TCONS_00063455 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063455
Unique NameTCONS_00063455
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2159

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063455 ID=TCONS_00063455|Name=TCONS_00063455|organism=Clytia hemisphaerica|type=transcript|length=2159bp
GAAAACTCAGACACAACAAGGGATTTGAGAAGATTGTTATTAAGGATTGT
TGCGGAGTTCTTGGATCAAGGAAAGATGGTGCACGGATCGTGTCGTTGTC
GTGAACGATTGATGTGTGTGAATGCAGGTAGAGATGACgaagaatttttg
aaagaaaagcagCAAGAAGTTGAAGAATACAACAAACGAATTGGAGATTA
CGTCGACGGTTTCACAGTCCATGGTCTCACGAAAGTCTTTAAAGGGAAGA
AGAAAGAAAGTACAGTGTGGATGGTTTTCATCTTCGTCGGTTTGCTCCTG
GCTGGCGTTGTGATTGGTCGATTGGTAGCTAAATATTATCGATTCGAAAC
ATACACAGAAGTAAAATCAGTTGTGACGGCTAAAAATGTTATACCGAGTA
TTTCCGTCTGTGATTTTAGTGAGTTAAGAAAAGCGTATTTTTCGTATTGT
GGTACAACGCTTTTAAGTAAAGATGAAAATCGGACTAAAGAGTATTGCGA
TCATTCTAAATTGAATCTGGAAGCGCTGGATAATTCTACAATGGTTAATG
GCAAATGGAGAAATCGTCTGTTTGAGATTGAAGAATGTTACCCTTGGGAA
GGTGCTAAATGTAATTCACCCAAATATTTCAAATCCCACATGCTTGGTGC
GTGCTTCACTTGGAATTATGACGGTGAGTTTCACGATGCATACGGACATG
TGGATTTCCAATTCAAATACCTCCGGAACAGCAGTAAACATCGTCCGGAC
ATCATTATTATACCACATGATCCACGCATCAGTGAAATCGATTTGACCAA
AAAAATCACCATCGATATGAATAAACATTATGAAATCAAAATCGGCAAAA
CCTACATGATCCGAAAACCACACCCTTATTCGAAATGTACCGCTGAAGCA
ACCAATGCTGAATTAGACGTCTTCCCTGGGAACTACGATCGACGCACGTG
TCGTGAAACATACAAGCAGTTAAATTCCTTCAAAGAATGTGGcgatattt
ttgaatatttcaaaagctACTTGCCTAAATCATTCATCAAGAAATACGCA
CAGAATCGCACAATCGGGGAAATCGAAATGTGTATTTTGAAGACCATTAA
TGTTAAACCGCCTGAAGATTTGTGCCCATTCCCCTGCGAGGAGTTAAGTC
TCAATATCCATACAAACGTGTACGATGGAGACAAGCATAATAAAGATCTC
TACATCTTCGGTATCCAACTTGAGAATGTTGACACCTACACTGTAATGGA
AGAACAATCGTTGTATTCTGCCGAACAGATGAGTTCTGAAATTGGTGGTT
TCTTGGGATTGGTTATTGGCGCATCTTTGTTATCATTTGTTGAGCTGTTC
GCTTGCGGTGCATTGTACGTcttgaagaaaatcaaaagttgaaaCATGAT
TGGTTTATCGTAAAATGAGAACTCTATTTGTCTTGTGAATGGTGACAATT
TTATTGAATTGATATTGTGAAATGTCAAATAAACGAATctaaaaaaaacg
aaagatTCACTTCGTAATTGCTAGCTCTGGCAGGAACAGTGTAGATATTT
GAAACtctaaagattttatttttatatttttcccttgaaaaaggtaAGAC
CAAAATTCAAGAAGTTTACGTTTAAAAGACTCATCCCTTAGTTGCTTAGC
AACGAGTAAAGAAACACTTTTCTTCGACACCGTAACTGAGTTCTCTACCA
TCACTCTATGGTCAccttctttttgaaaaaattacagttgacattctcta
attcgataaaAATGAATTggaatttcatcgaataatggagaGTATCGAAT
