TCONS_00063530 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063530
Unique NameTCONS_00063530
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2107

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063530 ID=TCONS_00063530|Name=TCONS_00063530|organism=Clytia hemisphaerica|type=transcript|length=2107bp
tcaCTTGATTTCAGGACATGTTGATTCCATATTTCTGTATCACAACTGAC
ATTTCAAGTTCTAAAATGAAAATCCATCAAACAGGATGTCTTTGGAGATA
TGTCCGGGCAAGCATGTCATTATCAGGTTATCTACCACCCATTTGCGATC
CAGAAGATGGCCATTTATTGCTAGATGGTGGATATGTCAACAATTTACCA
GCTGACATCATGTTATCGATGGGAGCGAAAACCATAATTGCGGTTGATGT
TGGGTCACGTGATGAAACTGATCTGACCAATTACGGAGATTCTTTAAGTG
GCTTCTGGATGCTGTGGAAGAAATTCAACCCATTTGCTTCACACGTTCGA
ATTCCAGACATGGCAGGGATTCAGAGTCGTTTAGCGTACGTTTCATGCGT
ACGTCAACTGGAAGAAGTCAAACATGCCGATTATGTCACCTACATTCGAC
CGCCTATCGACAGGTTCAAAACGCTTCAATTTGGAAGTTTTGACGAAATT
CTCGAAGTGGGATACACACATGGCCAAACAGTGTTCAACACCTATTTTAC
CGAAAGACTTTTTCCATCAACCAATAATGAAGAATCTCTCTCAAagcaaa
aacaacaaattaccATTGATCGTAAAACAGCGCCATCGTTTACCGACCTG
ACGCAACTAGTGGCTGTTGTAAAGACACCCAACGTGCCGCAATCGGTGTT
GGAAAAGCGCGCGCAATTATTCGAGTACAGATCGGCAGACGAGGAGAGCG
ATCACAACGATGACCAGGTAGATTACTACGCACGACAACGAGGTGGTTCG
CTCACCGAACAGGACATGGGTCGGGAGAATGAAAGTCAAGATGAAGGTGG
TTATGAGTCAGAAGATACCACCAAGGTGCGGCATTCATACCATCGACAAT
TCAGTGCCACGTAAACTCCATGTATAACCGATAGCTTTTGAATTCTTGAA
AGAGAAGTCGTGcacgaaaaaaaaagaaaactttactAACGTGGTAACGG
CAACCTGGAGAAGGTATACGTGTTCATTGTTTGATCATAAACGTTTTTGA
AAGCAGGATGCCTTCATTTTGATTATGAATTGCACATTTATTACTTCATC
TTACATGGAAACAGATCTCTTGATGATGACGAGCTCAACATAAGTTAGAT
TTTGATGGTGAGTCTATAGCTTTATAATGAATCTTGTACGAAAACAATTT
TATANTTTGATGGTGCAGTATATAGCTTTATAATGAATCTTGTACGAAAA
CAGTTTTATagcgaaaattcaaaattatcaatttaatttaatttaatttc
aaaatttcccatTAGGAGGATAACATTTTTTGTGTGCACGCACAATAATA
AGCaaatattcaagtattttcGATATCCGATTATTTCAGGTTGAATATGT
TTTATCGTTCCCTCTTTAGCAAAATATGCATGTTCCTCCTttccactttc
aaaaaacttcgatGTCATATTCGAACGTTTCACTTTCTCAACTAAACATG
TcgatttcatttcattgttttctctTTAATTACCAGAACATTCGAATTCA
TTTCTCTTTGATATTTTATCCTTTTTCGTTAATTTAAAAAGAGAAAACTT
CGATCATTTATTTggcttttgtttttttattgagaagaaaacTTCTTTTG
TATTCACAAAAGGGATATTCACTGTCGGTTATCTAAAAAAATATCCGACA
GTGTCTTTTGCTAAGAGGTTGACGATAATTTAATTCATGCATCGGTTCGA
AGATAAACAAAGAGTAGACATAAACAAGTTGTATTGACTTGAGAAAATAT
CACAATGTTTAGAGTTATCTAACCGCTGGCCTTTCAACGACTTGGTgtta
tttcaattttacaaTCAGGGTGGTTTCACACTGTTGCTTGAAACTTTTGG
TAACAAAGTAGTGCACGATCctatcttttgttttctattatATAAAATTG
GCACGATcgcttgaaaatttcaagcaaaCTTCAAGCAAAAACGATTAAGC
TAATGAGTAATTCATTTCGCTTTGTAAACTCAAGTTTATTTGCGAGAACC
AACATTTATAAGGATAGGTTTGTTTCTTATGCGtgattatataaaaaaaa
ctgttaa
Run BLAST on NCBI

protein sequence of TCONS_00063530-protein

>TCONS_00063530-protein ID=TCONS_00063530-protein|Name=TCONS_00063530-protein|organism=Clytia hemisphaerica|type=polypeptide|length=298bp
MLIPYFCITTDISSSKMKIHQTGCLWRYVRASMSLSGYLPPICDPEDGHL
LLDGGYVNNLPADIMLSMGAKTIIAVDVGSRDETDLTNYGDSLSGFWMLW
KKFNPFASHVRIPDMAGIQSRLAYVSCVRQLEEVKHADYVTYIRPPIDRF
KTLQFGSFDEILEVGYTHGQTVFNTYFTERLFPSTNNEESLSKQKQQITI
DRKTAPSFTDLTQLVAVVKTPNVPQSVLEKRAQLFEYRSADEESDHNDDQ
VDYYARQRGGSLTEQDMGRENESQDEGGYESEDTTKVRHSYHRQFSAT
Run BLAST on NCBI

transcript from alignment at scaffold_392:63481..75848-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063530 ID=TCONS_00063530|Name=TCONS_00063530|organism=Clytia hemisphaerica|type=transcript|length=12368bp|location=Sequence derived from alignment at scaffold_392:63481..75848- (Clytia hemisphaerica)
