TCONS_00063362 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063362
Unique NameTCONS_00063362
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2761

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063362 ID=TCONS_00063362|Name=TCONS_00063362|organism=Clytia hemisphaerica|type=transcript|length=2761bp
CAATTTTGTGGAGCAGGCATGTTTACAACTAGATTAAATTTAGCATGATT
ACTCTGGAATTAAATTTAGAAGAATGCAGCCGATTTTGCGAAAGTATGAC
GTATCTGTGAATTTTGATTGGCTCTTGAATAAATTACCCAGAATCCTTTT
CCAGACCTTTCATTTTTAGCGAGGAACAGCATTTTTCTTTCACACACACG
GCAGGTCAAACTGGTGAAGACTGACAAGTCAACTTTTACTAACTCTTCAG
AGTCTTCATTATAAACGTCACTTTGTTCACTCACAACCGTTTAAAGTCAA
AAACACTGTAAAAATGTATGACTCTTTACCATCATCATTTGGTAAAAGAT
ATGACAGAGATGATAGAAGAGGTGGTGGTGGAAGAGGtgGATATGGTGGT
GGATACGGTGGTGGCAGAGGAGGCGGTAGAGGTGGCGGTGGTGGAGGAAA
ATTCAAGGATAATCAAGCAGGGGCCAGTTTGAGAAAACCAAGATGGAATA
TGGACAGTCTCCCCAGATTTGATAAAAACTTCTATAGAGAGCACCCAAAT
GTCCAAGCCCGCAGTATGGAAGCTGTAGAAGAATACCGTAAAGCAAGAGA
TATTACTGTCGCTGGACGTAATTGCCCTAAACCATGTCAATCATTTGAGG
AAACCAATCTACCAGATTATGTTGCAGAAACAATAAAGCGAATGAATTTC
AACGAGCCTACGCCAATCCAAGCACAAGGGTTTTCTGTTGCTCTATCAGG
TAGAGATAGTGTTGGTATTGCTCAAACTGGTAGTGGGAAAACCATTTCGT
TCATGTTGCCTGCATGTGTGCATATTCATCACCAAGAACCACTCAGAAGT
GGAGATGGCCCAATTTGTCTTGTCCTTTGTCCAACCAGAGAACTTGCTAT
TCAATGTCAAACAGTTGCCGGTGAATTTGGTAAATCCAGTCGTATCAGAA
GTACATGCATTTATGGTGGTGCATCAAAAGGACCACAAATTCGAGATCTA
GAGAGAGGATCTGAGATTGTTGTTGCTACACCAGGACGTCTTATCGATTT
ACTTGAGATGAGAAAGCTTACCTTGGGTCGTGTCACTTACATGGTTTTAG
ATGAGGCAGACAGGATGTTAGATATGGGTTTTGAACCACAAATTCGTAAA
ATCTTTGACCAAATTCGTCCAGACAGACAAGTTCTTATGTGGTCTGCTAC
ATGGCCAAAAGAAGTTCGAAAACTTGCAGAGGACTTTTTGAAAGATTATG
TTCAAATCAACATTGGTAATATAAACATCCATGCAAATCACAATATCTTG
CAGATTGTCGATGTTTGTCAagaatatgaaaaagaaaataaacttgTCAA
ACTGCTTGAGGAAATAATgggagaaaaagaaaacaagacCATTATTTTTT
GTGAAACCAAACGTAAAACAGATGATATTACTCGACGCCTTCGCAGAGAT
GGtTGGCCTGCTATGTGTATCCATGGAGACAAATCCCAACCTGAAAGAGA
ATGGGTCCTAAAAGAATTCAGAAGTGGAAAGTCACCAATTCTTCTTGCTA
CTGATGTTGCTTCTCGTGGATTAGATATTCCAGACATCAATTTTGTTGTC
AATGTGGATTACCCTAACAACGGAGAAGACTATATCCATCGTATTGGACG
TACAGCTCGTGCTAATCGAACTGGTACTGCTTACACCTTCTTCACACAAA
ACAATGGTAAAAATGCTGCAGAGCTTGTATCAGTCATGCAAGAAGCAAAC
CAAGTAGTCCCACCCAAGCTTCAGGATCTAGCTAAAGGGCATTATGGTGG
ACGAAAGAGAGTGAGATACAGTTCTGAAAGTGACGATCATGGTGGCAAAC
GTTTCGCTGGAGGATCTCGAAGCGGAGGAGGTTCACGAAGTGGTGGCTAC
AGCGGTGGTGGTGGTGGCTCCCGCAGTGGAGGATACGGAGGTGGTGGCTC
CTCCAGAGGATATGGTGGAAGCAGTGGAGGAAGCTCCAGAGGCGGAAGCA
GCCGTGGTGGGAGCTACGGTGGCGGAAGTAGTTATCAAAATGGAGGTGGA
AGTAGCGGCGGTGGCCAAAATTGGAATAACGGAGGTTACAATCAACAACA
