TCONS_00063668 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063668
Unique NameTCONS_00063668
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length172

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063668 ID=TCONS_00063668|Name=TCONS_00063668|organism=Clytia hemisphaerica|type=transcript|length=172bp
ttcgcACGACGTCTCGCGTCTATCGTTTTAGTGAGTACGGCGCCTCAAAT
AATCTTACTCAAAATGTCCTGCTCTTTCCAACGGTAGCTAAACGAGCTTT
TTGGGAAGGCTTAATCCTCGAGATATCCTTGTTTGAGAATGGTCATCAAC
ATTGGCCACTCCGTGGATTTTG
Run BLAST on NCBI

transcript from alignment at scaffold_397:175481..175652

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063668 ID=TCONS_00063668|Name=TCONS_00063668|organism=Clytia hemisphaerica|type=transcript|length=172bp|location=Sequence derived from alignment at scaffold_397:175481..175652 (Clytia hemisphaerica)
CAAAATCCACGGAGTGGCCAATGTTGATGACCATTCTCAAACAAGGATAT
CTCGAGGATTAAGCCTTCCCAAAAAGCTCGTTTAGCTACCGTTGGAAAGA
GCAGGACATTTTGAGTAAGATTATTTGAGGCGCCGTACTCACTAAAACGA
TAGACGCGAGACGTCGTgcgaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039910XLOC_039910Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063668-exon-scaffold_397-1491911889:175481..175652TCONS_00063668-exon-scaffold_397-1491911889:175481..175652Clytia hemisphaericaexon
TCONS_00063668-exon-scaffold_397-1510915933:175481..175652TCONS_00063668-exon-scaffold_397-1510915933:175481..175652Clytia hemisphaericaexon
TCONS_00063668-exon-scaffold_397-1575043694:175481..175652TCONS_00063668-exon-scaffold_397-1575043694:175481..175652Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_397supercontigscaffold_397:175481..175652 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063668 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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