TCONS_00063376 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063376
Unique NameTCONS_00063376
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1232

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063376 ID=TCONS_00063376|Name=TCONS_00063376|organism=Clytia hemisphaerica|type=transcript|length=1232bp
CGCCATTTGACTTTTCTTATCATTGATCTGGGAAAACGTGCACGAAATGC
TGTCATAATTCATAATCATTATTTAATTGGATAATAATTGATATCATGTC
ATCAAAGAGAACTGTTGTCAAGAAGAGATTAGATCTATTGGAAGATTCTG
GTACACTTGCCACTGTCTTGTATCAAGATGGGCTGGTAAAAGTTGCTGAT
gttaattttttcaactttctgaAGTCCACGCAACCAATAACATCATTTCC
AGCAAATGATCTTGGGCACACAACAGGACTTAATGTTGTCCCAAATAGCA
TGAAAGTCCCGTTGGATAAAATTTCAGAAGGCCTTACTGCTTTTGCCTAC
TATGATGATGGCCTATACTATCCTGCCACTGTGAACAAACTCAGCAATAC
AgttaaaagaagaaagaaagACGACGAACGCAGCACTACCAATGAtccaa
ataaagaaaataacaAAACACCAAACAGTGATGAATCCAAAACTAAAAAA
GGAAGAGGAAGCTCAGAAAAAAAACCCAAGAAGAAGCAAGGTAGTGCCAG
TAAGAACCATATCAAGACAAATACTGATACAGAAGAAAGTGAGATAAAAA
AAAGGAAAAAGCAAGATGAGCAGGCCAAGAAAGAGGCCCAAGTCAACCGC
AAACTTGTGGAATTAAACAGAATATACCCCACAAACTTGCCATCAAAAGA
ACGATCTTACTCTATGGAACTACAACCCATTCCAAAGACTCCAACAACAG
AGAAAGGAATTAACAACCGTGATGATGCTAATGATGGATCATacattaat
aataataaaaagtatTGTTTATTATTGTTATAAAATGTGCAGGATGTCTG
AGTTCGTAACATAAAAACTTTAAGGAATTTTGAATTCTCTATCAACTTGC
TTTTATATTTAATTTGGTTAATCCTGTTTTACTTATGATTGAGTGATGTT
ACTACTTTGTATCTTTTTCAGTCCAACTATACGTAAATCGCTCCATTCTA
GCTTATCTGCTAGCAGTCCACCATCTCTAACAGGAGGTTCACCTAGCTCA
AGACTCTCTGGTATTGGTTTTGGCATTGCAAGGAGCCTTGGTGTCACTTC
GTGTGTAGATTGTGAGCAAAAGGATGTTCAGATCTTTAAGCTGAAGAACA
CCATTCAAAATTATGAACAACAATTGAATGATAAAGACACGGTAACCACA
GAACAAACAGTATggatatttttcattcaaaa
Run BLAST on NCBI

protein sequence of TCONS_00063376-protein

>TCONS_00063376-protein ID=TCONS_00063376-protein|Name=TCONS_00063376-protein|organism=Clytia hemisphaerica|type=polypeptide|length=245bp
MSSKRTVVKKRLDLLEDSGTLATVLYQDGLVKVADVNFFNFLKSTQPITS
FPANDLGHTTGLNVVPNSMKVPLDKISEGLTAFAYYDDGLYYPATVNKLS
NTVKRRKKDDERSTTNDPNKENNKTPNSDESKTKKGRGSSEKKPKKKQGS
ASKNHIKTNTDTEESEIKKRKKQDEQAKKEAQVNRKLVELNRIYPTNLPS
KERSYSMELQPIPKTPTTEKGINNRDDANDGSYINNNKKYCLLLL
Run BLAST on NCBI

transcript from alignment at scaffold_387:16902..21779-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063376 ID=TCONS_00063376|Name=TCONS_00063376|organism=Clytia hemisphaerica|type=transcript|length=4878bp|location=Sequence derived from alignment at scaffold_387:16902..21779- (Clytia hemisphaerica)
CGCCATTTGACTTTTCTTATCATTGATCTGGGAAAACGTGCACGAAATGC
TGTCATAATTCATAATCATTATTTAATTGGATAATAATTGATATCATGTC
ATCAAAGAGAACTGTTGTCAAGAAGAGATTAGATCTATTGGAAGGTACAA
CTATTGTGTTCATGTTGTTTTGTGAGATTTATATAATAATACAGCACTTT
ATTATTAATATAATAATACAGCNCATGTTGTTTTGTGAGATTTATATAAT
AATACAGCACTTTATTATTAATATAATAATACAGCACTTTATTATTAATG
CTGTGGTTATTGCATCATTATTCATGTGAGTGCTTGTGAGATACAAAAAG