ACCTTCTCAACCGCCACAGCAATTACAAGGTGGTAgtggcggcggcggcg
gtggtGCTGGTAACGCCGACCAATGGGCACAATATCACAAACAAATGGCA
GAGTGGCAACAAAAGAACCAACAATGGCAACAGTGGCAGTCAACACAGGG
TGGCTCTGGACACTAAAACTTTATACCGATAAGAGACATTTAATTTATTT
AGCGTATATGTCGTTAAGGTGGTCATCACGCACTAGCAAAAAATCAAGGT
TTTAAATAGAAAAGCCTTGAATATGGTCGAAGTTTACAGACCTCATTCGA
TTGTCTATTTTACTACTGAATATCAGCCGATTTTCCTATTGCTATTTATT
AATTGAGTAAGCTTGTCTCCTCATCTTTATGCACTTCATAAACTTGTAGT
ATTAATAAAATCTGAATTATCATTAATTTTGACGATCGTAGCTTAgcatg
ttattattttttaaacaagaGTAAACGGATTTTATTTTACTGTATCTTCT
TGTCGTGTTGCTATTTTGTGTCTTTAGTTGCAACACGGGTTATTTGTCAC
GtaaatgtatataaaaactGATAACGGTAAAAGATACaagtgtttttatt
tgttttaaaagatcatgtatttatttttctgtttaGTCCATTTTATCCTT
GTCCCTCGAGC
Run BLAST on NCBI

transcript from alignment at scaffold_386:193741..201111-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063362 ID=TCONS_00063362|Name=TCONS_00063362|organism=Clytia hemisphaerica|type=transcript|length=7371bp|location=Sequence derived from alignment at scaffold_386:193741..201111- (Clytia hemisphaerica)
CAATTTTGTGGAGCAGGCATGTTTACAACTAGATTAAATTTAGCATGATT
ACTCTGGAATTAAATTTAGAAGAATGCAGCCGATTTTGCGAAAGTATGAC
GTATCTGTGAATTTTGATTGGCTCTTGAATAAATTACCCAGAATCCTTTT
CCAGACCTTTCATTTTTAGCGAGGAACAGCATTTTTCTTTCACACACACG
GCAGGTCAAACTGGTGAAGACTGACAAGTCAACTTTTACTAACTCTTCAG
AGTCTTCATTATAAACGTCACTTTGTTCACTCACAACCGTTTAAAGTCAA
AAACACTGTAAAAATGTATGACTCTTTACCATCATCATTTGGTAAAAGAT
ATGACAGAGATGATAGAAGAGGTGGTGGTGGAAGAGGGTAAGAGTTTTGT
TCTTTGCGTTTTCTTGTTTCGCTCTTGTAATTTATGCCATTCTGCTTATG
TTCACAGAAATCATAGAACCTAAATTTACTTGAACCTCTAGTATTAAGCT
ATTTCTTTTGTGGTAGTTTTTGGATTTTACTGTAGAAATAAACAATGTCC
TAAGTAGCAAAATAATTATATAAGCGAAATGTGTTGAGACAGAAAATTTA
TATTTCAAATGGAAATGACATCTTTTCATTGCAACTTTTATATGAAATCA
TCTAATACAATAGCATCGAGTGGGTTAGTACTTTTGGTTGAATTGGGTCC
TAAATTGTCCCATATTGGGCCATTCCAGAATTTGTCTGTAACAGGGGGCG
GACGACACAGGATTTCCGAGGGCAAAAGCTTTCATCAAAATTCAAAATTT
CCAGGGCGAGAGAAGAAAATGTATAAATTTCCAAGACATTTGAATTTAAA
AAGGCAAAAATAAGCAGAATTTCCAATGCATTTTGCAAAAGTACATGGAT
TTTTATTGGAATTTCTGAACACCACTGGAAAAGAAAAATTATTTCTGAGG
CTAGAAAAAATCATTGGTTGAAATAAACTTTTTTTGATAAGACCAGTAAA
ATTTTGCTGAGGCTGGTCTGTTCTTATTCATTTATTTGATTTATTTATAG
GGTGTAAATAAGATATTTTAGGCATTATACCCAATTTTTACTTGGATTTT
GACAAAACCCAAAAGATCGAGTTTCAAGGGGGAGGGGTCTCCTGCCTAAG
GTAGGGGGTCTTCATAAAATTATTATTTCTGTTTTACTTTCTTAAAGCAA
TCTTTAACAGTCAAGAACAAGTACAAGTAAGGATACCTTCGGCAATTCTC
TCCTAACTAGGAGAGTTGTATCCTAATTTGGGGATTTAGGTATCCTAGAT
AGGAGAGCAGACAAGCAGACTCTTTGACCTGAATTTTTGAGGTTGCTGCT
TCGATCCGCGTTTGGAAAACTATGCAAACCTTTTCTTCATCGAGATTTTC