TCACTTGATTTCAGGACATGTTGATTCCATATTTCTGTATCACAACTGAC
ATTTCAAGTTCTAAAATGAAAATCCATCAAACAGGTATTCTTGACCTCCT
GTGAAGTTTTTTTTCATAAATTGTTCGTTTTTGGATAAACTGTAAAATAT
CATTTTAACATTGGTATAGCATACTTAACCTTTATAGCTTTTTGGACCTA
CCCCGGTGGGGTGGAGGTCCTATAAATTAACCCGTGTTCGTTAGTTAGTT
AGTTCGTTCGTTCGTTCGTTAGTTACCAACTTTTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTACTTCTG
AATGGAATAATTTGCCTGTTAATATTAAGTCTCTCCATCTTTACTTTTAC
GCGTACCCGTGTCCCATTTTGCCTGAGTATATATTTCTATTTTTCATAAG
TCTTATTTTTTTCCCTAATTGACTTATGTGGTTATTTTTTACTGTAATCG
CCAGATAGGTCTAATCAGCATTCCAGCTTTTGTTGAATGGTCAAGTTTTA
GCTAGTTTTTCTTTACAGGATGTCTTTGGAGATATGTCCGGGCAAGCATG
TCATTATCAGGTTATCTACCACCCATTTGCGATCCAGAAGATGGCCATTT
ATTGCTAGATGGTGGATATGTCAACAATTTACCAGGTCATTATTTTAACT
TTAAGTGACACCATTTTACAGTTGATAATGTGAAAAGCGATTCTCGTACA
TAGGGTCTATTTTCTCGTAATGGGAATGGGAATGTGCTTTTTAGACTGTT
TATATATATTTTTTGCCACTTAGTTTTTGCGCAAAATGAATAACTCTTGG
CTCAAACATGGCTCGATGGAGTAATCATAGACGACTTTTTTAAGTTAAAC
TTTTATTTCAGCTGACATCATGTTATCGATGGGAGCGAAAACCATAATTG
CGGTTGATGTTGGGTCACGTGATGAAACTGATCTGACCAATTACGGAGAT
TCTTTAAGTGGCTTCTGGATGCTGTGGAAGAAATTCAACCCATTTGCTTC
ACACGTTCGAGTAAGTTAAATTTATCTTTGACTGAGGTTTTTATGTTGGA
TCGTTTTACCAAATATTACCCCCAACACACCTCCTTTACACCTGGCCCGG
TCAGATCAGCCCCGGTGAGTAGCCCAGTGAAGGAAATACCCAAAAACAGG
CCAAATTTTGGCAACCCCGGTCAAAAAATAACTAAAAATTTAAACCCGCT
CAAAAAAGGAAATGCTTATTGCCCTGCCCCGAAAAGTTGAAAATTTGAAC
CAAGATGTTTATTGGAGTTATTTTTTTATCAACCTATTTCAAGGCTTCCA
GTGACTCCACATTCTAAATTCAATGTCAATCTGATTAGAAGTTCAAGATT
TATGGCTTGTTTTCTGTTTTATTAGTTCATGGGAAATTAAGACAGTTTTG
CCGGTTGCAAATGCCCATAATTATATGAAAATGTTGAAATCAACAAACTG
AAAATGTATTTTTCCAAGAAATAATATGAAAAACAAAAGTAAATATCTTT
ACTAGCGCCTCTTAATGGCGATTTAGGCTATTTAAGCTGTATCATTATAT
CAACAGTTTTCAGTGATATTGCATGAAACCGAATCAATCAAAAGATTAGT
ACATTGAATCTGCAAAAAATATTCTTATTGATGTAATCTTAAATTTTTTC
CTAAGGGTGGATTAGAAGATCTTAAAATTCCAACACAAATCCCCAATCAT
TTGTCAGTTTCATTTCTTTTTCACTTTATTAGTTTTCTTCTTATTTCTTT
AGAAGCATCTTTTAAACTTTCCTATACACTTTGAACATTAAATAAAAAGG
AGTCTGCTAAATTGCGTGGGATGCGTGGGTGCGTGGGTCAATATTTTTGC
GTGGGTCATTGTTTTGCCTGGGTGCGTGGGTCAAAATTTTTTTTACGTGG
CTCAAAAATTTTGCGTGGGTCAAATGTTTTGCGTGGGTCATATTTTTGGT
GTGGGTCATTATTTTTTGCGTGGGTCATTATTTTTTGCGTGGGTCATTAT
TTTTTGCGTGGGTCAAAGTTTTTGCGTGGGTCACTATTTTTTGGTGATTT
TTTAGCAAACTTGAATTTTTTTACCAAATTAAAACTTTCGAGTTAGCTAA
CTCGTTTTTTTTTGTCAAATTAAAATTTTCAAGTTATCTTATACAAAAAT
GTGTTGTGTATCTACGAAAACTAAACAAAAGCACACTGTTTTTATGTAAC
GCGTTGTGGTTTATTTTGCATATCTGCACTTATTTACTATAATGGTATAA
TATTATACAGAATCAACACACACCACATACTTCAGGCAGCTTCAGGATCA
CACTTTTGAATTTTAGCATGCTATATTTCAGGATTCCAGTGTCATGGAAA
TAAACCCTATAACTTTAAGCAAAAAAAATGAGATATGACTGTTCATTGCT
TCTTTCCTTTCTATTGAATTTTTTCCTCCCTTTTTCTCTTGCTTTGAAAA
AAGGTACAGCGTCTTTATTTCGTCCAATTTTTTAAATTGGCCTTCTTTAT
GTACTTAAATCAAAGAAATCACAGGTGGGGTGGACGAAATAATTGACAAC
GATTAAATTGTTTAGTAATCGGTCGCCTAATGAATATAACTTTTGTGGAA
AAATTTTCAGATTTTGTCGCCATTTGAACACTCAAAGGAAACCCAAAAGA
TTAAAGCGCGCTATAAGAAGCTATAAAAGCTGACATGTTCAGTCAGTGGA
ATTAAAAAATATAAAGCCGCTTGATTGTGTACATTTTTTTGGCCATTCTT
AGGTATATACAAAACTTATTAATTTTGGACGAAATCTCCCAAAAGGGAAA
ATTCCACTTATAAAAAGACACTCCCCGCCCTGTTGGAAACAGTCTTTCCA
ACCTCGTTTATTGGAACAAATTCACCATATTCAGAAAGTACGGAACTGTA
CAGCTATGTAAAATAAACAAAATAAACCAAAACGTGTTATGTAAAATACA
