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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063973 ID=TCONS_00063973|Name=TCONS_00063973|organism=Clytia hemisphaerica|type=transcript|length=1184bp
gttctaataaaaaacaaacgtgtacCACAAAAACTCAGGATAGAAGATAA
GATGAAATCATTTAGTCTACCTAGACTAGCTAATTTTAGAGATATGAAGG
TTATGTATAGAGGgcaaaccattgagtttaaagcccgaagggctagagta
gaatctctaacctttctcaggcaagaaaaagtgaagccttaaaaaaatgc
gccgtatttttgacgacagttTGAATCTAGCCATTCTTTTGTTtacaatt
gatatttttttcgaaatttagcggtaaattttagtttcaatctgtcattt
gtgtaaaaaccaggcgagccgctcaaggccgcgcagcTTTGATAgggttt
gttggcttcaaatcctaccaaagagattgccTTCGGCTTCCACTTAATTG
GGGGAAACTCCCATACTGTAACTTAATACCTCattcaaaaaatgatttat
aTTTATAATCATTTATAAGTCACttagccggcacacaacgttgtttcaac
gtttatctaacgttcacaacgtccatataacattaaattaacgtttaaac
aacgttgtgtgccagctgggcaccATAGAAAACTCTTCAAAGTTAGACTT
CGAAGTTGAAATAAGCTGAATAAGCagaatacaataaaaaaattagaact
TGGAAGTTGGAGGCGAACGAATTTTCCCATGTTTGGAGAGTCATAAGTCA
TAACGAGACACGAGACTCAATTCTGGTCAAAtccttataagaaaaattaa
gaataatctCAGACTCAGATTTTAGAAATgactaaaaaaataaatgtttt
gaGGCATTATTTAGGGGATTTAGTGAGCATTTCAAAACATTAAAACCTGA
TTAGAAATGCAGAGTCTAACCCCGAATTTCCTGCTTTCTATAAAAAAGAA
CCTGCAACCTTGCCTAAAACTCAAATTCAAACTACCCCGTATCACAAAGT
ATTAGAGCGTGTGCTTATATTGAAACACACAACACCCCAGCATCACCAAT
ATTTCCAAATCTACAGTAATCAATTATTACAGTGAAGACGCTCTAAATAA
TTTTCCTTCAAGTTAGTCTTCaagtactctgtaccagagtgtatctcacg
attatcgtagcgtagttcctctacggcaatgaattttgaaattggccgta
gatattgggtttgtgtacagacaagtcTTCAAGC Run BLAST on NCBI transcript from alignment at scaffold_404:425534..426717 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063973 ID=TCONS_00063973|Name=TCONS_00063973|organism=Clytia hemisphaerica|type=transcript|length=1184bp|location=Sequence derived from alignment at scaffold_404:425534..426717 (Clytia hemisphaerica)
GCTTGAAgacttgtctgtacacaaacccaatatctacggccaatttcaaa
attcattgccgtagaggaactacgctacgataatcgtgagatacactctg
gtacagagtacttGAAGACTAACTTGAAGGAAAATTATTTAGAGCGTCTT
CACTGTAATAATTGATTACTGTAGATTTGGAAATATTGGTGATGCTGGGG
TGTTGTGTGTTTCAATATAAGCACACGCTCTAATACTTTGTGATACGGGG
TAGTTTGAATTTGAGTTTTAGGCAAGGTTGCAGGTTCTTTTTTATAGAAA
GCAGGAAATTCGGGGTTAGACTCTGCATTTCTAATCAGGTTTTAATGTTT
TGAAATGCTCACTAAATCCCCTAAATAATGCCtcaaaacatttatttttt
tagtcATTTCTAAAATCTGAGTCTGagattattcttaatttttcttataa
ggaTTTGACCAGAATTGAGTCTCGTGTCTCGTTATGACTTATGACTCTCC
AAACATGGGAAAATTCGTTCGCCTCCAACTTCCAagttctaattttttta
ttgtattctGCTTATTCAGCTTATTTCAACTTCGAAGTCTAACTTTGAAG
AGTTTTCTATggtgcccagctggcacacaacgttgtttaaacgttaattt
aatgttatatggacgttgtgaacgttagataaacgttgaaacaacgttgt
gtgccggctaaGTGACTTATAAATGATTATAAAtataaatcattttttga
atGAGGTATTAAGTTACAGTATGGGAGTTTCCCCCAATTAAGTGGAAGCC
GAAggcaatctctttggtaggatttgaagccaacaaacccTATCAAAgct
gcgcggccttgagcggctcgcctggtttttacacaaatgacagattgaaa
ctaaaatttaccgctaaatttcgaaaaaaatatcaattgtaAACAAAAGA
ATGGCTAGATTCAaactgtcgtcaaaaatacggcgcatttttttaaggct
tcactttttcttgcctgagaaaggttagagattctactctagcccttcgg
gctttaaactcaatggtttgcCCTCTATACATAACCTTCATATCTCTAAA
ATTAGCTAGTCTAGGTAGACTAAATGATTTCATCTTATCTTCTATCCTGA
GTTTTTGTGgtacacgtttgttttttattagaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063973-exon-scaffold_404-1491911889:425534..426717 | TCONS_00063973-exon-scaffold_404-1491911889:425534..426717 | Clytia hemisphaerica | exon |
| TCONS_00063973-exon-scaffold_404-1510915933:425534..426717 | TCONS_00063973-exon-scaffold_404-1510915933:425534..426717 | Clytia hemisphaerica | exon |
| TCONS_00063973-exon-scaffold_404-1575043694:425534..426717 | TCONS_00063973-exon-scaffold_404-1575043694:425534..426717 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_404 | supercontig | scaffold_404:425534..426717 . |
Blast
The following BLAST results are available for this feature:
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