AAGACCGTCAACTGTGATAAAACATTGGCCTTGACACCATTGCAAGGTTT
AAATAAGTATAGCAGAAGTGTTTTTTATCCATATTCCCTATGTGGAGTTT
TATGNCCCTTGACACCTTTGCAAGGTTTAAATAAGTATAGCAGAAGTGTT
TTTTATCCATATTCCCTATGTGAAGTTTTATGATTCACAAACAGTTTTGA
ACCCACTGATTTCAAAACCCTCTCTAATGTTTGCCTTTGGGAATTAACAC
GACGAGAAAAAGTATTGTAATGTATTAAAGTGAAAaattctgttttattt
accgTTTTACTAAGTAATATTTTACATTGTTTTGTCCTAAGTAAACAGat
cttttaata
Run BLAST on NCBI

protein sequence of TCONS_00063455-protein

>TCONS_00063455-protein ID=TCONS_00063455-protein|Name=TCONS_00063455-protein|organism=Clytia hemisphaerica|type=polypeptide|length=463bp
ENSDTTRDLRRLLLRIVAEFLDQGKMVHGSCRCRERLMCVNAGRDDEEFL
KEKQQEVEEYNKRIGDYVDGFTVHGLTKVFKGKKKESTVWMVFIFVGLLL
AGVVIGRLVAKYYRFETYTEVKSVVTAKNVIPSISVCDFSELRKAYFSYC
GTTLLSKDENRTKEYCDHSKLNLEALDNSTMVNGKWRNRLFEIEECYPWE
GAKCNSPKYFKSHMLGACFTWNYDGEFHDAYGHVDFQFKYLRNSSKHRPD
IIIIPHDPRISEIDLTKKITIDMNKHYEIKIGKTYMIRKPHPYSKCTAEA
TNAELDVFPGNYDRRTCRETYKQLNSFKECGDIFEYFKSYLPKSFIKKYA
QNRTIGEIEMCILKTINVKPPEDLCPFPCEELSLNIHTNVYDGDKHNKDL
YIFGIQLENVDTYTVMEEQSLYSAEQMSSEIGGFLGLVIGASLLSFVELF
ACGALYVLKKIKS
Run BLAST on NCBI

transcript from alignment at scaffold_39:292596..297292+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063455 ID=TCONS_00063455|Name=TCONS_00063455|organism=Clytia hemisphaerica|type=transcript|length=4697bp|location=Sequence derived from alignment at scaffold_39:292596..297292+ (Clytia hemisphaerica)
GAAAACTCAGACACAACAAGGGATTTGAGAAGATTGTTATTAAGGTATGG CTATAGAAGTCTCATGCTACAAATTGTATTAAATTTTGTTACTCGAGGAT AGCCAAGCAAGAATAAAATTGCTGGATCTGATATTGTAACCTAGGGAGCG GTAAACGACTTGCCGTAGGTGCAGGCAGAAGATGGAGAAAGTTGCCTTTT CTTTCCGTTGAATGATCTAAGTGTCCTTGATAGTATAAGATATTAGATAT TTGATTAAtattttatctgatattccgatggcggattggccaatttccca tcggtgAGGAATGATAGCCGGCCCTTTGATGTGCTgcatcctcagtcggg ttcaactacaAAACAACTATCTTCAAGCTTTCCAAAGCATAAAAATTGAA GTCTTAACTTTGTGCCGGTGTAACAGAAAATAAGTACTCTCCGGAAAAAA AGTACTCCCGGAGTACTTATTTCCCGGGAAATAAATACTCCCCAGTACTT TTCTATTAGGAAACCAGTACCCGCTCTGGGAAATTTGTACTCCCTGTAAA AGATATCTTAATCTAAAAAACTGTGCATACATTGAAGACCCGCTTTGCAA CCTTTGCAAGAAagttcccagctgacacacaacgttgtttcaatgtttat ctaatgttcataacgtccaattAACGTTacttgaacgttaaaacaacgtt gtgtgccagctgggttaaaTGAACTTTATGTACGAGAGGTAAATGCACTA TATTTTCATCACTCGACAAAATATTTCCCCAATTCTAAATGGTACACACT