TTCAACATTTTGGATGTGACCAGTTCGAATTTCAAGGTAAGGCATTTTTT
CGAATTACAGAGAGAATTTTGATCACGCAAAAGTTTTGACCCACGCAAAA
AAATAATGACCCACGCAAAAAATTAGACCCACGCAAAAAATATGACCCAC
GCAAAAAAATTGACCCACGCAAAAAATTTGACCCACGCACCCACGCAAAA
AAATGACCCATGCAAAAATATTGACCCACGCACCCACGCAACCACGCAAC
CCACGCAATTTAGCAGACTCAATAAAAAGAAAGCTAATAAAGTGAAAAAG
AAATAGAAGTGACAAATAATTATGAATTTGTGTCAAAAAAACTTTGAATT
TTCTTTTTAACCTAAAGTGCTTTCCATCATAACCCTAGGAACAAATTCAA
GATTTACTTCAATAGAAATATTTTTACAGATTCAACGCAGTTATTCTTTT
TGATTTTGGGTTACATGCAATTTAACTGAAAACTGATGAAAAATTGAATC
ATACCAGGCATACAGCTTGACCACCAAATCACCAAAAAGCGCTAGGAAAG
GTATTTTCTTTTGTTTTTTTCCGTGCTAAAAGGGGTATGTTTTTCCTCTA
TCATTTTCTCGGAAAAAGCATAATTATTTTGTTAATTTCCACTTTTTATT
TCATTTGATATACTGATGGCGAAATTAAAAGTATACACGAGATTTAAAGA
CGCCGTCGGGCACTTTTCTAAGTTTCAGGGGCCGCGGCATTTTTCAAAGC
AACAAAACTTACTAATCATCAAGCCAAATTCGGCTTAATAACCTTGAAAC
AGACCTGTTTTAGGCGATCTAGAAGGGCTAAAATTAAAAAGTTTTTGCCC
GTTGTCACCAACCATAGTGGCGCCTCCGCAAATTTTTTTTCCGTAGACAG
GCGGAAATATCTTTAATGGTCGGAAATATCATAGCGTAATGGTCGGAAAT
ATCATTTGATGGTCGGAAATATCTTTTGATGGTCGGAAATATCCAAAACT
CTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGGCGCCTCCT
TAGTCAGTACATCATGACCCTATCACTTTCAAAGTGAACGCGTCCTGTGT
TGGGAATCAAATTTAAAGTATAAATTGGTTCAGTACAAAGATTTTATTAT
GGGAAGAATTTTTTTGCGTATTCACAATCTTATGAGGCTAAACAATACCA
TAAAAAACAACATTTTATAACAGTTTTGATCCCAGAATGACTGAATCTTA
AGCCAAATTGAGGTTTAGTAGTAAAAGCAGGGGGTATAAACCTGAAATGC
CTCAACATCACCATCAGCCTCTAGAACAGCTTTTGAACTATTTGAGGCTT
GAAGTGCCATAAAAACAGCCGAGCGTCAACAAAAATTTACTGAATCTCAT
AACAAAATAGTGTACCCCGGTGAAAATTTTCCTCCAGGTAAAATATTTTC
TCGGGGTAAAATATTTTCACTTTTTATTTTGCCATGTTTTCCAAAGTTTA
ATTATCGCGTATTTCATTATTAAGATTCCAGACATGGCAGGGATTCAGAG
TCGTTTAGCGTACGTTTCATGCGTACGTCAACTGGAAGAAGTCAAACATG
CCGATTATGTCACCTACATTCGACCGCCTATCGACAGGTTGCTTGCATTT
CTTTCACTATTGAAATGAGAATCCATGATATTCTACAGCTTCACGATTTA
AATTTTCAAAATCGGTTTTAACTAATTTTGAAATCGAAATCAGTAAATAT
AAGATATAGCACATTCTAAGGATTGACCTTCTTTTAGAAAAGACTTAAAA
TACTACCTCCCAACTCTGGTTTAGTGTCTGTATGATGGCCACCAATGGAG
CATTTGTTGCAAAATCCTTTTGATTCTCTTTCAGGTTCAAAACGCTTCAA
TTTGGAAGTTTTGACGAAATTCTCGTAAGTTTTATTCACCTTTTGATTCC
GTGTAACAAATTCCAAAAAAGGAAAAAATTAAAAATCGGTTTAGACCTAG
CGCTCCGGTATGGTATTTTTTACGGATAGGAAGTGTTCATACAGATTTTA
AATACTGATGTTTCGGAGCAACGAAACGGAGCAGTTCCGTTACAATGAAA
ATAGTGGACCGAAACCGTTTCGGTCTGTTTTGCTTTGTAACGGCTTCTAT
ACGGACGTTCCGATTTTTACGTTTACACAATGTTTCGGAACCGTTTCGTT
TCGGAGCGATACAAAACCTTAAGTCTGAACATGGTCTTTGTCGAAATATG
TTGATCCTTTGAAACGTTGTTCGCTGCTTCGCTTTTCTTTTAACAGGAAG
TGGGATACACACATGGCCAAACAGTGTTCAACACCTATTTTACCGAAAGA
CTTTTTCCATCAACCAATAATGAAGAATCTCTCTCAAAGCAAAAACAACA
AATTACCATTGTACGTGTGTTACTTTCTCCTAAATCTATTAGCAAGCGTA
AAACCTTAGGTTCCTAAAGCAAAGTGAATTCATCATATAAAATTCTGTTG
CACATAGCAATTGATAACAGGAAAATTTTGAAGGTAATAAATTTTAATAG
ATTTTAAGAGAAACGATATTTCTTCATTCATTGGTGATTGCCGTGAAAGA
CAGTATGAAAGTATGTGTTTGAATATGAAAACGGAATACAAGCAGAAACT
TTTGCTATTTTCGCGAATTTTGGCCCTTTTCGCGAAAGTAAATGCCTTTA
AAAATTCTTGGAAGTGTCATTCACGAAAGTTTATGCTCGCGAAAAATTCT
TGACATAGAAAATCTGTAAAATTTAAAACTTTGAATAAAATGTAACATTT
GTTTCACTTTTTAGCCTGTTAAAAGATTAATAAGTCAAAAGACAATCGAA
GAAGTATTTATCCCTCTAATCGCACGATGAACTATTTTTTTCCTATTTGG
CGCTCCTTCAAAGAGAGCAATTAATCGTTAATTGCATCCTTTAGAGAGCA
ATTAATTGTTAATCACTTCAATGCGGCGCTAGTCTAGCAAGCTAGACGAC
TAATTTATACATAGTAGAAATAAAGCAAAAAGTAATGAATGGAATAATTT
TAGTCGTCTAGAAACCTTTGTGCACTTACTCCAAACAAAAGAAAAGTGTC
