TCONS_00063428 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063428
Unique NameTCONS_00063428
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3119

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063428 ID=TCONS_00063428|Name=TCONS_00063428|organism=Clytia hemisphaerica|type=transcript|length=3119bp
tgaaactaTACTGCTTATTTAGCCATTATTGTCATCCCATAGTGGATTTT
AAACTTATCATTGACTACAAAAGTGTGTTGTTTGTGCGTGATGAACTGCA
CACTGTCACTACCTATTTGGTGTTTTTGGAATTGATTTGCATCTTTGAAT
ATGGATATAATTGAAGCTGCTCCTGAACCAACTCCAACTCCAACTGCTAA
TAATGATAAAGTCAAACTTTGTGGAAAGAAAAGGAACTGCTCCAAGCCAA
GTGGTCATGCGTCAAGATGTGATTCGAATCGTAAAATCACTAGCCTGTCT
TTTACAACCAGGAACCTCCAGGCAGCCTATCGAAATGTAAAAGAGAAAAT
TATAAGCTTGACATCAACTGCTGGACAAAAAGaggCGAAACTCAAGAACC
TGGATGTTGAAATTTGTAAAAAGGAgcaagaaattttgaataaaagtcAG
CAAAAGGAGGAACTGGAGGAAAACGTGAATGCCTTAGGCAAAGAATCCGA
TAAACTTCGTACACTGTTTGAGCAAACCGAACAAGGGCGTAAAAGGATAG
AGGGTGTACcaacaacaaacaaaatgaTTAATGACAATTTCAGTTCAACT
AGATATCGAAGGCGAAAAAAGACAAAGGCAATGCTCGAATATTACCATGG
TGGAGCTGAAGGGGCAAATTATGGAGCATGGGACTTTCTTCAAAGCAATG
CCTCATCAAATAtgatggaaaaactttttcttaacCACAAGcgtggaaaa
tttttgcaaacATTATATGGAAAATTTAAGGTCAATGATAAAGGAGCTTT
GGACAGAGCCATTGCCTTGAAATATAGCACCTTTCAGTCAAGGCGTAAAT
ATACTTTCCAATGCAAAATTCAGAAATCAATGTATGATCCAAGTAGTGAA
ActtttggcaaaatttcaaTGACCTATGGTGAATACAATTTAGATCTAAA
TACGAAATCGATTAGTCATCAATCTGTTGACAAATTTGTTAAAGGTCTAA
ACATTGGTGAATTACACCAAATTGAAGGATACTCTGGTGTGACCCGTACT
TTGACAGCTCTGACTACTATGATCGTTGACTTAAATCTTAAAGTAAATTC
TCGAAGAGAGAACCTGAAATGGTTCAAGGACAATGTGAATCATTTTATTG
TTGAGTTTTCAGATGATGGTGCCCCAGAATCATCTGAGCGAACAATGACA
ATTGGTACACTTTCTCTCTGGAATTTCGGTAACCGTATTAGAAGTCGTGA
TTACCATTATCTCCTTCACATGTTAAGCGCTTCAGAAAAAGACCGGGTAT
GCGAGTATCTATGGCAACAACATTGCGAGGAAATGAAGTTGATAGAGGGT
AACATCCTCATGATAAACGACACCCAATGCACTTTTGAGTTTGTACCATC
AGCTGATACATCATGGATCTGCTTTGCCGCCAATGTGCTCGGATGTAGTG
CCACATACCCTTCGCCCTTTGCCAATGTTCACAAGGGTAGTTTAACAGAA
ATGGGTGGTTCCATTGGTACAAAAAAGGAAGACCGATGGCAAATACCAAC
CACCAAATCCCGAGATGCTGAGCTGACAACCCTGAATGAATTTCGTTTAA
AAAACAATCACCCTAATCCGGAGGTAGCTCATCAAAAGGAGCTTGATTTC
ATGGCAGAGAATGGCTTGAGACAAATAGGCCCCCCACGAATCGGAGATTT
TGCAGACAGGATAGCACCGGAACCAATGCATCTTGAGATAAATTGTTGGA
AGCATGTGTTGGATGTAATCTACAAAGAAGCAGTCCGACGTgacaaattt
gaagattttattgACGCCCTCAAAAGTCCACAGAAGATTGTTAATGGAAC
AGAACAGAAAACCGGATGTGGGCTTGCTTATATTGCTAAAGAAATTGTGA
AACACCATGATGCAGAAGAAAACAAGCTTAAGCGTTTAGAAGTTCGCCTC
ATTGGATCTCAAGCAATCTCTTTGGCTCAATACAGTTTCAGATTGGTTGA
TTCCCTTTGCTCTCCAGATGAAACACCAACACAACAGATCAAACGTTTAG
CGTTGGCCAAAATTTGCGAGACCCTCCGTGATATTGGCTCACTCATTAAT
CGCATTGATGTGGGTTTCAATAACTATCCTGAAGTAATACGAGACCTTTG
CACAATTTTTTTCAACATGTTTTCCCTATTCTTCGAACAACACTGCCAGC
TAACGGTTTGGACCATGGGTTATGTTATACCGTACCATGTGCAGAATGTC
TTTGAAAAGTATGGGGTTGGTTATGGGATAATGAGTATGCAGGGGAAAGA
GGCAAAGCACGCGGCCTTAAAACAAGAGCTTCGTAATAATACAAATCGAA
GCATTGCTCAAGACGCGACAGGAAAGTGGCATCAAATCGCTCGATCGAAC
TACATTCGGAAATTTTATCTCCCGTATCATTTTCCGGTATCATCAAATTC
ATACCATTCTCATTTTCGACCGAGGAAAGCTTTCCCAACGGATGGAGAAA
TCGAATGTGCTTGTTCCCGCACAATTGATGAGGATTTAACTTCATGCAAA
GTATGTATAGAGAGTATAGAGCTGATGGAATGTGCTAAACTAGCAAAATT
