TCONS_00063950 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00063950
Unique Name	TCONS_00063950
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2073

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_404:597855..607205-
coding sequence from alignment at scaffold_404:597855..607205-

transcript sequence

>TCONS_00063950 ID=TCONS_00063950|Name=TCONS_00063950|organism=Clytia hemisphaerica|type=transcript|length=2073bp
CGTTAGTTGGTTGGTTGGCTGGCTGGTTAAGACTTTACTGTGGTGGTTCA
CATCACATCACATCACATCACATCACGAATAACAGTGAATATATCAATTG
CGTCATTTGATAGATGGACATTGATAAGAATGATAGAGAAGCAGTATAAT
TggttaaatgaaaagaaaactgaaaAGCATCAATACCAAGACCAAAGAAG
GAGACATTTACAAGAACTGAAAAACGAAACAGATTATCAGATTGAAGATT
ATTTGGGAATTGTTAAAGATTGCATTGATTTTTAGCAAGCGTAGATAGAC
aatcttttttgatttcttaaaCATGCGATATCCTTATTCGCTACTTAAAG
CGATATTCGGATTATTCATCATCACGTGTTGTTACGAGCAAAAGGCATTA
AGTTTTACATACCGTAGAACGGGCAACCAACATCAACTACTACCCGACTC
AACGGACGATACCCTGACAGCAAACTTAGACATTGACACAAGTGAAGACT
TATCGAGTACATCATTCATAAAGAAAATCGATTCCAATATTCAAGAACTC
GAAAAAGACACTTCAACAAAAGATCTAGATTTAAAAGCGATGGAAAACCT
CGATAAAACCGACGAATCAACGAATCAACGAAATACGCGACATAATACTG
GGAAAGATCAGAACACTCAAGGCATGAGCACTAAAAAGACACGCGTTAAT
AAAGCAGATCGTGTTGTACCGAGCACGGTTCACGCTATCTTAAATGCACC
AACGAACACAATGAGAGCTTACTTACGTTCGAAGACTGGACTCTATTTAA
GGATGGGACCCAATGGTGAATTGGGTGGcacaagaaaaatgaaagataaG
CATGTTATATTCGTCATTGAGAGGATGTCAAAAGACGCGGTCCGTCTGAA
AGGTGAAGCCGCCAATAAATACATCTGTATCAATAAGAGGAGAAAGCTAT
TCACAAGGgagaAACCAAATTCCAAATGTCTGCTAAGGAGCTACTTAGAG
GAAAATCATTACGAACTATTCTGGTCTTACATGTATTCTAAAAAGACTGA
TGGCGAGAACGGTTGGTTCTTAGCTTTAAAAAGGAACGGTAAAATCAGGA
AACCAGCTAATACAAAAATCGGAGACCGACAGACTATGTTTTTCGTGCAT
CGAGCAGATGATATTCCAAGCGGATCTTGATTTCCAATTGGTTCATTGAG
CAGAGTGAGGATTCGATGAGCTGTAATGATACGTTGCTATGAAACCAAGT
GCAAGTTGTTATTtgtcaaaaatgacgtcaatgAAGATCTGATTGGTAGA
AAATGATATCATTAAGTAATCCAAAATTGACTGCATATNCAGTGCAAGTT
GTTATTcgtcaaaaatgacgtcaatgAAGATCTGATTGGTAGAAAATGAT
ATCATTATGTAATAAATTGACTGAATATTGAATCTGGTCAAGAAACGGAA
GAATGTTATCCATAGCGAAAAAGCTAGAACGGATTGGTGTGACATGAAAT
ATTGTTCATGCCAAGAGTTAAAGTGGTTGTACCGACAATAAAAGCTAGAA
TGGAACGCTAGAAATTAATAGAATTCGCAATTGTGAATCTGTATAAATAT
CAATGTGCCTAAAACAGACAATGTAACAATTCAAACGGTGGACCAattct
agaaaaataaaaacgaaagtgtTTTTAAAAAGGAGAATTCCATGGCTAAA
TTTTCCCTGAAAAGTGAAAAGATATTCCTGAAAAATTATCGATTgtattt
ttttatcatatttttgtaGCTAATGGAAGcagaaaatttaacaaaataat
ttattttatcaAGGTTTATTACAAATATTTTCGACCCACTTTATTAGGGT
TTTATTTTATAACTTATTAACTTACATAATGAATTAAAattgtggtaaat
ctttttcaaattattttgaatgaaattaagttcttgattcaaatttttat
gGTCGAAAAATGGTAAGTAttattttttgtaaagttttaagagTTTTTTC
CCCGTCctttaaaaatgtaaatatgaaaaaatattttatgataAATTATG
TTTAAATATAAGTTATACGttgg