TAGAGTACTCTCTCACTCACCGAAAGCGATCGCTACAAGGATTGCAAGTT AAGGGGGGGGGGACAAAACTAACCAATTGattgattattttttcaaactt aatcTAATAAACTTATGGCTTGTTTCCTAGATAAAATAACTCATATTTCA TGGAAAGAATTTTCATTCCCCTCCACCCCCTTCCTTTCACACTGTTACAG CTAATCTGTCAGGTTGTGAATttagtttttcttataagcagaATCAAATT TTCGATTCATCTCTTTAAACCTAAAACTCTAAACTAACCTTCAAGATGCC TCCAACATTGTTTGTTCTTCTATTATAAAGTCGTAGTTAGTCAGTCGCAG TCATTGGGTCGTGTAATAAAGGACCCAGAAGAAGTTTCCTAAAATTGGAA TGtgagaattttgaatttcactAGTGCCTAGATGCAGGAGAATATTGCTT ATAAGAAATGATTGCTCAATTTAGACGGTCTCATATCAAGCCGACAAATT GTATCTGAATGGaatattaattttgaaatttatcttcAGAATCAGAGTTT GAATAACCTATTCAATGTGGCTTTAAAAGTATTTTGACTTTTCAATATTT AACGATAAACCTAGGCATCCAAGCAAAATAATCAGATAGGAATAAAACAC TAGCTATTTATTTGCAAATTGACAAATTTGCGGTTAGGCAACCGATAGGA ATTCTAACGCTAATTTGGTAATCGGGCATTTTGGCAAATACAATGgatga aataatattttaagtTCAGACTCAGAATAGGGTAAAATAGTGTCAAACCC ATTTCAAAAAGGTATGCTCAAAGCTGCTGATGCTGTACTCATAAACACTc gactaaaaaaacttttacagGCTTATAATTGCCATAATATTTGGAGAGGC AAATCCCCTTAAGAAGAGCTTCTTTATCCTACTCAAACTTCTTATGGGGA AGAAAgaggcaaaaaaagataaacggATTTAGCTGCTGAAACCCTTTAAC ATGTCCAATTGGattgactttatttttttcttatattcaGGATTGTTGCG GAGTTCTTGGATCAAGGAAAGATGGTGCACGGATCGTGTCGTTGTCGTGA ACGATTGATGTGTGTGAATGCAGGTAGAGGTGAGTGAAGGTTATTCTTTC GTGCAACTACATTGGTGGTCGTGCAGCATTCGCTTTTAGACTGTTTGGCA GCAGTAGACATTCATAGACAAAAAAGTTATAattaccaccctgaaaattg tccaagaTGGCCAAAGAGTTCGATCCTGTCAGATGCACATCTTGATATCA TCATAGCCTAAAAAAAGGAACTTCACAAGAAGCGTCCCCGTTCCTACTTT TGACTAAGTGACTCCCCCCCCCGGACTTTATAAACAAGTAGAGAGTCTGA TGAAGAGAAGTATTCCTTAAGAGAGGAATGCTGGACAGTCGTCCTGGATT TGATGTGCTTCGACCCTTGATTAATTAGAAACTGTACATTCTCTCTTTGA GGGTATCTATGATTTTCCTTTCCTACCTAGATTAGCTTTGAAATGTTGTG TTTTAACATGGCACAAATTATGTTGACTTCTTAGTGATTAGTGGAGGGGG TTTACCGGTATTTGTTTTTTCTACTAGTACTCCCGTATTGATGGAAGGTT TGCCGGTCATCGTCAGCCCTTCATTTCATtaaatgaaaaacttcaataGT TTATATACCAGCGatcaaagcaaggtttttcgttcgagacggaaaatgga ttttacataCAGCTGGGtagcacatattcttgaaaCCTTGGTAAATTCAG CCTCTTACTTCACTTAGACGTAAATCCATTAGAGATGATTGAGTATACAA AAATGTTGCTTTATTTTTCAGATGACgaagaatttttgaaagaaaagcag CAAGAAGTTGAAGAATACAACAAACGAATTGGAGATTACGTCGACGGTTT CACAGTCCATGGTCTCACGAAAGTCTTTAAAGGGAAGAAGAAAGAAAGTA CAGTGTGGATGGTTTTCATCTTCGTCGGTTTGCTCCTGGCTGGCGTTGTG ATTGGTCGATTGGTAGCTAAATATTATCGATTCGAAACATACACAGAAGT