ACCACTGACCAAATTTTAAAGTATTTTCTCTGGTGGGTTCCTCAAAAATT
AACATCCTTAATAATCTGCTGTTAATAAGAGCCTAAAATTTTGCTAACAC
AAGTTAAAGATTTGTTTTTCTTTTTACGGAACGCCCCTCTACGGTCCGAA
TTTCAAAATGGTAGCCGTAAAGAAGGAAGGGACCTGGGTGATTTTCGCGC
AAAAAAAAGCGTTCGAATATGCTAGTTAGCACATTTGAGTGGTTTTGGGC
TATCGTTTAGAATTCCGCCAGCCAAACTCAATGAAATTCGGTACACAATC
TCATTTGCTTATTATTTACATCTTGGAAGTGGTAAGATGGCGCGGATGTC
TCTGGATGGTGAAAAATACAGGTTTTTTGGTTTTTAGTATCCAAATTAGG
ATGTTGATTGCTATATTGGATACTTTTTTGTAACCAATTTAAGATTCTCT
CCTAAGTAGGAGAGAGGTAGGAGAGAGATTGCCAAAGGTATCCTAACTTG
CACTTTTTCTTGACCGTTAAGGGGGCAGACTGAAATATCTATAGAATTTC
CTAAGGGAAGTTTTAAGTTTTCAAATGCATTTCCTAGGGTCGTGACCCCT
ATAGAAACAAGAATAAGCTACTTCTGACTGACATTATATGTAAAATATCA
AAACCTGAGTAAAAGGTGCTCCGATATATTTACACTTAAAAAATGAGTTA
TTGATAATAAACTTACGTAGGAGCAAGTCTAGCCAAGTTTGATAAATGAC
GTGTCATGTGGAATTGGAGGCTAAAAATTATTAATTTGGAAGATGAATCA
ACATAGGAAAATTATGATATGGTTTTTTATGTCTATTTTACTAATTCAAA
GTAAGTTTTTATTGGTACTGTAATAGCAACTGTCAAAATTTCATACAGGC
TCTTTTCTGAAATATTTTAAGAATATGGCTAATGTCACGCTAATGTCACT
TTTTCTTTATTTCAGTGGATATGGTGGTGGATACGGTGGTGGCAGAGGAG
GCGGTAGAGGTGGCGGTGGTGGAGGAAAATTCAAGGATAATCAAGCAGGG
GCCAGTTTGAGAAAACCAAGATGGAATATGGACAGTCTCCCCAGATTTGA
TAAAAACTTCTATAGAGAGCACCCAAATGTCCAAGCCCGCAGTATGGTGA
GTCAGGATTTTGGTTGAGTTTTTAGGTTGAGCAGCCTAGTCTTCTCTGGT
GCATAAAAACCAGTAAACCCATTACCAGCCATTATAAACATTACTTTTCT
CCAATCAGCTCATTGATCTATTTGAAATTGTATTTTCTTAAGCTCCAGGT
CCAAATTATACACATGTTATTTTGTTTCGTTCTTTCGTTAATCCCCTGCC
GTTAATTGTAAAATAGACTCCTTATCCTTTGATGGTTCTACTTTTAGGAA
GCTGTAGAAGAATACCGTAAAGCAAGAGATATTACTGTCGCTGGACGTAA
TTGCCCTAAACCATGTCAATCATTTGAGGAAACCAATCTACCAGGTAAAA
TAAGCTAGTGATTGGTCATTATTCAGACCATCAACAATCATTCAAACACC
CTAAGACTTCATGTTTGATTTGTTCTCTACTCTCAGGTACCTAATAAGCA
GAGATTTTTCAAAAATAGGGTAGGGTGTCTTGTTTCTTTGAAAATTATGC
TTGCAGGGAAAATCTGGGAAATCAAAAAGGCTTAAAACATCAAGCACCCA
AGGATATTGATCATTTATTTTCAGATTATGTTGCAGAAACAATAAAGCGA
ATGAATTTCAACGAGCCTACGCCAATCCAAGCACAAGGGTTTTCTGTTGC
TCTATCAGGTAGAGATAGTGTTGGTATTGCTCAAACTGGTAGTGGGAAAA
CCATTTCGGTAAGCGTTTATAAATCTTTTTTCTTTGATAGTTGATTTTCA
TTATTGTTAAATTTAATGTCATCATACAGTGGTAGCAACTCAATTTGTAA
TTTATTTTGCCGAAACAGTGGGGAATGCCAAGTTATTTATTGACACCATC
CTCTTAAGCTATCATTTTTGACTGAAAGAAATGTGGTGAAATAAAGAACC
TTTCTTTCATTTTAACTTTGTTTTTTTGTTAATAGTTCATGTTGCCTGCA
TGTGTGCATATTCATCACCAAGAACCACTCAGAAGTGGAGATGGCCCAAT
TTGTCTTGTCCTTTGTCCAACCAGAGAACTTGCTATTCAATGTCAAACAG
TTGCCGGTGAATTTGGTAAATCCAGTCGTATCAGAAGTACATGCATTTAT
GGTGGTGCATCAAAAGGACCACAAATTCGAGATCTAGAGAGAGGATCTGA
GATTGTTGTTGCTACACCAGGACGTCTTATCGATTTACTTGAGATGAGAA
AGCTTACCTTGGGTCGTGTCACTTACATGGTTTTAGATGAGGCAGACAGG