Run BLAST on NCBI

protein sequence of TCONS_00063950-protein

>TCONS_00063950-protein ID=TCONS_00063950-protein|Name=TCONS_00063950-protein|organism=Clytia hemisphaerica|type=polypeptide|length=285bp
MRYPYSLLKAIFGLFIITCCYEQKALSFTYRRTGNQHQLLPDSTDDTLTA
NLDIDTSEDLSSTSFIKKIDSNIQELEKDTSTKDLDLKAMENLDKTDEST
NQRNTRHNTGKDQNTQGMSTKKTRVNKADRVVPSTVHAILNAPTNTMRAY
LRSKTGLYLRMGPNGELGGTRKMKDKHVIFVIERMSKDAVRLKGEAANKY
ICINKRRKLFTREKPNSKCLLRSYLEENHYELFWSYMYSKKTDGENGWFL
ALKRNGKIRKPANTKIGDRQTMFFVHRADDIPSGS

Run BLAST on NCBI

transcript from alignment at scaffold_404:597855..607205-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00063950 ID=TCONS_00063950|Name=TCONS_00063950|organism=Clytia hemisphaerica|type=transcript|length=9351bp|location=Sequence derived from alignment at scaffold_404:597855..607205- (Clytia hemisphaerica)
CGTTAGTTGGTTGGTTGGCTGGCTGGTTAAGACTTTACTGTGGTGGTTCA
CATCACATCACATCACATCACATCACGAATAACAGTGAATATATCAATTG
CGTCATTTGATAGATGGACATTGATAAGAATGATAGAGAAGCAGTATAAT
TGGTTAAATGAAAAGAAAACTGAAAAGCATCAATACCAAGACCAAAGAAG
GAGACATTTACAAGAACTGAAAAACGAAACAGATTATCAGATTGAAGATT
ATTTGGGAATTGTTAAAGATTGCATTGATTTTTAGCAAGCGTAGATAGAC
AATCTTTTTTGATTTCTTAAACATGCGATATCCTTATTCGCTACTTAAAG
CGGTAAGTCCATTCAAAATATCAGACAGTAAAGTGTCCGGCATTATCAAT
TTGTTTTTTTATTGTTGGGTTCAAAACTAATGGCGAGCCATGGTTACATT
TTCAAGGTTGATACATTTCAGCAACAGGAATCGAGAATTGAAATAAAATA
ATTTTGATATTTATGCTGGTTAGCATTGCTTTGTTGGTTTAAAGTATTGG
GGTAACATTATAGCATCCTATAACGCTGGCGATTGTTTTCTTTAGGCGCT
TACGTAAACGGTCGGTAATGTCGACGGATGATACCTCAAGTAATACCTTA
CACGTGTCTAGACGACAAATAATGTTTAAGAATCTCCATTTATTACAGTA
AAATGTTTTTTAATGAATAATCGAATCTTAAATTTGTTTTGTGCAACAGA
CCTACAACACAAATCTTGTCAGAATTCCAGAGTGACCTGATTTCTATAGA
TACAAGAAAGAGAAAGTTTTCATTCTGATATTATTTTTGATCGCGTGAGA
AATCAAGACCTCAGGCGTAATTATTTCTTTTCATAGTTGCTCCGTATCTA
GAATACACAAATAAAGATGCCTGAAAGATATGGCACATCTAAATGTTGTG
CTTTATGAGAAATTAAATGAATACGGATCACTGACTGATTATGTGCTAAG
CGATTGCCTAACAGATAGGCAGTGATAGACGCGAAGAGACGTCGAAATTA
AAAAAAATCCTTATCCATCATTAAGTATTGAAATGAATACAAGAAAAAAA
GCCATTATTAAATGCTTTTGATAGATGGGCGCAATTAAGGTAACAAAATT
CTAAACAATACAATCCATTAAAAAACGTAAATGACATTAAGCATCTACTA