AACTGAGTCAGTGACAAAGAAACTGAAGCCTATCGAATGCGTAACCTGTG
GGTTACGTTTTGCCGACAAGTTAACACTTAAAAACCATGTCGGAACAAAT
CATATTTTAAAGGATGTTCTGAATCCTAAAAAGATGAACGtcgaagaatt
gaaaaatgcaCTGAAGTCTCGCAATATGAATACAACTGGTAAAAAGACTG
AACTTGTAAAAAGGTTGGAAGGTCGACTGACAACCGAAGTGTaacatttt
ttaggcttaaattttcttacgatgttcttaaataCGGTTAGTTCCTTTAC
TTAAGaacttaaaatggcttaaaatatgttaaaaacccttaaaatcagta
ctttattagtaatttttgaaatctgaggctcagctTGTTCTTACTTTGTT
CTTAGGTTtcggccaaatttcagcctcgtgttcttataaaattgttctta
taaaaaaacgtgtatctggGCTTAAACTTCGTTTGCCAGCTGTTTGAGTG
TGTCGATAATTTGACGACg
Run BLAST on NCBI

protein sequence of TCONS_00063428-protein

>TCONS_00063428-protein ID=TCONS_00063428-protein|Name=TCONS_00063428-protein|organism=Clytia hemisphaerica|type=polypeptide|length=897bp
MDIIEAAPEPTPTPTANNDKVKLCGKKRNCSKPSGHASRCDSNRKITSLS
FTTRNLQAAYRNVKEKIISLTSTAGQKEAKLKNLDVEICKKEQEILNKSQ
QKEELEENVNALGKESDKLRTLFEQTEQGRKRIEGVPTTNKMINDNFSST
RYRRRKKTKAMLEYYHGGAEGANYGAWDFLQSNASSNMMEKLFLNHKRGK
FLQTLYGKFKVNDKGALDRAIALKYSTFQSRRKYTFQCKIQKSMYDPSSE
TFGKISMTYGEYNLDLNTKSISHQSVDKFVKGLNIGELHQIEGYSGVTRT
LTALTTMIVDLNLKVNSRRENLKWFKDNVNHFIVEFSDDGAPESSERTMT
IGTLSLWNFGNRIRSRDYHYLLHMLSASEKDRVCEYLWQQHCEEMKLIEG
NILMINDTQCTFEFVPSADTSWICFAANVLGCSATYPSPFANVHKGSLTE
MGGSIGTKKEDRWQIPTTKSRDAELTTLNEFRLKNNHPNPEVAHQKELDF
MAENGLRQIGPPRIGDFADRIAPEPMHLEINCWKHVLDVIYKEAVRRDKF
EDFIDALKSPQKIVNGTEQKTGCGLAYIAKEIVKHHDAEENKLKRLEVRL
IGSQAISLAQYSFRLVDSLCSPDETPTQQIKRLALAKICETLRDIGSLIN
RIDVGFNNYPEVIRDLCTIFFNMFSLFFEQHCQLTVWTMGYVIPYHVQNV
FEKYGVGYGIMSMQGKEAKHAALKQELRNNTNRSIAQDATGKWHQIARSN
YIRKFYLPYHFPVSSNSYHSHFRPRKAFPTDGEIECACSRTIDEDLTSCK
VCIESIELMECAKLAKLTESVTKKLKPIECVTCGLRFADKLTLKNHVGTN
HILKDVLNPKKMNVEELKNALKSRNMNTTGKKTELVKRLEGRLTTEV
Run BLAST on NCBI

transcript from alignment at scaffold_389:69470..74330-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063428 ID=TCONS_00063428|Name=TCONS_00063428|organism=Clytia hemisphaerica|type=transcript|length=4861bp|location=Sequence derived from alignment at scaffold_389:69470..74330- (Clytia hemisphaerica)
TGAAACTATACTGCTTATTTAGCCATTATTGTCATCCCATAGTGGATTTT AAACTTATCATTGACTACAAAAGTGTGTTGTTTGTGCGTGATGAACTGCA CACTGTCACTACCTATTTGGTGTTTTTGGAATTGATTTGCATCTTTGAAT ATGGATATAATTGAAGCTGCTCCTGAACCAACTCCAACTCCAACTGCTAA TAATGATAAAGTCAAGTAAGTAAAGTGTTTGAATGCTATTATCTTTCTCG TGTATATAATAAATAATGTTATTTTTATATGTTTCAAAAAATCATTTCTT TTTGCACCCTATAGACGTTATTTTAAAGAGGATGTTCTGTGGAATAAAAA AGTAGTCCATCAGTTATTATGTAATGAAAAATACCTCAAAGCAGATGGTC GGCCGCAGTGACCACGCTGAGATTTTTTTCTCTACGTGGCTGTTTATATA TATATATAAATATTCAACAGGACGTCCTCTTTGTAAAAACGTCAATTCAA AGTAAATGTTTTCAAAATTTATGTTTTTTAAGTCTAATCACGAAATTGAT TTTATAATTTTTCTTCCTCGACAGACTTTGTGGAAAGAAAAGGAACTGCT CCAAGCCAAGTGGTCATGCGTCAAGATGTGATTCGAATCGTAAAATCACT AGCCTGTCTTTTACAACCAGGAACCTCCAGGCAGCCTATCGAAATGTAAA AGAGAAAATTATAAGCTTGACATCAACTGCTGGACAAAAAGGTAAAAAAT TATTTCCCAAAAGCATTTGTCATATTGAATTAGAAATTTTTTAATTATAA ATTCTTCTTTGTTGGTAAAATGCCTTCACTTTTCCTTAATCACTGTTTCA GATTTGAAAAGCTTCTGATGTGCTCCTCTTTGAGGTTTTATTACCTTTAC ACCGAATAGATGATTCCTTGTTATTTTAAAAGATTTTGATTGGTGCGCAC