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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063749 ID=TCONS_00063749|Name=TCONS_00063749|organism=Clytia hemisphaerica|type=transcript|length=857bp
AAGATCGATGGGTGGCATTCTTTTCAATCGTGCATAAATTTTTCCTTGTC
CTGCTAACTTCTTTAACTGATCGTAGTCATATGAGAACCCTGAAGCAACA
GATGGGGCGTAGATTCTATTTTTATACCTTTTCACAAAAACAAAGTCATC
ATCTTTGAAGGCTATCTCTCCTCTACAGGATCTAACAATTGTTGTCCGTA
TTTCTGATTCCAACATGTTGCTGTGTAGCGTCAGCATGGTTCTGGCACAA
ACTAAAACCTCAGCAAAAGGGTAGTTTTCAATGGCATCCTCTTTAGGAAG
CAACATTGTGAGTTCGTGAGTACTCTCCTTAGGAGCTTTTCTCTTTCCTC
CAGTCAAAATCCGATTTGGATGAGCCGGGGAAGTATTTGTAGTGTTTAAA
TTGTTGGCACTAGCAGCTGCATTTCTAATCAATGATCTTGTCCTAGCAAC
CAAGTTTGCCATGTTTGATGGATTTGGAGGCAAAGGAGATGTTCGAGGAG
GGGGAGAGCCAACCATCTCTTCCACCCTCTCTTCCACAACATTGCgaata
aatgttcttaattgGTCATTTTCTTCCATTGTAATTCTTAAATGAAATAG
AtatgaaagagaaaaaatgataaaaataatattgaattaAAAATGCTTCT
AATgtattttccaaatcttttcaaACACAACACTTTTTCACCAGGTAGAT
TTGATGGCATTTGATAAGTTCAAGCTGGTTTTTAATtgtttaccttaagg
gaagaaaattTTGTGGCATTTAATTTAGCGGTTGAAGGCATTTTAAGTTA
GGCTAATCTAGCCTCAAAATATGGAATTTAGAGGTAAAATTTCCGAACGT
AAGATTT Run BLAST on NCBI protein sequence of TCONS_00063749-protein >TCONS_00063749-protein ID=TCONS_00063749-protein|Name=TCONS_00063749-protein|organism=Clytia hemisphaerica|type=polypeptide|length=193bp
MEENDQLRTFIRNVVEERVEEMVGSPPPRTSPLPPNPSNMANLVARTRSL
IRNAAASANNLNTTNTSPAHPNRILTGGKRKAPKESTHELTMLLPKEDAI
ENYPFAEVLVCARTMLTLHSNMLESEIRTTIVRSCRGEIAFKDDDFVFVK
RYKNRIYAPSVASGFSYDYDQLKKLAGQGKIYARLKRMPPIDL Run BLAST on NCBI transcript from alignment at scaffold_4:124645..125501 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063749 ID=TCONS_00063749|Name=TCONS_00063749|organism=Clytia hemisphaerica|type=transcript|length=857bp|location=Sequence derived from alignment at scaffold_4:124645..125501 (Clytia hemisphaerica)
AAATCTTACGTTCGGAAATTTTACCTCTAAATTCCATATTTTGAGGCTAG
ATTAGCCTAACTTAAAATGCCTTCAACCGCTAAATTAAATGCCACAAaat
tttcttcccttaaggtaaacaATTAAAAACCAGCTTGAACTTATCAAATG
CCATCAAATCTACCTGGTGAAAAAGTGTTGTGTttgaaaagatttggaaa
atacATTAGAAGCATTTTtaattcaatattatttttatcattttttctct
ttcataTCTATTTCATTTAAGAATTACAATGGAAGAAAATGACcaattaa
gaacatttattcGCAATGTTGTGGAAGAGAGGGTGGAAGAGATGGTTGGC
TCTCCCCCTCCTCGAACATCTCCTTTGCCTCCAAATCCATCAAACATGGC
AAACTTGGTTGCTAGGACAAGATCATTGATTAGAAATGCAGCTGCTAGTG
CCAACAATTTAAACACTACAAATACTTCCCCGGCTCATCCAAATCGGATT
TTGACTGGAGGAAAGAGAAAAGCTCCTAAGGAGAGTACTCACGAACTCAC
AATGTTGCTTCCTAAAGAGGATGCCATTGAAAACTACCCTTTTGCTGAGG
TTTTAGTTTGTGCCAGAACCATGCTGACGCTACACAGCAACATGTTGGAA
TCAGAAATACGGACAACAATTGTTAGATCCTGTAGAGGAGAGATAGCCTT
CAAAGATGATGACTTTGTTTTTGTGAAAAGGTATAAAAATAGAATCTACG
CCCCATCTGTTGCTTCAGGGTTCTCATATGACTACGATCAGTTAAAGAAG
TTAGCAGGACAAGGAAAAATTTATGCACGATTGAAAAGAATGCCACCCAT
CGATCTT Coding sequence (CDS) from alignment at scaffold_4:124645..125501 >TCONS_00063749 ID=TCONS_00063749|Name=TCONS_00063749|organism=Clytia hemisphaerica|type=CDS|length=579bp|location=Sequence derived from alignment at scaffold_4:124645..125501 (Clytia hemisphaerica)
ATGGAAGAAAATGACcaattaagaacatttattcGCAATGTTGTGGAAGA
GAGGGTGGAAGAGATGGTTGGCTCTCCCCCTCCTCGAACATCTCCTTTGC
CTCCAAATCCATCAAACATGGCAAACTTGGTTGCTAGGACAAGATCATTG
ATTAGAAATGCAGCTGCTAGTGCCAACAATTTAAACACTACAAATACTTC
CCCGGCTCATCCAAATCGGATTTTGACTGGAGGAAAGAGAAAAGCTCCTA
AGGAGAGTACTCACGAACTCACAATGTTGCTTCCTAAAGAGGATGCCATT
GAAAACTACCCTTTTGCTGAGGTTTTAGTTTGTGCCAGAACCATGCTGAC
GCTACACAGCAACATGTTGGAATCAGAAATACGGACAACAATTGTTAGAT
CCTGTAGAGGAGAGATAGCCTTCAAAGATGATGACTTTGTTTTTGTGAAA
AGGTATAAAAATAGAATCTACGCCCCATCTGTTGCTTCAGGGTTCTCATA
TGACTACGATCAGTTAAAGAAGTTAGCAGGACAAGGAAAAATTTATGCAC
GATTGAAAAGAATGCCACCCATCGATCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063749-exon-scaffold_4-1491911889:124645..125501 | TCONS_00063749-exon-scaffold_4-1491911889:124645..125501 | Clytia hemisphaerica | exon |
| TCONS_00063749-exon-scaffold_4-1510915933:124645..125501 | TCONS_00063749-exon-scaffold_4-1510915933:124645..125501 | Clytia hemisphaerica | exon |
| TCONS_00063749-exon-scaffold_4-1575043694:124645..125501 | TCONS_00063749-exon-scaffold_4-1575043694:124645..125501 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_4 | supercontig | scaffold_4:124645..125501 . |
Blast
The following BLAST results are available for this feature:
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