ATGTTAGATATGGGTTTTGAACCACAAATTCGTAAAATCTTTGACCAAAT
TCGTCCAGACAGACAAGTTCTTATGTGGTCTGCTACATGGCCAAAAGAAG
TTCGAAAACTTGCAGAGGACTTTTTGAAAGATTATGTTCAAATCAACATT
GGTAATATAAACATCCATGCAAATCACAATATCTTGCAGATTGTCGATGT
TTGTCAAGAATATGAAAAAGAAAATAAACTTGTCAAACTGCTTGAGGAAA
TAATGGGAGAAAAAGAAAACAAGACCATTATTTTTTGTGAAACCAAACGT
AAAACAGATGATATTACTCGACGCCTTCGCAGAGATGGGTAAGTCACTGT
TTCTCACTTAACATTTGCACATTTTGCTTTTCTGTCAGGATTCTTAATTC
TCATTTTAATACTTTTACGTTCCAGCTTAGATTGCAGTGTTTATAGGGAA
CTTCCCCTTTTTATGAAATATTTTTTAAATTATTGGGGCTAAAGATTGAA
TTTCAAACAATTTTCTTTTAGTTGGCCTGCTATGTGTATCCATGGAGACA
AATCCCAACCTGAAAGAGAATGGGTCCTAAAAGGTAAATTGCAAAAAATA
AGAACTAAGCCTAAGATAACAAATTTAGTTATTTTAAATCAAAAAATTTG
AAAAATCCCTAGGAAAATAAAGAAATGTGTCCAAAATAGGGCAAAACTGC
CAAAATTTATTCCCGTGAAATATAATTTTTTGGAATTTTTTTACAACTAC
AAAAATTAGTTTAAATAATTAAAATCTGAAATTACTTCCCTAGCATGCAT
GCATGAACTTTTCCTATAGAATATCAAAGATTTACGAATTATCAAGCTGA
CCTCAACAGGATGATAATAATGTCTTCTTACATCTTAGAATTCAGAAGTG
GAAAGTCACCAATTCTTCTTGCTACTGATGTTGCTTCTCGTGGATTAGGT
AATAAGAGGAATTCATGGCATTTGCAACACTGTTTTGACTTAAGTTGCAA
TTTAGTTTACATTACCAATCTCTATGTTATAACTTCTTTACTTTTAAACT
ATGTAGTTGTTTGTGTTGTATGGAATGTTTTATTTTTAATAGTGATTTTT
TTGGATTTTATTTTTTTTTATTTTTAATAGTGATTTTAAATGCAGGTCTT
TTCTTTCTTTATTAGGTGCTGTTGGTGCCACTTAACGACGACACATGACA
TTGAATTACCCACATACTTAAAATAATTGGAACATATAAGGAGTTCTCAA
GAGTTTTCACGCACAATTAAATTTGTAAAACAGCTGGTTCTCTCAGTCAA
GATCTAGGCTCTAGCTTAAAAAAACTCAGGTAGGCACATGTATCAAAGGC
AGTTTCCAGTCATAAAAAAACTGTCAATCGAATCTTGCCTAGATTTCTTG
GCATATTTCTAAAAATGTACAGAATCAGCTGGTGCGTGACAACAAAGAGC
TCCTGTAATGAAAACAATGTTTCCAAACGTCTGGTTATGGTGAAATTTCA
ATGTTATGTTGCAATTCGTGTGTGTGGCACCGATTGATAAACTCGCTTGG
ATATTATGGTTTTCTACCTAATTTATTCAAGCTAACTTTAACCTTTCAGT
ACTAAATTTTTTGTTATATCCTGCTGTTTATATATATTCAGTTACACACC
TCACAATTCCACACTCTAAACCTATCAGTTTTCATTTCAGCGATATAAAA
TTATTATACATAGTAGACTGACAAGAATTATCCTGAATTTTTCAGATATT
CCAGACATCAATTTTGTTGTCAATGTGGATTACCCTAACAACGGAGAAGA
CTATATCCATCGTATTGGACGTACAGCTCGTGCTAATCGAACTGGTACTG
CTTACACCTTCTTCACACAAAACAATGGTAAAAATGCTGCAGAGCTTGTA
TCAGTCATGCAAGAAGCAAACCAAGTAGTCCCACCCAAGCTTCAGGATCT
AGCTAAAGGGCATTATGGTGGACGAAAGAGAGGTATGTCTATGGAAGGCC
TCGNTAATCGAACTGGTACTGCTTACACTTTCTTCACCCAAAACAATGGT
AAAAATGCTGCAGAGCTTGTATCAGTCATGCAAGAAGCAAACCAAGTAGT
CCCACCCAAGCTTCAGGATCTAGCTAAAGGACATTATGGTGGACGAAAGA
GAGGTATGTCCATGGAAGGCCTCATTAAGAATTGAAGTCGATACAATTTC
AAACTGGGATTTTGAAGATTTCTTGTTCTATTCAAACGCATGTTATAATC
TGCTTTGTATTTCCGATTTGAGAAGCCATCGTATAATTCTCATCTGTCAG
TTAAAGCTTTTATTGTCTTAGCATTTCGTCAAAACTTAGTCTTGAAACGA