TAGTTTGGATTCTGGACGTGTACGTAATGAATAGTCCTTTAGGCAATTGC GACGATCTATTAAATAAATAATTCCACCGGCAATAATTATTCGCATACCT ACTTCCACCAGCTTAAATTATGATACCTCCATACTCCAATGGATGCAAGT GAAACCAACGTGAAATTTCATATTACCTACATATAAGTTTTGTTCAAATT GGCAGGCTAACAACTCTCTCTTAATAACATGCGGTAATGTTGCAAATTTT CCTGTGTGGCGTGCTATGAAGTATTTATACAACTTTAGGTTCTAATTTTC CGTAATACAGAACAAATGATTTCCAGCCCGGAATTAATGTGCGGAACGAT GCAAATAATTATTGCTGGTGGAATACTTATTCAATAGACCCTCGCGATCA CCTAAAGGAGTATTGCGTCCCTTTATTCTATAAGTAAGATTAATACTGAA GTTTTATAATTTTTTTTAGAGGCGAAACTCAAGAACCTGGATGTTGAAAT TTGTAAAAAGGAGCAAGAAATTTTGAATAAAAGTCAGCAAAAGGAGGAAC TGGAGGAAAACGTGAATGCCTTAGGCAAAGAATCCGATAAACTTCGTACA CTGTTTGAGCAAACCGAACAAGGGCGTAAAAGGATAGAGGGTGTACCAAC AACAAACAAAATGATTAATGACAATTTCAGTTCAACTAGATATCGAAGGC GAAAAAAGACAAAGGCAATGCTCGAATATTACCATGGTGGAGCTGAAGGG GCAAATTATGGAGCATGGGACTTTCTTCAAAGCAATGCCTCATCAAATAT GATGGAAAAACTTTTTCTTAACCACAAGCGTGGAAAATTTTTGCAAACAT TATATGGAAAATTTAAGGTCAATGATAAAGGAGCTTTGGACAGAGCCATT GCCTTGAAATATAGCACCTTTCAGTCAAGGCGTAAATATACTTTCCAATG CAAAATTCAGAAATCAATGTATGATCCAAGTAGTGAAACTTTTGGCAAAA TTTCAATGACCTATGGTGAATACAATTTAGATCTAAATACGAAATCGATT AGTCATCAATCTGTTGACAAATTTGTTAAAGGTCTAAACATTGGTGAATT ACACCAAATTGAAGGATACTCTGGTGTGACCCGTACTTTGACAGCTCTGA CTACTATGATCGTTGACTTAAATCTTAAAGTAAATTCTCGAAGAGAGAAC CTGAAATGGTTCAAGGACAATGTGAATCATTTTATTGTTGAGTTTTCAGA TGATGGTGCCCCAGAATCATCTGAGCGAACAATGACAATTGGTACACTTT CTCTCTGGAATTTCGGTAACCGTATTAGAAGTCGTGATTACCATTATCTC CTTCACATGTTAAGCGCTTCAGAAAAAGACCGGGTATGCGAGTATCTATG GCAACAACATTGCGAGGAAATGAAGTTGATAGAGGGTAACATCCTCATGA TAAACGACACCCAATGCACTTTTGAGTTTGTACCATCAGCTGATACATCA TGGATCTGCTTTGCCGCCAATGTGCTCGGATGTAGTGCCACATACCCTTC GCCCTTTGCCAATGTTCACAAGGGTAGTTTAACAGAAATGGGTGGTTCCA TTGGTACAAAAAAGGAAGACCGATGGCAAATACCAACCACCAAATCCCGA GATGCTGAGCTGACAACCCTGAATGAATTTCGTTTAAAAAACAATCACCC TAATCCGGAGGTAGCTCATCAAAAGGAGCTTGATTTCATGGCAGAGAATG GCTTGAGACAAATAGGCCCCCCACGAATCGGAGATTTTGCAGACAGGATA GCACCGGAACCAATGCATCTTGAGATAAATTGTTGGAAGCATGTGTTGGA TGTAATCTACAAAGAAGCAGTCCGACGTGACAAATTTGAAGATTTTATTG ACGCCCTCAAAAGTCCACAGAAGATTGTTAATGGAACAGAACAGAAAACC GGATGTGGGCTTGCTTATATTGCTAAAGAAATTGTGAAACACCATGATGC AGAAGAAAACAAGCTTAAGCGTTTAGAAGTTCGCCTCATTGGATCTCAAG CAATCTCTTTGGCTCAATACAGGTAACTTAATTTAATAACTTTAATCTAG TGTCTTATGAAGTTTTTTTATGGTGTAAAAACTGAAAAGTAGGTTTTAGG AAATTGACCTTAGATGAATTTGTGTCAACCATTCTTTACGTAAATGTTAA TGTTTTTTCTTAAAAGGGAGTAATTTAAACTACCCGAAAACGCATGAGAG GTCCAGAACAGAAGAAAATTCTTCTGACAGAATCATCTCTTCGCTTATCA TTTATCTATTACTTATTGTCTTATAGACAGTAATAGATTAGCTTTGTCAT AGCTATGTTTTAGATTGCACCCCTTTTTGATAGGAGGGATGCCAAATTTT TGAAGGGCCTTTGCAGGGTGTACTAAGATTTGCCAAAAACTAGGGGGAAT CAAATAAGAAAGGGGGGGGTCGGAAAGTTTGGTTTTAACTTTATCGTATA CAAATGGTCACTGTAGTCTGTATTAAAGTAAAAATGTGTACCATCAAAAT TGTTGTTAGAAATGCTAGTTATAATTTTTATTGTAAAATTTTTGTCTTCA ACTGTAAACATTTGGTAGTCTTTGATCACTTTGGTAGCGCATAGAGCGAG TTTGATTTCTGCAAAAAGGAGGGAGGGTAAAGGTTTCATTTCAGAAGGGG ATGGGTATATAGGGGGATAGAACAAGCCTAGTGGGTTCAAACCCCTCTGC AAACTATTTATGTATGGTTTTATTCAGTTTCAGATTGGTTGATTCCCTTT GCTCTCCAGATGAAACACCAACACAACAGATCAAACGTTTAGCGTTGGCC AAAATTTGCGAGACCCTCCGTGATATTGGCTCACTCATTAATCGCATTGA