TCTCGTTGACCAACCAGACCGACCAACACAAAAAAATGTGTTGCTCAAGC
TAATAGCGAAAAACGCAACTCAATCAGATCACTTTGAACCGTCGCGTAGT
GAGGAGCTCTGTCATTTTTCTATCATTTTTGCAAAAAGAGATAAAAACGC
AACGGGACAAGTAGTAAAGCTTCAGGAAATATAAGACATTTTAGATTTTT
TGGGGGTTGTTTTTTCAATTTATCGATGTATTGAAAATGGTCAGCTTTGC
ACTTGCAGAATTAATGGCTGACTTGACATTGCTTTTGGTACCAAATCATG
AACGTTAATTGGCTGCTTAATGTGAGTGAATTTGTGAGTTCATGTATGGA
ACACACACAGGTACTGTCGGTAAACATGGATAGGAGATTTAGAGGGTGGT
CAAAGGTTTCCATGTGAAAAGTACTGTACAATCTGCTTTCCATTTCTACA
TATTACCGGCAGTGTGAAACTTTCCTCGAAACAACCCTTGATTAATTTTC
AATGTGTTTGCGAGACTTTTTAAAGGAGGAGCATATATATGTGTTATCAT
TTTGCCTTGTCTGTATTCCATATTTTTGCACAAGTCAGGCGAGCGACAAG
GCAAAATTTAACCGCAAATCAAAATGAGCGAATTTCATTCAGAAAATTTA
ATCAACTAATATGGGCCATTGGGTTGATTGTACATTCAATTGAAATGGAT
TAAAACGAAGCCTTCATCTTTTTTACATGATTGCAACGGAAAGAAAGAGA
GAAAAAGGCACAAGAAAGGATCAGGTCGGCTTGTTAGATTGTCGACAGTT
TAATCGAGCCTGTAGATTCCATTAACCAAAATGTCCTTAAGGGCGGACAG
ACTTTGTTATAAAAGATGAAGGTTAAAATGCGATCAGCTCGACTTAACTT
AATATGATGTTAAAATTCTTAAAGTTTTAAAACACTTTCATTCAACTAAA
TGATATCGGAAAGAAAAGTAAAAATTGAAAAAAGTTCATCAATAAAACAA
ATGGCGCTTGAAAAAATTCCCACTGATTAGTCGAGAAAAAAGAATTCTTC
CTTGATTTCTTAACCAGCCCCTTGCTTATAGCTTTAAATTAACTATTACT
CAGGTCCCTCCTCTTGGTTGATTGGCTTTTAAACTGTCTTAATTGAAAAT
GACCGTGTTTTCAATTGGTTCCAATAAATGTTCTTGAGAGCTTCCCCAGT
AAAATGGCGTTTGAATAAACTAATTTTGCATAACTAAAATTCTACTGATA
TCAATATACTGTTGGACTAATTTTTTATTTTATTTTTATTTTTCCGTTCT
TAGATATTCGGATTATTCATCATCACGTGTTGTTACGAGCAAAAGGCATT
AAGTTTTACATACCGTAGAACGGGCAACCAACATCAACTACTACCCGACT
CAACGGACGATACCCTGNCTTTTGGTACCAAATCATGAACGTTAATTGGC
TGCTTAATGTGAGTGAATTTGTGAGTTCATGTATGGAACACACACAGGTA
CTGTCGGTAAACATGGATAGGAGATTTAGAGGGTGGTCAAAGGTTTCCAT
GTGAAAAGTACTGTACAATCTGCTTTCCATTTCTACATATTACCGGCAGT
GTGAAACTTTCCTCGAAACAACCCTTGATTAATTTTCAATGTGTTTGCGA
GACTTTTTAAAGGAGGAGCATATATATGTGTTATCATTTTGCCTTGTCTG
TATTCCATATTTTTGCACAAGTCAGGCGAGCGACAAGGCAAAATTTAACC
GCAAATCAAAATGAGCGAATTTCATTCAGAAAATTTAATCAACTAATATG
GGCCATTGGGTTGATTGTACATTCAATTGAAATGGATTAAAACGAAGCCT
TCATCTTTTTTACATGATTGCAACGGAAAGAAAGAGAGAAAAAGGCACAA
GAAAGGATCAGGTCGGCTTGTTAGATTGTCGACAGTTTAATCGAGCCTGT
AGATTCCATTAACCAAAATGTCCTTAAGGGCGGACAGACTTTGTTATAAA
AGATGAAGGTTAAAATGCGATCAGCTCGACTTAACTTAATATGATGTTAA
