAAATCTTTTAAGGAATAAGGAAGGTTGGAATTTTTGAAAAC AGATTTTATGTACTGTAATAGGACCTTATCTTTTTTAGGTGTGTAGTTTT TTAAGATATCTTTTTTGTTTTGGTTTTGCTTAATTTCCTCTCTGTTATGT AACTATTTTTTCCTAAGCTTTTGCTCCGTTACTGTGTATTACCCTACGGT TTAACATTGTTTTCCTTTTGTGAAAAATCCCCTTTCGATTCTTTTCTCGA TGAGCCTGAATGGGCTCTATGCTCTTTTTCTTTTATCTTATGTATTTTTT TCACTGAAAATCAATTTTTCTCGTAAAATTTTATAAAATGAGTTGGATGA TGAGTGGCCAGAACTGGTAGTAATTGAGCTATGATGAACATGTTTTAAAA TTTTTTCGTCGGACATAATGTTTTGGTTAAACGCTTTAAAATTGGATACC TCAAAACAGTTTTAACATTGTCAATTACCGTCAACTGCTCTAACTTGGGA CTATCTGACAAAACATGGGACGGCAATTCGGACACCATTTCAGTGAACCT CCAAAGTCATTTGATTTGAGAAAATTAACGGCGCATTAAAAAGTACACAA TTTCTCTTTCGCACCGAGTAGGCTTTTAAAAAATCCGTAGTGTGACGCGC GAGTGTCTGTGCACTCTAAGAGGAACGAAGAAGTATGATTGATAAACTTG AAAAGGTGGAGTTTTTATCAAAAAAAATTTGTTGTCAAAAAGATTTAACA GTAAGTGAAAATACTGGCCAGATATCAACCAGTCCCATGTTTCGACCAAT CGTACCAAGTTANGTCAAAGAGATTTAACAGTAAGTGAAAATACTGGCCA GATATCAACCAGTCCCATGTTTCGACCAATCGTACCAAGTTAGAGTTGAC GGTATTGTTTTGAAGTTTTTTCAAGTCAACAAGATATTGAAATTAGGAGG AGGTTGGATCATTTATAGCCGAAAGGATTGTGTACGTTTTGGTTCTCCCT TCGCTTTACTGTATTTGGGCAAAAAATCGATGAGAACAATTTAAGAACAC GATTTTATCCTAAAATGAGAACAGGATGAGAATTTGAGGCTGACATTGTC AAAAAGATTGAGAAAAGTCAGATCTCACCAAAAATAAACTGGTTCTTATA AAAAAAGTGTATTTTACGTGTTCACGAGTTCTTGGAATGGCTAAAAAGTT CTCATTGCTATTAAGATGATCAAATTATCAATAATTTCATCATTAATTAT TTTTCCAAAGAAAACTAATAATCACTAATAGTTTGGTTCTGTCGCGAGGG ATCAATAATTTTCTCTGAATTAGAGAAATCAAATTTCCAGCGTGTGAAAA GTTTTTTTTAAATATAATACAGTGATTTGCTCTCATCTTTCTTGCAAAAA AGTTAAGTTACATCACTTTGAATATTCATTGCTTCATATTCAATACTTCA ATTTTTCGTATACCGAGTGAATGAAACTTGTTGTAAGCAGTACGATACAT CGAAAACATAAGCACGCCTTTTTTAAGGCAGTTATTTTCTTCGCTGTTGA CAGTTTTCCAAATGAGAATTAGATTTATAAACACATTCATGTGTGAAAAC GAGACTGATGTTTCTTCTAGATCGATTTACAGTAACTGAAAAAACTTAGT CAAGTATTTCAAACTATGTGGTACACGTTTTTTTTATAAGAACATCCAAA GTTTTAACTTTAGTTTTATGTTTAACTTTTTGAGCTTTAAGCCTAAAAGT GTTCTTAACATGTTCTTATTTTGACCATTTTTTTGAGTATTTTTGACCAT TTTCCTAAGAAATAGGGTGATTTTGAGTCCACAAAGCCCTAAAATGTTCT AAACTTTTTTTTAACATTTTTGCCATCGAAGCATTGTGTTCTTATATACT TTGTTCTTATAAAAAAACGTGTAGGTAATCTCTCATGTATTCAAAATAAA CATAAATGTGAATTGAAACAGAATTGTTCTTTCTCACAGGATGTCATATC