TAGAAAACTCTTCTTTTCTTTCAGTGAGATACAGTTCTGAAAGTGACGAT
CATGGTGGCAAACGTTTCGCTGGAGGATCTCGAAGCGGAGGAGGTTCACG
AAGTGGTGGCTACAGCGGTGGTGGTGGTGGCTCCCGCAGTGGAGGATACG
GAGGTGGTGGCTCCTCCAGAGGATATGGTGGAAGCAGTGGAGGAAGCTCC
AGAGGCGGAAGCAGCCGTGGTGGGAGCTACGGTGGCGGAAGTAGTTATCA
AAATGGAGGTGGAAGTAGCGGCGGTGGCCAAAATTGGAATAACGGAGGTA
AGTTTCTAAACTTAAAATTTAAAACAACGCCAAATAAACTAAGTGAACAC
ACAAAAGCAAGTGATATTTTTACAGAGAAATAGAGCCTTGTGTTATCTAA
GATGATAAGCGCAGATGTTTCCCCAACAAGTAATCAAGTGTCCCAAAATA
TCAAAAATAACTTTGTTCTTAGGTTTTGCCCAATTTTGAATCTTCATTTT
AAAAATGGACCCGATTGAAAGAATTATTCTTTGACGTTCATCAGGTTACA
ATCAACAACAACCTTCTCAACCGCCACAGCAATTACAAGGTGGTAGTGGC
GGCGGCGGCGGTGGTGCTGGTAACGCCGACCAATGGGCACAATATCACAA
ACAAATGGCAGAGTGGCAACAAAAGAACCAACAATGGCAACAGTGGCAGT
CAACACAGGGTGGCTCTGGACACTAAAACTTTATACCGATAAGAGACATT
TAATTTATTTAGCGTATATGTCGTTAAGGTGGTCATCACGCACTAGCAAA
AAATCAAGGTTTTAAATAGAAAAGCCTTGAATATGGTCGAAGTTTACAGA
CCTCATTCGATTGTCTATTTTACTACTGAATATCAGCCGATTTTCCTATT
GCTATTTATTAATTGAGTAAGCTTGTCTCCTCATCTTTATGCACTTCATA
AACTTGTAGTATTAATAAAATCTGAATTATCATTAATTTTGACGATCGTA
GCTTAGCATGTTATTATTTTTTAAACAAGAGTAAACGGATTTTATTTTAC
TGTATCTTCTTGTCGTGTTGCTATTTTGTGTCTTTAGTTGCAACACGGGT
TATTTGTCACGTAAATGTATATAAAAACTGATAACGGTAAAAGATACAAG
TGTTTTTATTTGTTTTAAAAGATCATGTATTTATTTTTCTGTTTAGTCCA
TTTTATCCTTGTCCCTCGAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039705XLOC_039705Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063362-exon-scaffold_386-1575043694:200725..201111TCONS_00063362-exon-scaffold_386-1575043694:200725..201111Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1575043694:198566..198746TCONS_00063362-exon-scaffold_386-1575043694:198566..198746Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1575043694:198218..198314TCONS_00063362-exon-scaffold_386-1575043694:198218..198314Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1575043694:197854..197987TCONS_00063362-exon-scaffold_386-1575043694:197854..197987Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1575043694:196974..197626TCONS_00063362-exon-scaffold_386-1575043694:196974..197626Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1575043694:196729..196790TCONS_00063362-exon-scaffold_386-1575043694:196729..196790Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1575043694:196364..196423TCONS_00063362-exon-scaffold_386-1575043694:196364..196423Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1575043694:195330..195566TCONS_00063362-exon-scaffold_386-1575043694:195330..195566Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