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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063830 ID=TCONS_00063830|Name=TCONS_00063830|organism=Clytia hemisphaerica|type=transcript|length=744bp
tatttggaactaaatgttttgcttgcaacttgcgaatcgaggtggctctg
gatcgcttcgcaacttttatacatatacggcttgtttcggaaaatttttt
taaaatataaactACTTTTACGCCTTGATTTTTTACATGTTCTTGCTATA
CATTTGAAATTTAACACAATGTGAAAGGGTGGTTGGGTGGACCAGACTCT
TTAtgcttttataagcataacacttaGCATATTCCAGGCTCGGATATGGA
GAAAATTGAATGTAAGTTTTCACCAATTTTGTATTGATTTTCGCGAGCCA
ATTTCTTTCATAAATAAGGACTTGTTTTCACGAGCACAAAAAATATTTAC
GCGAGGATAACATTTCGCGAATCGGCCCCTTTTTGAactaatttctttta
ttttctttcctaaGGGTTTCGACAAAAGTTACGATTAGtttttcgcgagg
attatatttcgcgaattttgaggAAAACTCTAATCTTCACgcaaattaat
ccacttaaggtacaaCCAGAGCAGCAAATGGAAGCAAATTTTAAGCAGGG
GGGTCTGTTCTATGTTTCCAGCACTTTCGCAGCCTCAAGTGTAACGCTGT
TGGGTTCTGTGTGCCTTTTTCCTtcttggttttattttttatttcaggtt
GTTACCCTTCAAGTAACCTCAAATGGATCGAAAATTCAAGACTTCACATA
ACCTATTTCAATGTAGAAAGATCAGATGTCACAGAAGATTGGAT Run BLAST on NCBI transcript from alignment at scaffold_403:33036..34290+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063830 ID=TCONS_00063830|Name=TCONS_00063830|organism=Clytia hemisphaerica|type=transcript|length=1255bp|location=Sequence derived from alignment at scaffold_403:33036..34290+ (Clytia hemisphaerica)
tatttggaactaaatgttttgcttgcaacttgcgaatcgaggtggctctg
gatcgcttcgcaacttttatacatatacggcttgtttcggaaaatttttt
taaaatataaactACTTTTACGCCTTGATTTTTTACATGTTCTTGCTATA
CATTTGAAATTTAACACAATGTGAAAGGGTGGTTGGGTGGACCAGACTCT
TTAtgcttttataagcataacacttaGCATATTCCAGGCTCGGATATGGA
GAAAATTGAATGTAAGTTTTCACCAATTTTGTATTGATTTTCGCGAGCCA
ATTTCTTTCATAAATAAGGACTTGTTTTCACGAGCACAAAAAATATTTAC
GCGAGGATAACATTTCGCGAATCGGCCCCTTTTTGAactaatttctttta
ttttctttcctaaGGGTTTCGACAAAAGTTACGATTAGtttttcgcgagg
attatatttcgcgaattttgaggAAAACTCTAATCTTCACgcaaattaat
ccacttaaggtacaaCCAGAGCAGCAAATGGAAGCAAATTTTAAGCAGGG
GGGTCTGTTCTATGTTTCCAGCACTTTCGCAGCCTCAAGTGTAACGCTGT
TGGGTTCTGTGTGCCTTTTTCCTtcttggttttattttttatttcaggtt
GTTACCCTTCAAGTAACCTCAAATGGATCGAAAATTCAAGACTTCACATA
ACCTATTTCAATGTAAGGGAtggtttgtattttttttgattgaattcttC
CTGTTTTGTCTTAAAGTCCGTCCATTTTCATTTGGAATAATCGTTGACGA
TTTTTATCAGATACGTTATAAAGGTCATGAANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNAGTTattatccaaatgaaaatggCTGGAATCTTGTCAAAC
CTTCATTACTCTTAGCGTATCACATAGTTTTCATTACCAGTAAGGATACA
GTAAGAAAGATTGTGTATTGTGTAAAGTTTTATGTATTTGATATTGGTTT
TACTATTTAATCTGATTTTCCAGGTAGAAAGATCAGATGTCACAGAAGAT
TGGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063830-exon-scaffold_403-1491911889:33036..33747 | TCONS_00063830-exon-scaffold_403-1491911889:33036..33747 | Clytia hemisphaerica | exon |
| TCONS_00063830-exon-scaffold_403-1510915933:33036..33747 | TCONS_00063830-exon-scaffold_403-1510915933:33036..33747 | Clytia hemisphaerica | exon |
| TCONS_00063830-exon-scaffold_403-1575043694:33036..33747 | TCONS_00063830-exon-scaffold_403-1575043694:33036..33747 | Clytia hemisphaerica | exon |
| TCONS_00063830-exon-scaffold_403-1491911889:34259..34290 | TCONS_00063830-exon-scaffold_403-1491911889:34259..34290 | Clytia hemisphaerica | exon |
| TCONS_00063830-exon-scaffold_403-1510915933:34259..34290 | TCONS_00063830-exon-scaffold_403-1510915933:34259..34290 | Clytia hemisphaerica | exon |
| TCONS_00063830-exon-scaffold_403-1575043694:34259..34290 | TCONS_00063830-exon-scaffold_403-1575043694:34259..34290 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_403 | supercontig | scaffold_403:33036..34290 + |
Blast
The following BLAST results are available for this feature:
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