CTAACTTATTTTAAAATCATTTTTCACTGTCACAATATTTTGATGATGTT CAAACTATAGCAGGTATGTTTCAAAGTCCACTAAGATGTAACTTCACTCA ATTCTCTTCAAGGAGAGTGGCTCGATAATCATTTGTGAAGATTTAGCCAT TTTATGTGGGTATACGAAAGAGGCTTTCAGATTGAAGTACGACGACAAGA TGATGTTAGAATCAAATAGAAATCAATTGAAATAGGATATATTTCTTTAA GCTTACAGGAATGTCCTAAAATTATGCTTACCAAAGTAAATCTGGTTCGA AATTCCTGAAATTCAAGGCTTGACGTGTTATCAAAGTTGTTTTAAGTCTT GTTTGTGCACAATTTGTTTTATAAGAACATCCAAATTTTTTGAAGCCTTT AGATGTTCTTAACGCTTTTTAAAATTGCCCAGTAACGTTCTTAAAATTTT CTTATTCTCGCCATTTTGTGAGTATTTTTGTCTATTTTCCTAGGAAATTG GGTCTTTCAGAGGCCGCAGAGCTTTAAAATATTCTTAACTTGTTCTTTTG GTGATGAAGCCTCATGTTCTTACATAGTTTGTTCTTATAAAAGAACACGT AGCCTTCTTTAGCATTCCACGATATTAAGGAATTTCAAATTTCATCTACC TCTGCTGTGTAGAATGTGCAATAGGAGTAAATTGTTCAATATGATACCTA ATGGCTTCCCCCTGTCGAACCGGAAGTGAGCGTTGGTTTAGTCACAATTC TAATCAAAGATTCTCTTTTTACCTCGCCCACTAGCATTCGCTTTGTAAAA TTTAACCTCTTTTTTTTCCTAAACGAGTGCAATGTTGTCTCCCGAAATAT GTTATTCCTCCACTTCAAGCTTTAGATAGGCTGGCTAGAATTTGATATTC TCTGTTTCATTGTTTCTTTCTTCGAGATACTTTAGGAAAAAGTACAGTTT CTCCGCAACTTCAGTTGAGCTAAACTGTCTTTTTTTCTGTATGCCAGTCT GTCTGTCTGATATTCAACTATTTGGAGGCAACCTCGAGACTTCAAATTTG TTCCTTGGGCGAATGTACCTCTAAGAGTGTTTTTTAAGTTTTTTATTATT TAGGGGTTTGGACAACTAAAACGAGGCTTGAACCATTTGGAAGCCTGGTA GGCTGAAAATGGTCAGGCACATTTGTATTTAGTGCTATCTTTTTTTTCTT TTCGTCAAAAAGTTTTTTGGGCTTAGACTGGAGACAAGCTGCTACATCGA TACACGTTTTTTCTTTTATTAGAACCCAGTTTATAAGAACATTGAGGCTG AAATTCGTCGAAAAATTAAGAACATCGTAAGAACATGCCCAGCCTCAAAA AAAAAATGAGAAGAAACTACAATTTTATCCTCTTTTCAAGCAGTTTTAAA CAGACTTAGGAATGGATTTTCTAAATCGAGAGTCAAATATTGTCCAAATT TTACCAATTTTAAGTTCTCTTTATTTTGCACGATATTGTCGATTTAGAGT AGTCTGAAAATTTAAAAACGCATCTAAGAACATTTCAGGCTGAAAATTGC TAAAAAAATAAGCACATCCAGGCTCAGCCAAATTTTAGGTGTTCTAATAA AAAAAAAACGTGTACATAGGATAGGCCCAGCTTTAAGCTTTCTCCAGCAA AAAAAAAAGTGAAGCAAAAATTTGACTTTTTAAATGTCGTGCCGATGGAN TATGATACGCTAATCACATAAAGATTGTGACTGAATAGTAACGAATTGAA GTAGCCTGGTAGACTCAAAGATCGTCCGATTTGCTGAAATTCAGCACACT CATTCTTTGCGATAATACGTTGGGGTCTTATTTTTGGGCCTGAGCTTTGG GCGAATTTTAGCTGCTACGTCTGCTACGCTAAATACATAAATTTTGTAGC TGAATACAGTAGTTACGAATTGAAGTTGTCGGAAATAGGAAAATCTCATT