TAAGCTTTTCAAGACTTGAAATATAGTTATATGAAAAGTCATTTTATCAC
AATTAATATCTACTGTCAGGTTTGCCTAATCCTGACCACCCCTATCTAAC
CCTGACCTCCCCCTCCTCTATATATAATGCGGCAATCATAAATATCTTCA
TTTTTTTGCGTCCTCATTGGGTCTAAAAAGTAAGTCGGTCGTTCGGTCGG
TTGTAAAAATTTTCGGGTTTCAATTTTTCCATCCATTTTTGGAGTGGAGA
GGAATCTGCCAGCAGCCAAAACAACCGCGACCCCAAAATGGCGCATGTAA
TGATAAACAAAGTCAAAATGCTGCGAATTATATCTCTGTCTAATATCTAA
TTTCATAGATTCTGGTACACTTGCCACTGTCTTGTATCAAGATGGGCTGG
TAAAAGTTGCTGATGTTAATTTTTTCAACTTTCTGAAGTCCACGCAACCA
ATAACATCATTTCCAGCAAATGATCTTGGGCACACAACAGGACTTAATGT
AAGTGAATATTTTTTTTTACTGGATTTTTTAATTTTTTTAAATGGTTGTT
GTTATGTTTCACATCACAACACAACATGAGGGTACCAGTATACACACCGA
AAAGGGTCTCTATGATATAAATGGTGCAGTCACCCAAACAGTATAAATTC
CAGGACTCTAATAGATGATGATATTGTCTCTGTTTGATAAATCTAGTCAA
GACATCTTTTACTTTCAGCTTAATGTTGGTGCTTTTTTTACAGCAGGACT
TTTTGCAGCATTTAGCATTGGAAGATTTTCAGATGTTAAGCTGCCATTCA
AAAAGTCAATGCCCCTTTATAATTTCCCGTTTAGGTTGTCCCAAATAGCA
TGAAAGTCCCGTTGGATAAAATTTCAGAAGGCCTTACTGCTTTTGCCTAC
TATGATGATGGCCTATACTATCCTGCCACTGTGAACAAACTCAGCAATAC
AGTTAAAAGAAGAAAGAAAGGTATATATCAAATTAAATGTGTTAAATATA
CTTCAATATATCTAATAATATATATATGGTTGTGGTGCTATGTATAAGTA
AGAAATGTTGCTCTCATCACTGATAAACCCCATTCCTTAATTTTGAGGTA
AAACATTACTTTTTTGTCAGCGTTTTGCTTGCATATGGAACGTTGGATTT
TCTTTTAAAGCGCAGGATCACTGATTCTGAAGTCGAGTGACCCTCTGGGT
ATCATACTCTCCATATTTCTTTCAGAACTGTAGGAGACCTGCCTTTTAAA
AACAAACACAAAGCAAATAGGATTTTTTAACCTCTAAAAGGCTTATTCAC
ACATACACTTTTTGAAATACAGGAGTGGTGATTGTATGCCTAGGCTACCA
AGTTACCGACTTCATTTCTTTTTCAGACGACGAACGCAGCACTACCAATG
ATCCAAATAAAGAAAATAACAGTTTGTGCATATTTTCCTTACAACCCTGT
CTCAGTGGGATATATTATTTTAGGCAGGTTGTAGTAATTCACTATCAACT
TCCCATAGGTTTCTATCCTAATTCAGTAACATAAAGCAATAAATACAAAT
GGCTAAACAAAGGGGTTGGAAATTTTCTGAAGATCATAATATAATAAGCA
GGGGGGTTTGGAAAACTTTCTTCTGAAAACACTGACAAAGGGCAAAAATA
GGCTAAAATAGCCTAATTGAAGAAGAATGAAGCTGAATGAAGGAACTTTC
CTTTGTCAGTCAAAATATTTTTTTCAAAATTAATAAACATGTCCTAATAA
GGTCCGATGGTTGGAAAAAATCAAAAAATTAACAAATGGAGAGGCTGTTT
ATTCAGCACATGAGAGTAAGGTCTTAAGCTAATGTCTATCTTTTTTCATT
ACATATATATATAGAAACACCAAACAGTGATGAATCCAAAACTAAAAAAG
GTAATTGGTAAAAATGCAGAGGCAGCTTTGTGAATATTTTTAGTTAATGG
ATATGTAAAATGTGCAATCGGCTTGTATTTTGCCTTTTCTTGAAATTTTA
TATACATATAACTGCCATCTGTCTCATACTATATATTGAATTAGATTTTT
AGTGGTTTTTATTTTGATAACATTTCGTTCATTTCTACAGGAAGAGGAAG
CTCAGAAAAAAAACCCAAGAAGAAGCAAGGTGAATTCATTTTCTTCAATT
TGATCATTATTTATTAAAACGTTTTCAAAATTAAACTGTGATTGAAATTG
AAAATGGGATAAAAAAGATAATGTACTGTGGGATAATGATAAGATCAGAA
TTCTGTGAGGTTTAAAAAAACACAAATAATAGTATCACATTCATTGAATC
TTTAGGTAGTGCCAGTAAGAACCATATCAAGACAAATACTGGTAAATAGA
AATTTGCATTGTTGATTTTGTACAGTATATTCTAATATGCTACTGTATCG
CATAATTCACAATATTTGAAAATTGAAAAAAGAAGCTATCAAATTTGTAA
TAAATTTTCAACTTAGGATTTATTTAAATTGAAGAAATTTCTCATAAGAA
CGATTAGATATATTTATACTTTTTTCAGATACAGAAGAAAGTGAGATAAA
AAAAAGGAAAAAGCAAGATGAGCAGGCCAAGAAAGAGGCCCAAGTCAACC
GCAAACTTGTGGAATTAAACAGGTAAGAAATACAAATCAAAACATTTACA