TGTGGGTTTCAATAACTATCCTGAAGTAATACGAGACCTTTGCACAATTT TTTTCAACATGTTTTCCCTATTCTTCGAACAACACTGCCAGCTAACGGTT TGGACCATGGGTTATGTTATACCGTACCATGTGCAGAATGTCTTTGAAAA GTATGGGGTTGGTTATGGGATAATGAGTATGCAGGGGAAAGAGGCAAAGC ACGCGGCCTTAAAACAAGAGCTTCGTAATAATACAAATCGAAGCATTGCT CAAGACGCGACAGGAAAGTGGCATCAAATCGCTCGATCGAACTACATTCG GAAATTTTATCTCCCGTATCATTTTCCGGTATCATCAAATTCATACCATT CTCATTTTCGACCGAGGAAAGCTTTCCCAACGGATGGAGAAATCGAATGT GCTTGTTCCCGCACAATTGATGAGGATTTAACTTCATGCAAAGTATGTAT AGAGAGTATAGAGCTGATGGAATGTGCTAAACTAGCAAAATTAACTGAGT CAGTGACAAAGAAACTGAAGCCTATCGAATGCGTAACCTGTGGGTTACGT TTTGCCGACAAGTTAACACTTAAAAACCATGTCGGAACAAATCATATTTT AAAGGATGTTCTGAATCCTAAAAAGATGAACGTCGAAGAATTGAAAAATG CACTGAAGTCTCGCAATATGAATACAACTGGTAAAAAGACTGAACTTGTA AAAAGGTTGGAAGGTCGACTGACAACCGAAGTGTAACATTTTTTAGGCTT AAATTTTCTTACGATGTTCTTAAATACGGTTAGTTCCTTTACTTAAGAAC TTAAAATGGCTTAAAATATGTTAAAAACCCTTAAAATCAGTACTTTATTA GTAATTTTTGAAATCTGAGGCTCAGCTTGTTCTTACTTTGTTCTTAGGTT TCGGCCAAATTTCAGCCTCGTGTTCTTATAAAATTGTTCTTATAAAAAAA CGTGTATCTGGGCTTAAACTTCGTTTGCCAGCTGTTTGAGTGTGTCGATA ATTTGACGACG

Coding sequence (CDS) from alignment at scaffold_389:69470..74330-

>TCONS_00063428 ID=TCONS_00063428|Name=TCONS_00063428|organism=Clytia hemisphaerica|type=CDS|length=10776bp|location=Sequence derived from alignment at scaffold_389:69470..74330- (Clytia hemisphaerica)
TTTCAGATTGGTTGATTCCCTTTGCTCTCCAGATGAAACACCAACACAAC
AGATCAAACGTTTAGCGTTGGCCAAAATTTGCGAGACCCTCCGTGATATT
GGCTCACTCATTAATCGCATTGATGTGGGTTTCAATAACTATCCTGAAGT
AATACGAGACCTTTGCACAATTTTTTTCAACATGTTTTCCCTATTCTTCG
AACAACACTGCCAGCTAACGGTTTGGACCATGGGTTATGTTATACCGTAC
CATGTGCAGAATGTCTTTGAAAAGTATGGGGTTGGTTATGGGATAATGAG
TATGCAGGGGAAAGAGGCAAAGCACGCGGCCTTAAAACAAGAGCTTCGTA
ATAATACAAATCGAAGCATTGCTCAAGACGCGACAGGAAAGTGGCATCAA
ATCGCTCGATCGAACTACATTCGGAAATTTTATCTCCCGTATCATTTTCC
GGTATCATCAAATTCATACCATTCTCATTTTCGACCGAGGAAAGCTTTCC
CAACGGATGGAGAAATCGAATGTGCTTGTTCCCGCACAATTGATGAGGAT
TTAACTTCATGCAAAGTATGTATAGAGAGTATAGAGCTGATGGAATGTGC
TAAACTAGCAAAATTAACTGAGTCAGTGACAAAGAAACTGAAGCCTATCG
AATGCGTAACCTGTGGGTTACGTTTTGCCGACAAGTTAACACTTAAAAAC
CATGTCGGAACAAATCATATTTTAAAGGATGTTCTGAATCCTAAAAAGAT
GAACGTCGAAGAATTGAAAAATGCACTGAAGTCTCGCAATATGAATACAA
CTGGTAAAAAGACTGAACTTGTAAAAAGGTTGGAAGGTCGACTGACAACC
GAAGTGTAAAGGCGAAACTCAAGAACCTGGATGTTGAAATTTGTAAAAAG
GAGCAAGAAATTTTGAATAAAAGTCAGCAAAAGGAGGAACTGGAGGAAAA
CGTGAATGCCTTAGGCAAAGAATCCGATAAACTTCGTACACTGTTTGAGC
AAACCGAACAAGGGCGTAAAAGGATAGAGGGTGTACCAACAACAAACAAA
ATGATTAATGACAATTTCAGTTCAACTAGATATCGAAGGCGAAAAAAGAC
AAAGGCAATGCTCGAATATTACCATGGTGGAGCTGAAGGGGCAAATTATG
GAGCATGGGACTTTCTTCAAAGCAATGCCTCATCAAATATGATGGAAAAA
CTTTTTCTTAACCACAAGCGTGGAAAATTTTTGCAAACATTATATGGAAA
ATTTAAGGTCAATGATAAAGGAGCTTTGGACAGAGCCATTGCCTTGAAAT
ATAGCACCTTTCAGTCAAGGCGTAAATATACTTTCCAATGCAAAATTCAG
AAATCAATGTATGATCCAAGTAGTGAAACTTTTGGCAAAATTTCAATGAC
CTATGGTGAATACAATTTAGATCTAAATACGAAATCGATTAGTCATCAAT
CTGTTGACAAATTTGTTAAAGGTCTAAACATTGGTGAATTACACCAAATT
GAAGGATACTCTGGTGTGACCCGTACTTTGACAGCTCTGACTACTATGAT
CGTTGACTTAAATCTTAAAGTAAATTCTCGAAGAGAGAACCTGAAATGGT