AAAATCAGTTGTGACGGCTAAAAATGTTATACCGAGTATTTCCGTCTGTG ATTTTAGTGAGTTAAGAAAAGCGTATTTTTCGTATTGTGGTACAACGCTT TTAAGTAAAGATGAAAATCGGACTAAAGAGTATTGCGATCATTCTAAATT GAATCTGGAAGCGCTGGATAATTCTACAATGGTTAATGGCAAATGGAGAA ATCGTCTGTTTGAGATTGAAGAATGTTACCCTTGGGAAGGTGCTAAATGT AATTCACCCAAATATTTCAAATCCCACATGCTTGGTGCGTGCTTCACTTG GAATTATGACGGTGAGTTTCACGATGCATACGGACATGTGGATTTCCAAT TCAAATACCTCCGGAACAGCAGTAAACATCGTCCGGACATCATTATTATA CCACATGATCCACGCATCAGTGAAATCGATTTGACCAAAAAAATCACCAT CGATATGAATAAACATTATGAAATCAAAATCGGCAAAACCTACATGATCC GAAAACCACACCCTTATTCGAAATGTACCGCTGAAGCAACCAATGCTGAA TTAGACGTCTTCCCTGGGAACTACGATCGACGCACGTGTCGTGAAACATA CAAGCAGTTAAATTCCTTCAAAGAATGTGGcgatatttttgaatatttca aaagctACTTGCCTAAATCATTCATCAAGAAATACGCACAGAATCGCACA ATCGGGGAAATCGAAATGTGTATTTTGAAGACCATTAATGTTAAACCGCC TGAAGATTTGTGCCCATTCCCCTGCGAGGAGTTAAGTCTCAATATCCATA CAAACGTGTACGATGGAGACAAGCATAATAAAGATCTCTACATCTTCGGT ATCCAACTTGAGAATGTTGACACCTACACTGTAATGGAAGAACAATCGTT GTATTCTGCCGAACAGATGAGTTCTGAAATTGGTGGTTTCTTGGGATTGG TTATTGGCGCATCTTTGTTATCATTTGTTGAGCTGTTCGCTTGCGGTGCA TTGTACGTcttgaagaaaatcaaaagttgaaaCATGATTGGTTTATCGTA AAATGAGAACTCTATTTGTCTTGTGAATGGTGACAATTTTATTGAATTGA TATTGTGAAATGTCAAATAAACGAATctaaaaaaaacgaaagatTCACTT CGTAATTGCTAGCTCTGGCAGGAACAGTGTAGATATTTGAAACtctaaag attttatttttatatttttcccttgaaaaaggtaAGACCAAAATTCAAGA AGTTTACGTTTAAAAGACTCATCCCTTAGTTGCTTAGCAACGAGTAAAGA AACACTTTTCTTCGACACCGTAACTGAGTTCTCTACCATCACTCTATGGT CAccttctttttgaaaaaattacagttgacattctctaattcgataaaAA TGAATTggaatttcatcgaataatggagaGTATCGAATAAGACCGTCAAC TGTGATAAAACATTGGCCTTGACACCATTGCAAGGTTTAAATAAGTATAG CAGAAGTGTTTTTTATCCATATTCCCTATGTGGAGTTTTATGNCCCTTGA CACCTTTGCAAGGTTTAAATAAGTATAGCAGAAGTGTTTTTTATCCATAT TCCCTATGTGAAGTTTTATGATTCACAAACAGTTTTGAACCCACTGATTT CAAAACCCTCTCTAATGTTTGCCTTTGGGAATTAACACGACGAGAAAAAG TATTGTAATGTATTAAAGTGAAAaattctgttttatttaccgTTTTACTA AGTAATATTTTACATTGTTTTGTCCTAAGTAAACAGatcttttaata

Coding sequence (CDS) from alignment at scaffold_39:292596..297292+

>TCONS_00063455 ID=TCONS_00063455|Name=TCONS_00063455|organism=Clytia hemisphaerica|type=CDS|length=4176bp|location=Sequence derived from alignment at scaffold_39:292596..297292+ (Clytia hemisphaerica)
GAAAACTCAGACACAACAAGGGATTTGAGAAGATTGTTATTAAGGATTGT
TGCGGAGTTCTTGGATCAAGGAAAGATGGTGCACGGATCGTGTCGTTGTC