GCGTAGCCTAAAGGAAGAATAGCCTCCCCCTGCCCTATCAAATAAAAATA
ACCTTTCCGGTTGTTGACTGTCTGGAGCATGAATCTGGAAGATGTCCAAT
AAATTTTGATAGGAACTTAATGAAGTTAATGTTCTGCAAGTTTGGCAAGA
CTATTTCTGTATAAAGATTGAGGAAGGATGATGATTGAATGATACATTTT
AATTTTTCAGAATATACCCCACAAACTTGCCATCAAAAGGTAATTCCTTA
TTTATTCAAATTTTACCATTGCAAATGAATAATAAGATATTCTTTATTGT
GGTGCAAATAAAGCCACGTAATTATATTTTTGAAATAATACGCCTCTGAT
AAAACAATGTTTTATTTCAGAACGATCTTACTCTATGGAACTACAACCCA
TTCCAAAGACTCCAACAACAGGTACAGCCTGTTTATTTTTAAGAAAAGAT
TATTGATTATTAGAGATGCAATTGCTTGTCCAGCGTTATCTGACTAGTCT
TTCTGTTCTTGTCCACTTTCAGTTGAAATCTAGCTTATGCGCAAGAGAGC
TAATATAGAAAATTGATCAAAGCATACAGTATGAAGCAACCCCCTTTTTC
AAATTTTGAATCCAAAATCAAACTGATTAACTAATTTGTATTTACTAACA
CACTATTTACAGAGAAAGGAATTAACAACCGTGATGATGCTAATGATGGA
TCATACATTAATAATAATAAAAAGTATTGTTTATTATTGTTATAAAATGT
GCAGGATGTCTGAGTTCGTAACATAAAAACTTTAAGGAATTTTGAATTCT
CTATCAACTTGCTTTTATATTTAATTTGGTTAATCCTGTTTTACTTATGA
TTGAGTGATGTTACTACTTTGTATCTTTTTCAGTCCAACTATACGTAAAT
CGCTCCATTCTAGCTTATCTGCTAGCAGTCCACCATCTCTAACAGGAGGT
AATAGCTTGTTCTTACAAGATCTCCACATTAAAGAAATAAAATTTGTTAT
TATTTACTCACTAAACCTGTAGCTTTTTACTCGTGAAATCTAAAGATAAA
CTAGAAAGTACTCTAGGCAGTTGACCACCAAAAGCTGGATGTTCACTGAA
TAAAACAAGTTTGTTTTTAATTTGTCCGTCACAAATAAAAGATCATTATG
TCTGGAATTCAAAAAAATGTATTGTTATATATATGCACAAGAAACAAAAA
ACAATTCCAGACTGTTACGGACACACTTTTTTTAGAAGCATGTAATTTTT
GTTTGCGATGGACAATTAAGGACAAACTTGTTTTTTTTTTCAGTAGACGT
CTAGCTGAAGTATGATATACTTTCCAAAATAAGAAATTATAATGATTAAT
TTTAGAAATGTAAAAACAAAAGGGAAAGAAATGCTGCCATGAAAGTAGGA
ATAATACTCAATGTTTAGCTTGATAAAAACAACAAATTTTATAATTTTTC
TCTAGGTTCACCTAGCTCAAGACTCTCTGGTATTGGTTTTGGCATTGCAA
GGAGCCTTGGTGTCACTTCGTGTGTAGATTGTGAGCAAAAGGATGTTCAG
ATCTTTAAGCTGAAGAACACCATTCAAAATTGTGAGTAAACATTTTACAC
TGCATTTTTTGAAACATTTTATCAAGTAAAGCAACACTGTGGAAATATGA
AAAAGCATTTACAGCCATTTAATTAAATGGCTATTTTACACAGTATAATG
TTTTAAATATGCTAGCGAATTATTCACTTTATAACTGTAAACTTTTCTAA
AACCAATCAAAACAAATCTGAGACATATGCACCTGTGTATTATTTCTGTT
GTCTTTAGATGAACAACAATTGAATGATAAAGACACGGTAACCACAGAAC
AAACAGTATGGATATTTTTCATTCAAAA

Coding sequence (CDS) from alignment at scaffold_387:16902..21779-

>TCONS_00063376 ID=TCONS_00063376|Name=TCONS_00063376|organism=Clytia hemisphaerica|type=CDS|length=8118bp|location=Sequence derived from alignment at scaffold_387:16902..21779- (Clytia hemisphaerica)
AGAAAGGAATTAACAACCGTGATGATGCTAATGATGGATCATACATTAAT
AATAATAAAAAGTATTGTTTATTATTGTTATAAAACGATCTTACTCTATG
GAACTACAACCCATTCCAAAGACTCCAACAACAGAATATACCCCACAAAC
TTGCCATCAAAAGATACAGAAGAAAGTGAGATAAAAAAAAGGAAAAAGCA
AGATGAGCAGGCCAAGAAAGAGGCCCAAGTCAACCGCAAACTTGTGGAAT
TAAACAGGTAGTGCCAGTAAGAACCATATCAAGACAAATACTGGAAGAGG
AAGCTCAGAAAAAAAACCCAAGAAGAAGCAAGAAACACCAAACAGTGATG
AATCCAAAACTAAAAAAGACGACGAACGCAGCACTACCAATGATCCAAAT
AAAGAAAATAACAGTTGTCCCAAATAGCATGAAAGTCCCGTTGGATAAAA
TTTCAGAAGGCCTTACTGCTTTTGCCTACTATGATGATGGCCTATACTAT