GTGTTATGTCACTTAACCACTGATAAAATGACGTAATTGTCAAAACACGA TACCGTGCATTGCATAAACATGCTCTTAAAGCATGATCATTTTTATGTTT CTGCTGTAGTAAATGGTTTTCAAAATGGTGGTTAACCTTTATTTTACGTT GTCTATTTATTGTTATAAAGGTAATGGTAGTATGCAGGTAGGTTGAATTC GAGTAGAGAGCAAATTTGTATTTAGCTTTTGAAGACATCACGCTAGGATA TGTTAGAAGAGTGTACACATTTTTTATATGAATAAACTATATAAGAACAT TTTAAGACTTTATGGACTCAAAAACACTCGATTTCTTAGGAAAATGGATA AAAAATGGTAAAACATTCGTGAAAATAAGAACATTTTAAGAACATTTTTC GGCTCGAAACCCAAAAAATTAAGTACATCCGAAGGCTTTAAAAATTTTGA ATGTTCTTATAAAAAAAAACGTGTAGTGGGCGATAGGTGAAAAAGGACGA GCTGGCATGGTTTGTATTGTGTTTTGTGGAAAGACTGTATGAATATTTTA AATCTTTTTGCTGGGAGAGTTGTTTAGATCATTTGAGATATGAGAGAACC ATTGAGTTTCAAGCCCGAATGGCTAGAGGTCAATCTCCTTGGTAGGATTT GAAGCCAACAAATCCTACCAAAGTTGCGCGGCCTTGAGCGACCCGCCTGG TTTTTACACAAATGACAGATTGANNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTTCAA TTTTTCTTGCCTGAGAAAGGTTAGAGATTGACCTCTAGCCCTTCGGGCTT GAAACTCAATGGATAGAACAGGTGTTATAATGTTGGTACTTAACTGACTC CTAGATTGTCAGTCAGGCCAATGAGTTTAAGATCGAATGGCTAGAATAGA ATCTCTTTAACTTTACCATATATTGAATGTTGGGTTTGCTTTGTTTTGGT GTGATACCTTTGGCTGTTCCATGAAATATTATACAGAGGAGGTGAACAAA GCCAAAAGAAAAACTCAAAAAGTGCGGGTACCCCCTGTATATTCGCAAAA TTCTCAAAAATTCTTAGAAAACTCTTTTCTTGTCTTAAAAATGTGAGTGG ACAAACGAGAATCAGTCTTTTACCCTCCCTCCCCCTGGAAACTTTAGAAT AACTTTTTACTCCATTGGAAAATGAAAAAACACATCATTAGACCTCTTGG AAATTCTTCGCGGTATACCCCCTGGAAATGTCTGTCCACCTCCTTGTATG GACATAAAATGGAATGGCTCATTTTTGGACCTACCTAAGGTAGTCCTTTA AATTAACCCTTGTCCGTTCGTTCGTTCGTTCGTTCGTTCGTCCGTTCGTT CGTCTGTTGCCAGCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNGCGTGTTGGCATTTCGTTGGCATTTGAAATGC CATTTTGAGCAAAGGAATCCCCTTTTCTGGCATTTCAAATCAAACAAAGG AACCAAAACAAAGAGAAAAAACGACATTTTTGATTTTTTAAAGTATTTGC ACGTTTTTTATTCAGTTCTTTCTATAGATTGTAAAATTTGCAAGATTTGC CATAGCCTAGACCTACGGCAAAAAGTTTCAGTCTTAATGACTGCAGTTTT TGGGAAATGCCATGCTTTTCATTGTTTGATCTGTCAAAATTGAACTTGAG GGAATCACCTTTTCAGTAATGACTCTAAAAAGACGATTCCTTAAATGCCA TGACAGAAAATACAATGGAAAAGCTATTAAAATCGGATCCCTCATGAGCA AATGCCAAATTACAAATGCCAGTTGGTCTAAACGCAGCCAAAATTGATTT TACTCTCCTTCCCTCTTCCCCCATCAACAATCAATGATAAAATTTAATGT TTTATGCATTTTCGCAAAACGGTATATCGTCTGACTGATTGTTTTAATTT