TCONS_00063860 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063860
Unique NameTCONS_00063860
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2895

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063860 ID=TCONS_00063860|Name=TCONS_00063860|organism=Clytia hemisphaerica|type=transcript|length=2895bp
GCCTTAATGAGCTGATTTTATAGTgaATGCTTTCAAAAAGATGCAATCAT
ATTCATggaattaattcaaaatttggtattaaATAGAGAAGGAAAAAAGT
GGAAACAACGATGGGCATGTTTAAAGCGGGCATCACCTAAAAACTCTCAA
GCTACAAATGAagataaTTTCCTTTATGATTTGTACGTGTTTCTTTATAA
AAGTGAAGAACATGCCCATGAAGGGAAAAACGCAAAACTTGTCATCCCTC
TGACTGACTTTTGCGGTGTAGAGGCACGCAAAGACTACGACAAATCAAAT
AATGTTTTGGTTTTGATAACCACTTCACAAACCTCTTTCTTATCCTTTGA
TAATGCTCTGTTACGTGATCAATGGATGCGAGCATTAGAAGACCAATTTG
GTAAAGTTACTGCTTTCAACATAAACATACCAGAcaaacagaagaaaaag
aatgCAGAATCAACAATAAGGATTTACAGAAACTTCTTTTCAATTAcaaa
taaaaatcttaaatgTATAAACAGATGGTATACCAAGGACATAAAAAGCT
TCTCTAGAGGGGAGGACTCGCAGTTCATGTTCGAAATCTGTCCTGAACAT
AAGACTAAAGGACTCCTTGTAAATATTGTGACTCCAAATGCCAATGAACT
TCTCGGAGCTTTTGAAGAAATCAAAGCTGACCAGGATGAGCCAGTTTTGA
CTCAACGAGATTTCACAGGCTCATCTGTCCTCATTGACCTTGAGCAAGCC
AAAAGAGGAGGAGCTGATGGTAATTTCATACGAAGAGCAATTTTGCGGGC
CAGTGATCGATTACGGCGAAAACACAGAGACAGGACACGCAGTACGCCAA
TGACAAGAAAAAACTTCAGATCGCCTAGAGCTGCTACAAATTCAATGAGT
GACGAGGCAAAATATTGTAGTCTCGATAGAAGAAAAAGCCCTGACCTGGG
TATACAAATAAACAATGAAAGTCGAGATAAGACAATTAATCTAATTCGGA
GTACATCATCTCCTTCAGGTAGTCCAATAAAGAAAGCGTTCAGTAAACAA
ATAAGTGTTGACGAATCAGCACCCATTCTACAACCAAAAAAGAAATCACC
AAGCTCCTCAAGTAGTTCACAACCTGTCCATATAGAAGGGAAAGTAGATT
CACGAAATACTAATGAAAGGACATTACTTAAACCAAGAAGTATGACGATA
GGTGATATTCCTGTACCTAAGGAACTTGCATCAACATCTAAAGACCAAAC
AACCAAATCTGAGGAGAAAATACCGTTAGGTCTAGAACCAAGAATGAAAG
ACAAACCAGAATATATTCTAACAGCAGAAGAGGCTAAAAAATTTCGAATG
ACTATGTCTCCAACTGACAAAAGTGAAATGTCAAGTAAAAATAATCCTCG
GAGAAGTACTGACAGTGTCACAAACAATAACTATAATAGGCAACCAACGA
ATCCAGCGCATTATGTAATAGCTAAAAAGAAAGGTAATAAAAAGACTCCA
ACACCACCACCAAGATCACCAGCTAGCCTCGGACTAACACCACAAACCAT
GTTTGATTTTCCACCAACGGAACCCAATAATGATATCACAGATGGCAAAG
ACAAAGTAAATAAGACTCAAGATTCAAGTACTAAAAGGAGGACTTATCAT
TCAGAAGGATCCGATGATGCGTTTGCCAGCTCTGAACCTTCACCACTACA
TTTTGATTATAGTAATATTGATTATTCAGATGAACCAGCATATGGTAATA
TCAGTCAAATAAGAAAGGACTCGTCAGATGACAGTTCTTCATCACAAATT
GTTAATGCACACAATGCAAGACGTTGGAAAGGAACTTCAAAACATTCTTC
AGATCCACTTTGTTATGATGAATGGAAGAAAGCCACTGGAGAAGGACAAG
CTCAAAGTCTACAAAATTTCGATGCGCTAGACAATCTAGATTATATTAAT
GTTAAAAACAATACAATTCAAAAGCAGGATTCACACCATGGTTCCTATGT
AAACGTTAGTACGTCAGAATCTGGGAAACCTGAAATTGGTGGCAATTTAA
GGAACAGAAGGAAACATAAGCCAGCACCTCTGAATTTAGGTAATAAGCAA
ACAAAAACTTATAagaatgaatttgaaaagtatgatgatgatgattcgAA
TATTTATCACCCCTTTGGTGGGTTGGATTCTGCAGATGGAAGTAGCAGTG
CATCTTCTATAATAAGTCGCAGACCAGGTGGCTCATATGAAAACATGGCT
GGCAAAAGTAGCACACCAAGCAGTAACCATAATAGTGATTACTTGAATTT