AATTCTTAAAGTTTTATAACACTTTCATTCAACTAAATGATATCGGAAAG
AAAAGTAAAAATTGAAAAAAGTTCATCAATAAAACAAATGGCGCTTGAAA
AAATTGCCACTGATTAGTCGAGAAAAAAGAATTCTTCCTTGATTTCTTAA
CCAGCCCCTTGCTTATAGCTTTAAATTAACTATTACTCAGGTCCCTCCTC
TTGGTTGATTGGCTTTTAAACTGTCTTAATTGAAAATGACCGTGCTTTCA
ATTGGTTCCAATAAATGTTCTTGAGAGCTTCCCCAGTAAAATGGCGTTTG
AATAAACTAATTTTGCATAACTAAAATTCTACTGATATCAATATACTGTT
GGACTAATTTTTTATTTTATTTTTATTTTTCCGTTCTTAGATATTCGGAT
TATTCATCATCACGTGTTGTTACGAGCAAAAGGCATTAAGTTTTACATAC
CGTAGAACGGGCAACCAACATCAACTACTACCCGACTCAACGGACGATAC
CCTGACAGCAAACTTAGACATTGACACAAGTGAAGACTTATCGAGTACAT
CATTCATAAAGAAAATCGATTCCAATATTCAAGAACTCGAAAAAGACACT
TCAACAAAAGATCTAGATTTAAAAGCGATGGAAAACCTCGATAAAACCGA
CGAATCAACGAATCAACGAAATACGCGACATAATACTGGGAAAGATCAGA
ACACTCAAGGCATGAGCACTAAAAAGACACGCGTTAATAAAGCAGATCGT
GTTGTACCGAGCACGGTTCACGCTATCTTAAATGCACCAACGAACACAAT
GAGAGCTTACTTACGTTCGAAGACTGGACTCTATTTAAGGATGGGACCCA
ATGGTGAATTGGGTGGCACAAGAAAAATGAAAGATAAGCATGGTAAGAGA
AATTTCTTTTTGCTTTCAGAATTTCGAAATGGGAGTGGGCGCTTTCACTA
TGTCGTAGACATACAACTTCACTTCAGACAATTAAGTATACGATGCTCTT
TTTTCGACATATTGCTTAAAGAAAAACAATCGCATAACTTTACGTCATTT
GGTCAACCCATGGTCTAAAGTCAGACTATTGGTTTGCACTTGAGTAAAAG
TGGCCAAAATCGTATACGAATTCGAGACCTTATAGATTACGTGATAACCT
GAACACACATGGCAATTTTCCAATTTCTCATCCATTTTGCAGGGAATTAA
AAATCACAAGCTTTCTCAGCTATCCGTTAGCTCTTTTTATTGTAAAATAG
AATCGAAAATTCACATGGGCTAGTCGCTTTATTTGAAGTGCGAGACGCCT
GTTGCTAACTCTAAAAGCTTTAAACGTTGTATGCAAAGCAATGGGATTTT
TTTCTTCTCTCGTTTTGTACTTGTAAAAATACCTATACGTTATGCTATAA
ACAGGGTTTTAATCCTAATAATCTGTCAAGATCATTCTGCTTTACAAATT
TATGCTAAGAGCTCCCTTGTTTCGTCACCTTTTCTCTTTTATTATGGCTT
GTTTTTCGAAGCCTTGTCCTTGTCGTAATCGCGTTTAAATTGTTGTCGAT
GTTATTGACAGGCGGGCGGATTCAGAGCACAACATTCTCACACAATAAAA
CAAGGCGGAAGCCTCTTCTTGCTATCCTACTTTCCTGCTATGAACAAAAA
TAGATTGCTTTCCAGAAGGAAGAGAATTTAAGAAACTCGCTCAGTTCCAA
CTCAAAGTTTGGTTTCATTCCAACTAATACCATTAAAATACTCAATTATT
AGGTCTCAGATTACTAATTATATTTTTATCGACCAAAATTTCATTTGCAT
CTTAACCATTTTTACAAATGAAAAACAACAACAACAGCATTCTGGATTAC
AGCAGTCTGGGAACATTGGATTAAGATAAGTTCTCATCGAATCAAAACAA
GTGTATTCTTGTAAAAGGGTGTTAACCGCATAATTGAGAAAAGATATCAA
ATCAACAATTCTTTTTGCAATATTCATTAAATTGAATTTTAACGTCAAGC
TTTCCTGGTGCGCTCCCATGCTCTTCAACTTTAAGGGTCAATAGCTGTAT