TTCTCCTTATTGCCTTATTACCTAGCTTTCATCATCAGGTAGGTCCATTC AGCATGTTACTTGTTCGAAATTGATTTTTGATCCAGTAAATACAGATTAT TTTATAGCTATTCCGGGCTTGCACTCCATTGAGAAAGCCCTTATACTCTT AAAACCCTTATAACCCCTATAAATATTTTTCTAACGTAACACATACTATT TTTGGGAGGCAAGTTGGATCATGAAGTTTTGGAACTCTATTTTGACTCAT TTAAGGTGGTCGTGCATAGGAAAACGAAAAGAAAAATCAAAGGGAAACTA TTAGTTTCAGTTACCATATATCCACTTCAACATTGTTTACTGTTTCGTTG CTTGCTAATTTTGTGGTTTTGCTTGAATTGAAATTGGTCATTGTTGTCAC TGTTGTTTCTTGATAGTATTGAATTTCGCTTCCATAGGCATAAGTTTCAA ATTACATGAGGTTGCCTCTGAAATTTAAGGGACTATACAATTTGATATTT AATTTCGAAGAATGTTCTAGAGTTTGGTGTCTAATTAAAACGAAAGTGTT TCGTATGTGAAAGTTAAAGAATAAAAACCTTAGTGACGCGGGTTCTAGTT GAACTAAAAAAGGAATGAAATTTGTTTTTTGGAGAATTTACTAGAATAAG GATGGTGAATACGTCTGGATTAAAAATATGATAAATCGAATGGAGAATAA GACCATGTTCAGACGTTACGGTTCCGTATCGTTCTAAAACGAAACGGTTC CGAAACAAGTGTGAACGCCAAAATTCTAAACGTCAAAAAAGAAGACGTTA CAAAGCAAAACAGATCGAAACAGCTTCGCTCTACTATTTTCATCGGAACG GAACTGCTCCGTTTTCTTGCTTCGAAACGTTACGAAACCAATATGAACAC TCTCGATCCGTAACGGAAACCATACCCGAGCGACACGAAACCGTAGCGTC TGAACATGGTCTAAGTCAGCATTATTGTTTTATTTTTAAGTGCCAAGCTG TTATAGAATTTTCGCGTGGATCAAAAACCATTACATAGCATTCTAACTTG CTGACTCATTTACCAGTCTTCTTAAATATCACAAGAGAAATTAGAATTCT TACTGGTCCCTGTAAAGTTGTGTTTGTAAAATTGACTTGGAATGACTCTT ATATCTCATAGAATCGGTATACATTTTTTAATGGAACTTAGTTCTTTAGT GTTGGACATATGGTTTAAGATGTAATTGGGGTTTAAATTGCGAGACAAAT ACACTACAGTATTAACCCTTGTACACCAAAAATGCATGACGGGGATTGGG TACTAGTTTACAAGAAAGAATTTTCGGGAAATTACATTGAGCCACTCAAA CGCACTTTAGTGGGGGTAAATCACTTTCACTCTACTTTTTTCCAGATAAG ATGGTATTTGACTCAATTCTGCCCTGGGAAACTCGAATCTATTTCCTCTG CGGTTTTTGTTTGTATTGGAAGATAGTTTTAAGTTTTATATCCACTTTCT TGCCTCTACTTAAACTACGCTGTAAAATATTCTTTATTGTAGATACTAGT TCAAAAAATATTTGGAGCAACAATGCCAGAGAAATTATTCCCAATCGTCG ACATCTCATATCTCTCAAACAACTTTGAAGATTCTGCACAATGGAAGGAT AATATCCAATTTCAAAATGACTTGAAAATCAAACAACTGGCACAAGAATT ACGGGCTGGTTTTGAAACGTGGGGATTCTTGTACATCAAAGGACACAACA TACCTGACAATCTCGTCAACAATGTTTTTGGAAAATCCAAAACCTTCTTT GATCGCCCGTACGATCATAAATCGAAATATCCACGTGGCGAGGGGATTGG TGAAGGATGGTTGGGACCTGAGAACGAAGTATTCGATTCCAGTCTCCCAC GTGACATGAAAGAAGCATTTGATTTTCGACCTAATACAGAAATCCCGGAT