AATGTCACCAGCTAATGCCACTAAAAGTGGTGGGTCAATTAATTCTTCAA
AGCCATCTATGGACTACGCagttttgactggaaaaatgaCTTCTTATTCA
AAATCAGTATCGACTTCACCTATCAGGGGTTCAGCTAGATCTCCCATAGA
AAAACCTAACAAAAGTGATTACACTCTGATTGACGGTAAAGCAACCGATG
CACTGAATCGAGCAAGGGATACTAGAGATAAACAGCTAACAGGAAACAAA
ACACCGACAAAAACCTTGAAATGAGTTATACAGTCAATTGTATAATTCTC
CTCAATATTTTTAAGCAGATTATATTTGTTGgtctaatttttttattcag
aaAGTGTGGTTATTTTTAAGAAGGAATTATATTTTAATAGTTTAGATACT
ACAATTAAATTTACCTTAGATACATACTTGGTAATTAAGGATAGTTAATT
AACAACCCTCTTGCTCATGAATATTGATTTTATTTGATCAGACCTACTCG
ATTCTATTCTCTAGGGTCTTGTCTTGTGAAAcactttttcaatctttttg
gtAATTTGTAACAATGAATCATCCATTTTTCGTCAAAGATTGAGC
Run BLAST on NCBI

transcript from alignment at scaffold_404:158321..175350+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063860 ID=TCONS_00063860|Name=TCONS_00063860|organism=Clytia hemisphaerica|type=transcript|length=17030bp|location=Sequence derived from alignment at scaffold_404:158321..175350+ (Clytia hemisphaerica)
GCCTTAATGAGCTGATTTTATAGTGTAAGCTGTTTTTAACATGATAGGTG
CATTTTTTAAAGGGTAGTTGTTTGTGTAGACCTGCCACTGCGCCGACATT
AGAAAGTCAGGAGAGGAGAGAGCAGACCtcccaatagaccttttttcaaa
gaggccaccctgttgaataattatgtagtccagcatacatacagtaatta
tgcatggctctatcattgtttttatggctggactacataattattcaaca
ggacgtcctctttgaaaaaaggtctatgctcACAGTTTAGCTTTGAGGCT
AATGGTGGGAATCCTTTTTTACTATGTGCTGGGTTGGaaaacgaccctgc
ctatgccccggacagtccggggcaaatgtctggggtctgaaaaaaataac
tttttccccggacctacgtccggggctccaatttttgcgccataaattta
ccccggacgtatatcgccgagcacactttttttataaactaggcaaggtt
aataaattaattaaaaataaaaaaattaactttacttacctttctctgtc
tgagcaggatccatttttcagctttcggttagattttagaatttgattgC
TAAACAAACCACGCTTGAGATTTATATAAGGTTCAAAAACAGGCCTCACA
CACGAAACGCCAAAATCAGgacattacaagatcttttggaagacggcgtt
tgtccacggaagaatatttcaatgaattagaaaaNatgaattagaaaaaa
gcccgcgcggtcagcgattctataaaaagcgaccgcgcgggctgtctggg
gcgtccggggtagtctctcaaaaacaaataatacggaccccgggcacgca
tcaaaaaaaccccggactgtccggggcataggcagggtcgtgtTGGAAAA
CAAGACACCATCTGACCATCCCATCCGGCATGCATACCCTGAAGCTGAAG
TGAAGTCGCGGGTAATTTACATCAGTGAcaacccacggcatggcccgaac
atgttcgggcctcttgattaatactttttaaaaatggcctgcgcgggccc
gcgcagtttcggaccatgttcaggccagattttcgaaaacttgctacgat
cgcgcgtgtaattCCAGTCTGGAAAGGAGGGAAATCTTGCGCTAGAGCTG
CGCCAACTTAACTGGGAAAAGTTGAGGGCAGCAGATCTCAAACCTCAAAT
CTACGCCGGAGATATCTGGCGCACAAGCCGCAATTTCCAGACTgggtgta
atttcaggacccaatatagtcccgctgctgagatcgaaaaaagtggctag
aaaacgattttcgtgacacacatcttagaactaactttttttggtggaaa
ctcacgaATTAGTTTATGTAGATtcataaatcaaaaagtttccgcgatat
tatcgtgcaagtaacgagtaattggcgattttttgcgtttccaggcaaaa
ttgcaaggcctggaaattcatgatttttggggNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNGgtggtcttcaaattaaaaaaagacc
tatatcacatgatagagctcttcaaactgagcaaaaaagtgtattacacc
aaagtcccaacttctctagatccatcctcagaaccatcattttcaaagaa
