TCONS_00063482 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063482
Unique NameTCONS_00063482
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length255

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063482 ID=TCONS_00063482|Name=TCONS_00063482|organism=Clytia hemisphaerica|type=transcript|length=255bp
CTTCGTTTTTTTGCCCACTCGATGTAGTTCGCTCTAAGTTTACCTCGCGA
CCAAGTTGGGTTCGTAGAACGTTCATTTTTCGTTTTACACAATCCACGTT
CGTAGAATAATGGTCAGCAATCTTTTGCCACGCTAGAGACTTCATATCTC
GCTTCGAGTATGCGTCATGATGTACATCCCACAAACAGGgattttcctca
aaaaatgAGATCAACTCTGAAGTTTCTTCCTCACTCCAGTATTTCTTATC
GTCCG
Run BLAST on NCBI

transcript from alignment at scaffold_39:61865..62119

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063482 ID=TCONS_00063482|Name=TCONS_00063482|organism=Clytia hemisphaerica|type=transcript|length=255bp|location=Sequence derived from alignment at scaffold_39:61865..62119 (Clytia hemisphaerica)
CGGACGATAAGAAATACTGGAGTGAGGAAGAAACTTCAGAGTTGATCTca
ttttttgaggaaaatcCCTGTTTGTGGGATGTACATCATGACGCATACTC
GAAGCGAGATATGAAGTCTCTAGCGTGGCAAAAGATTGCTGACCATTATT
CTACGAACGTGGATTGTGTAAAACGAAAAATGAACGTTCTACGAACCCAA
CTTGGTCGCGAGGTAAACTTAGAGCGAACTACATCGAGTGGGCAAAAAAA
CGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039789XLOC_039789Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063482-exon-scaffold_39-1491911889:61865..62119TCONS_00063482-exon-scaffold_39-1491911889:61865..62119Clytia hemisphaericaexon
TCONS_00063482-exon-scaffold_39-1510915933:61865..62119TCONS_00063482-exon-scaffold_39-1510915933:61865..62119Clytia hemisphaericaexon
TCONS_00063482-exon-scaffold_39-1575043694:61865..62119TCONS_00063482-exon-scaffold_39-1575043694:61865..62119Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_39supercontigscaffold_39:61865..62119 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.41767	0.691226	2.40774	0.785198	8.60313	2.2661	1.82264	0.853166	1.79196	0.739879	1.43629	1.41624	0	0.979156	0	1.72778	1.06424	0.545405	0	0.788491	0	1.00286	0	0.738895	20.5482	17.6596	0.971953	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063482 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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