TCAAGGACAATGTGAATCATTTTATTGTTGAGTTTTCAGATGATGGTGCC
CCAGAATCATCTGAGCGAACAATGACAATTGGTACACTTTCTCTCTGGAA
TTTCGGTAACCGTATTAGAAGTCGTGATTACCATTATCTCCTTCACATGT
TAAGCGCTTCAGAAAAAGACCGGGTATGCGAGTATCTATGGCAACAACAT
TGCGAGGAAATGAAGTTGATAGAGGGTAACATCCTCATGATAAACGACAC
CCAATGCACTTTTGAGTTTGTACCATCAGCTGATACATCATGGATCTGCT
TTGCCGCCAATGTGCTCGGATGTAGTGCCACATACCCTTCGCCCTTTGCC
AATGTTCACAAGGGTAGTTTAACAGAAATGGGTGGTTCCATTGGTACAAA
AAAGGAAGACCGATGGCAAATACCAACCACCAAATCCCGAGATGCTGAGC
TGACAACCCTGAATGAATTTCGTTTAAAAAACAATCACCCTAATCCGGAG
GTAGCTCATCAAAAGGAGCTTGATTTCATGGCAGAGAATGGCTTGAGACA
AATAGGCCCCCCACGAATCGGAGATTTTGCAGACAGGATAGCACCGGAAC
CAATGCATCTTGAGATAAATTGTTGGAAGCATGTGTTGGATGTAATCTAC
AAAGAAGCAGTCCGACGTGACAAATTTGAAGATTTTATTGACGCCCTCAA
AAGTCCACAGAAGATTGTTAATGGAACAGAACAGAAAACCGGATGTGGGC
TTGCTTATATTGCTAAAGAAATTGTGAAACACCATGATGCAGAAGAAAAC
AAGCTTAAGCGTTTAGAAGTTCGCCTCATTGGATCTCAAGCAATCTCTTT
GGCTCAATACAGACTTTGTGGAAAGAAAAGGAACTGCTCCAAGCCAAGTG
GTCATGCGTCAAGATGTGATTCGAATCGTAAAATCACTAGCCTGTCTTTT
ACAACCAGGAACCTCCAGGCAGCCTATCGAAATGTAAAAGAGAAAATTAT
AAGCTTGACATCAACTGCTGGACAAAAAGATGGATATAATTGAAGCTGCT
CCTGAACCAACTCCAACTCCAACTGCTAATAATGATAAAGTCAATTTCAG
ATTGGTTGATTCCCTTTGCTCTCCAGATGAAACACCAACACAACAGATCA
AACGTTTAGCGTTGGCCAAAATTTGCGAGACCCTCCGTGATATTGGCTCA
CTCATTAATCGCATTGATGTGGGTTTCAATAACTATCCTGAAGTAATACG
AGACCTTTGCACAATTTTTTTCAACATGTTTTCCCTATTCTTCGAACAAC
ACTGCCAGCTAACGGTTTGGACCATGGGTTATGTTATACCGTACCATGTG
CAGAATGTCTTTGAAAAGTATGGGGTTGGTTATGGGATAATGAGTATGCA
GGGGAAAGAGGCAAAGCACGCGGCCTTAAAACAAGAGCTTCGTAATAATA
CAAATCGAAGCATTGCTCAAGACGCGACAGGAAAGTGGCATCAAATCGCT
CGATCGAACTACATTCGGAAATTTTATCTCCCGTATCATTTTCCGGTATC
ATCAAATTCATACCATTCTCATTTTCGACCGAGGAAAGCTTTCCCAACGG
ATGGAGAAATCGAATGTGCTTGTTCCCGCACAATTGATGAGGATTTAACT
TCATGCAAAGTATGTATAGAGAGTATAGAGCTGATGGAATGTGCTAAACT
AGCAAAATTAACTGAGTCAGTGACAAAGAAACTGAAGCCTATCGAATGCG
TAACCTGTGGGTTACGTTTTGCCGACAAGTTAACACTTAAAAACCATGTC
GGAACAAATCATATTTTAAAGGATGTTCTGAATCCTAAAAAGATGAACGT
CGAAGAATTGAAAAATGCACTGAAGTCTCGCAATATGAATACAACTGGTA
AAAAGACTGAACTTGTAAAAAGGTTGGAAGGTCGACTGACAACCGAAGTG
TAAAGGCGAAACTCAAGAACCTGGATGTTGAAATTTGTAAAAAGGAGCAA
GAAATTTTGAATAAAAGTCAGCAAAAGGAGGAACTGGAGGAAAACGTGAA
TGCCTTAGGCAAAGAATCCGATAAACTTCGTACACTGTTTGAGCAAACCG
AACAAGGGCGTAAAAGGATAGAGGGTGTACCAACAACAAACAAAATGATT
AATGACAATTTCAGTTCAACTAGATATCGAAGGCGAAAAAAGACAAAGGC
AATGCTCGAATATTACCATGGTGGAGCTGAAGGGGCAAATTATGGAGCAT
GGGACTTTCTTCAAAGCAATGCCTCATCAAATATGATGGAAAAACTTTTT
CTTAACCACAAGCGTGGAAAATTTTTGCAAACATTATATGGAAAATTTAA
GGTCAATGATAAAGGAGCTTTGGACAGAGCCATTGCCTTGAAATATAGCA
CCTTTCAGTCAAGGCGTAAATATACTTTCCAATGCAAAATTCAGAAATCA
ATGTATGATCCAAGTAGTGAAACTTTTGGCAAAATTTCAATGACCTATGG
TGAATACAATTTAGATCTAAATACGAAATCGATTAGTCATCAATCTGTTG
ACAAATTTGTTAAAGGTCTAAACATTGGTGAATTACACCAAATTGAAGGA
TACTCTGGTGTGACCCGTACTTTGACAGCTCTGACTACTATGATCGTTGA
CTTAAATCTTAAAGTAAATTCTCGAAGAGAGAACCTGAAATGGTTCAAGG
ACAATGTGAATCATTTTATTGTTGAGTTTTCAGATGATGGTGCCCCAGAA
TCATCTGAGCGAACAATGACAATTGGTACACTTTCTCTCTGGAATTTCGG
TAACCGTATTAGAAGTCGTGATTACCATTATCTCCTTCACATGTTAAGCG
CTTCAGAAAAAGACCGGGTATGCGAGTATCTATGGCAACAACATTGCGAG