AATATTGCAATTATAATTTTTTCCTGTTCAAAATANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGTATCTATAAGGCTG
GAACACCGGATTCTTCCAGTCGTTTATACAAACTAAATCCCGTATTATTA
TTATTAGTATTGATATTATTAGTATTACACGCACTATAAACGACTCCAGT
CTAATGCGGCGCCAATTTTACAATATTGATTTTAATGTTTTTTTTATAGT
TTTTTTTCATCGAACGTTTTAATTGCATTCGAAATTAGTTTTGTGAAAAA
GAAAAACATTTAAAGAGAAGAGAAAAATATAAAACTTTCAGTGTAATTTA
CTTTCCTGACGGGAAAAAGTAGTGAAACAAATTGTGCGATTAGCTCGTAA
TCACATAATAACTCGTACAATTCGAAAATTGCACTCGTGATTTTTTTGTT
TCTAATTTTCCTCGTCCTTTCCGACCGAAAATTATTAACAAAAAATCACT
CGTGCAATTATTCTCGAATTGCACTCGTTATCATGTGATTACATATATAC
TAAGCCATTTTTTCATGTGAAAATTTTAATTTCTACGTCTTGATTCGCGA
AAGTTTATGCTCGCGAAAGTTTATGCTCGCGAAAAAGCTTTTTCCGTCAA
ATTCGCGAAATTAAATGTCGTAAATTTTGTGATTTTTCGACCTCGTGAAA
GTTTCTGCCCACGAAAGTTTGTACACCTAAAGTAGTTCTCTTGTTAAAAA
AGGTAAAAGTGCGTTATGAATGCATTGGAGGGTACATTCCATACCGAGTA
TACATTGCGTTTATCTCCTTCCTTTATCTGCCTATGGTTCTCCTTGAAGG
ATTTTCTGTAGAGAAGTGTTTTTGTGGCTGCTATTCGGTTGAAGGAGTGT
ATATTTTGCACGCATATTCTGGTGTCAAACAAATGGAATTATAAACCCTT
AAATATTTATGTTGTTTAAATACTAGGATCGTAAAACAGCGCCATCGTTT
ACCGACCTGACGCAACTAGTGGCTGTTGTAAAGACACCCAACGTGCCGCA
ATCGGTGTTGGAAAAGCGCGCGCAATTATTCGAGTACAGATCGGCAGACG
AGGAGAGCGATCACAACGATGACCAGGTAGATTACTACGCACGACAACGA
GGTGGTTCGCTCACCGAACAGGACATGGGTCGGGAGAATGAAAGTCAAGA
TGAAGGTGGTTATGAGGTAAGGATGGTGGGGTAATTTTCTCCATAGGATT
ATGTGATTTTTGAAGAATGATTATGATTTTGTTACCTACTTTCAACTTGT
CGGCTCTTTTCACGCCTGACCTTATTAGTGCTGTTTTCGGGCCAATGGTG
GATTAAGAGCCAGTGAAAGAAGGACCTAGTTTTTGTCGGCGTAAAAGGAT
ATTGTGTGCTTTAGCGCCGATAATCTAGAACTTTAACAGGATAAGGACGC
AAATGAGAAAGGGGCTGACAAAAAGGTCAATAATCAATGTACTTAGGCAT
CTCGACTAAAAATTGGTAATTTGAAAAGTGTCCTTCTTCCACTAGTTTGT
TTATTCCCTCTTTTACAGTCAGAAGATACCACCAAGGTGCGGCATTCATA
CCATCGACAATTCAGTGCCACGTAAACTCCATGTATAACCGATAGCTTTT
GAATTCTTGAAAGAGAAGTCGTGCACGAAAAAAAAAGAAAACTTTACTAA
CGTGGTAACGGCAACCTGGAGAAGGTATACGTGTTCATTGTTTGATCATA
AACGTTTTTGAAAGCAGGATGCCTTCATTTTGATTATGAATTGCACATTT
ATTACTTCATCTTACATGGAAACAGATCTCTTGATGATGACGAGCTCAAC
ATAAGTTAGATTTTGATGGTGAGTCTATAGCTTTATAATGAATCTTGTAC
GAAAACAATTTTATANTTTGATGGTGCAGTATATAGCTTTATAATGAATC
TTGTACGAAAACAGTTTTATAGCGAAAATTCAAAATTATCAATTTAATTT
AATTTAATTTCAAAATTTCCCATTAGGAGGATAACATTTTTTGTGTGCAC
GCACAATAATAAGCAAATATTCAAGTATTTTCGATATCCGATTATTTCAG
GTTGAATATGTTTTATCGTTCCCTCTTTAGCAAAATATGCATGTTCCTCC
TTTCCACTTTCAAAAAACTTCGATGTCATATTCGAACGTTTCACTTTCTC
AACTAAACATGTCGATTTCATTTCATTGTTTTCTCTTTAATTACCAGAAC
ATTCGAATTCATTTCTCTTTGATATTTTATCCTTTTTCGTTAATTTAAAA
AGAGAAAACTTCGATCATTTATTTGGCTTTTGTTTTTTTATTGAGAAGAA
AACTTCTTTTGTATTCACAAAAGGGATATTCACTGTCGGTTATCTAAAAA
AATATCCGACAGTGTCTTTTGCTAAGAGGTTGACGATAATTTAATTCATG
CATCGGTTCGAAGATAAACAAAGAGTAGACATAAACAAGTTGTATTGACT
TGAGAAAATATCACAATGTTTAGAGTTATCTAACCGCTGGCCTTTCAACG
ACTTGGTGTTATTTCAATTTTACAATCAGGGTGGTTTCACACTGTTGCTT
GAAACTTTTGGTAACAAAGTAGTGCACGATCCTATCTTTTGTTTTCTATT
ATATAAAATTGGCACGATCGCTTGAAAATTTCAAGCAAACTTCAAGCAAA
AACGATTAAGCTAATGAGTAATTCATTTCGCTTTGTAAACTCAAGTTTAT
TTGCGAGAACCAACATTTATAAGGATAGGTTTGTTTCTTATGCGTGATTA
TATAAAAAAAACTGTTAA

Coding sequence (CDS) from alignment at scaffold_392:63481..75848-

>TCONS_00063530 ID=TCONS_00063530|Name=TCONS_00063530|organism=Clytia hemisphaerica|type=CDS|length=7176bp|location=Sequence derived from alignment at scaffold_392:63481..75848- (Clytia hemisphaerica)
TCAGAAGATACCACCAAGGTGCGGCATTCATACCATCGACAATTCAGTGC
