TCONS_00063944 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063944
Unique NameTCONS_00063944
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2470

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063944 ID=TCONS_00063944|Name=TCONS_00063944|organism=Clytia hemisphaerica|type=transcript|length=2470bp
TTTCTTCAAACTCTGTTCAGTATCCCTAAAATTCGCTCAATAatccataa
ttttcattatctgtataaaaaattccgaaaatatattttcatattttacc
cCCGACGCGCTAATGTTTACGTCGACATATGACGTAGTTTCAAAACACTT
CCCATAATGCTAAGTACACGTTCACAGAAGCAATCAAAATTGCGGAGGCT
CTTGTTCAAAACATAACATCAGAAGACGTTGTGAAGTAAAGAAAGAATCA
AGAAGAAGATTCTTTGACCGAATTTTGGATTTCTCCTTTGGGAtactgat
ttgattttgtttggcTTGGAACTAATTTAACATGGGCTtcaaatttctTG
AAGTTCTAAAACCATTCATATCGGTTTTACCCGAAGTTTCAAAGCCAGAA
AGAAAGATTCAATTCAGAGAGAAGGTATTATGGACAGCCATCACTCTCTT
TATCTTCTTGGTTTGTTGCCAGATTCCCTTGTTTGGAATTATGTCTTCAG
ATTCTGCTGATCCTTTCTACTGGCTCCGTGTTATTATGGCATCCAATAGA
GGAACTTTGATGGAACTTGGTATTTCACCCATTGTTACATCGGGCTTGAT
CATGCAACTTTTGGCTGGTGCCAAAATTCTTGAAGTTGGTGACACTCCAC
GTGACCGTGCTTTATTCAATGGTGCCCAAAAATTGTTTGGAATGATCATT
ACAATCGGTCAAGCTATTGTTTACGTTATGACTGGAATGTATGGTGAACC
ATCTGATCTTGGAGCTGGTGTTTGTCTTTTGATTATCATTCAATTATTCT
GTGCTGGTCTCATTGTCTTGCTTCTTGATGAATTATTGCAAAAAGGATAT
GGTTTAGGATCTGGTATTTCTCTCTTCATTGCTACCAACATTTGTGAAAC
AATTGTCTGGAAAGCATTCAGTCCAGCCACTGTCAACACCGGAAGAGGTA
CTGAATTTGAAGGAGCTGTCATTGCTTTGTTCCATCTTCTTGCAACCAGA
ACTGACAAAGTCAGAGGTCTTCGTGAAGCTTTCTACAGACAAAACCTTCC
AAACTTGATGAACTTACTTGCCACAATCTTTGTCTTTGCTATTGTTATAT
ACTTCCAGGGATTCCGTGTAGATTTACCAATCAAATCAGCAAGATACAGA
GGACAATATAGTTCATATCCAATTAAACTGTTTTACACATCAAACATTCC
AATCATTTTACAGAGTGCATTGGTATCAAACGTATACATCATCTCACAAA
TGTTATCATCCAAATTCGCTGGTAACTTCTTTGTAAGCCTTCTTGGTGTA
TGGAATGAGGCTGGTGGCGCGTCCAGATCATACCCAATTGGTGGATTATG
TTACTACTTGTCTCCACCAGAATCATTGGGAAATATCGTGGAAGATCCAA
TCCACGCTTTCATGTACATCTTTTTCATGCTTGGATCATGTGCTTTCTTC
TCCAAGACATGGATTGATGTCTCTGGCTCATCTGCCAAAGATGTTGCCAA
GCAATTGAAAGACCAACAAATGGTCATGAGAGGTCACCGTGAAAAATCTA
TGATTCACGAGTTGAACAGatACATTCCAACAGCTGCTGCTTTTGGTGGT
CTTTGCATTGGAGCTTTATCTGTTTTGGCCGACTTTATGGGAGCCATTGG
ATCTGGTACTGGTATCCTTCTTGCCGTCACAATTATTTATCAATACTTTG
AAATCTTCGTGAAAGAACAGAGCGAACAAGGTGGTATGGGTACATTGCTT
TTCTAAACCTAACCGTAGAAATTTGATGGTACCGTCATCACTTATAGCAA
TTATTTCAACTAAAGCACGTTATTTAgaaacatttttggaaattttaaat
attattgaaaaaacttatttttgtgTACTTTGAAACGAATGGAATTACCG
TACCTACACGACGAATACATCATCCCTTGTGAATATTGATAAATTTGGAT
TGTGTAATTTACATAATTTTCTAACTTAGTTTATTATTTTTGCCTGTTCT
ATCcaagttcattttttaaaaatggaaGATTTGTCTCTTTAGAAAGAATT
GATATCGTTGACCGACTTTTTACtttgacatttttaggctttttgctttt
ttgatattttccacCACCAGTCAGTGTTTCGAAAAACtagatttttaaag
atttttttacagttttaggggacaaatttcttttatttgaatttaaagGT