AAATTATCCAAAGATATGCCAAATTTAGTTGGTGGTATGACAGAACTTTT TGATCACTGTACGGAACTTTCATTGAAATTTTTACGCCTTTTAGCTGTAG CGCTAGACATTGATACTGAGAAATATGCTGCCAGTCACTCTAACATGGGA CGTTGTGAGAAGAATGGTACGTCGTTACGCTCGTTGTACTACCCGGCCAT TAAAGATACGGTAATCACGGATAAGGACCGTAGATGTCGGGAACATACTG ATTATGGAACCATCACGCTTTTGTTTCAAGATGAAGTTGGTGGGTTAGAG GTATAACTTTTTTATCGTTCGTTCGTTCGTTCGTTCGTTCGATCGTTCGT TCGTTCGTTCGTTCGTTCGATCGTTCGTTCGTTCGTTCGTTCGTTCGATC GTTCGTTCGTTCGTTCGTTCGTTCGATCGTTCGTTCGTTCGTTCGTTCGT TCGATCGTTCGTTCGTTCGTTCGTTCGTTCGATCGTTCGTTCGTTCGTTC GTTCGTTCGATCGTTCGTTCGTTCGTTCGTTCGTTCGATCGTTCGTTCGT TCGTTCGTTCGTTCGATCGTTCGTTCGTTCGTTCGTTCGTTCGATCGTTC GTTCGTTCGTTCGTTCGTTCGATCGTTCGTTCGTTCGTTCGTTCGTTCGA TCGTTCGTTCGTTCGTTCGTTCGTTCGATCGTTCGTTCGTTCGTTCGTTC GTTCGATCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGT TCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTTTTTAATCT TCCATGACTGGCAATTTTAGATAAATTCTGCACTATGCATGATGTTTGAA GTAATGAATTTCTAGTTATAAAGCTTGCTTATAGTTCTACGTTTTTTTTC GTAGGTCCTATCACCAACGGGTGAATTTGTCAAAGCTGTTCCAATTCCTG GTTCAATTGTCATCAACGCTGGAGACATGTTAAAAGATTGGTCACATGGG CAATACAAAGCTACCATACATCGCGTTGTCACGCCAACAGATCAAAACAA ATGCACCATTGCTAGGCAATCAATGGCATTCTTCTGCCATCCAAATTTCG ATATTGATATTGGTGAAAATGAAGAGAAAATTAATGTTTTTGATCACATA TCGAAACGATTCAATGAGACTATTATACCGACAAATTGATAGTCCAATAC TATTTTGCTGACTCGAAAAATAGTCGCGCCCAGATTTAAAAGAAGCAGTT TTTTTGGCAGATAGGGCCTTTTCATAGTCGTAAAAGATTATGTGACATTG AGATCATTGATGCGTTGAGAACTTTTAGGGACCATTCAAAAAGTACGTAC GCTTAAAATCGGTGTAAATTGACCACCCTCTCCCCCCTCGTACGCTCTCG TACGCTTTGGCATTACCCCCCCCCCTTTCGCGTCATAGTTTCGGATCAAA CGAAACCTTTATCTAATGGCGAAGTATGATCATTATGGTTACTGTAAAAT ATTTTTGACTGGGATTTCTAGCTAAAAAATAAAAGGAAATTTTGAATGGG AGAATGCTGCGCTGAATCGAGGAGCCCTTAATATATTTATTGAGAACAAT ATATATTGGTAAATTTATTTTTTTATAAGAATAAGTTAAGAGGATTAACA TTAATTTAATTGTATATTAAGTAAAAGTATAACTTTAAGATAATTTATTT TCAATATAGAAGTTCTCTCTTTTTTGCAAGACGTCGGTGCTTCGGCAGGT TCTCTGGTGTTGACAATGGTCCTAATCAGAGATAAATTAATCAATTTTTA TATGTAACTTCTCTCGGG

Coding sequence (CDS) from alignment at scaffold_385:535343..546210-