GAAATGAAGTTGATAGAGGGTAACATCCTCATGATAAACGACACCCAATG
CACTTTTGAGTTTGTACCATCAGCTGATACATCATGGATCTGCTTTGCCG
CCAATGTGCTCGGATGTAGTGCCACATACCCTTCGCCCTTTGCCAATGTT
CACAAGGGTAGTTTAACAGAAATGGGTGGTTCCATTGGTACAAAAAAGGA
AGACCGATGGCAAATACCAACCACCAAATCCCGAGATGCTGAGCTGACAA
CCCTGAATGAATTTCGTTTAAAAAACAATCACCCTAATCCGGAGGTAGCT
CATCAAAAGGAGCTTGATTTCATGGCAGAGAATGGCTTGAGACAAATAGG
CCCCCCACGAATCGGAGATTTTGCAGACAGGATAGCACCGGAACCAATGC
ATCTTGAGATAAATTGTTGGAAGCATGTGTTGGATGTAATCTACAAAGAA
GCAGTCCGACGTGACAAATTTGAAGATTTTATTGACGCCCTCAAAAGTCC
ACAGAAGATTGTTAATGGAACAGAACAGAAAACCGGATGTGGGCTTGCTT
ATATTGCTAAAGAAATTGTGAAACACCATGATGCAGAAGAAAACAAGCTT
AAGCGTTTAGAAGTTCGCCTCATTGGATCTCAAGCAATCTCTTTGGCTCA
ATACAGACTTTGTGGAAAGAAAAGGAACTGCTCCAAGCCAAGTGGTCATG
CGTCAAGATGTGATTCGAATCGTAAAATCACTAGCCTGTCTTTTACAACC
AGGAACCTCCAGGCAGCCTATCGAAATGTAAAAGAGAAAATTATAAGCTT
GACATCAACTGCTGGACAAAAAGATGGATATAATTGAAGCTGCTCCTGAA
CCAACTCCAACTCCAACTGCTAATAATGATAAAGTCAATTTCAGATTGGT
TGATTCCCTTTGCTCTCCAGATGAAACACCAACACAACAGATCAAACGTT
TAGCGTTGGCCAAAATTTGCGAGACCCTCCGTGATATTGGCTCACTCATT
AATCGCATTGATGTGGGTTTCAATAACTATCCTGAAGTAATACGAGACCT
TTGCACAATTTTTTTCAACATGTTTTCCCTATTCTTCGAACAACACTGCC
AGCTAACGGTTTGGACCATGGGTTATGTTATACCGTACCATGTGCAGAAT
GTCTTTGAAAAGTATGGGGTTGGTTATGGGATAATGAGTATGCAGGGGAA
AGAGGCAAAGCACGCGGCCTTAAAACAAGAGCTTCGTAATAATACAAATC
GAAGCATTGCTCAAGACGCGACAGGAAAGTGGCATCAAATCGCTCGATCG
AACTACATTCGGAAATTTTATCTCCCGTATCATTTTCCGGTATCATCAAA
TTCATACCATTCTCATTTTCGACCGAGGAAAGCTTTCCCAACGGATGGAG
AAATCGAATGTGCTTGTTCCCGCACAATTGATGAGGATTTAACTTCATGC
AAAGTATGTATAGAGAGTATAGAGCTGATGGAATGTGCTAAACTAGCAAA
ATTAACTGAGTCAGTGACAAAGAAACTGAAGCCTATCGAATGCGTAACCT
GTGGGTTACGTTTTGCCGACAAGTTAACACTTAAAAACCATGTCGGAACA
AATCATATTTTAAAGGATGTTCTGAATCCTAAAAAGATGAACGTCGAAGA
ATTGAAAAATGCACTGAAGTCTCGCAATATGAATACAACTGGTAAAAAGA
CTGAACTTGTAAAAAGGTTGGAAGGTCGACTGACAACCGAAGTGTAAAGG
CGAAACTCAAGAACCTGGATGTTGAAATTTGTAAAAAGGAGCAAGAAATT
TTGAATAAAAGTCAGCAAAAGGAGGAACTGGAGGAAAACGTGAATGCCTT
AGGCAAAGAATCCGATAAACTTCGTACACTGTTTGAGCAAACCGAACAAG
GGCGTAAAAGGATAGAGGGTGTACCAACAACAAACAAAATGATTAATGAC
AATTTCAGTTCAACTAGATATCGAAGGCGAAAAAAGACAAAGGCAATGCT
CGAATATTACCATGGTGGAGCTGAAGGGGCAAATTATGGAGCATGGGACT
TTCTTCAAAGCAATGCCTCATCAAATATGATGGAAAAACTTTTTCTTAAC
CACAAGCGTGGAAAATTTTTGCAAACATTATATGGAAAATTTAAGGTCAA
TGATAAAGGAGCTTTGGACAGAGCCATTGCCTTGAAATATAGCACCTTTC
AGTCAAGGCGTAAATATACTTTCCAATGCAAAATTCAGAAATCAATGTAT
GATCCAAGTAGTGAAACTTTTGGCAAAATTTCAATGACCTATGGTGAATA
CAATTTAGATCTAAATACGAAATCGATTAGTCATCAATCTGTTGACAAAT
TTGTTAAAGGTCTAAACATTGGTGAATTACACCAAATTGAAGGATACTCT
GGTGTGACCCGTACTTTGACAGCTCTGACTACTATGATCGTTGACTTAAA
TCTTAAAGTAAATTCTCGAAGAGAGAACCTGAAATGGTTCAAGGACAATG
TGAATCATTTTATTGTTGAGTTTTCAGATGATGGTGCCCCAGAATCATCT
GAGCGAACAATGACAATTGGTACACTTTCTCTCTGGAATTTCGGTAACCG
TATTAGAAGTCGTGATTACCATTATCTCCTTCACATGTTAAGCGCTTCAG
AAAAAGACCGGGTATGCGAGTATCTATGGCAACAACATTGCGAGGAAATG
AAGTTGATAGAGGGTAACATCCTCATGATAAACGACACCCAATGCACTTT
TGAGTTTGTACCATCAGCTGATACATCATGGATCTGCTTTGCCGCCAATG
TGCTCGGATGTAGTGCCACATACCCTTCGCCCTTTGCCAATGTTCACAAG