CCTGCCACTGTGAACAAACTCAGCAATACAGTTAAAAGAAGAAAGAAAGA
TTCTGGTACACTTGCCACTGTCTTGTATCAAGATGGGCTGGTAAAAGTTG
CTGATGTTAATTTTTTCAACTTTCTGAAGTCCACGCAACCAATAACATCA
TTTCCAGCAAATGATCTTGGGCACACAACAGGACTTAATATGTCATCAAA
GAGAACTGTTGTCAAGAAGAGATTAGATCTATTGGAAGAGAAAGGAATTA
ACAACCGTGATGATGCTAATGATGGATCATACATTAATAATAATAAAAAG
TATTGTTTATTATTGTTATAAAACGATCTTACTCTATGGAACTACAACCC
ATTCCAAAGACTCCAACAACAGAATATACCCCACAAACTTGCCATCAAAA
GATACAGAAGAAAGTGAGATAAAAAAAAGGAAAAAGCAAGATGAGCAGGC
CAAGAAAGAGGCCCAAGTCAACCGCAAACTTGTGGAATTAAACAGGTAGT
GCCAGTAAGAACCATATCAAGACAAATACTGGAAGAGGAAGCTCAGAAAA
AAAACCCAAGAAGAAGCAAGAAACACCAAACAGTGATGAATCCAAAACTA
AAAAAGACGACGAACGCAGCACTACCAATGATCCAAATAAAGAAAATAAC
AGTTGTCCCAAATAGCATGAAAGTCCCGTTGGATAAAATTTCAGAAGGCC
TTACTGCTTTTGCCTACTATGATGATGGCCTATACTATCCTGCCACTGTG
AACAAACTCAGCAATACAGTTAAAAGAAGAAAGAAAGATTCTGGTACACT
TGCCACTGTCTTGTATCAAGATGGGCTGGTAAAAGTTGCTGATGTTAATT
TTTTCAACTTTCTGAAGTCCACGCAACCAATAACATCATTTCCAGCAAAT
GATCTTGGGCACACAACAGGACTTAATATGTCATCAAAGAGAACTGTTGT
CAAGAAGAGATTAGATCTATTGGAAGAGAAAGGAATTAACAACCGTGATG
ATGCTAATGATGGATCATACATTAATAATAATAAAAAGTATTGTTTATTA
TTGTTATAAAACGATCTTACTCTATGGAACTACAACCCATTCCAAAGACT
CCAACAACAGAATATACCCCACAAACTTGCCATCAAAAGATACAGAAGAA
AGTGAGATAAAAAAAAGGAAAAAGCAAGATGAGCAGGCCAAGAAAGAGGC
CCAAGTCAACCGCAAACTTGTGGAATTAAACAGGTAGTGCCAGTAAGAAC
CATATCAAGACAAATACTGGAAGAGGAAGCTCAGAAAAAAAACCCAAGAA
GAAGCAAGAAACACCAAACAGTGATGAATCCAAAACTAAAAAAGACGACG
AACGCAGCACTACCAATGATCCAAATAAAGAAAATAACAGTTGTCCCAAA
TAGCATGAAAGTCCCGTTGGATAAAATTTCAGAAGGCCTTACTGCTTTTG
CCTACTATGATGATGGCCTATACTATCCTGCCACTGTGAACAAACTCAGC
AATACAGTTAAAAGAAGAAAGAAAGATTCTGGTACACTTGCCACTGTCTT
GTATCAAGATGGGCTGGTAAAAGTTGCTGATGTTAATTTTTTCAACTTTC
TGAAGTCCACGCAACCAATAACATCATTTCCAGCAAATGATCTTGGGCAC
ACAACAGGACTTAATATGTCATCAAAGAGAACTGTTGTCAAGAAGAGATT
AGATCTATTGGAAGAGAAAGGAATTAACAACCGTGATGATGCTAATGATG
GATCATACATTAATAATAATAAAAAGTATTGTTTATTATTGTTATAAAAC
GATCTTACTCTATGGAACTACAACCCATTCCAAAGACTCCAACAACAGAA
TATACCCCACAAACTTGCCATCAAAAGATACAGAAGAAAGTGAGATAAAA
AAAAGGAAAAAGCAAGATGAGCAGGCCAAGAAAGAGGCCCAAGTCAACCG
CAAACTTGTGGAATTAAACAGGTAGTGCCAGTAAGAACCATATCAAGACA
AATACTGGAAGAGGAAGCTCAGAAAAAAAACCCAAGAAGAAGCAAGAAAC
ACCAAACAGTGATGAATCCAAAACTAAAAAAGACGACGAACGCAGCACTA
CCAATGATCCAAATAAAGAAAATAACAGTTGTCCCAAATAGCATGAAAGT
CCCGTTGGATAAAATTTCAGAAGGCCTTACTGCTTTTGCCTACTATGATG
ATGGCCTATACTATCCTGCCACTGTGAACAAACTCAGCAATACAGTTAAA
AGAAGAAAGAAAGATTCTGGTACACTTGCCACTGTCTTGTATCAAGATGG
GCTGGTAAAAGTTGCTGATGTTAATTTTTTCAACTTTCTGAAGTCCACGC
AACCAATAACATCATTTCCAGCAAATGATCTTGGGCACACAACAGGACTT
AATATGTCATCAAAGAGAACTGTTGTCAAGAAGAGATTAGATCTATTGGA
AGAGAAAGGAATTAACAACCGTGATGATGCTAATGATGGATCATACATTA
ATAATAATAAAAAGTATTGTTTATTATTGTTATAAAACGATCTTACTCTA
TGGAACTACAACCCATTCCAAAGACTCCAACAACAGAATATACCCCACAA
ACTTGCCATCAAAAGATACAGAAGAAAGTGAGATAAAAAAAAGGAAAAAG
CAAGATGAGCAGGCCAAGAAAGAGGCCCAAGTCAACCGCAAACTTGTGGA