TGAAGGACTAAGAATTTGACAGCATCAGCTGTTTTGTAGCCATGGTTACA
TATTTGGATCAAACAATTAGCGAAAGGAAATTTTTGCGGTGTCATAAACT
GAAAAAAATCAATTGAATCAAGTATGATAAATTTTATTCTACGCCAAATA
TGATAAACGAATTTACGCATCTAACTAGGTTGGGGTCAACACATGGCAAT
TATCAAAAGCAATAGGAGCACATTTCCAAGAGGAAGAAAATGAAAAAAAT
TGGCGAATGGACTTGCTAAATTGCGCTCTATTGACGCATTAGCGAAATTT
ATTTCTTGGCGAACGGCTCAATTTTTGTTTTTCTCGAAACTACGTGCATT
TTTTATCTTATCAGGACATTGTTTGTGAGTATCTTCTGAGTTTTTGATTA
CCTTTGCTATTTACTCTGATTAGGTACAGGCATTGATAACAAGATAGGAG
GGTAGTTAAATTAGCGCATTTCAGTGAGAAATATTGAGATTACAAACGTT
TCAACCAAAATAATGAGACATAAGAAACGAGGGGAGAAAATTACAACGCT
TATAAATGCAGAACAGTGTTTAAGCGAATCAACCAAAATTAATAGACGTC
AAAATCGCATTTTCTCGCTTTGATTCTCGCAGAGGCACGTTTCCGCATCA
AACTGCGGGCATAAAGCGTTTAACAAGCTAACTGTGTTTCTGACTGCGCA
AAATCTGCTTAAAAATCTATGCTAGTCGCGCGCACATCTTTTTATTTAAC
GAACCAAGGTCAAAGCTCTATATATTAAAACTTGCAATTGTTGAAATTCA
TTATGATAGAATCAAAAGGCGAGGGAGTTTGAAATGCGGAAATTGATCCA
TCGAGTCAATTCAAAATTGGAGCGAAAACGGAGATTAGTACACATAGGCA
TCAACAGAGGTCGAAAAAGCCGGGTTTTTTAATGCAAAAAAAGTGTGTCA
GTTTATGCAAGAGTACAAAAAGCTTTATCGTTACATAATATCAACTTTCG
GAATTGAAATATGAAGTAATAGGTTAAGGCGTTGCCTCTTCAAATTAGCG
AGAGATTCCTTCCTGGCATTTTAAAGCAAGCTGTGAGATAGCTGAGAAAA
TGAGAAATAGCATAGGAACAAAGCGAATTCTGTTTTACAACTGATAAAGT
GTATAAAAGTAAGAGAATGAATGAGCAAAAATTATTTATTAAAAAGTAAA
AATTGCAAAATCGCTACTAGGAATGAAAAGAAAAATGAACCATTTTAATT
ATCAGGGTTATTAGGATGCAGCCAATACTCCTGTGCTGTGCGGTAAACAT
CAAAAAGTTTTGCATTTCGAAATAATCAAACTGCAAAAAGTAGTGCATCA
TTAATCATTTTATGAACATGCTACCTAGGGTTTTCTCTTTTGTCAATGCA
TATTTCTATATAATGACATCCCAAAAATCTTTCTTGCCTTGACCAAAAAA
ACACATCAACATGTCAATAAATCAAAAATGGGAATATTGTAAAATACAAA
ATATTTATCAATTAGAATTAAAACTTCCAGCTAAGAAAGGAAAATTTGAC
ATACTTAATGACGAGTTTTAAGGCATAAGATCACACATTTAGAATTCAAA
TAAAAATAGTGAGTCCTATTATTGGATATTGTCAAAATTTCAGATCTGAC
ATCACCAATAAGCTTATCATTATCAGAAACTCAAAAAAATTCAAAATCTC
TCAACTTGAAAAGTCAGATCAAATCAGGAGATAATGACAGAAGACGTTTG
ATAAAAAAGTGATGAGTGGAAATGTCAGATATCTGTCCATTGAAAATGAC
CATTAGACTGTATATTTTGTCATTTTTGGAATTAATTCACAAATTTTATC
TAACACAAAAATCAGCATTTTTCCCAAAGACATTTTCAGCAGCGCAAGTT
TATTTATTTCAGTCAGTGATAATCATCAAAACTTAATTGTGTGACGGGTG
TTGACGTCAATAGAATTTGAATTTTGCGCAATATATAAATTCCCAAAAAG