ataaaaaggttatttttctgttaaaattttcattttggacctcaacttgg
catcagagtatttgttttctatttctaaNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGACTTTCAA
AATGCTCAAGAAGCTGATCTACAACCTAATTAAAAACACCCTAGAATAAA
TCAAACACTAATattaacaaaaatactgataaaATATTAAACAAAATACT
AAATAGAACTAACGTGAAACACTATAACAGCGTTTTCTCCAAATCTAGAG
TACTTACGAATTACAAATTTTCATATTCTATTACAGTATCCTGAAACGTT
GCATCCGCATATCTTTAACTTGTCAGATTTAAAGATTGGTTATCTGAAAA
TACATTTCTGCAATTtagttcaaatataaaagttaatcatctattttcca
attaaagttaggaaaattattaaaaagaatgatttgaatcttacataata
tggtcttctttttattctttatcccgttcccttttctcgtggtcttctcc
tattcgaagaagaatttttctggatcgttttttgtactgttatacaactt
tgtgaatcaaactggtatttggaactttgaatttgtctaatcaTGGTCCA
TCACAAACAGCCATTTaaacaaaagttgtctttttgatttcccaaacatc
cgtctaaagcgttcacttccacaataatttatgtaattgcaatttcggtc
agtccacagtcggcttcaacatatgcacgtgtttttatttacgtgaccgN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNcgggggtaagtggcgaagcaacacagcagattattcgtaaagtaaa
gaaatatcttttggcattgacaatcaaatataatatattatattatattt
ccttaatttaaaaatcaaaaattaatttttcattcgcgaaagaaaaaaaa
aaatgaattaatattacatactaagacgcccccgtcttttactctcgttt
aatttccgatctcgtaacgtgcaaaacgcctgtccgcccaatatccaccc
aatcagcttaaattcactttaattgttctttgactttcaaaaaatagtaa
ttaaaaattatgaatttataataattacaaaaaacaaaaagtttgatact
tcattagtgaaatattcaataaattcctagtttcaattttcagtgggcgt
ttttctagggcttcgtttatcgcgcaatttttgcgtcacacaaactttct
cggccgctcgttataattatgcattgtcaaatttggttctctattgtcaa
gtcaggatcgatggtgacgtcacctaagcataaaaaagaaaggattttgt
AAGTTTTATGCAtgtattaatttgcgagatattctatttgctgcgcgagc
gcacttttcgtagactagtcggaatactttcttttactcgcgggattgat
ggtaacttttcatcttcgttatttttaaaatgaagcacaaccNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNaaacgagacaaaactccaaaaaa
gctggtgttttgaagcgcttccgtgcgatcgaaatatcgctgtttgtgac
gcactgctaatgaaaatacagtatttaacaatggatgatgataaaccagg
aaaggtaaatacatggtccgaacaaaatgttcgggccgattcaataatac
ttttttgttgcccgagcatggtccgaacaggcccgaacatgcTCGGGCCA
TGCCATGGGTTGTCATCAGtgcagtggagggaaacttgcatagccatcaa
atgactgaccaatcaaagcagcaaaatttgaaaacaaacgaACAACACGG
CTCCACTTGCAGCTCTCttttaccatttttgttttgattttactttgtat
tttaatgaccagacaggtcattcatttgagggctatgcatgtttgcctcc
actgtgcactgatgcaagttacccgatctcacggtacttCATACTACCAT
TTTAAAGTAGTACTGTAGGTCTAAACAAAGTCAACATCCCATCCCTcatc
aaattcaaaatctatTATGCCCTTGGTGTTGGCGGTTGGTAGCGCTCCAC
CTTTTGATTGCAGGATTGTGTGAATAATTAGCGACTCATACTAGTAAATT
TTGGTTATAAAGAAGTCCATTCGTATTGATATTATATAAGGCAGTCatag
aaaaattgttctattcgtgtcacccgcccgcatcatattttccgctgatt
ttccggtgcggtgCGGTGTTCTTTTAAATtgtaccatcaactgctctaac
ttaggacgattggtcgaaacatgggactggtcgatatttggtctgtattt
tcacttactatcagttagtcacactaggaaatctagctttcagaaaaaac
aacatcagtcatctacaggatgtatttgcacaacaaggatgagagttacc
tgaatcaagtNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaattaaaact
tgaaagtttgaaacaaaataaaacgtgcagcagccaaaatcaaccagcca
aaatttgtcattcaattcccgagacagcgcttcgatttttaaggccttgt
ttatacgctatagtaaaaataattccgcacatgtaaatgggtcattgttt
caggtccggcaaaatttccgggaaacagcctatccggtggtgcgcggatc
taggtgggttccgcctcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttcaaatta
gttttcaaggttggcttggctcaaattttttcatctatggctcaaatttt
aggcaatttctcaaagtttttgaaaatgttaatttcattaaaaatcgccg
ggttattttttcatgaatccattccctttagaagttttgcggcgcatttt
tttgcttgagagtcaagtaaacgatatagcgctttcgcagcattaatctt
tgatacgcattttggcgggacgctagtgtgactaactgactgttaaatct
ctttgacaacaaatttgttttgataactccaccaagtttatcaatcatac
tttttctatttgcaccaacattgagtttgttcatacccacattgatattg
ttaatcaaaGTGAAAGTTAAAAAGATGCGATGAAGTCGcaacattttgaa
gaaaaaagcagcgcgctggccaatgaaaaaagagtttttttctcaaagct
AATTCAAAACTGTACTTATAAAGTTGCGAATTTGTGTGTATAGGTGAAAG
CCAGTGAAGTTGCatgctttcagtggagtttgtggacaaaataagaaaaa
aattgggTGAAAAGATTTTTGTCCCAATACTTGTTTTTATATCGGTATGT
AGTTGGACCCCATCCCCTTATCAACCCAACgctgataaaaaattcgaaag
ttttttgtcgcgGATCCCTAACAGGGCATtcttactcatggccacacctg
atgctAGATTTATGTTCTTCATCTATCTGCactccatttatttctcaact
ttctttatgTTCACTTACCGGTGTTACTTACTTAGTATACTTGGAAGTAG
TTCAACGCTCTGTGGCATCCACTCATCTTGTTGAGACCAGTGCCTCTATg
ctattttatttttgttggttGTCAATTGTGGATTTGtctatttctttgtt
ttggttttttggttttttaattaatttgtcatttttgttgatttttagtt
ttgttGATGTGTTGATTTGTTGGTTTGCCACTTTGTCCTTGTTGCTTTGA
GTTGGTGATATGATTTCTTTTCTGGTTAAATTAGCGGGACATtgacaggc
tagctctaaagctctaaaatagcatctaataacatgaaaaccagaatatg
attcttcaatatGGGAGTCataactataaagtgcactcacaaacatcaat
ttgtcagatctaacaaaattaataatggcactgtcatcattgacaatcaa
acaaattatcttctgtcaagaaccttgtaaacattccaacaacttcaaTT
GAAATGATCTGCCACAGCTAAGTTCTACCATTTTGTGCATGGTTTGAGAG
AACGCCTGCGAGCTACCGCACGAATGGAagactttaatctgtcaatcatc
ttctcaagcgaagagtacgcatatttttactgctctattcacatactgaa
tttgaaagatccttctatgtggcgtttttttgcaacctttgaaaactgat
ttttgtccagCTTCTGCAGGACTTTAGTCTAAGAGCTTGCGTGCAGCATT
GGGTAcaaaagtccaaatatgtgtttcccgtaaattttatatgaacagTT
CAGGACTATACTGATTGAGGGTCAAACTGGTCACagactttgaaaaatca
aactggATTGATTTATCCaagacttaaactcctatatcaggattagaaaa
tAGGCTAATctcctcttttatctttccctttgcagcaatacaatgctgac
aagttNATAGGCTAATCTCCTCTTTTATTTTTCCCTTTGCagcaatacaa
tgctgacaagttgacacaacataTTGCagcattgacaagtaatccctgtg
aGAAGTTTATAATATGgaaatttgcaacaaaaacgaaagtggtctctttt
ACAGATTGCTTCTCAGCGCTCCTTCACAGACtgttatcaaatttccacca
atgcaTTTCACActgcccttctttttggcacctttcatatatttgtttca
attcgTAATCCCAAGGCTTAGGCTTTTTCTCTTCTTCCATTTTCGGAAGA
Aaatgggaatttgatgcgagagtgttatgttagattgtcaacaaagtgtc
gtaaaaaatcattgaataaagaagaactttattaaatcttaaaaatattt
tcattttgaagaattgctgaaaaaaaagtgaaacatggaaaagtttcatt
atTGGTTAAACCGAAATAGGGGATTgggaaaactttctatgtttggtCTT
Tcacacaaacccctgtaactatgggcaagcatcctgttgctaagatgttg
gcttgaaaccactgaaaatgaaaccactgacaatgaaagtaaaatcggcc