ATTAAACAGGTAGTGCCAGTAAGAACCATATCAAGACAAATACTGGAAGA
GGAAGCTCAGAAAAAAAACCCAAGAAGAAGCAAGAAACACCAAACAGTGA
TGAATCCAAAACTAAAAAAGACGACGAACGCAGCACTACCAATGATCCAA
ATAAAGAAAATAACAGTTGTCCCAAATAGCATGAAAGTCCCGTTGGATAA
AATTTCAGAAGGCCTTACTGCTTTTGCCTACTATGATGATGGCCTATACT
ATCCTGCCACTGTGAACAAACTCAGCAATACAGTTAAAAGAAGAAAGAAA
GATTCTGGTACACTTGCCACTGTCTTGTATCAAGATGGGCTGGTAAAAGT
TGCTGATGTTAATTTTTTCAACTTTCTGAAGTCCACGCAACCAATAACAT
CATTTCCAGCAAATGATCTTGGGCACACAACAGGACTTAATATGTCATCA
AAGAGAACTGTTGTCAAGAAGAGATTAGATCTATTGGAAGAGAAAGGAAT
TAACAACCGTGATGATGCTAATGATGGATCATACATTAATAATAATAAAA
AGTATTGTTTATTATTGTTATAAAACGATCTTACTCTATGGAACTACAAC
CCATTCCAAAGACTCCAACAACAGAATATACCCCACAAACTTGCCATCAA
AAGATACAGAAGAAAGTGAGATAAAAAAAAGGAAAAAGCAAGATGAGCAG
GCCAAGAAAGAGGCCCAAGTCAACCGCAAACTTGTGGAATTAAACAGGTA
GTGCCAGTAAGAACCATATCAAGACAAATACTGGAAGAGGAAGCTCAGAA
AAAAAACCCAAGAAGAAGCAAGAAACACCAAACAGTGATGAATCCAAAAC
TAAAAAAGACGACGAACGCAGCACTACCAATGATCCAAATAAAGAAAATA
ACAGTTGTCCCAAATAGCATGAAAGTCCCGTTGGATAAAATTTCAGAAGG
CCTTACTGCTTTTGCCTACTATGATGATGGCCTATACTATCCTGCCACTG
TGAACAAACTCAGCAATACAGTTAAAAGAAGAAAGAAAGATTCTGGTACA
CTTGCCACTGTCTTGTATCAAGATGGGCTGGTAAAAGTTGCTGATGTTAA
TTTTTTCAACTTTCTGAAGTCCACGCAACCAATAACATCATTTCCAGCAA
ATGATCTTGGGCACACAACAGGACTTAATATGTCATCAAAGAGAACTGTT
GTCAAGAAGAGATTAGATCTATTGGAAGAGAAAGGAATTAACAACCGTGA
TGATGCTAATGATGGATCATACATTAATAATAATAAAAAGTATTGTTTAT
TATTGTTATAAAACGATCTTACTCTATGGAACTACAACCCATTCCAAAGA
CTCCAACAACAGAATATACCCCACAAACTTGCCATCAAAAGATACAGAAG
AAAGTGAGATAAAAAAAAGGAAAAAGCAAGATGAGCAGGCCAAGAAAGAG
GCCCAAGTCAACCGCAAACTTGTGGAATTAAACAGGTAGTGCCAGTAAGA
ACCATATCAAGACAAATACTGGAAGAGGAAGCTCAGAAAAAAAACCCAAG
AAGAAGCAAGAAACACCAAACAGTGATGAATCCAAAACTAAAAAAGACGA
CGAACGCAGCACTACCAATGATCCAAATAAAGAAAATAACAGTTGTCCCA
AATAGCATGAAAGTCCCGTTGGATAAAATTTCAGAAGGCCTTACTGCTTT
TGCCTACTATGATGATGGCCTATACTATCCTGCCACTGTGAACAAACTCA
GCAATACAGTTAAAAGAAGAAAGAAAGATTCTGGTACACTTGCCACTGTC
TTGTATCAAGATGGGCTGGTAAAAGTTGCTGATGTTAATTTTTTCAACTT
TCTGAAGTCCACGCAACCAATAACATCATTTCCAGCAAATGATCTTGGGC
ACACAACAGGACTTAATATGTCATCAAAGAGAACTGTTGTCAAGAAGAGA
TTAGATCTATTGGAAGAGAAAGGAATTAACAACCGTGATGATGCTAATGA
TGGATCATACATTAATAATAATAAAAAGTATTGTTTATTATTGTTATAAA
ACGATCTTACTCTATGGAACTACAACCCATTCCAAAGACTCCAACAACAG
AATATACCCCACAAACTTGCCATCAAAAGATACAGAAGAAAGTGAGATAA
AAAAAAGGAAAAAGCAAGATGAGCAGGCCAAGAAAGAGGCCCAAGTCAAC
CGCAAACTTGTGGAATTAAACAGGTAGTGCCAGTAAGAACCATATCAAGA
CAAATACTGGAAGAGGAAGCTCAGAAAAAAAACCCAAGAAGAAGCAAGAA
ACACCAAACAGTGATGAATCCAAAACTAAAAAAGACGACGAACGCAGCAC
TACCAATGATCCAAATAAAGAAAATAACAGTTGTCCCAAATAGCATGAAA
GTCCCGTTGGATAAAATTTCAGAAGGCCTTACTGCTTTTGCCTACTATGA
TGATGGCCTATACTATCCTGCCACTGTGAACAAACTCAGCAATACAGTTA
AAAGAAGAAAGAAAGATTCTGGTACACTTGCCACTGTCTTGTATCAAGAT
GGGCTGGTAAAAGTTGCTGATGTTAATTTTTTCAACTTTCTGAAGTCCAC
GCAACCAATAACATCATTTCCAGCAAATGATCTTGGGCACACAACAGGAC