CACGTAAGATCGTAAAACAGCGCCATCGTTTACCGACCTGACGCAACTAG
TGGCTGTTGTAAAGACACCCAACGTGCCGCAATCGGTGTTGGAAAAGCGC
GCGCAATTATTCGAGTACAGATCGGCAGACGAGGAGAGCGATCACAACGA
TGACCAGGTAGATTACTACGCACGACAACGAGGTGGTTCGCTCACCGAAC
AGGACATGGGTCGGGAGAATGAAAGTCAAGATGAAGGTGGTTATGAGGAA
GTGGGATACACACATGGCCAAACAGTGTTCAACACCTATTTTACCGAAAG
ACTTTTTCCATCAACCAATAATGAAGAATCTCTCTCAAAGCAAAAACAAC
AAATTACCATTGTTCAAAACGCTTCAATTTGGAAGTTTTGACGAAATTCT
CATTCCAGACATGGCAGGGATTCAGAGTCGTTTAGCGTACGTTTCATGCG
TACGTCAACTGGAAGAAGTCAAACATGCCGATTATGTCACCTACATTCGA
CCGCCTATCGACAGCTGACATCATGTTATCGATGGGAGCGAAAACCATAA
TTGCGGTTGATGTTGGGTCACGTGATGAAACTGATCTGACCAATTACGGA
GATTCTTTAAGTGGCTTCTGGATGCTGTGGAAGAAATTCAACCCATTTGC
TTCACACGTTCGAGATGTCTTTGGAGATATGTCCGGGCAAGCATGTCATT
ATCAGGTTATCTACCACCCATTTGCGATCCAGAAGATGGCCATTTATTGC
TAGATGGTGGATATGTCAACAATTTACCAGATGTTGATTCCATATTTCTG
TATCACAACTGACATTTCAAGTTCTAAAATGAAAATCCATCAAACAGTCA
GAAGATACCACCAAGGTGCGGCATTCATACCATCGACAATTCAGTGCCAC
GTAAGATCGTAAAACAGCGCCATCGTTTACCGACCTGACGCAACTAGTGG
CTGTTGTAAAGACACCCAACGTGCCGCAATCGGTGTTGGAAAAGCGCGCG
CAATTATTCGAGTACAGATCGGCAGACGAGGAGAGCGATCACAACGATGA
CCAGGTAGATTACTACGCACGACAACGAGGTGGTTCGCTCACCGAACAGG
ACATGGGTCGGGAGAATGAAAGTCAAGATGAAGGTGGTTATGAGGAAGTG
GGATACACACATGGCCAAACAGTGTTCAACACCTATTTTACCGAAAGACT
TTTTCCATCAACCAATAATGAAGAATCTCTCTCAAAGCAAAAACAACAAA
TTACCATTGTTCAAAACGCTTCAATTTGGAAGTTTTGACGAAATTCTCAT
TCCAGACATGGCAGGGATTCAGAGTCGTTTAGCGTACGTTTCATGCGTAC
GTCAACTGGAAGAAGTCAAACATGCCGATTATGTCACCTACATTCGACCG
CCTATCGACAGCTGACATCATGTTATCGATGGGAGCGAAAACCATAATTG
CGGTTGATGTTGGGTCACGTGATGAAACTGATCTGACCAATTACGGAGAT
TCTTTAAGTGGCTTCTGGATGCTGTGGAAGAAATTCAACCCATTTGCTTC
ACACGTTCGAGATGTCTTTGGAGATATGTCCGGGCAAGCATGTCATTATC
AGGTTATCTACCACCCATTTGCGATCCAGAAGATGGCCATTTATTGCTAG
ATGGTGGATATGTCAACAATTTACCAGATGTTGATTCCATATTTCTGTAT
CACAACTGACATTTCAAGTTCTAAAATGAAAATCCATCAAACAGTCAGAA
GATACCACCAAGGTGCGGCATTCATACCATCGACAATTCAGTGCCACGTA
AGATCGTAAAACAGCGCCATCGTTTACCGACCTGACGCAACTAGTGGCTG
TTGTAAAGACACCCAACGTGCCGCAATCGGTGTTGGAAAAGCGCGCGCAA
TTATTCGAGTACAGATCGGCAGACGAGGAGAGCGATCACAACGATGACCA
GGTAGATTACTACGCACGACAACGAGGTGGTTCGCTCACCGAACAGGACA
TGGGTCGGGAGAATGAAAGTCAAGATGAAGGTGGTTATGAGGAAGTGGGA
TACACACATGGCCAAACAGTGTTCAACACCTATTTTACCGAAAGACTTTT
TCCATCAACCAATAATGAAGAATCTCTCTCAAAGCAAAAACAACAAATTA
CCATTGTTCAAAACGCTTCAATTTGGAAGTTTTGACGAAATTCTCATTCC
AGACATGGCAGGGATTCAGAGTCGTTTAGCGTACGTTTCATGCGTACGTC
AACTGGAAGAAGTCAAACATGCCGATTATGTCACCTACATTCGACCGCCT
ATCGACAGCTGACATCATGTTATCGATGGGAGCGAAAACCATAATTGCGG
TTGATGTTGGGTCACGTGATGAAACTGATCTGACCAATTACGGAGATTCT
TTAAGTGGCTTCTGGATGCTGTGGAAGAAATTCAACCCATTTGCTTCACA
CGTTCGAGATGTCTTTGGAGATATGTCCGGGCAAGCATGTCATTATCAGG
TTATCTACCACCCATTTGCGATCCAGAAGATGGCCATTTATTGCTAGATG
GTGGATATGTCAACAATTTACCAGATGTTGATTCCATATTTCTGTATCAC
AACTGACATTTCAAGTTCTAAAATGAAAATCCATCAAACAGTCAGAAGAT
ACCACCAAGGTGCGGCATTCATACCATCGACAATTCAGTGCCACGTAAGA
TCGTAAAACAGCGCCATCGTTTACCGACCTGACGCAACTAGTGGCTGTTG
TAAAGACACCCAACGTGCCGCAATCGGTGTTGGAAAAGCGCGCGCAATTA
TTCGAGTACAGATCGGCAGACGAGGAGAGCGATCACAACGATGACCAGGT
AGATTACTACGCACGACAACGAGGTGGTTCGCTCACCGAACAGGACATGG
GTCGGGAGAATGAAAGTCAAGATGAAGGTGGTTATGAGGAAGTGGGATAC
ACACATGGCCAAACAGTGTTCAACACCTATTTTACCGAAAGACTTTTTCC
ATCAACCAATAATGAAGAATCTCTCTCAAAGCAAAAACAACAAATTACCA
TTGTTCAAAACGCTTCAATTTGGAAGTTTTGACGAAATTCTCATTCCAGA
CATGGCAGGGATTCAGAGTCGTTTAGCGTACGTTTCATGCGTACGTCAAC