cgcaCTCCAAATCCTGTAGGAGTTTTGGTCTATACTGACAGGGACCTCat
tcataaaaactaaatttttgcATTTGAATAATTATTCTCTTGTTCTTTCT
TGTCCTAGTGTCTCTAGAAGAACACTTTGGACCAAAATTTTGCATACTTA
TAAACCCTTTAAAAATAGTACCTTATATATAGCAAAATTAGAGCACAGAa
ttgaaaagtttctaaaagacaaacacttctaattagcggacactagcTCT
ATTCCCCAATGGTTtccgctaattggaggttcCACTGTAGCTTAAATGTA
TTATGATTATATCATTTGTAACATACATGTACTTCTTATATAATGTTGAA
GAATATTACTTTATTATATTGTGTAATTTCTGTGTATTATATAGTGTGAG
AACTGGTCTGTGTTTATGCTGCAGAATGCAAAAGCAGGTGGCACGCACAT
ATTTTAGTTGTTGACTATCAAATTAGCTGTAAATATTAACTGTTTACCTG
TCACCTGCTGACAGGTCGGTACACTTCATCTTTTTAACAACGACAAAATT
GTCTTTTCtaaatataccgggtgaccAAGAAAAAAGTATAAGGGTTTGAT
GGTTAACTGTCTCCAAAATACTGTGAACAgactaacttaaaatttggtat
aaaactttttaaacttgGTTCAGTGGTTCTCaagttaaaagtttttgaag
tcaaaatttctgatttttattaATTATCCTAACAAAAGTTATGGCAAGAA
ATAAGAAAGCAGTAATTCTGAACgacttttcaaaaagattttagtgaaaa
atgttaaaaatgcaaaatatgaTACCCAGTGATAGCCcttttttgacgtg
tttttggaatttttaaaaagtgtattttgacttcaaaagcttataacttg
agaaCCACCGTACCAATTTGAAAATGTCTTTCCCATCCCATAGACAATTA
GAATAGAATATAgtaaaaattcacattttttGGACAccattcaggggggg
gggtcggtagtaaaatctcagacataatgacgtttactacggtggtggtg
tgacgaaaaatcgaaaaaagattgtactacccagggtagttaaatactaa
aatctatgtgttaaatgttgaaaaaaatttactagcggggtagttaaaac
tggtaaaattagcaaattttagctattttcgtaattcttttaattttttg
gatgacttttctgaaaaaatctgaaaatttttataatttgaaaaaatttt
ctgttggaaaattgtttgctgcaaacgaaaaattcttgaagttttttgtc
aatataaaaaagactttaattctaagggcaaaacattaatttttgcacta
agtgaaaaatgtgtcacagaaataataattttttagctttttttNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NcccccccccccccccctgcaccATTTACCAAGAAACCTTTTTTTtctgg
gtcacccggtattgaaaaatgtaagatgaaagttaaattttttttcaaat
tttcatgatattaCACTTTTCCTAAAACCATGCTGAAAAAAGTGTTCAAT
ATATAGGTCCACTTTTCCCCTGAAGCACTTAGATAGTTAATGGGACGAAA
GTGCTTCCCTATTGACTCTTCCCtatttgattttgatgttttgttttttc
aggCTTGATAAATAAAACTGTGAAATGGTAGTACTAGCCACTTtactttg
acatttttttgcataaaaggaATGCTTTCAAAAAGATGCAATCATATTCA
TggaattaattcaaaatttggtattaaATAGAGAAGGAAAAAAGGTAAGA
CAATCCAtatcatttttttgtaaaagaaaatcGAGTCTATATTGAAATCT
CCTTGAGAAGTATTGTTAGTAGTTACAACTAGAAAATTCACAAAgatttt
attgtattttgaaCGGGTTCACTTTCACATTATGGTTGTCTTTATTTCTA
GTGGAAACAACGATGGGCATGTTTAAAGCGGGCATCACCTAAAAACTCTC
AAGCTACAAATGAaggtttttttcttattttctcaCAAATTTTTATGtat
ataacattttttcaaatttcactcACCCGAAATTGAGCTGACAAAATCAT
TTGTTAGGAAAATTTTATGGAATGTAATTTCTAGGCTGATATCTTTTTTG
ATCCCAGGACTAACTTATTTGCTCACTGAGGAACTTTTAATTTGACGTCT
TACAACTGAAACCTAGAAAAAATTGCTTCTAATAGTTCAGACAATCAAGA
TTCATCAAGATGATAATATCTGACATTGGATTTTCCTTTTTATTAGAAGC
TAAAACTATTTTGGTTTCAACCTGCTATGTCATACTTTGTCaatataatt
tttctttgttaaaaattattcaaaatgtttttttctttcagataaTTTCC
TTTATGATTTGTACGTGTTTCTTTATAAAAGTGAAGAACATGCCCATGAA
GGGAAAAACGCAAAACTTGTCATCCCTCTGACTGACTTTTGCGGTGTAGA
GGCACGCAAAGACTACGACAAATCAAATAATGTTTTGGTTTTGATAACCA