ATTGTCCTCATTTCATGCTTATATCAGGAAAATCCCAAAACTTTACTTCA
ATTAGAGCTAAAAAGGACAAGAAAAAAATCTTTAGACATTGAAGAACAGA
TATACATAGTAGGCAAAGCTACCTGCCAGCACTGACAGTACACAAAAGGC
ACTGATTAAGTCCTAACAAGCAACTTTATTTTATTATTTATCGCACGTCT
CCTTTTGGGATTAATCTTGACGCACTACCAGTTTTTAAGATCTAGATCGA
TAATGTCGTCATTTTGAAGACGACAATATATGCGCTTTTCTGAATCAACA
AAAAACATGTTTCTAAGACTTTCTTCTTCCTGAGACAGATAAATAATATC
TTACTCATCTTTCTTCTTCAGTTATATTCGTCATTGAGAGGATGTCAAAA
GACGCGGTCCGTCTGAAAGGTGAAGCCGCCAATAAATACATCTGTATCAA
TAAGAGGAGAAAGCTATTCACAAGGGTAAGTCGAAGGAAACTCAATTCTT
TTTATTTCAAGATAGAAATGTGATGCAATTACCAAAAATTACATTACCAG
GGAAAGTTTCGATAGTAAAAAGAACAAACAAGGCGTTTACAGGTTTGGAA
ATACCGAAAAAACGTAATGAAAAAATTACCGCGTCATTATTTTGTAAGTT
TCAAACAACAAGTATGGATTAGACATTTTCCAAAAATTAAAATGTGACTG
GATTATACTAATGATTCAGAATTGCCAAGTAATATTAATGACAATAATTT
CATTATAAAATACTCATTGAATATGAAAAGTCTTAATTCGATGAGACCTC
ATCATAAACAACAAAATTCGATTAAAATGTATTTTTTTGGTTTGGCTGAC
TAGGTCAATTAAGTATGTCTACTACTGAGCAGTCTTAATGTAATCAAACA
ACAACATTAATTTTCTTCTGTCTCTTTTTTTTTCAGGAGAAACCAAATTC
CAAATGTCTGCTAAGGAGCTACTTAGAGGAAAATCATTACGAACTATTCT
GGTCTTACATGTATTCTAAAAAGACTGATGGCGAGAACGGTTGGTTCTTA
GCTTTAAAAAGGAACGGTAAAATCAGGAAACCAGCTAATACAAAAATCGG
AGACCGACAGACTATGTTTTTCGTGCATCGAGCAGATGATATTCCAAGCG
GATCTTGATTTCCAATTGGTTCATTGAGCAGAGTGAGGATTCGATGAGCT
GTAATGATACGTTGCTATGAAACCAAGTGCAAGTTGTTATTTGTCAAAAA
TGACGTCAATGAAGATCTGATTGGTAGAAAATGATATCATTAAGTAATCC
AAAATTGACTGCATATNCAGTGCAAGTTGTTATTCGTCAAAAATGACGTC
AATGAAGATCTGATTGGTAGAAAATGATATCATTATGTAATAAATTGACT
GAATATTGAATCTGGTCAAGAAACGGAAGAATGTTATCCATAGCGAAAAA
GCTAGAACGGATTGGTGTGACATGAAATATTGTTCATGCCAAGAGTTAAA
GTGGTTGTACCGACAATAAAAGCTAGAATGGAACGCTAGAAATTAATAGA
ATTCGCAATTGTGAATCTGTATAAATATCAATGTGCCTAAAACAGACAAT
GTAACAATTCAAACGGTGGACCAATTCTAGAAAAATAAAAACGAAAGTGT
TTTTAAAAAGGAGAATTCCATGGCTAAATTTTCCCTGAAAAGTGAAAAGA
TATTCCTGAAAAATTATCGATTGTATTTTTTTATCATATTTTTGTAGCTA
ATGGAAGCAGAAAATTTAACAAAATAATTTATTTTATCAAGGTTTATTAC
AAATATTTTCGACCCACTTTATTAGGGTTTTATTTTATAACTTATTAACT
TACATAATGAATTAAAATTGTGGTAAATCTTTTTCAAATTATTTTGAATG
AAATTAAGTTCTTGATTCAAATTTTTATGGTCGAAAAATGGTAAGTATTA
TTTTTTGTAAAGTTTTAAGAGTTTTTTCCCCGTCCTTTAAAAATGTAAAT
ATGAAAAAATATTTTATGATAAATTATGTTTAAATATAAGTTATACGTTG
G

