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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063746 ID=TCONS_00063746|Name=TCONS_00063746|organism=Clytia hemisphaerica|type=transcript|length=1295bp
tactttaaaaggtcattcgcgaaagtttatgctagCAAAAAAATCTTGAC
AACATGGAAAAAGCtgcaaaacttaaaataaaaagtaagaaTTATGGATT
TATGGCACAAGTCTGTTAAAGTCTAAGTCAAAAGGCAAATGTTTCAATCC
AATTCCAGAAGTACTAATTCCTCTAGGCCATTTTTTATGCCTCATTCTCG
AAAGTTTATACTCGCGAAAAAGATTTATTCGTCAANTTTTATGCCTCATT
CTCGAAAGTTTATACTCGCGAAAAAGATTTATtcgtcaaattcgcgaaag
taaatgtcgtaaattttgcgatttttcgcctttgcgatttttcgacctcg
cgaaagtttctgctcgcgaaagtttgtacgcctaataAAGCATGTAGAGC
GATTCACATTGTATATAGAGGGGTCACTCCCCATTTATATTGTATCTCTC
TTTTTTTAAAACACCACGAACCTGCACTTTTTATAGTGGCGGTTTAGGCG
CGGTTAATAAACTGTTTCAATACGCAAAAAGCATAGTGTCATCTGACTCT
TTCATGCATCAGGAAAGTTGGATCTTGTAAGTATTGTAAGTATTCAATAG
CACTTTGTATGCAAACGTCGTGATTATAGATGTTTTGGCGAACGCGACAG
TCTTTTGAATAACTAACTACTTCACATACATTACTTTCCCTCTGCCAATA
AAAACATGATTAATTATCTTGTCTCTAGGTAACTGCTGTGGATTAATTAC
CGTGCAGTACCGAGAGATCGGCTAACTTGCATTAGTGGAGGCTAACATGC
ATAGCCCTAAAAATGAATGGCCTGGCTGGTCATTCAAATACAAAGTTAAA
TCAAGACAAAAATGGTAGAGTAGAGCTGTAAGCAGAGCTGCGTAGTTCAT
TTGTTTTGAAATTTTGCTGCTTTGATTGATCAGTCATTTGATGGCTTTGC
AACTTTCCTTCCACAGATGCAAGCTACCCAATCTCACgctagttattcaa
aagacagTTGCATTCGCCAAAACAACTATTACTTCTTTCATCTGAACGaa
attcaatagaccttttcgcctttccatccgccatattaaattgtatgcaa
aaaattATTGTGGCCGAATTGCCATGGTGAGATTGCATTGCTGACGGTAa
accgccaaatgatcaaatcaaaacataaacttacataggttttgcatact
ttccaactaaaccCAACCACAGCTTTTTCATTCAtgaatttttgcataca
attgaagatggcggatggaaaggcaaaaaggtccATCCAACAATC Run BLAST on NCBI transcript from alignment at scaffold_4:46302..47596 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063746 ID=TCONS_00063746|Name=TCONS_00063746|organism=Clytia hemisphaerica|type=transcript|length=1295bp|location=Sequence derived from alignment at scaffold_4:46302..47596 (Clytia hemisphaerica)
GATTGTTGGATggacctttttgcctttccatccgccatcttcaattgtat
gcaaaaattcaTGAATGAAAAAGCTGTGGTTGggtttagttggaaagtat
gcaaaacctatgtaagtttatgttttgatttgatcatttggcggttTACC
GTCAGCAATGCAATCTCACCATGGCAATTCGGCCACAATaattttttgca
tacaatttaatatggcggatggaaaggcgaaaaggtctattgaatttCGT
TCAGATGAAAGAAGTAATAGTTGTTTTGGCGAATGCAActgtcttttgaa
taactagcGTGAGATTGGGTAGCTTGCATCTGTGGAAGGAAAGTTGCAAA
GCCATCAAATGACTGATCAATCAAAGCAGCAAAATTTCAAAACAAATGAA
CTACGCAGCTCTGCTTACAGCTCTACTCTACCATTTTTGTCTTGATTTAA
CTTTGTATTTGAATGACCAGCCAGGCCATTCATTTTTAGGGCTATGCATG
TTAGCCTCCACTAATGCAAGTTAGCCGATCTCTCGGTACTGCACGGTAAT
TAATCCACAGCAGTTACCTAGAGACAAGATAATTAATCATGTTTTTATTG
GCAGAGGGAAAGTAATGTATGTGAAGTAGTTAGTTATTCAAAAGACTGTC
GCGTTCGCCAAAACATCTATAATCACGACGTTTGCATACAAAGTGCTATT
GAATACTTACAATACTTACAAGATCCAACTTTCCTGATGCATGAAAGAGT
CAGATGACACTATGCTTTTTGCGTATTGAAACAGTTTATTAACCGCGCCT
AAACCGCCACTATAAAAAGTGCAGGTTCGTGGTGTTTTAAAAAAAGAGAG
ATACAATATAAATGGGGAGTGACCCCTCTATATACAATGTGAATCGCTCT
ACATGCTTtattaggcgtacaaactttcgcgagcagaaactttcgcgagg
tcgaaaaatcgcaaaggcgaaaaatcgcaaaatttacgacatttactttc
gcgaatttgacgaATAAATCTTTTTCGCGAGTATAAACTTTCGAGAATGA
GGCATAAAANTTGACGAATAAATCTTTTTCGCGAGTATAAACTTTCGAGA
ATGAGGCATAAAAAATGGCCTAGAGGAATTAGTACTTCTGGAATTGGATT
GAAACATTTGCCTTTTGACTTAGACTTTAACAGACTTGTGCCATAAATCC
ATAAttcttactttttattttaagttttgcaGCTTTTTCCATGTTGTCAA
GATTTTTTTGctagcataaactttcgcgaatgaccttttaaagta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063746-exon-scaffold_4-1491911889:46302..47596 | TCONS_00063746-exon-scaffold_4-1491911889:46302..47596 | Clytia hemisphaerica | exon |
| TCONS_00063746-exon-scaffold_4-1510915933:46302..47596 | TCONS_00063746-exon-scaffold_4-1510915933:46302..47596 | Clytia hemisphaerica | exon |
| TCONS_00063746-exon-scaffold_4-1575043694:46302..47596 | TCONS_00063746-exon-scaffold_4-1575043694:46302..47596 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_4 | supercontig | scaffold_4:46302..47596 . |
Blast
The following BLAST results are available for this feature:
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