GGTAGTTTAACAGAAATGGGTGGTTCCATTGGTACAAAAAAGGAAGACCG
ATGGCAAATACCAACCACCAAATCCCGAGATGCTGAGCTGACAACCCTGA
ATGAATTTCGTTTAAAAAACAATCACCCTAATCCGGAGGTAGCTCATCAA
AAGGAGCTTGATTTCATGGCAGAGAATGGCTTGAGACAAATAGGCCCCCC
ACGAATCGGAGATTTTGCAGACAGGATAGCACCGGAACCAATGCATCTTG
AGATAAATTGTTGGAAGCATGTGTTGGATGTAATCTACAAAGAAGCAGTC
CGACGTGACAAATTTGAAGATTTTATTGACGCCCTCAAAAGTCCACAGAA
GATTGTTAATGGAACAGAACAGAAAACCGGATGTGGGCTTGCTTATATTG
CTAAAGAAATTGTGAAACACCATGATGCAGAAGAAAACAAGCTTAAGCGT
TTAGAAGTTCGCCTCATTGGATCTCAAGCAATCTCTTTGGCTCAATACAG
ACTTTGTGGAAAGAAAAGGAACTGCTCCAAGCCAAGTGGTCATGCGTCAA
GATGTGATTCGAATCGTAAAATCACTAGCCTGTCTTTTACAACCAGGAAC
CTCCAGGCAGCCTATCGAAATGTAAAAGAGAAAATTATAAGCTTGACATC
AACTGCTGGACAAAAAGATGGATATAATTGAAGCTGCTCCTGAACCAACT
CCAACTCCAACTGCTAATAATGATAAAGTCAATTTCAGATTGGTTGATTC
CCTTTGCTCTCCAGATGAAACACCAACACAACAGATCAAACGTTTAGCGT
TGGCCAAAATTTGCGAGACCCTCCGTGATATTGGCTCACTCATTAATCGC
ATTGATGTGGGTTTCAATAACTATCCTGAAGTAATACGAGACCTTTGCAC
AATTTTTTTCAACATGTTTTCCCTATTCTTCGAACAACACTGCCAGCTAA
CGGTTTGGACCATGGGTTATGTTATACCGTACCATGTGCAGAATGTCTTT
GAAAAGTATGGGGTTGGTTATGGGATAATGAGTATGCAGGGGAAAGAGGC
AAAGCACGCGGCCTTAAAACAAGAGCTTCGTAATAATACAAATCGAAGCA
TTGCTCAAGACGCGACAGGAAAGTGGCATCAAATCGCTCGATCGAACTAC
ATTCGGAAATTTTATCTCCCGTATCATTTTCCGGTATCATCAAATTCATA
CCATTCTCATTTTCGACCGAGGAAAGCTTTCCCAACGGATGGAGAAATCG
AATGTGCTTGTTCCCGCACAATTGATGAGGATTTAACTTCATGCAAAGTA
TGTATAGAGAGTATAGAGCTGATGGAATGTGCTAAACTAGCAAAATTAAC
TGAGTCAGTGACAAAGAAACTGAAGCCTATCGAATGCGTAACCTGTGGGT
TACGTTTTGCCGACAAGTTAACACTTAAAAACCATGTCGGAACAAATCAT
ATTTTAAAGGATGTTCTGAATCCTAAAAAGATGAACGTCGAAGAATTGAA
AAATGCACTGAAGTCTCGCAATATGAATACAACTGGTAAAAAGACTGAAC
TTGTAAAAAGGTTGGAAGGTCGACTGACAACCGAAGTGTAAAGGCGAAAC
TCAAGAACCTGGATGTTGAAATTTGTAAAAAGGAGCAAGAAATTTTGAAT
AAAAGTCAGCAAAAGGAGGAACTGGAGGAAAACGTGAATGCCTTAGGCAA
AGAATCCGATAAACTTCGTACACTGTTTGAGCAAACCGAACAAGGGCGTA
AAAGGATAGAGGGTGTACCAACAACAAACAAAATGATTAATGACAATTTC
AGTTCAACTAGATATCGAAGGCGAAAAAAGACAAAGGCAATGCTCGAATA
TTACCATGGTGGAGCTGAAGGGGCAAATTATGGAGCATGGGACTTTCTTC
AAAGCAATGCCTCATCAAATATGATGGAAAAACTTTTTCTTAACCACAAG
CGTGGAAAATTTTTGCAAACATTATATGGAAAATTTAAGGTCAATGATAA
AGGAGCTTTGGACAGAGCCATTGCCTTGAAATATAGCACCTTTCAGTCAA
GGCGTAAATATACTTTCCAATGCAAAATTCAGAAATCAATGTATGATCCA
AGTAGTGAAACTTTTGGCAAAATTTCAATGACCTATGGTGAATACAATTT
AGATCTAAATACGAAATCGATTAGTCATCAATCTGTTGACAAATTTGTTA
AAGGTCTAAACATTGGTGAATTACACCAAATTGAAGGATACTCTGGTGTG
ACCCGTACTTTGACAGCTCTGACTACTATGATCGTTGACTTAAATCTTAA
AGTAAATTCTCGAAGAGAGAACCTGAAATGGTTCAAGGACAATGTGAATC
ATTTTATTGTTGAGTTTTCAGATGATGGTGCCCCAGAATCATCTGAGCGA
ACAATGACAATTGGTACACTTTCTCTCTGGAATTTCGGTAACCGTATTAG
AAGTCGTGATTACCATTATCTCCTTCACATGTTAAGCGCTTCAGAAAAAG
ACCGGGTATGCGAGTATCTATGGCAACAACATTGCGAGGAAATGAAGTTG
ATAGAGGGTAACATCCTCATGATAAACGACACCCAATGCACTTTTGAGTT
TGTACCATCAGCTGATACATCATGGATCTGCTTTGCCGCCAATGTGCTCG
GATGTAGTGCCACATACCCTTCGCCCTTTGCCAATGTTCACAAGGGTAGT
TTAACAGAAATGGGTGGTTCCATTGGTACAAAAAAGGAAGACCGATGGCA
AATACCAACCACCAAATCCCGAGATGCTGAGCTGACAACCCTGAATGAAT
TTCGTTTAAAAAACAATCACCCTAATCCGGAGGTAGCTCATCAAAAGGAG
CTTGATTTCATGGCAGAGAATGGCTTGAGACAAATAGGCCCCCCACGAAT