Coding sequence (CDS) from alignment at scaffold_404:597855..607205-

>TCONS_00063950 ID=TCONS_00063950|Name=TCONS_00063950|organism=Clytia hemisphaerica|type=CDS|length=4290bp|location=Sequence derived from alignment at scaffold_404:597855..607205- (Clytia hemisphaerica)
GAGAAACCAAATTCCAAATGTCTGCTAAGGAGCTACTTAGAGGAAAATCA
TTACGAACTATTCTGGTCTTACATGTATTCTAAAAAGACTGATGGCGAGA
ACGGTTGGTTCTTAGCTTTAAAAAGGAACGGTAAAATCAGGAAACCAGCT
AATACAAAAATCGGAGACCGACAGACTATGTTTTTCGTGCATCGAGCAGA
TGATATTCCAAGCGGATCTTGATTATATTCGTCATTGAGAGGATGTCAAA
AGACGCGGTCCGTCTGAAAGGTGAAGCCGCCAATAAATACATCTGTATCA
ATAAGAGGAGAAAGCTATTCACAAGGATACCGTAGAACGGGCAACCAACA
TCAACTACTACCCGACTCAACGGACGATACCCTGACAGCAAACTTAGACA
TTGACACAAGTGAAGACTTATCGAGTACATCATTCATAAAGAAAATCGAT
TCCAATATTCAAGAACTCGAAAAAGACACTTCAACAAAAGATCTAGATTT
AAAAGCGATGGAAAACCTCGATAAAACCGACGAATCAACGAATCAACGAA
ATACGCGACATAATACTGGGAAAGATCAGAACACTCAAGGCATGAGCACT
AAAAAGACACGCGTTAATAAAGCAGATCGTGTTGTACCGAGCACGGTTCA
CGCTATCTTAAATGCACCAACGAACACAATGAGAGCTTACTTACGTTCGA
AGACTGGACTCTATTTAAGGATGGGACCCAATGGTGAATTGGGTGGCACA
AGAAAAATGAAAGATAAGCATGATATTCGGATTATTCATCATCACGTGTT
GTTACGAGCAAAAGGCATTAAGTTTTACATGCGATATCCTTATTCGCTAC
TTAAAGCGGAGAAACCAAATTCCAAATGTCTGCTAAGGAGCTACTTAGAG
GAAAATCATTACGAACTATTCTGGTCTTACATGTATTCTAAAAAGACTGA
TGGCGAGAACGGTTGGTTCTTAGCTTTAAAAAGGAACGGTAAAATCAGGA
AACCAGCTAATACAAAAATCGGAGACCGACAGACTATGTTTTTCGTGCAT
CGAGCAGATGATATTCCAAGCGGATCTTGATTATATTCGTCATTGAGAGG
ATGTCAAAAGACGCGGTCCGTCTGAAAGGTGAAGCCGCCAATAAATACAT
CTGTATCAATAAGAGGAGAAAGCTATTCACAAGGATACCGTAGAACGGGC
AACCAACATCAACTACTACCCGACTCAACGGACGATACCCTGACAGCAAA
CTTAGACATTGACACAAGTGAAGACTTATCGAGTACATCATTCATAAAGA
AAATCGATTCCAATATTCAAGAACTCGAAAAAGACACTTCAACAAAAGAT
CTAGATTTAAAAGCGATGGAAAACCTCGATAAAACCGACGAATCAACGAA
TCAACGAAATACGCGACATAATACTGGGAAAGATCAGAACACTCAAGGCA
TGAGCACTAAAAAGACACGCGTTAATAAAGCAGATCGTGTTGTACCGAGC
ACGGTTCACGCTATCTTAAATGCACCAACGAACACAATGAGAGCTTACTT
ACGTTCGAAGACTGGACTCTATTTAAGGATGGGACCCAATGGTGAATTGG
GTGGCACAAGAAAAATGAAAGATAAGCATGATATTCGGATTATTCATCAT
CACGTGTTGTTACGAGCAAAAGGCATTAAGTTTTACATGCGATATCCTTA
TTCGCTACTTAAAGCGGAGAAACCAAATTCCAAATGTCTGCTAAGGAGCT
ACTTAGAGGAAAATCATTACGAACTATTCTGGTCTTACATGTATTCTAAA
AAGACTGATGGCGAGAACGGTTGGTTCTTAGCTTTAAAAAGGAACGGTAA
AATCAGGAAACCAGCTAATACAAAAATCGGAGACCGACAGACTATGTTTT
TCGTGCATCGAGCAGATGATATTCCAAGCGGATCTTGATTATATTCGTCA
TTGAGAGGATGTCAAAAGACGCGGTCCGTCTGAAAGGTGAAGCCGCCAAT
AAATACATCTGTATCAATAAGAGGAGAAAGCTATTCACAAGGATACCGTA
GAACGGGCAACCAACATCAACTACTACCCGACTCAACGGACGATACCCTG
ACAGCAAACTTAGACATTGACACAAGTGAAGACTTATCGAGTACATCATT
CATAAAGAAAATCGATTCCAATATTCAAGAACTCGAAAAAGACACTTCAA
CAAAAGATCTAGATTTAAAAGCGATGGAAAACCTCGATAAAACCGACGAA
TCAACGAATCAACGAAATACGCGACATAATACTGGGAAAGATCAGAACAC
TCAAGGCATGAGCACTAAAAAGACACGCGTTAATAAAGCAGATCGTGTTG
TACCGAGCACGGTTCACGCTATCTTAAATGCACCAACGAACACAATGAGA
GCTTACTTACGTTCGAAGACTGGACTCTATTTAAGGATGGGACCCAATGG
TGAATTGGGTGGCACAAGAAAAATGAAAGATAAGCATGATATTCGGATTA