GCCCACTTGTAAAATAATTTGTCATTCTGTGTTGTTCTGAAAATGACATT
TAATTTATCATTTATGGAAGAAGAAAAACCAAATGAAACTTTTTCTGCAT
TTTCAGGTTATCCTATCTTAAGCCCACCCTTCCCCTCCTAATGAAATTCA
ACTAAACAAGCCATCccattggctaaaagcaaaaacataaacaaaaaaat
gtccagAGTAAGAGCACAGAAAGCACATTTTTCTCATACTCTgtaggtcc
tttaaattaacccaagTCCG
Run BLAST on NCBI

transcript from alignment at scaffold_404:554250..560495-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063944 ID=TCONS_00063944|Name=TCONS_00063944|organism=Clytia hemisphaerica|type=transcript|length=6246bp|location=Sequence derived from alignment at scaffold_404:554250..560495- (Clytia hemisphaerica)
TTTCTTCAAACTCTGTTCAGTATCCCTAAAATTCGCTCAATAATCCATAA
TTTTCATTATCTGTATAAAAAATTCCGAAAATATATTTTCATATTTTACC
CCCGACGCGCTAATGTTTACGTCGACATATGACGTAGTTTCAAAACACTT
CCCATAATGCTAAGTACACGTTCACAGAAGCAATCAAAATTGCGGAGGCT
CTTGTTCAAAACATAACATCAGAAGACGTTGTGAAGTAAAGAAAGAATCA
AGAAGAAGATTCTTTGACCGAATTTTGGATTTCTCCTTTGGGATACTGAT
TTGATTTTGTTTGGCTTGGAACTAATTTAACATGGGCTGTAAGTTTTCAC
ATTTATATTGTCTGACTATCCTTCAAAAGGGTACATGAATCACTGATTAT
TTTTGAATGAAAATATTGTATTTTTTTTGTGATAAATATTTTTTGTAATG
TTGACATAGAAAGCTAACTTTATATCATTTTTATTTTTAGTCAAATTTCT
TGAAGTTCTAAAACCATTCATATCGGTTTTACCCGAAGTTTCAAAGCCAG
AAAGAAAGGTTTGTTAATTTTTATCATTATGTTTATATTACCTTTCCCTT
ATAAAAATCCAGTCAGTAAAAAGGGTAATACGCGTGCCAGATAATTTTTG
GCGTAGCCTTGAATCAGGTCTTTGAGATTGCCAACTGTTGTGTATAAATT
TGTAGGGAAGGTAAACAAACGTATGTCTTTGTCTGTGAGTGAGGGATTAG
GCGTAAATCAATAATATGTTCCGTTTGCGTCATAAAACATTCACGTCAGT
GAATTTCAAGTTGATAATTTCAATGAGGGTGGACGGAAAAAAACTCAAAT
GGGGCTCAATGTGGGTAAAGTAAATAAAAACTTTGAATGAAGCGAATGGT
GATGTAGAAAAGGCCCAAGGGCTTAGCTATTGAAAAAATTTTCCAACATT
ATTGCGACTGGGCGGACTTGGGATTTATGTTTTGAAGGTAAGTTGGGCGA
CGCGAACAGAACATATTATTGATGGTCGCCTTAGGGAAAGTTAGGTTTTC
AACTGATAAACTTTTAAAGTTGATCTTTGTTTGAGAAAAAATTTCAGGAA
ATGATAATTTGAGATCTGCTATCAGGTTATTGCTAAGCTTTTCCAATGTC
AAAAGACTTTCAATGTCATTTTCAAATCTCAAAGTGGATAAAAAAAGTTA
AAGCTCGACGTTGCAGATAAATAGACTGAGGTTGTTTTCAAAGAAGTCTA
CTTTTTGTTGGTAACTTGTATGTGGACAATTTCATTTATATACAATTGCT
TTTCAGAATAGGATGTAAGCAAGTTTTTATCTCCAAATTACCTGAAAATG
AAAAAGCTGGTTATCTCTTTAAGTTCTAAAGGGACAAAATTTTCTTGAAA
GCAACTTTTTAACAAATACTGTAAGTTGGTCTAATGTCGACATCCCTCTT
CTTATTTTGTCACCTTTTTTTAGCGATAGGAATAATAGGAAGGTCGGAAT
CACTGATTGAAATAATTTTCTTTGCTTAGCAATCAGTCAACCTTCCTATT
ACTCCCATCTCTAAAGAGGGATGTCGAAATTAGAAGAGGGATGTTGACAT
TAAACCAACTTACGGTAATTTTGCTGGATAATTTAGGTTAACATCAAATT
TTGCAAGTTTTTACCATTCTATCAAATTTACCCAAATTGTACCTAAGAAA
GCTCACATTACCTTAATTCCTGTGAATTTTGTGTTCCTTTTCTTATTTTG
CACCCTCAATACACCCTTCACAATTTTGTAACTTTTGCTACCTTGCACCA
TTTGAGGGTCAAGCATAAAGGTTGTTTATTGGAAATTTGGTTGCATGATT
TTAAAGCTCTAAAACCATTACGTTTTTCTTTTGCTTTAACAGATTCAATT