GTGAACGATTGATGTGTGTGAATGCAGGTAGAGATGACgaagaatttttg
aaagaaaagcagCAAGAAGTTGAAGAATACAACAAACGAATTGGAGATTA
CGTCGACGGTTTCACAGTCCATGGTCTCACGAAAGTCTTTAAAGGGAAGA
AGAAAGAAAGTACAGTGTGGATGGTTTTCATCTTCGTCGGTTTGCTCCTG
GCTGGCGTTGTGATTGGTCGATTGGTAGCTAAATATTATCGATTCGAAAC
ATACACAGAAGTAAAATCAGTTGTGACGGCTAAAAATGTTATACCGAGTA
TTTCCGTCTGTGATTTTAGTGAGTTAAGAAAAGCGTATTTTTCGTATTGT
GGTACAACGCTTTTAAGTAAAGATGAAAATCGGACTAAAGAGTATTGCGA
TCATTCTAAATTGAATCTGGAAGCGCTGGATAATTCTACAATGGTTAATG
GCAAATGGAGAAATCGTCTGTTTGAGATTGAAGAATGTTACCCTTGGGAA
GGTGCTAAATGTAATTCACCCAAATATTTCAAATCCCACATGCTTGGTGC
GTGCTTCACTTGGAATTATGACGGTGAGTTTCACGATGCATACGGACATG
TGGATTTCCAATTCAAATACCTCCGGAACAGCAGTAAACATCGTCCGGAC
ATCATTATTATACCACATGATCCACGCATCAGTGAAATCGATTTGACCAA
AAAAATCACCATCGATATGAATAAACATTATGAAATCAAAATCGGCAAAA
CCTACATGATCCGAAAACCACACCCTTATTCGAAATGTACCGCTGAAGCA
ACCAATGCTGAATTAGACGTCTTCCCTGGGAACTACGATCGACGCACGTG
TCGTGAAACATACAAGCAGTTAAATTCCTTCAAAGAATGTGGcgatattt
ttgaatatttcaaaagctACTTGCCTAAATCATTCATCAAGAAATACGCA
CAGAATCGCACAATCGGGGAAATCGAAATGTGTATTTTGAAGACCATTAA
TGTTAAACCGCCTGAAGATTTGTGCCCATTCCCCTGCGAGGAGTTAAGTC
TCAATATCCATACAAACGTGTACGATGGAGACAAGCATAATAAAGATCTC
TACATCTTCGGTATCCAACTTGAGAATGTTGACACCTACACTGTAATGGA
AGAACAATCGTTGTATTCTGCCGAACAGATGAGTTCTGAAATTGGTGGTT
TCTTGGGATTGGTTATTGGCGCATCTTTGTTATCATTTGTTGAGCTGTTC
GCTTGCGGTGCATTGTACGTcttgaagaaaatcaaaagttgaGAAAACTC
AGACACAACAAGGGATTTGAGAAGATTGTTATTAAGGATTGTTGCGGAGT
TCTTGGATCAAGGAAAGATGGTGCACGGATCGTGTCGTTGTCGTGAACGA
TTGATGTGTGTGAATGCAGGTAGAGATGACgaagaatttttgaaagaaaa
gcagCAAGAAGTTGAAGAATACAACAAACGAATTGGAGATTACGTCGACG
GTTTCACAGTCCATGGTCTCACGAAAGTCTTTAAAGGGAAGAAGAAAGAA
AGTACAGTGTGGATGGTTTTCATCTTCGTCGGTTTGCTCCTGGCTGGCGT
TGTGATTGGTCGATTGGTAGCTAAATATTATCGATTCGAAACATACACAG
AAGTAAAATCAGTTGTGACGGCTAAAAATGTTATACCGAGTATTTCCGTC
TGTGATTTTAGTGAGTTAAGAAAAGCGTATTTTTCGTATTGTGGTACAAC
GCTTTTAAGTAAAGATGAAAATCGGACTAAAGAGTATTGCGATCATTCTA
AATTGAATCTGGAAGCGCTGGATAATTCTACAATGGTTAATGGCAAATGG
AGAAATCGTCTGTTTGAGATTGAAGAATGTTACCCTTGGGAAGGTGCTAA
ATGTAATTCACCCAAATATTTCAAATCCCACATGCTTGGTGCGTGCTTCA
CTTGGAATTATGACGGTGAGTTTCACGATGCATACGGACATGTGGATTTC
CAATTCAAATACCTCCGGAACAGCAGTAAACATCGTCCGGACATCATTAT
TATACCACATGATCCACGCATCAGTGAAATCGATTTGACCAAAAAAATCA