TTAATATGTCATCAAAGAGAACTGTTGTCAAGAAGAGATTAGATCTATTG
GAAGAGAAAGGAATTAACAACCGTGATGATGCTAATGATGGATCATACAT
TAATAATAATAAAAAGTATTGTTTATTATTGTTATAAAACGATCTTACTC
TATGGAACTACAACCCATTCCAAAGACTCCAACAACAGAATATACCCCAC
AAACTTGCCATCAAAAGATACAGAAGAAAGTGAGATAAAAAAAAGGAAAA
AGCAAGATGAGCAGGCCAAGAAAGAGGCCCAAGTCAACCGCAAACTTGTG
GAATTAAACAGGTAGTGCCAGTAAGAACCATATCAAGACAAATACTGGAA
GAGGAAGCTCAGAAAAAAAACCCAAGAAGAAGCAAGAAACACCAAACAGT
GATGAATCCAAAACTAAAAAAGACGACGAACGCAGCACTACCAATGATCC
AAATAAAGAAAATAACAGTTGTCCCAAATAGCATGAAAGTCCCGTTGGAT
AAAATTTCAGAAGGCCTTACTGCTTTTGCCTACTATGATGATGGCCTATA
CTATCCTGCCACTGTGAACAAACTCAGCAATACAGTTAAAAGAAGAAAGA
AAGATTCTGGTACACTTGCCACTGTCTTGTATCAAGATGGGCTGGTAAAA
GTTGCTGATGTTAATTTTTTCAACTTTCTGAAGTCCACGCAACCAATAAC
ATCATTTCCAGCAAATGATCTTGGGCACACAACAGGACTTAATATGTCAT
CAAAGAGAACTGTTGTCAAGAAGAGATTAGATCTATTGGAAGAGAAAGGA
ATTAACAACCGTGATGATGCTAATGATGGATCATACATTAATAATAATAA
AAAGTATTGTTTATTATTGTTATAAAACGATCTTACTCTATGGAACTACA
ACCCATTCCAAAGACTCCAACAACAGAATATACCCCACAAACTTGCCATC
AAAAGATACAGAAGAAAGTGAGATAAAAAAAAGGAAAAAGCAAGATGAGC
AGGCCAAGAAAGAGGCCCAAGTCAACCGCAAACTTGTGGAATTAAACAGG
TAGTGCCAGTAAGAACCATATCAAGACAAATACTGGAAGAGGAAGCTCAG
AAAAAAAACCCAAGAAGAAGCAAGAAACACCAAACAGTGATGAATCCAAA
ACTAAAAAAGACGACGAACGCAGCACTACCAATGATCCAAATAAAGAAAA
TAACAGTTGTCCCAAATAGCATGAAAGTCCCGTTGGATAAAATTTCAGAA
GGCCTTACTGCTTTTGCCTACTATGATGATGGCCTATACTATCCTGCCAC
TGTGAACAAACTCAGCAATACAGTTAAAAGAAGAAAGAAAGATTCTGGTA
CACTTGCCACTGTCTTGTATCAAGATGGGCTGGTAAAAGTTGCTGATGTT
AATTTTTTCAACTTTCTGAAGTCCACGCAACCAATAACATCATTTCCAGC
AAATGATCTTGGGCACACAACAGGACTTAATATGTCATCAAAGAGAACTG
TTGTCAAGAAGAGATTAGATCTATTGGAAGAGAAAGGAATTAACAACCGT
GATGATGCTAATGATGGATCATACATTAATAATAATAAAAAGTATTGTTT
ATTATTGTTATAAAACGATCTTACTCTATGGAACTACAACCCATTCCAAA
GACTCCAACAACAGAATATACCCCACAAACTTGCCATCAAAAGATACAGA
AGAAAGTGAGATAAAAAAAAGGAAAAAGCAAGATGAGCAGGCCAAGAAAG
AGGCCCAAGTCAACCGCAAACTTGTGGAATTAAACAGGTAGTGCCAGTAA
GAACCATATCAAGACAAATACTGGAAGAGGAAGCTCAGAAAAAAAACCCA
AGAAGAAGCAAGAAACACCAAACAGTGATGAATCCAAAACTAAAAAAGAC
GACGAACGCAGCACTACCAATGATCCAAATAAAGAAAATAACAGTTGTCC
CAAATAGCATGAAAGTCCCGTTGGATAAAATTTCAGAAGGCCTTACTGCT
TTTGCCTACTATGATGATGGCCTATACTATCCTGCCACTGTGAACAAACT
CAGCAATACAGTTAAAAGAAGAAAGAAAGATTCTGGTACACTTGCCACTG
TCTTGTATCAAGATGGGCTGGTAAAAGTTGCTGATGTTAATTTTTTCAAC
TTTCTGAAGTCCACGCAACCAATAACATCATTTCCAGCAAATGATCTTGG
GCACACAACAGGACTTAATATGTCATCAAAGAGAACTGTTGTCAAGAAGA
GATTAGATCTATTGGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039712XLOC_039712Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063376-proteinTCONS_00063376-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063376-exon-scaffold_387-1575043694:21636..21779TCONS_00063376-exon-scaffold_387-1575043694:21636..21779Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1575043694:20932..21071TCONS_00063376-exon-scaffold_387-1575043694:20932..21071Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1575043694:20460..20595TCONS_00063376-exon-scaffold_387-1575043694:20460..20595Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1575043694:20009..20053TCONS_00063376-exon-scaffold_387-1575043694:20009..20053Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1575043694:19530..19565TCONS_00063376-exon-scaffold_387-1575043694:19530..19565Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1575043694:19301..19339TCONS_00063376-exon-scaffold_387-1575043694:19301..19339Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1575043694:19089..19124TCONS_00063376-exon-scaffold_387-1575043694:19089..19124Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1575043694:18808..18901TCONS_00063376-exon-scaffold_387-1575043694:18808..18901Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1575043694:18541..18569TCONS_00063376-exon-scaffold_387-1575043694:18541..18569Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1575043694:18359..18409TCONS_00063376-exon-scaffold_387-1575043694:18359..18409Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1575043694:17832..18117TCONS_00063376-exon-scaffold_387-1575043694:17832..18117Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1575043694:17199..17324TCONS_00063376-exon-scaffold_387-1575043694:17199..17324Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1575043694:16902..16971TCONS_00063376-exon-scaffold_387-1575043694:16902..16971Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1510915933:21636..21779TCONS_00063376-exon-scaffold_387-1510915933:21636..21779Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1510915933:20932..21071TCONS_00063376-exon-scaffold_387-1510915933:20932..21071Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1510915933:20460..20595TCONS_00063376-exon-scaffold_387-1510915933:20460..20595Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1510915933:20009..20053TCONS_00063376-exon-scaffold_387-1510915933:20009..20053Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1510915933:19530..19565TCONS_00063376-exon-scaffold_387-1510915933:19530..19565Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1510915933:19301..19339TCONS_00063376-exon-scaffold_387-1510915933:19301..19339Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1510915933:19089..19124TCONS_00063376-exon-scaffold_387-1510915933:19089..19124Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1510915933:18808..18901TCONS_00063376-exon-scaffold_387-1510915933:18808..18901Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1510915933:18541..18569TCONS_00063376-exon-scaffold_387-1510915933:18541..18569Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1510915933:18359..18409TCONS_00063376-exon-scaffold_387-1510915933:18359..18409Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1510915933:17832..18117TCONS_00063376-exon-scaffold_387-1510915933:17832..18117Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1510915933:17199..17324TCONS_00063376-exon-scaffold_387-1510915933:17199..17324Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1510915933:16902..16971TCONS_00063376-exon-scaffold_387-1510915933:16902..16971Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1491911889:21636..21779TCONS_00063376-exon-scaffold_387-1491911889:21636..21779Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1491911889:20932..21071TCONS_00063376-exon-scaffold_387-1491911889:20932..21071Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1491911889:20460..20595TCONS_00063376-exon-scaffold_387-1491911889:20460..20595Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1491911889:20009..20053TCONS_00063376-exon-scaffold_387-1491911889:20009..20053Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1491911889:19530..19565TCONS_00063376-exon-scaffold_387-1491911889:19530..19565Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1491911889:19301..19339TCONS_00063376-exon-scaffold_387-1491911889:19301..19339Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1491911889:19089..19124TCONS_00063376-exon-scaffold_387-1491911889:19089..19124Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1491911889:18808..18901TCONS_00063376-exon-scaffold_387-1491911889:18808..18901Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1491911889:18541..18569TCONS_00063376-exon-scaffold_387-1491911889:18541..18569Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1491911889:18359..18409TCONS_00063376-exon-scaffold_387-1491911889:18359..18409Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1491911889:17832..18117TCONS_00063376-exon-scaffold_387-1491911889:17832..18117Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1491911889:17199..17324TCONS_00063376-exon-scaffold_387-1491911889:17199..17324Clytia hemisphaericaexon
TCONS_00063376-exon-scaffold_387-1491911889:16902..16971TCONS_00063376-exon-scaffold_387-1491911889:16902..16971Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_387supercontigscaffold_387:16902..21779 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.0702551	0.11087	0.312107	0.166966	0.116897	0.253393	0.140542	0.104088	0.184517	0.263481	0.0196925	0.0211331	0	0.0266842	0.0368657	0	0	0.0490653	0	0	0.148938	0.199385	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063376 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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