CAGAGAGAAGGTATTATGGACAGCCATCACTCTCTTTATCTTCTTGGTTT
GTTGCCAGGTATATTTTTAGCTTACTTAATTTTTATTTAAACTGTTTTGT
CATCCAACTTAAAAACATTGAATTTTAGTCCAACTGAAGGTTACGTTGCA
CTAGGAATTCACTTCCTTGTGGGATAATTGCTAATTGATGATGTGTTATA
CATTTTAATTATACATAACTAATTATTCAACCAATTTGATAACTGTGTTT
TTAATGAGCCAATGGTTATTTGGGGCAATGAATTAATGAAAGTTTATTTC
TTCTAGATTCCCTTGTTTGGAATTATGTCTTCAGATTCTGCTGATCCTTT
CTACTGGCTCCGTGTTATTATGGCATCCAATAGAGGAACTTTGATGGAAC
TTGGTATTTCACCCATTGTTACATCGGGCTTGATCATGCAACTTTTGGCT
GGTGCCAAAATTCTTGAAGTTGGTGACACTCCACGTGACCGTGCTTTATT
CAATGGTGCCCAAAAATTGTTTGGAATGATCATTACAATCGGTCAAGCTA
TTGTTTACGTTATGACTGGAATGTATGGTGAACCATCTGATCTTGGAGCT
GGTGTTTGTCTTTTGATTATCATTCAATTATTCTGTGCTGGTCTCATTGT
CTTGCTTCTTGATGAATTATTGCAAAAAGGATATGGTTTAGGATCTGGTA
TTTCTCTCTTCATTGCTACCAACATTTGTGAAACAATTGTCTGGAAAGCA
TTCAGTCCAGCCACTGTCAACACCGGAAGAGGTAATTTTGATATTTGAAA
CTCATATTATTTGTATTTTAACTTTTGAGAAATTGATTGGTATAAAAGCT
AGCTGACAAACCATCTGTTTTAATTGGTCCAACCCTAATTCTCAAAAGCT
AAGTCAGCATCTGCTAGAGACCACAAGGGGACTTTTTAGCTTATTCTTCA
CAAAATTTACTACTATGTTAAAATGCACTACATGTTTTGGTCTTTGTAGG
TACTGAATTTGAAGGAGCTGTCATTGCTTTGTTCCATCTTCTTGCAACCA
GAACTGACAAAGTCAGAGGTCTTCGTGAAGCTTTCTACAGACAAAACCTT
CCAAACTTGATGAACTTACTTGCCACAATCTTTGTCTTTGCTATTGTTAT
ATACTTCCAGGTAAGGAAATCAAACATTCAGAAAGAAATGTAGTAGATAA
TTGTAAATATAAAATTACACTTCTAGTAAACCAAGAAGCTGGTGGAGATT
TCGCTGATATCTTTGTTCTTTACTGAACTTGGTTTTGTAAATCTTTAGGT
TTGAAGATTTTTCACGTCAATTTACCTTAACTTTTTAGGGATTCCGTGTA
GATTTACCAATCAAATCAGCAAGATACAGAGGACAATATAGTTCATATCC
AATTAAACTGTTTTACACATCAAACATTCCAATCATTTTACAGGTAAGAC
AGTCTTAAGTGCTTAATTGTCTATTGTAGCCTACATGTAGTAATATCGTT
GTTTTTTATTTCAAATTCTGATGTCACATGTCTTTTAACCAATGAAAATT
ATCTTAGAAAAAATTTACTTTATTTTTGACTTTTATTATATTTTTTGTGA
CATTCATCTGTAATTTTTTTCTTTTCATTTAAAGAGTGCATTGGTATCAA
ACGTATACATCATCTCACAAATGTTATCATCCAAATTTGCTGGTAACTTC
TTTGTAAGCCTTCTTGGTGTATGGAATGAGGCTGGTGGCGCGTCCAGATC
ATACCCAATTGGTGGATTATGTTACTACTTGTCTCCACCAGAATCATTGG
GAAATATCGTGGAAGATCCAATCCACGCTTTCATGTACATCTTTTTCATG
CTTGGATCATGTGCTTTCTTCTCCAAGACATGGATTGATGTCTCTGGCTC
ATCTGCCAAAGATGTTGCTAAGCAATTGAAAGACCAACAAATGGTCATGA
GAGGTCACCGTGAAAAATCTATGATTCACGAGTTGAACAGGTTAGCTTTT
TACATTTAAAACCCATACTAGTACAGGCAATAGCATGATATTAAATGAAG
CTCTTTAGAAAACTACATTTCTATGCAAGTTTGTTTAATGCTCTTCTTTA
TAAAATCGAAGTTTCAAAAACTCCTTATATCTCACCTATTTCTTTCCTCT
CAACACTATTTACTATTTTGTTTTGTTTTTTAGATACATTCCAACAGCTG
CTGCTTTTGGTGGTCTTTGCATTGGAGCTTTATCTGTTTTGGCCGACTTT
ATGGGAGCCATTGGATCTGGTACTGGTATCCTTCTTGCTGTCACAATTAT
TTATCAATACTTTGAAATCTTCGTGAAAGAACAGAGCGAACAAGGTGGTA
TGGGTACATTGCTTTTCTAAACCTAACCGTAGAAATTTGATGGTACCGTC
ATCACTTATAGCAATTATTTCAACTAAAGCACGTTATTTAGAAACATTTT
TGGAAATTTTAAATATTATTGAAAAAACTTATTTTTGTGTACTTTGAAAC