CCATCGATATGAATAAACATTATGAAATCAAAATCGGCAAAACCTACATG
ATCCGAAAACCACACCCTTATTCGAAATGTACCGCTGAAGCAACCAATGC
TGAATTAGACGTCTTCCCTGGGAACTACGATCGACGCACGTGTCGTGAAA
CATACAAGCAGTTAAATTCCTTCAAAGAATGTGGcgatatttttgaatat
ttcaaaagctACTTGCCTAAATCATTCATCAAGAAATACGCACAGAATCG
CACAATCGGGGAAATCGAAATGTGTATTTTGAAGACCATTAATGTTAAAC
CGCCTGAAGATTTGTGCCCATTCCCCTGCGAGGAGTTAAGTCTCAATATC
CATACAAACGTGTACGATGGAGACAAGCATAATAAAGATCTCTACATCTT
CGGTATCCAACTTGAGAATGTTGACACCTACACTGTAATGGAAGAACAAT
CGTTGTATTCTGCCGAACAGATGAGTTCTGAAATTGGTGGTTTCTTGGGA
TTGGTTATTGGCGCATCTTTGTTATCATTTGTTGAGCTGTTCGCTTGCGG
TGCATTGTACGTcttgaagaaaatcaaaagttgaGAAAACTCAGACACAA
CAAGGGATTTGAGAAGATTGTTATTAAGGATTGTTGCGGAGTTCTTGGAT
CAAGGAAAGATGGTGCACGGATCGTGTCGTTGTCGTGAACGATTGATGTG
TGTGAATGCAGGTAGAGATGACgaagaatttttgaaagaaaagcagCAAG
AAGTTGAAGAATACAACAAACGAATTGGAGATTACGTCGACGGTTTCACA
GTCCATGGTCTCACGAAAGTCTTTAAAGGGAAGAAGAAAGAAAGTACAGT
GTGGATGGTTTTCATCTTCGTCGGTTTGCTCCTGGCTGGCGTTGTGATTG
GTCGATTGGTAGCTAAATATTATCGATTCGAAACATACACAGAAGTAAAA
TCAGTTGTGACGGCTAAAAATGTTATACCGAGTATTTCCGTCTGTGATTT
TAGTGAGTTAAGAAAAGCGTATTTTTCGTATTGTGGTACAACGCTTTTAA
GTAAAGATGAAAATCGGACTAAAGAGTATTGCGATCATTCTAAATTGAAT
CTGGAAGCGCTGGATAATTCTACAATGGTTAATGGCAAATGGAGAAATCG
TCTGTTTGAGATTGAAGAATGTTACCCTTGGGAAGGTGCTAAATGTAATT
CACCCAAATATTTCAAATCCCACATGCTTGGTGCGTGCTTCACTTGGAAT
TATGACGGTGAGTTTCACGATGCATACGGACATGTGGATTTCCAATTCAA
ATACCTCCGGAACAGCAGTAAACATCGTCCGGACATCATTATTATACCAC
ATGATCCACGCATCAGTGAAATCGATTTGACCAAAAAAATCACCATCGAT
ATGAATAAACATTATGAAATCAAAATCGGCAAAACCTACATGATCCGAAA
ACCACACCCTTATTCGAAATGTACCGCTGAAGCAACCAATGCTGAATTAG
ACGTCTTCCCTGGGAACTACGATCGACGCACGTGTCGTGAAACATACAAG
CAGTTAAATTCCTTCAAAGAATGTGGcgatatttttgaatatttcaaaag
ctACTTGCCTAAATCATTCATCAAGAAATACGCACAGAATCGCACAATCG
GGGAAATCGAAATGTGTATTTTGAAGACCATTAATGTTAAACCGCCTGAA
GATTTGTGCCCATTCCCCTGCGAGGAGTTAAGTCTCAATATCCATACAAA
CGTGTACGATGGAGACAAGCATAATAAAGATCTCTACATCTTCGGTATCC
AACTTGAGAATGTTGACACCTACACTGTAATGGAAGAACAATCGTTGTAT
TCTGCCGAACAGATGAGTTCTGAAATTGGTGGTTTCTTGGGATTGGTTAT
TGGCGCATCTTTGTTATCATTTGTTGAGCTGTTCGCTTGCGGTGCATTGT
ACGTcttgaagaaaatcaaaagttga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039770XLOC_039770Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063455-proteinTCONS_00063455-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063455-exon-scaffold_39-1491911889:292596..292639TCONS_00063455-exon-scaffold_39-1491911889:292596..292639Clytia hemisphaericaexon