TGGAAGAAGTCAAACATGCCGATTATGTCACCTACATTCGACCGCCTATC
GACAGCTGACATCATGTTATCGATGGGAGCGAAAACCATAATTGCGGTTG
ATGTTGGGTCACGTGATGAAACTGATCTGACCAATTACGGAGATTCTTTA
AGTGGCTTCTGGATGCTGTGGAAGAAATTCAACCCATTTGCTTCACACGT
TCGAGATGTCTTTGGAGATATGTCCGGGCAAGCATGTCATTATCAGGTTA
TCTACCACCCATTTGCGATCCAGAAGATGGCCATTTATTGCTAGATGGTG
GATATGTCAACAATTTACCAGATGTTGATTCCATATTTCTGTATCACAAC
TGACATTTCAAGTTCTAAAATGAAAATCCATCAAACAGTCAGAAGATACC
ACCAAGGTGCGGCATTCATACCATCGACAATTCAGTGCCACGTAAGATCG
TAAAACAGCGCCATCGTTTACCGACCTGACGCAACTAGTGGCTGTTGTAA
AGACACCCAACGTGCCGCAATCGGTGTTGGAAAAGCGCGCGCAATTATTC
GAGTACAGATCGGCAGACGAGGAGAGCGATCACAACGATGACCAGGTAGA
TTACTACGCACGACAACGAGGTGGTTCGCTCACCGAACAGGACATGGGTC
GGGAGAATGAAAGTCAAGATGAAGGTGGTTATGAGGAAGTGGGATACACA
CATGGCCAAACAGTGTTCAACACCTATTTTACCGAAAGACTTTTTCCATC
AACCAATAATGAAGAATCTCTCTCAAAGCAAAAACAACAAATTACCATTG
TTCAAAACGCTTCAATTTGGAAGTTTTGACGAAATTCTCATTCCAGACAT
GGCAGGGATTCAGAGTCGTTTAGCGTACGTTTCATGCGTACGTCAACTGG
AAGAAGTCAAACATGCCGATTATGTCACCTACATTCGACCGCCTATCGAC
AGCTGACATCATGTTATCGATGGGAGCGAAAACCATAATTGCGGTTGATG
TTGGGTCACGTGATGAAACTGATCTGACCAATTACGGAGATTCTTTAAGT
GGCTTCTGGATGCTGTGGAAGAAATTCAACCCATTTGCTTCACACGTTCG
AGATGTCTTTGGAGATATGTCCGGGCAAGCATGTCATTATCAGGTTATCT
ACCACCCATTTGCGATCCAGAAGATGGCCATTTATTGCTAGATGGTGGAT
ATGTCAACAATTTACCAGATGTTGATTCCATATTTCTGTATCACAACTGA
CATTTCAAGTTCTAAAATGAAAATCCATCAAACAGTCAGAAGATACCACC
AAGGTGCGGCATTCATACCATCGACAATTCAGTGCCACGTAAGATCGTAA
AACAGCGCCATCGTTTACCGACCTGACGCAACTAGTGGCTGTTGTAAAGA
CACCCAACGTGCCGCAATCGGTGTTGGAAAAGCGCGCGCAATTATTCGAG
TACAGATCGGCAGACGAGGAGAGCGATCACAACGATGACCAGGTAGATTA
CTACGCACGACAACGAGGTGGTTCGCTCACCGAACAGGACATGGGTCGGG
AGAATGAAAGTCAAGATGAAGGTGGTTATGAGGAAGTGGGATACACACAT
GGCCAAACAGTGTTCAACACCTATTTTACCGAAAGACTTTTTCCATCAAC
CAATAATGAAGAATCTCTCTCAAAGCAAAAACAACAAATTACCATTGTTC
AAAACGCTTCAATTTGGAAGTTTTGACGAAATTCTCATTCCAGACATGGC
AGGGATTCAGAGTCGTTTAGCGTACGTTTCATGCGTACGTCAACTGGAAG
AAGTCAAACATGCCGATTATGTCACCTACATTCGACCGCCTATCGACAGC
TGACATCATGTTATCGATGGGAGCGAAAACCATAATTGCGGTTGATGTTG
GGTCACGTGATGAAACTGATCTGACCAATTACGGAGATTCTTTAAGTGGC
TTCTGGATGCTGTGGAAGAAATTCAACCCATTTGCTTCACACGTTCGAGA
TGTCTTTGGAGATATGTCCGGGCAAGCATGTCATTATCAGGTTATCTACC
ACCCATTTGCGATCCAGAAGATGGCCATTTATTGCTAGATGGTGGATATG
TCAACAATTTACCAGATGTTGATTCCATATTTCTGTATCACAACTGACAT
TTCAAGTTCTAAAATGAAAATCCATCAAACAGTCAGAAGATACCACCAAG
GTGCGGCATTCATACCATCGACAATTCAGTGCCACGTAAGATCGTAAAAC
AGCGCCATCGTTTACCGACCTGACGCAACTAGTGGCTGTTGTAAAGACAC
CCAACGTGCCGCAATCGGTGTTGGAAAAGCGCGCGCAATTATTCGAGTAC
AGATCGGCAGACGAGGAGAGCGATCACAACGATGACCAGGTAGATTACTA
CGCACGACAACGAGGTGGTTCGCTCACCGAACAGGACATGGGTCGGGAGA
ATGAAAGTCAAGATGAAGGTGGTTATGAGGAAGTGGGATACACACATGGC
CAAACAGTGTTCAACACCTATTTTACCGAAAGACTTTTTCCATCAACCAA
TAATGAAGAATCTCTCTCAAAGCAAAAACAACAAATTACCATTGTTCAAA
ACGCTTCAATTTGGAAGTTTTGACGAAATTCTCATTCCAGACATGGCAGG
GATTCAGAGTCGTTTAGCGTACGTTTCATGCGTACGTCAACTGGAAGAAG
TCAAACATGCCGATTATGTCACCTACATTCGACCGCCTATCGACAGCTGA
CATCATGTTATCGATGGGAGCGAAAACCATAATTGCGGTTGATGTTGGGT
CACGTGATGAAACTGATCTGACCAATTACGGAGATTCTTTAAGTGGCTTC
TGGATGCTGTGGAAGAAATTCAACCCATTTGCTTCACACGTTCGAGATGT
CTTTGGAGATATGTCCGGGCAAGCATGTCATTATCAGGTTATCTACCACC
CATTTGCGATCCAGAAGATGGCCATTTATTGCTAGATGGTGGATATGTCA
ACAATTTACCAGATGTTGATTCCATATTTCTGTATCACAACTGACATTTC
AAGTTCTAAAATGAAAATCCATCAAACAGTCAGAAGATACCACCAAGGTG