GAATGGAATTACCGTACCTACACGACGAATACATCATCCCTTGTGAATAT
TGATAAATTTGGATTGTGTAATTTACATAATTTTCTAACTTAGTTTATTA
TTTTTGCCTGTTCTATCCAAGTTCATTTTTTAAAAATGGAAGATTTGTCN
TAGTTCATATCCAATTAAACTGTTTTACACATCAAACATTCCAATCATTT
TACAGGTAAGACAGTCTTAAGTGCTTAATTGTCTATTGTAGCCTACATGT
AGTAATATCGTTGTTTTTTATTTCAAATTCTGATGTCACATGTCTTTTAA
CCAATGAAAATTATCTTAGAAAAAATTTACTTTATTTTTGACTTTTATTA
TATTTTTTGTGACATTCATCTGTAATTTTTTTCTTTTCATTTAAAGAGTG
CATTGGTATCAAACGTATACATCATCTCACAAATGTTATCATCCAAATTC
GCTGGTAACTTCTTTGTAAGCCTTCTTGGTGTATGGAATGAGGCTGGTGG
CGCGTCCAGATCATACCCAATTGGTGGATTATGTTACTACTTGTCTCCAC
CAGAATCATTGGGAAATATCGTGGAAGATCCAATCCACGCTTTCATGTAC
ATCTTTTTCATGCTTGGATCATGTGCTTTCTTCTCCAAGACATGGATTGA
TGTCTCTGGCTCATCTGCCAAAGATGTTGCCAAGCAATTGAAAGACCAAC
AAATGGTCATGAGAGGTCACCGTGAAAAATCTATGATTCACGAGTTGAAC
AGGTTAGCTTTTTACATTTAAAACCCATACTAGTACAGGCAATAGCATGA
TATTAAATGAAGCTCTTTAGAAAACTACATTTCTATGCAAGTTTGTTTAA
TGCTCTTCTTTATAAAATCGAAGTTTCAAAAACTCCTTATATCTCACCTA
TTTCTTTCCTCTCAACACTATTTACTATTTTGTTTTGTTTTTTAGATACA
TTCCAACAGCTGCTGCTTTTGGTGGTCTTTGCATTGGAGCTTTATCTGTT
TTGGCCGACTTTATGGGAGCCATTGGATCTGGTACTGGTATCCTTCTTGC
CGTCACAATTATTTATCAATACTTTGAAATCTTCGTGAAAGAACAGAGCG
AACAAGGTGGTATGGGTACATTGCTTTTCTAAACCTAACCGTAGAAATTT
GATGGTACCGTCATCACTTATAGCAATTATTTCAACTAAAGCACGTTATT
TAGAAACATTTTTGGAAATTTTAAATATTATTGAAAAAACTTATTTTTGT
GTACTTTGAAACGAATGGAATTACCGTACCTACACGACGAATACATCATC
CCTTGTGAATATTGATAAATTTGGATTGTGTAATTTACATAATTTTCTAA
CTTAGTTTATTATTTTTGCCTGTTCTATCCAAGTTCATTTTTTAAAAATG
GAAGATTTGTCTCTTTAGAAAGAATTGATATCGTTGACCGACTTTTTACT
TTGACATTTTTAGGCTTTTTGCTTTTTTGATATTTTCCACCACCAGTCAG
TGTTTCGAAAAACTAGATTTTTAAAGATTTTTTTACAGTTTTAGGGGACA
AATTTCTTTTATTTGAATTTAAAGGTGCCCACTTGTAAAATAATTTGTCA
TTCTGTGTTGTTCTGAAAATGACATTTAATTTATCATTTATGGAAGAAGA
AAAACCAAATGAAACTTTTTCTGCATTTTCAGGTTATCCTATCTTAAGCC
CACCCTTCCCCTCCTAATGAAATTCAACTAAACAAGCCATCCCATTGGCT
AAAAGCAAAAACATAAACAAAAAAATGTCCAGAGTAAGAGCACAGAAAGC
ACATTTTTCTCATACTCTGTAGGTCCTTTAAATTAACCCAAGTCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040077XLOC_040077Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063944-exon-scaffold_404-1575043694:560158..560495TCONS_00063944-exon-scaffold_404-1575043694:560158..560495Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1575043694:559938..560005TCONS_00063944-exon-scaffold_404-1575043694:559938..560005Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1575043694:558538..558603TCONS_00063944-exon-scaffold_404-1575043694:558538..558603Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1575043694:557815..558289TCONS_00063944-exon-scaffold_404-1575043694:557815..558289Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