CGGAGATTTTGCAGACAGGATAGCACCGGAACCAATGCATCTTGAGATAA
ATTGTTGGAAGCATGTGTTGGATGTAATCTACAAAGAAGCAGTCCGACGT
GACAAATTTGAAGATTTTATTGACGCCCTCAAAAGTCCACAGAAGATTGT
TAATGGAACAGAACAGAAAACCGGATGTGGGCTTGCTTATATTGCTAAAG
AAATTGTGAAACACCATGATGCAGAAGAAAACAAGCTTAAGCGTTTAGAA
GTTCGCCTCATTGGATCTCAAGCAATCTCTTTGGCTCAATACAGACTTTG
TGGAAAGAAAAGGAACTGCTCCAAGCCAAGTGGTCATGCGTCAAGATGTG
ATTCGAATCGTAAAATCACTAGCCTGTCTTTTACAACCAGGAACCTCCAG
GCAGCCTATCGAAATGTAAAAGAGAAAATTATAAGCTTGACATCAACTGC
TGGACAAAAAGATGGATATAATTGAAGCTGCTCCTGAACCAACTCCAACT
CCAACTGCTAATAATGATAAAGTCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039754XLOC_039754Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063428-exon-scaffold_389-1575043694:74116..74330TCONS_00063428-exon-scaffold_389-1575043694:74116..74330Clytia hemisphaericaexon
TCONS_00063428-exon-scaffold_389-1575043694:73590..73756TCONS_00063428-exon-scaffold_389-1575043694:73590..73756Clytia hemisphaericaexon
TCONS_00063428-exon-scaffold_389-1575043694:71309..72911TCONS_00063428-exon-scaffold_389-1575043694:71309..72911Clytia hemisphaericaexon
TCONS_00063428-exon-scaffold_389-1575043694:69470..70603TCONS_00063428-exon-scaffold_389-1575043694:69470..70603Clytia hemisphaericaexon
TCONS_00063428-exon-scaffold_389-1510915933:74116..74330TCONS_00063428-exon-scaffold_389-1510915933:74116..74330Clytia hemisphaericaexon
TCONS_00063428-exon-scaffold_389-1510915933:73590..73756TCONS_00063428-exon-scaffold_389-1510915933:73590..73756Clytia hemisphaericaexon
TCONS_00063428-exon-scaffold_389-1510915933:71309..72911TCONS_00063428-exon-scaffold_389-1510915933:71309..72911Clytia hemisphaericaexon
TCONS_00063428-exon-scaffold_389-1510915933:69470..70603TCONS_00063428-exon-scaffold_389-1510915933:69470..70603Clytia hemisphaericaexon
TCONS_00063428-exon-scaffold_389-1491911889:74116..74330TCONS_00063428-exon-scaffold_389-1491911889:74116..74330Clytia hemisphaericaexon
TCONS_00063428-exon-scaffold_389-1491911889:73590..73756TCONS_00063428-exon-scaffold_389-1491911889:73590..73756Clytia hemisphaericaexon
TCONS_00063428-exon-scaffold_389-1491911889:71309..72911TCONS_00063428-exon-scaffold_389-1491911889:71309..72911Clytia hemisphaericaexon
TCONS_00063428-exon-scaffold_389-1491911889:69470..70603TCONS_00063428-exon-scaffold_389-1491911889:69470..70603Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063428-proteinTCONS_00063428-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_389supercontigscaffold_389:69470..74330 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.00459893 0.00490522 0.00384711 0.00192456 0.0741868 0.768595 0.0513451 1.39404 0.986273 1.0727 0.0664974 3.15119e-06 0.0282516 0.38314 1.14236 1.32241 0.292872 0.0177527 0.842401 0.0297075 0.00957125 0.172487 0.00921019 0.00598725 0.02488 0.0312976 0.00933617 0.0899964 0.00664967 0.00462856
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063428 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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