CGGCATTCATACCATCGACAATTCAGTGCCACGTAAGATCGTAAAACAGC
GCCATCGTTTACCGACCTGACGCAACTAGTGGCTGTTGTAAAGACACCCA
ACGTGCCGCAATCGGTGTTGGAAAAGCGCGCGCAATTATTCGAGTACAGA
TCGGCAGACGAGGAGAGCGATCACAACGATGACCAGGTAGATTACTACGC
ACGACAACGAGGTGGTTCGCTCACCGAACAGGACATGGGTCGGGAGAATG
AAAGTCAAGATGAAGGTGGTTATGAGGAAGTGGGATACACACATGGCCAA
ACAGTGTTCAACACCTATTTTACCGAAAGACTTTTTCCATCAACCAATAA
TGAAGAATCTCTCTCAAAGCAAAAACAACAAATTACCATTGTTCAAAACG
CTTCAATTTGGAAGTTTTGACGAAATTCTCATTCCAGACATGGCAGGGAT
TCAGAGTCGTTTAGCGTACGTTTCATGCGTACGTCAACTGGAAGAAGTCA
AACATGCCGATTATGTCACCTACATTCGACCGCCTATCGACAGCTGACAT
CATGTTATCGATGGGAGCGAAAACCATAATTGCGGTTGATGTTGGGTCAC
GTGATGAAACTGATCTGACCAATTACGGAGATTCTTTAAGTGGCTTCTGG
ATGCTGTGGAAGAAATTCAACCCATTTGCTTCACACGTTCGAGATGTCTT
TGGAGATATGTCCGGGCAAGCATGTCATTATCAGGTTATCTACCACCCAT
TTGCGATCCAGAAGATGGCCATTTATTGCTAGATGGTGGATATGTCAACA
ATTTACCAGATGTTGATTCCATATTTCTGTATCACAACTGACATTTCAAG
TTCTAAAATGAAAATCCATCAAACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039825XLOC_039825Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063530-exon-scaffold_392-1575043694:75765..75848TCONS_00063530-exon-scaffold_392-1575043694:75765..75848Clytia hemisphaericaexon
TCONS_00063530-exon-scaffold_392-1575043694:73664..73780TCONS_00063530-exon-scaffold_392-1575043694:73664..73780Clytia hemisphaericaexon
TCONS_00063530-exon-scaffold_392-1575043694:73289..73437TCONS_00063530-exon-scaffold_392-1575043694:73289..73437Clytia hemisphaericaexon
TCONS_00063530-exon-scaffold_392-1575043694:68412..68524TCONS_00063530-exon-scaffold_392-1575043694:68412..68524Clytia hemisphaericaexon
TCONS_00063530-exon-scaffold_392-1575043694:68125..68164TCONS_00063530-exon-scaffold_392-1575043694:68125..68164Clytia hemisphaericaexon
TCONS_00063530-exon-scaffold_392-1575043694:67639..67752TCONS_00063530-exon-scaffold_392-1575043694:67639..67752Clytia hemisphaericaexon
TCONS_00063530-exon-scaffold_392-1575043694:65083..65322TCONS_00063530-exon-scaffold_392-1575043694:65083..65322Clytia hemisphaericaexon
TCONS_00063530-exon-scaffold_392-1575043694:63481..64730TCONS_00063530-exon-scaffold_392-1575043694:63481..64730Clytia hemisphaericaexon
TCONS_00063530-exon-scaffold_392-1510915933:75765..75848TCONS_00063530-exon-scaffold_392-1510915933:75765..75848Clytia hemisphaericaexon
TCONS_00063530-exon-scaffold_392-1510915933:73664..73780TCONS_00063530-exon-scaffold_392-1510915933:73664..73780Clytia hemisphaericaexon
TCONS_00063530-exon-scaffold_392-1510915933:73289..73437TCONS_00063530-exon-scaffold_392-1510915933:73289..73437Clytia hemisphaericaexon
TCONS_00063530-exon-scaffold_392-1510915933:68412..68524TCONS_00063530-exon-scaffold_392-1510915933:68412..68524Clytia hemisphaericaexon
TCONS_00063530-exon-scaffold_392-1510915933:68125..68164TCONS_00063530-exon-scaffold_392-1510915933:68125..68164Clytia hemisphaericaexon
TCONS_00063530-exon-scaffold_392-1510915933:67639..67752TCONS_00063530-exon-scaffold_392-1510915933:67639..67752Clytia hemisphaericaexon
TCONS_00063530-exon-scaffold_392-1510915933:65083..65322TCONS_00063530-exon-scaffold_392-1510915933:65083..65322Clytia hemisphaericaexon
TCONS_00063530-exon-scaffold_392-1510915933:63481..64730TCONS_00063530-exon-scaffold_392-1510915933:63481..64730Clytia hemisphaericaexon