CTTCACAAACCTCTTTCTTATCCTTTGATAATGCTCTGTTACGTGATCAA
TGGATGCGAGCATTAGAAGACCAATTTGGTAAAGGTTAGTAAAAAGtcag
tttttatttctttacaCAAGAAAAATAGACATCTTTTATACAACACATTT
CaaagaatgaagtatttaaggAGTTTAGGcctaggaaaattttctaggaC
TCAAAAACTGCAAAACAAAACCCCCTTGACCcctaaaatttgacaaaatt
tcagAGTCAACAATAAAACCCAAAATCACATACCTATCAAAAgttctcaa
aaaaaaatatagagGACTTTTTAAGTGGATATAGTTGATTTCTTAACCTT
TCACTAGAAAATTGATGTCAAAATTACGTTTTGACGTGATTTCCAGTCGA
TTTACTTGCCTTACGTTGAGAAATCGAATAGCTTCACTTAAAAGTCCTCT
ATATCGTTTTTTGAGAATTGATGGTTTTGGGTTttattgactttgaaatt
ttgtcaaattttaggGTTCAAGGGGTTTTGGCTCTGACGTCAGTTTTTGA
GTCCTAAAATTTTTCCTAGGCCTTAGCAAAAAAAACCCTCACGAAAAACT
CGTGAAAACTAAATACTGtacttcattttttgaaattgatcaGATTTGGT
TGCGTTGCATAAAAGATGTAACAGGTCCTAAGGGTTTGCCCCCTACTAAT
ATTGTTGTTGAACACCATTTAAAAAAGTGCAATCATCAGACGTACAAAAA
ATGATGATTGCCGTAAGGCATGAAACTTGAATTAATGTAATCTTTttggc
ttcaaaattttgaaataaatttatcaatcatATATATCATATCGTCATTT
TCTTGCTTTGCAGTTACTGCTTTCAACATAAACATACCAGAcaaacagaa
gaaaaagaatgCAGAATCAACAATAAGGATTTACAGAAACTTCTTTTCAA
TTAcaaataaaaatcttaaatgTATAAACAGATGGTATACCAAGGACATA
AAAAGCTTCTCTAGAGGGGAGGACTCGCAGTTCATGTTCGAAATCTGTCC
TGAACATAAGACTAAAGGACTCCTTGTAAATATTGTGACTCCAAATGCCA
ATGAACTTCTCGGAGCTTTTGAAGAAATCAAAGCTGACCAGGATGAGCCA
GGTATCACATTTTCCTAAAATATAACTCGGACTCCTGTCCCTGGACAACA
CTGACTCGTTTTCAATTCATTATTTACTACTTATAACATAAGGGGTATAA
GATTCGAGTTCTGTGACACGTTTTATTGAAatgattttaagccaaaaaat
tcttgtttgaaaaacatttgtttAGTTTTCTATGGATGAAAATATCATTA
AATCCATTTGTTTCTACTGTAAATTATGcattatcttttgattaaaaaaa
atcttaattgtTCTTCTAGTTTTGACTCAACGAGATTTCACAGGCTCATC
TGTCCTCATTGACCTTGAGCAAGCCAAAAGAGGAGGAGCTGATGGTAATT
TCATACGAAGAGCAATTTTGCGGGCCAGTGATCGATTACGGCGAAAACAC
AGAGACAGGACACGCAGTACGCCAATGACAAGAAAAAACTTCAGATCGCC
TAGAGCTGCTACAAATTCAATGAGTGACGAGGCAAAATATTGTAGTCTCG
ATAGAAGAAAAAGCCCTGACCTGGGTATACAAATAAACAATGAAAGTCGA
GATAAGACAATTAATCTAATTCGGAGTACATCATCTCCTTCAGGTAGTCC
AATAAAGAAAGCGTTCAGTAAACAAATAAGTGTTGACGAATCAGCACCCA
TTCTACAACCAAAAAAGAAATCACCAAGCTCCTCAAGTAGTTCACAACCT
GTCCATATAGAAGGGAAAGTAGATTCACGAAATACTAATGAAAGGACATT
ACTTAAACCAAGAAGTATGACGATAGGTGATATTCCTGTACCTAAGGAAC
TTGCATCAACATCTAAAGACCAAACAACCAAATCTGAGGAGAAAATACCG
TTAGGTCTAGAACCAAGAATGAAAGACAAACCAGAATATATTCTAACAGC
AGAAGAGGCTAAAAAATTTCGAATGACTATGTCTCCAACTGACAAAAGTG
AAATGTCAAGTAAAAATAATCCTCGGAGAAGTACTGACAGTGTCACAAAC
AATAACTATAATAGGCAACCAACGAATCCAGCGCATTATGTAATAGCTAA
AAAGAAAGGTAATAAAAAGACTCCAACACCACCACCAAGATCACCAGCTA
GCCTCGGACTAACACCACAAACCATGTTTGATTTTCCACCAACGGAACCC
AATAATGATATCACAGATGGCAAAGACAAAGTAAATAAGACTCAAGATTC
AAGTACTAAAAGGAGGACTTATCATTCAGAAGGATCCGATGATGCGTTTG
CCAGCTCTGAACCTTCACCACTACATTTTGATTATAGTAATATTGATTAT
TCAGATGAACCAGCATATGGTAATATCAGTCAAATAAGAAAGGACTCGTC
AGATGACAGTTCTTCATCACAAATTGTTAATGCACACAATGCAAGACGTT
GGAAAGGAACTTCAAAACATTCTTCAGATCCACTTTGTTATGATGAATGG