>TCONS_00063313 ID=TCONS_00063313|Name=TCONS_00063313|organism=Clytia hemisphaerica|type=CDS|length=1926bp|location=Sequence derived from alignment at scaffold_385:535343..546210- (Clytia hemisphaerica)
GTCCTATCACCAACGGGTGAATTTGTCAAAGCTGTTCCAATTCCTGGTTC
AATTGTCATCAACGCTGGAGACATGTTAAAAGATTGGTCACATGGGCAAT
ACAAAGCTACCATACATCGCGTTGTCACGCCAACAGATCAAAACAAATGC
ACCATTGCTAGGCAATCAATGGCATTCTTCTGCCATCCAAATTTCGATAT
TGATATTGGTGAAAATGAAGAGAAAATTAATGTTTTTGATCACATATCGA
AACGATTCAATGAGACTATTATACCGACAAATTGAATGCCAGAGAAATTA
TTCCCAATCGTCGACATCTCATATCTCTCAAACAACTTTGAAGATTCTGC
ACAATGGAAGGATAATATCCAATTTCAAAATGACTTGAAAATCAAACAAC
TGGCACAAGAATTACGGGCTGGTTTTGAAACGTGGGGATTCTTGTACATC
AAAGGACACAACATACCTGACAATCTCGTCAACAATGTTTTTGGAAAATC
CAAAACCTTCTTTGATCGCCCGTACGATCATAAATCGAAATATCCACGTG
GCGAGGGGATTGGTGAAGGATGGTTGGGACCTGAGAACGAAGTATTCGAT
TCCAGTCTCCCACGTGACATGAAAGAAGCATTTGATTTTCGACCTAATAC
AGAAATCCCGGATAAATTATCCAAAGATATGCCAAATTTAGTTGGTGGTA
TGACAGAACTTTTTGATCACTGTACGGAACTTTCATTGAAATTTTTACGC
CTTTTAGCTGTAGCGCTAGACATTGATACTGAGAAATATGCTGCCAGTCA
CTCTAACATGGGACGTTGTGAGAAGAATGGTACGTCGTTACGCTCGTTGT
ACTACCCGGCCATTAAAGATACGGTAATCACGGATAAGGACCGTAGATGT
CGGGAACATACTGATTATGGAACCATCACGCTTTTGTTTCAAGATGAAGT
TGGTGGGTTAGAGGTCCTATCACCAACGGGTGAATTTGTCAAAGCTGTTC
CAATTCCTGGTTCAATTGTCATCAACGCTGGAGACATGTTAAAAGATTGG
TCACATGGGCAATACAAAGCTACCATACATCGCGTTGTCACGCCAACAGA
TCAAAACAAATGCACCATTGCTAGGCAATCAATGGCATTCTTCTGCCATC
CAAATTTCGATATTGATATTGGTGAAAATGAAGAGAAAATTAATGTTTTT
GATCACATATCGAAACGATTCAATGAGACTATTATACCGACAAATTGAAT
GCCAGAGAAATTATTCCCAATCGTCGACATCTCATATCTCTCAAACAACT
TTGAAGATTCTGCACAATGGAAGGATAATATCCAATTTCAAAATGACTTG
AAAATCAAACAACTGGCACAAGAATTACGGGCTGGTTTTGAAACGTGGGG
ATTCTTGTACATCAAAGGACACAACATACCTGACAATCTCGTCAACAATG
TTTTTGGAAAATCCAAAACCTTCTTTGATCGCCCGTACGATCATAAATCG
AAATATCCACGTGGCGAGGGGATTGGTGAAGGATGGTTGGGACCTGAGAA
CGAAGTATTCGATTCCAGTCTCCCACGTGACATGAAAGAAGCATTTGATT
TTCGACCTAATACAGAAATCCCGGATAAATTATCCAAAGATATGCCAAAT
TTAGTTGGTGGTATGACAGAACTTTTTGATCACTGTACGGAACTTTCATT
GAAATTTTTACGCCTTTTAGCTGTAGCGCTAGACATTGATACTGAGAAAT
ATGCTGCCAGTCACTCTAACATGGGACGTTGTGAGAAGAATGGTACGTCG
TTACGCTCGTTGTACTACCCGGCCATTAAAGATACGGTAATCACGGATAA
