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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063980 ID=TCONS_00063980|Name=TCONS_00063980|organism=Clytia hemisphaerica|type=transcript|length=1104bp
CTTTTACATCCCGGAGGGTGCAAGCCATTATGGTACCCTTTTTCATACCT
CAAGTCTCTTTTGACAAGTAAAAActtctctttgttttgattctaTCTAT
gtagacaattttttttcttcacattTTCTTTCGCAACAAGATGATGCAAT
AGAAAGTGACGTCACGGCGACCTTCGAACATTACATCGTTCGAAAAGGGC
GAAAAACTCATCCGggtagtttttttttacatagatttccaaccaatcag
attcattCTAAAGATAAACAATTTGCTCGCTCTTTATTCGCGAggttgta
aaaaaaattttatcaacaAGAGCGTGTTCTTCTGAAAGCAGCTTTCAAAA
TGCAGGTGAATCAGGATTAATTGTAAGAAGAGCTTTTCTTTATATAATTT
TCGTAGTTTGGAAGAAGGTCTTTCTATAAAACTCCTAATTTATACTTATA
CGCACAAACTTGCCTACAAAAACTGGCCAAACATTTCGCTTTTATAATCA
GATGATAttaaaatcgaactttcgatCAAACTTTTTTAAGAGACGGAGCT
TTTTAACCGAAATTCAATGAAACTTTTTAACCGAAATTCAATGAAACTTT
TTTACCGAAATTCGgtttgatatttttaaccgAAATTCGGTAAAACCCTT
TAACCGAAATTCGCTAAGACTCTTTTAACCGAATTTTGGTAAATCTCTTT
TACCGAAATTTACCGAAATTCGTTAAAACTTTAACCGAATTTCACAAACT
TTAGCCGAATTCGTTAAACTTTTTTGCCGAAGTGATTCGGATAAAAAGCC
GAATTTAACCGAAAGGACTTAGCCGAAATTcggttatatttttgagaaga
tcccttattcactaattcttaatggagtgaactttaaacctgaacttttt
ggattggaatctggcaagagtgctcttagaaaaatgcaagccaCCTTTTT
CACTacttcttaatggagtgaactttaaacctgaactttttggattggaa
tctggcaagagtgctcttagaaaaatgcaagccaCCTTTTTCACTacttc
ttaatggagtgaactttaaacctgaactttttggattggaatctgGCGAG
AGTG Run BLAST on NCBI transcript from alignment at scaffold_404:655919..657022 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063980 ID=TCONS_00063980|Name=TCONS_00063980|organism=Clytia hemisphaerica|type=transcript|length=1104bp|location=Sequence derived from alignment at scaffold_404:655919..657022 (Clytia hemisphaerica)
CACTCTCGCcagattccaatccaaaaagttcaggtttaaagttcactcca
ttaagaagtAGTGAAAAAGGtggcttgcatttttctaagagcactcttgc
cagattccaatccaaaaagttcaggtttaaagttcactccattaagaagt
AGTGAAAAAGGtggcttgcatttttctaagagcactcttgccagattcca
atccaaaaagttcaggtttaaagttcactccattaagaattagtgaataa
gggatcttctcaaaaatataaccgAATTTCGGCTAAGTCCTTTCGGTTAA
ATTCGGCTTTTTATCCGAATCACTTCGGCAAAAAAGTTTAACGAATTCGG
CTAAAGTTTGTGAAATTCGGTTAAAGTTTTAACGAATTTCGGTAAATTTC
GGTAAAAGAGATTTACCAAAATTCGGTTAAAAGAGTCTTAGCGAATTTCG
GTTAAAGGGTTTTACCGAATTTcggttaaaaatatcaaacCGAATTTCGG
TAAAAAAGTTTCATTGAATTTCGGTTAAAAAGTTTCATTGAATTTCGGTT
AAAAAGCTCCGTCTCTTAAAAAAGTTTGatcgaaagttcgattttaaTAT
CATCTGATTATAAAAGCGAAATGTTTGGCCAGTTTTTGTAGGCAAGTTTG
TGCGTATAAGTATAAATTAGGAGTTTTATAGAAAGACCTTCTTCCAAACT
ACGAAAATTATATAAAGAAAAGCTCTTCTTACAATTAATCCTGATTCACC
TGCATTTTGAAAGCTGCTTTCAGAAGAACACGCTCTtgttgataaaattt
tttttacaaccTCGCGAATAAAGAGCGAGCAAATTGTTTATCTTTAGaat
gaatctgattggttggaaatctatgtaaaaaaaaactaccCGGATGAGTT
TTTCGCCCTTTTCGAACGATGTAATGTTCGAAGGTCGCCGTGACGTCACT
TTCTATTGCATCATCTTGTTGCGAAAGAAaatgtgaagaaaaaaaattgt
ctacATAGAtagaatcaaaacaaagagaagTTTTTACTTGTCAAAAGAGA
CTTGAGGTATGAAAAAGGGTACCATAATGGCTTGCACCCTCCGGGATGTA
AAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063980-exon-scaffold_404-1491911889:655919..657022 | TCONS_00063980-exon-scaffold_404-1491911889:655919..657022 | Clytia hemisphaerica | exon |
| TCONS_00063980-exon-scaffold_404-1510915933:655919..657022 | TCONS_00063980-exon-scaffold_404-1510915933:655919..657022 | Clytia hemisphaerica | exon |
| TCONS_00063980-exon-scaffold_404-1575043694:655919..657022 | TCONS_00063980-exon-scaffold_404-1575043694:655919..657022 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_404 | supercontig | scaffold_404:655919..657022 . |
Blast
The following BLAST results are available for this feature:
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