TCONS_00063530-exon-scaffold_392-1491911889:75765..75848TCONS_00063530-exon-scaffold_392-1491911889:75765..75848Clytia hemisphaericaexon
TCONS_00063530-exon-scaffold_392-1491911889:73664..73780TCONS_00063530-exon-scaffold_392-1491911889:73664..73780Clytia hemisphaericaexon
TCONS_00063530-exon-scaffold_392-1491911889:73289..73437TCONS_00063530-exon-scaffold_392-1491911889:73289..73437Clytia hemisphaericaexon
TCONS_00063530-exon-scaffold_392-1491911889:68412..68524TCONS_00063530-exon-scaffold_392-1491911889:68412..68524Clytia hemisphaericaexon
TCONS_00063530-exon-scaffold_392-1491911889:68125..68164TCONS_00063530-exon-scaffold_392-1491911889:68125..68164Clytia hemisphaericaexon
TCONS_00063530-exon-scaffold_392-1491911889:67639..67752TCONS_00063530-exon-scaffold_392-1491911889:67639..67752Clytia hemisphaericaexon
TCONS_00063530-exon-scaffold_392-1491911889:65083..65322TCONS_00063530-exon-scaffold_392-1491911889:65083..65322Clytia hemisphaericaexon
TCONS_00063530-exon-scaffold_392-1491911889:63481..64730TCONS_00063530-exon-scaffold_392-1491911889:63481..64730Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063530-proteinTCONS_00063530-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_392supercontigscaffold_392:63481..75848 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.30864	5.65062	4.48682	3.95483	15.1245	11.2345	14.8516	15.1188	9.46667	11.1407	12.0254	9.12503	8.9756	10.07	7.46167	11.4816	10.468	10.2835	6.71613	10.3548	11.1508	10.8956	8.98004	11.009	20.8918	21.5291	14.2507	11.9536	12.5933	10.6323
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002641PNPLA_dom
IPR016035Acyl_Trfase/lysoPLipase
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0008152metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006629 lipid metabolic process
biological_process GO:0008152 metabolic process
Blast
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BLAST of TCONS_00063530 vs. Swiss-Prot (Human)
Match: PLPL7 (Patatin-like phospholipase domain-containing protein 7 OS=Homo sapiens GN=PNPLA7 PE=1 SV=3)

HSP 1 Score: 290.812 bits (743), Expect = 3.885e-84
Identity = 131/230 (56.96%), Postives = 172/230 (74.78%), Query Frame = 3 
Query:    9 FQDMLIPYFCITTDISSSKMKIHQTGCLWRYVRASMSLSGYLPPICDPEDGHLLLDGGYVNNLPADIMLSMGAKTIIAVDVGSRDETDLTNYGDSLSGFWMLWKKFNPFASHVRIPDMAGIQSRLAYVSCVRQLEEVKHADYVTYIRPPIDRFKTLQFGSFDEILEVGYTHGQTVFNTYFTERLFPSTNNEESLSKQKQQITIDRKTAPSFTDLTQLVAVVKTPNVPQSV 698
             +D+ IPYF ITTDI++S M++H  G LW YVRASMSLSGY+PP+CDP+DGHLL+DGGY+NNLPAD+  SMGAK +IA+DVGSRDETDLTNYGD+LSG+W+LWK++NP A+ V++ +MA IQ+RLAYV CVRQLE VK +DY  Y+RPPID + TL FG F+EI EVGY HG+TVF+ +    +      ++    +K    +      SFTDL ++V+ ++ P  P  V
Sbjct: 1026 IEDLWIPYFAITTDITASAMRVHTDGSLWWYVRASMSLSGYMPPLCDPKDGHLLMDGGYINNLPADVARSMGAKVVIAIDVGSRDETDLTNYGDALSGWWLLWKRWNPLATKVKVLNMAEIQTRLAYVCCVRQLEVVKSSDYCEYLRPPIDSYSTLDFGKFNEICEVGYQHGRTVFDIWGRSGVLEKMLRDQQGPSKKPASAVLTCPNASFTDLAEIVSRIE-PAKPAMV 1254
The following BLAST results are available for this feature:
BLAST of TCONS_00063530 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PLPL73.885e-8456.96Patatin-like phospholipase domain-containing prote... [more]
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