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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063645 ID=TCONS_00063645|Name=TCONS_00063645|organism=Clytia hemisphaerica|type=transcript|length=702bp
ACCAAATCATTCCTCCTACACCAATTGATTTGCCATCTTTGGAAAGTGAT
TCTGGAGGATCGCTGCCACTGAAGGTGAAGCCTTTTAAACCGAATCCACC
TCTACAGAGTGAGATTTCCATTTGGTCGGCTCTTTCCATGGCGGTTTTGA
GATTGTCTTCTCCAGTGATACAGTCGTCGACATAGAGATCGAAGTTGACA
ATGTGATCGATCTCAGGGAATTCGTTTTTGGATAGTGCTGACGTTTGTCG
TATTGCTCGCTCTGCCTGGTTGCCGCTCGACTTAACCCCATAAATCAAgg
ttttgataactttttcttCCGGAGGTTGGTTGGGATGAAGATCGTTGTTC
CACAAGTATCGTTGGTAGCACCATTGGCTTTGATCGAGTTTGATTGCGTT
GTACATTTTGGTTACGTTAGTATGAAATGCGACTTTGTGACAGGGTGGTA
TCGTAGGTATCGTATGCCAATCATGAAGTCGACGTCACCTCCAACGGATG
ATGGAAGCTTTGGTAATGTTGACGGATTCCCACCACTCCGATGAAATGCA
TCATGGATATCATCTTTGACTTGACCATCGAGAGGGTAATTCGAAAATGT
TGAAGTGATCTTCTTGAGAGCGGCACCGGTGAGTGTCACATTTGAGCCGT
CAAAGGTTGGTAGATCGATACTGTAGATGCCCTTGGATGACAGTGTTGAT
AC Run BLAST on NCBI transcript from alignment at scaffold_397:244794..245812+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063645 ID=TCONS_00063645|Name=TCONS_00063645|organism=Clytia hemisphaerica|type=transcript|length=1019bp|location=Sequence derived from alignment at scaffold_397:244794..245812+ (Clytia hemisphaerica)
ACCAAATCATTCCTCCTACACCAATTGATTTGCCATCTTTGGAAAGTGAT
TCTGGAGGATCGCTGCCACTGAAGGTGAAGCCTTTTAAACCGAATCCACC
TCTACAGAGTGAGATTTCCATTTGGTCGGCTCTTCCCATGGCGGTTTTGT
GATTGTCTTCTCCAGTGATGCAGTCGTCGACATAGAGATCGAAGTTGACA
ATGTGATCGATCTCAGGGAATTCGTCTTTGGATAGTGCTGACGTTTATCG
TATGGCTCGCTCTGCCTGGTTGCCGCTCGACTTAACCCCATAAAACTAGG
TTTTGATCACTTTTTTTCCGGAGGTTGGTTGGGATGAAGATCGTTGTTCC
ACAAGTATCGTTGGTAGCACCATTGGCTTTGATCGAGTTTGATTGCGTTG
TACATTTTGGTTACGTCAGTATGAAATGCGACTTTGTGANGGTCGGCTCT
TTCCATGGCGGTTTTGAGATTGTCTTCTCCAGTGATACAGTCGTCGACAT
AGAGATCGAAGTTGACAATGTGATCGATCTCAGGGAATTCGTTTTTGGAT
AGTGCTGACGTTTGTCGTATTGCTCGCTCTGCCTGGTTGCCGCTCGACTT
AACCCCATAAATCAAggttttgataactttttcttCCGGAGGTTGGTTGG
GATGAAGATCGTTGTTCCACAAGTATCGTTGGTAGCACCATTGGCTTTGA
TCGAGTTTGATTGCGTTGTACATTTTGGTTACGTTAGTATGAAATGCGAC
TTTGTGACAGGGTGGTATCGTAGGTATCGTATGCCAATCATGAAGTCGAC
GTCACCTCCAACGGATGATGGAAGCTTTGGTAATGTTGACGGATTCCCAC
CACTCCGATGAAATGCATCATGGATATCATCTTTGACTTGACCATCGAGA
GGGTAATTCGAAAATGTTGAAGTGATCTTCTTGAGAGCGGCACCGGTGAG
TGTCACATTTGAGCCGTCAAAGGTTGGTAGATCGATACTGTAGATGCCCT
TGGATGACAGTGTTGATAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063645-exon-scaffold_397-1491911889:244794..244917 | TCONS_00063645-exon-scaffold_397-1491911889:244794..244917 | Clytia hemisphaerica | exon |
| TCONS_00063645-exon-scaffold_397-1510915933:244794..244917 | TCONS_00063645-exon-scaffold_397-1510915933:244794..244917 | Clytia hemisphaerica | exon |
| TCONS_00063645-exon-scaffold_397-1575043694:244794..244917 | TCONS_00063645-exon-scaffold_397-1575043694:244794..244917 | Clytia hemisphaerica | exon |
| TCONS_00063645-exon-scaffold_397-1491911889:245235..245812 | TCONS_00063645-exon-scaffold_397-1491911889:245235..245812 | Clytia hemisphaerica | exon |
| TCONS_00063645-exon-scaffold_397-1510915933:245235..245812 | TCONS_00063645-exon-scaffold_397-1510915933:245235..245812 | Clytia hemisphaerica | exon |
| TCONS_00063645-exon-scaffold_397-1575043694:245235..245812 | TCONS_00063645-exon-scaffold_397-1575043694:245235..245812 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_397 | supercontig | scaffold_397:244794..245812 + |
Blast
The following BLAST results are available for this feature:
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