TTCATCATCACGTGTTGTTACGAGCAAAAGGCATTAAGTTTTACATGCGA
TATCCTTATTCGCTACTTAAAGCGGAGAAACCAAATTCCAAATGTCTGCT
AAGGAGCTACTTAGAGGAAAATCATTACGAACTATTCTGGTCTTACATGT
ATTCTAAAAAGACTGATGGCGAGAACGGTTGGTTCTTAGCTTTAAAAAGG
AACGGTAAAATCAGGAAACCAGCTAATACAAAAATCGGAGACCGACAGAC
TATGTTTTTCGTGCATCGAGCAGATGATATTCCAAGCGGATCTTGATTAT
ATTCGTCATTGAGAGGATGTCAAAAGACGCGGTCCGTCTGAAAGGTGAAG
CCGCCAATAAATACATCTGTATCAATAAGAGGAGAAAGCTATTCACAAGG
ATACCGTAGAACGGGCAACCAACATCAACTACTACCCGACTCAACGGACG
ATACCCTGACAGCAAACTTAGACATTGACACAAGTGAAGACTTATCGAGT
ACATCATTCATAAAGAAAATCGATTCCAATATTCAAGAACTCGAAAAAGA
CACTTCAACAAAAGATCTAGATTTAAAAGCGATGGAAAACCTCGATAAAA
CCGACGAATCAACGAATCAACGAAATACGCGACATAATACTGGGAAAGAT
CAGAACACTCAAGGCATGAGCACTAAAAAGACACGCGTTAATAAAGCAGA
TCGTGTTGTACCGAGCACGGTTCACGCTATCTTAAATGCACCAACGAACA
CAATGAGAGCTTACTTACGTTCGAAGACTGGACTCTATTTAAGGATGGGA
CCCAATGGTGAATTGGGTGGCACAAGAAAAATGAAAGATAAGCATGATAT
TCGGATTATTCATCATCACGTGTTGTTACGAGCAAAAGGCATTAAGTTTT
ACATGCGATATCCTTATTCGCTACTTAAAGCGGAGAAACCAAATTCCAAA
TGTCTGCTAAGGAGCTACTTAGAGGAAAATCATTACGAACTATTCTGGTC
TTACATGTATTCTAAAAAGACTGATGGCGAGAACGGTTGGTTCTTAGCTT
TAAAAAGGAACGGTAAAATCAGGAAACCAGCTAATACAAAAATCGGAGAC
CGACAGACTATGTTTTTCGTGCATCGAGCAGATGATATTCCAAGCGGATC
TTGATTATATTCGTCATTGAGAGGATGTCAAAAGACGCGGTCCGTCTGAA
AGGTGAAGCCGCCAATAAATACATCTGTATCAATAAGAGGAGAAAGCTAT
TCACAAGGATACCGTAGAACGGGCAACCAACATCAACTACTACCCGACTC
AACGGACGATACCCTGACAGCAAACTTAGACATTGACACAAGTGAAGACT
TATCGAGTACATCATTCATAAAGAAAATCGATTCCAATATTCAAGAACTC
GAAAAAGACACTTCAACAAAAGATCTAGATTTAAAAGCGATGGAAAACCT
CGATAAAACCGACGAATCAACGAATCAACGAAATACGCGACATAATACTG
GGAAAGATCAGAACACTCAAGGCATGAGCACTAAAAAGACACGCGTTAAT
AAAGCAGATCGTGTTGTACCGAGCACGGTTCACGCTATCTTAAATGCACC
AACGAACACAATGAGAGCTTACTTACGTTCGAAGACTGGACTCTATTTAA
GGATGGGACCCAATGGTGAATTGGGTGGCACAAGAAAAATGAAAGATAAG
CATGATATTCGGATTATTCATCATCACGTGTTGTTACGAGCAAAAGGCAT
TAAGTTTTACATGCGATATCCTTATTCGCTACTTAAAGCG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_040078	XLOC_040078	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00063950-protein	TCONS_00063950-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_404	supercontig	scaffold_404:597855..607205 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.28494	0	0.180558	0.151204	0	1.79162	1.15154	1.07721	1.93407	0.440671	4.51063	4.10647	0	0.380926	5.42169	3.76593	2.37424	2.7131	0.499783	2.03581	127.523	148.403	0.709613	0.184536

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR002209	Fibroblast_GF_fam
IPR008996	IL1/FGF

Vocabulary: **Molecular Function**
Term	Definition
GO:0008083	growth factor activity

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008083	growth factor activity

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00063950 vs. Swiss-Prot (Human)

BLAST of TCONS_00063950 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00063950 (transcript) - C. hemisphaerica