AAGAAAGCCACTGGAGAAGGACAAGCTCAAAGTCTACAAAATTTCGATGC
GCTAGACAATCTAGATTATATTAATGTTAAAAACAATACAATTCAAAAGC
AGGATTCACACCATGGTTCCTATGTAAACGTTAGTACGTCAGAATCTGGG
AAACCTGAAATTGGTGGCAATTTAAGGAACAGAAGGAAACATAAGCCAGC
ACCTCTAAATTTAGGTAATAAGCAAACAAAAACTTATAagaatgaatttg
aaaagtatgatgatgatgattcgAATATTTATCACCCCTTTGGGGGGTTG
GATTCTGCAGATGGAAGTAGCAGTGCATCTTCTATAATAAGTCGCAGACC
AGGTGGCTCATATGAAAACATGGCTGGCAAAAGTAGCACACCAAGCAGTA
ACCATAATAGTGATTACTTGAATTTAATGTCACCAGCTAATGCCACTAAA
AGTGGTGGGTCAATTAATTCTTCAAAGCCATCTATGGACTACGCagtttt
gactggaaaaatgaCTTCTTATTCAAAATCAGTATCGACTTCACCTATCA
GGGGTTCAGCTAGATCTCCCATAGAAAAACCTAACAAAAGTGATTACACT
CTGATTGACGGTAAAGCAACCGATGCACTGAATCGAGCAAGGGATACTAG
AGATAAACAGCTAACAGGAAACAAAACACCGACAAAAACCTTGAAATGAG
TTATACAGTCAATTGTATAATTCTCCTCAATATTTTTAAGCAGATTATAT
TTGTTGgtctaatttttttattcagaaAGTGTGGTTATTTTTAAGAAGGA
ATTATATTTTAATAGTTTAGATACTACNAATTTAAGGAACAGAAGGAAAC
ATAAGCCAGCACCTCTGAATTTAGGTAATAAGCAAACAAAAACTTATAag
aatgaatttgaaaagtatgatgatgatgattcgAATATTTATCACCCCTT
TGGTGGGTTGGATTCTGCAGATGGAAGTAGCAGTGCATCTTCTATAATAA
GTCGCAGACCAGGTGGCTCATATGAAAACATGGCTGGCAAAAGTAGCACA
CCAAGCAGTAACCATAATAGTGATTACTTGAATTTAATGTCACCAGCTAA
TGCCACTAAAAGTGGTGGGTCAATTAATTCTTCAAAGCCATCTATGGACT
ACGCagttttgactggaaaaatgaCTTCTTATTCAAAATCAGTATCGACT
TCACCTATCAGGGGTTCAGCTAGATCTCCCATAGAAAAACCTAACAAAAG
TGATTACACTCTGATTGACGGTAAAGCAACCGATGCACTGAATCGAGCAA
GGGATACTAGAGATAAACAGCTAACAGGAAACAAAACACCGACAAAAACC
TTGAAATGAGTTATACAGTCAATTGTATAATTCTCCTCAATATTTTTAAG
CAGATTATATTTGTTGgtctaatttttttattcagaaAGTGTGGTTATTT
TTAAGAAGGAATTATATTTTAATAGTTTAGATACTACAATTAAATTTACC
TTAGATACATACTTGGTAATTAAGGATAGTTAATTAACAACCCTCTTGCT
CATGAATATTGATTTTATTTGATCAGACCTACTCGATTCTATTCTCTAGG
GTCTTGTCTTGTGAAAcactttttcaatctttttggtAATTTGTAACAAT
GAATCATCCATTTTTCGTCAAAGATTGAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040042XLOC_040042Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063860-exon-scaffold_404-1491911889:158321..158344TCONS_00063860-exon-scaffold_404-1491911889:158321..158344Clytia hemisphaericaexon
TCONS_00063860-exon-scaffold_404-1510915933:158321..158344TCONS_00063860-exon-scaffold_404-1510915933:158321..158344Clytia hemisphaericaexon
TCONS_00063860-exon-scaffold_404-1575043694:158321..158344TCONS_00063860-exon-scaffold_404-1575043694:158321..158344Clytia hemisphaericaexon
TCONS_00063860-exon-scaffold_404-1491911889:170240..170314TCONS_00063860-exon-scaffold_404-1491911889:170240..170314Clytia hemisphaericaexon
TCONS_00063860-exon-scaffold_404-1510915933:170240..170314TCONS_00063860-exon-scaffold_404-1510915933:170240..170314Clytia hemisphaericaexon
TCONS_00063860-exon-scaffold_404-1575043694:170240..170314TCONS_00063860-exon-scaffold_404-1575043694:170240..170314Clytia hemisphaericaexon