1575043694:557436..557596TCONS_00063944-exon-scaffold_404-1575043694:557436..557596Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1575043694:557153..557257TCONS_00063944-exon-scaffold_404-1575043694:557153..557257Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1575043694:556938..556961TCONS_00063944-exon-scaffold_404-1575043694:556938..556961Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1575043694:555344..555675TCONS_00063944-exon-scaffold_404-1575043694:555344..555675Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1575043694:554250..555150TCONS_00063944-exon-scaffold_404-1575043694:554250..555150Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1510915933:560158..560495TCONS_00063944-exon-scaffold_404-1510915933:560158..560495Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1510915933:559938..560005TCONS_00063944-exon-scaffold_404-1510915933:559938..560005Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1510915933:558538..558603TCONS_00063944-exon-scaffold_404-1510915933:558538..558603Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1510915933:557815..558289TCONS_00063944-exon-scaffold_404-1510915933:557815..558289Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1510915933:557436..557596TCONS_00063944-exon-scaffold_404-1510915933:557436..557596Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1510915933:557153..557257TCONS_00063944-exon-scaffold_404-1510915933:557153..557257Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1510915933:556938..556961TCONS_00063944-exon-scaffold_404-1510915933:556938..556961Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1510915933:555344..555675TCONS_00063944-exon-scaffold_404-1510915933:555344..555675Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1510915933:554250..555150TCONS_00063944-exon-scaffold_404-1510915933:554250..555150Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1491911889:560158..560495TCONS_00063944-exon-scaffold_404-1491911889:560158..560495Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1491911889:559938..560005TCONS_00063944-exon-scaffold_404-1491911889:559938..560005Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1491911889:558538..558603TCONS_00063944-exon-scaffold_404-1491911889:558538..558603Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1491911889:557815..558289TCONS_00063944-exon-scaffold_404-1491911889:557815..558289Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1491911889:557436..557596TCONS_00063944-exon-scaffold_404-1491911889:557436..557596Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1491911889:557153..557257TCONS_00063944-exon-scaffold_404-1491911889:557153..557257Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1491911889:556938..556961TCONS_00063944-exon-scaffold_404-1491911889:556938..556961Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1491911889:555344..555675TCONS_00063944-exon-scaffold_404-1491911889:555344..555675Clytia hemisphaericaexon
TCONS_00063944-exon-scaffold_404-1491911889:554250..555150TCONS_00063944-exon-scaffold_404-1491911889:554250..555150Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_404supercontigscaffold_404:554250..560495 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.38967	3.62914	1.05931	0.512897	0	0	0.597296	1.67598	0.3916	0.972284	0	0	0.309244	0	0	0.566718	0.698617	1.07295	0	1.03516	0.900728	0	1.60121	0.483283	0	0	0	0	0	0
Blast
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BLAST of TCONS_00063944 vs. Swiss-Prot (Human)
Match: S61A2 (Protein transport protein Sec61 subunit alpha isoform 2 OS=Homo sapiens GN=SEC61A2 PE=2 SV=3)

HSP 1 Score: 854.358 bits (2206), Expect = 0.000e+0
Identity = 420/476 (88.24%), Postives = 453/476 (95.17%), Query Frame = 2 
Query:  332 MGFKFLEVLKPFISVLPEVSKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWLRVIMASNRGTLMELGISPIVTSGLIMQLLAGAKILEVGDTPRDRALFNGAQKLFGMIITIGQAIVYVMTGMYGEPSDLGAGVCLLIIIQLFCAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLATRTDKVRGLREAFYRQNLPNLMNLLATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNVYIISQMLSSKFAGNFFVSLLGVWNE--AGGASRSYPIGGLCYYLSPPESLGNIVEDPIHAFMYIFFMLGSCAFFSKTWIDVSGSSAKDVAKQLKDQQMVMRGHREKSMIHELNRYIPTAAAFGGLCIGALSVLADFMGAIGSGTGILLAVTIIYQYFEIFVKEQSEQGGMGTLLF 1753
            MG KFLEV+KPF +VLPE+ KPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYW+RVI+ASNRGTLMELGISPIVTSGLIMQLLAGAKI+EVGDTP+DRALFNGAQKLFGMIITIGQAIVYVMTGMYG+P+++GAG+CLLIIIQLF AGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSP T+NTGRGTEFEGAVIALFHLLATRTDKVR LREAFYRQNLPNLMNL+AT+FVFA+VIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSN+Y+ISQMLS +F+GNF V+LLG W +   GG +RSYP+GGLCYYLSPPES+G I EDP+H  +YI FMLGSCAFFSKTWI+VSGSSAKDVAKQLK+QQMVMRGHR+ SM+HELNRYIPTAAAFGGLCIGALSVLADF+GAIGSGTGILLAVTIIYQYFEIFVKEQ+E GGMG L F
Sbjct:    1 MGIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEVGGMGALFF 476
The following BLAST results are available for this feature:
BLAST of TCONS_00063944 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S61A20.000e+088.24Protein transport protein Sec61 subunit alpha isof... [more]
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