TCONS_00063455-exon-scaffold_39-1510915933:292596..292639TCONS_00063455-exon-scaffold_39-1510915933:292596..292639Clytia hemisphaericaexon
TCONS_00063455-exon-scaffold_39-1575043694:292596..292639TCONS_00063455-exon-scaffold_39-1575043694:292596..292639Clytia hemisphaericaexon
TCONS_00063455-exon-scaffold_39-1491911889:294436..294524TCONS_00063455-exon-scaffold_39-1491911889:294436..294524Clytia hemisphaericaexon
TCONS_00063455-exon-scaffold_39-1510915933:294436..294524TCONS_00063455-exon-scaffold_39-1510915933:294436..294524Clytia hemisphaericaexon
TCONS_00063455-exon-scaffold_39-1575043694:294436..294524TCONS_00063455-exon-scaffold_39-1575043694:294436..294524Clytia hemisphaericaexon
TCONS_00063455-exon-scaffold_39-1491911889:295267..297292TCONS_00063455-exon-scaffold_39-1491911889:295267..297292Clytia hemisphaericaexon
TCONS_00063455-exon-scaffold_39-1510915933:295267..297292TCONS_00063455-exon-scaffold_39-1510915933:295267..297292Clytia hemisphaericaexon
TCONS_00063455-exon-scaffold_39-1575043694:295267..297292TCONS_00063455-exon-scaffold_39-1575043694:295267..297292Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_39supercontigscaffold_39:292596..297292 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.141934 0.0617996 0 0 0 4.85656e-08 0 5.83965 3.76541 5.35441 5.95759 7.38601 5.04789 13.2102 10.1614 0 1.59775 0 5.02834e-08 1.81735 1.63372 0.415143 0.824473 1.3094e-06 0 0.224525 0.0532486 0.0807744 0.0205741
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001873ENaC
Vocabulary: Biological Process
TermDefinition
GO:0006814sodium ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005272sodium channel activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006814 sodium ion transport
cellular_component GO:0016020 membrane
molecular_function GO:0005272 sodium channel activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063455 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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