TCONS_00063860-exon-scaffold_404-1491911889:170472..170535TCONS_00063860-exon-scaffold_404-1491911889:170472..170535Clytia hemisphaericaexon
TCONS_00063860-exon-scaffold_404-1510915933:170472..170535TCONS_00063860-exon-scaffold_404-1510915933:170472..170535Clytia hemisphaericaexon
TCONS_00063860-exon-scaffold_404-1575043694:170472..170535TCONS_00063860-exon-scaffold_404-1575043694:170472..170535Clytia hemisphaericaexon
TCONS_00063860-exon-scaffold_404-1491911889:170912..171154TCONS_00063860-exon-scaffold_404-1491911889:170912..171154Clytia hemisphaericaexon
TCONS_00063860-exon-scaffold_404-1510915933:170912..171154TCONS_00063860-exon-scaffold_404-1510915933:170912..171154Clytia hemisphaericaexon
TCONS_00063860-exon-scaffold_404-1575043694:170912..171154TCONS_00063860-exon-scaffold_404-1575043694:170912..171154Clytia hemisphaericaexon
TCONS_00063860-exon-scaffold_404-1491911889:171934..172221TCONS_00063860-exon-scaffold_404-1491911889:171934..172221Clytia hemisphaericaexon
TCONS_00063860-exon-scaffold_404-1510915933:171934..172221TCONS_00063860-exon-scaffold_404-1510915933:171934..172221Clytia hemisphaericaexon
TCONS_00063860-exon-scaffold_404-1575043694:171934..172221TCONS_00063860-exon-scaffold_404-1575043694:171934..172221Clytia hemisphaericaexon
TCONS_00063860-exon-scaffold_404-1491911889:172490..173860TCONS_00063860-exon-scaffold_404-1491911889:172490..173860Clytia hemisphaericaexon
TCONS_00063860-exon-scaffold_404-1510915933:172490..173860TCONS_00063860-exon-scaffold_404-1510915933:172490..173860Clytia hemisphaericaexon
TCONS_00063860-exon-scaffold_404-1575043694:172490..173860TCONS_00063860-exon-scaffold_404-1575043694:172490..173860Clytia hemisphaericaexon
TCONS_00063860-exon-scaffold_404-1491911889:174521..175350TCONS_00063860-exon-scaffold_404-1491911889:174521..175350Clytia hemisphaericaexon
TCONS_00063860-exon-scaffold_404-1510915933:174521..175350TCONS_00063860-exon-scaffold_404-1510915933:174521..175350Clytia hemisphaericaexon
TCONS_00063860-exon-scaffold_404-1575043694:174521..175350TCONS_00063860-exon-scaffold_404-1575043694:174521..175350Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_404supercontigscaffold_404:158321..175350 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.09239	5.1334	1.61718	0.493904	24.588	14.7712	15.3359	11.4091	8.20414	16.7057	3.88133	7.73496	6.20894	7.39561	6.89708	4.75382	11.2136	14.1939	9.91687	11.3607	8.08805	8.48254	6.35489	7.52116	10.4967	1.23626	15.3023	11.5494	9.37822	13.4344
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063860 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top