1575043694:194665..194937TCONS_00063362-exon-scaffold_386-1575043694:194665..194937Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1575043694:193741..194417TCONS_00063362-exon-scaffold_386-1575043694:193741..194417Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1510915933:200725..201111TCONS_00063362-exon-scaffold_386-1510915933:200725..201111Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1510915933:198566..198746TCONS_00063362-exon-scaffold_386-1510915933:198566..198746Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1510915933:198218..198314TCONS_00063362-exon-scaffold_386-1510915933:198218..198314Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1510915933:197854..197987TCONS_00063362-exon-scaffold_386-1510915933:197854..197987Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1510915933:196974..197626TCONS_00063362-exon-scaffold_386-1510915933:196974..197626Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1510915933:196729..196790TCONS_00063362-exon-scaffold_386-1510915933:196729..196790Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1510915933:196364..196423TCONS_00063362-exon-scaffold_386-1510915933:196364..196423Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1510915933:195330..195566TCONS_00063362-exon-scaffold_386-1510915933:195330..195566Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1510915933:194665..194937TCONS_00063362-exon-scaffold_386-1510915933:194665..194937Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1510915933:193741..194417TCONS_00063362-exon-scaffold_386-1510915933:193741..194417Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1491911889:200725..201111TCONS_00063362-exon-scaffold_386-1491911889:200725..201111Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1491911889:198566..198746TCONS_00063362-exon-scaffold_386-1491911889:198566..198746Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1491911889:198218..198314TCONS_00063362-exon-scaffold_386-1491911889:198218..198314Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1491911889:197854..197987TCONS_00063362-exon-scaffold_386-1491911889:197854..197987Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1491911889:196974..197626TCONS_00063362-exon-scaffold_386-1491911889:196974..197626Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1491911889:196729..196790TCONS_00063362-exon-scaffold_386-1491911889:196729..196790Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1491911889:196364..196423TCONS_00063362-exon-scaffold_386-1491911889:196364..196423Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1491911889:195330..195566TCONS_00063362-exon-scaffold_386-1491911889:195330..195566Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1491911889:194665..194937TCONS_00063362-exon-scaffold_386-1491911889:194665..194937Clytia hemisphaericaexon
TCONS_00063362-exon-scaffold_386-1491911889:193741..194417TCONS_00063362-exon-scaffold_386-1491911889:193741..194417Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_386supercontigscaffold_386:193741..201111 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
132.777	131.301	254.768	339.489	653.73	478.336	209.373	221.235	147.377	179.034	264.21	182.306	311.904	395.714	269.905	263.073	243.203	247.769	203.406	195.627	350.395	364.555	219.439	253.932	363.773	405.694	174.778	318.382	203.757	253.433
Blast
[Close]
BLAST of TCONS_00063362 vs. Swiss-Prot (Human)
Match: DDX5 (Probable ATP-dependent RNA helicase DDX5 OS=Homo sapiens GN=DDX5 PE=1 SV=1)

HSP 1 Score: 602.438 bits (1552), Expect = 0.000e+0
Identity = 299/439 (68.11%), Postives = 359/439 (81.78%), Query Frame = 2 
Query:  470 GASLRKPRWNMDSLPRFDKNFYREHPNVQARSMEAVEEYRKARDITVAGRNCPKPCQSFEETNLPDYVAETIKRMNFNEPTPIQAQGFSVALSGRDSVGIAQTGSGKTISFMLPACVHIHHQEPLRSGDGPICLVLCPTRELAIQCQTVAGEFGKSSRIRSTCIYGGASKGPQIRDLERGSEIVVATPGRLIDLLEMRKLTLGRVTYMVLDEADRMLDMGFEPQIRKIFDQIRPDRQVLMWSATWPKEVRKLAEDFLKDYVQXXXXXXXXXXXXXXLQIVDVCQXXXXXXXXXXXXXXIMGEKENKTIIFCETKRKTDDITRRLRRDGWPAMCIHGDKSQPEREWVLKEFRSGKSPILLATDVASRGLDIPDINFVVNVDYPNNGEDYIHRIGRTARANRTGTAYTFFTQNNGKNAAELVSVMQEANQVVPPKLQDLAK 1786
            G  L K +WN+D LP+F+KNFY+EHP++  R+ + VE YR++++ITV G NCPKP  +F E N P  V + I R NF EPT IQAQG+ VALSG D VG+AQTGSGKT+S++LPA VHI+HQ  L  GDGPICLVL PTRELA Q Q VA E+ ++ R++STCIYGGA KGPQIRDLERG EI +ATPGRLID LE  K  L R TY+VLDEADRMLDMGFEPQIRKI DQIRPDRQ LMWSATWPKEVR+LAEDFLKDY+ INIG + + ANHNILQIVDVC + EK+ KL++L+EEIM EKENKTI+F ETKR+ D++TR++RRDGWPAM IHGDKSQ ER+WVL EF+ GK+PIL+ATDVASRGLD+ D+ FV+N DYPN+ EDYIHRIGRTAR+ +TGTAYTFFT NN K  ++L+SV++EANQ + PKL  L +
Sbjct:   38 GEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVE 476
The following BLAST results are available for this feature:
BLAST of TCONS_00063362 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DDX50.000e+068.11Probable ATP-dependent RNA helicase DDX5 OS=Homo s... [more]
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