GGACCGTAGATGTCGGGAACATACTGATTATGGAACCATCACGCTTTTGT
TTCAAGATGAAGTTGGTGGGTTAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039667XLOC_039667Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063313-proteinTCONS_00063313-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063313-exon-scaffold_385-1575043694:545923..546210TCONS_00063313-exon-scaffold_385-1575043694:545923..546210Clytia hemisphaericaexon
TCONS_00063313-exon-scaffold_385-1575043694:536861..537568TCONS_00063313-exon-scaffold_385-1575043694:536861..537568Clytia hemisphaericaexon
TCONS_00063313-exon-scaffold_385-1575043694:535343..536256TCONS_00063313-exon-scaffold_385-1575043694:535343..536256Clytia hemisphaericaexon
TCONS_00063313-exon-scaffold_385-1510915933:545923..546210TCONS_00063313-exon-scaffold_385-1510915933:545923..546210Clytia hemisphaericaexon
TCONS_00063313-exon-scaffold_385-1510915933:536861..537568TCONS_00063313-exon-scaffold_385-1510915933:536861..537568Clytia hemisphaericaexon
TCONS_00063313-exon-scaffold_385-1510915933:535343..536256TCONS_00063313-exon-scaffold_385-1510915933:535343..536256Clytia hemisphaericaexon
TCONS_00063313-exon-scaffold_385-1491911889:545923..546210TCONS_00063313-exon-scaffold_385-1491911889:545923..546210Clytia hemisphaericaexon
TCONS_00063313-exon-scaffold_385-1491911889:536861..537568TCONS_00063313-exon-scaffold_385-1491911889:536861..537568Clytia hemisphaericaexon
TCONS_00063313-exon-scaffold_385-1491911889:535343..536256TCONS_00063313-exon-scaffold_385-1491911889:535343..536256Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_385supercontigscaffold_385:535343..546210 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0.381551 0 0 0 0 0 0 0 0 0 0.143742 0 0 0 0 0 1.14903 0 0 0 0 0 0 0 0 0 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR005123Oxoglu/Fe-dep_dioxygenase
IPR027443IPNS-like
IPR026992DIOX_N
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063313 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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