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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063994 ID=TCONS_00063994|Name=TCONS_00063994|organism=Clytia hemisphaerica|type=transcript|length=971bp
cgttcttgtaaaaaaacataTAGTTCAGTGGACATTCCTTTCTGAAGAAG
AGCTTTAATTGATTATTGATGtgaagcaatagataaacgaaacTTAGATT
GTATCTCAATTCTGCATCAGATAtgcttttgttatttttggtacaaggaa
aaaaatgtccagtatgatttattttgatatataaaGGGAACGAGTGGTCT
ACCGATATATACAGTCAAACATCGATACATGCAGGATAGCAAGATAATCT
TTGGGGATTGCAGTTTACCGAAAGGTTGTGAAAGAGGAATTCTTACGAGA
AAGGTAGAACAGAGCTTGGAAATAGTGCTTCTTCGTCCAATTTTTGCAAA
GTACCAGCCGTCGTAcataagaaaaacaaacataagAAGCACAGGAAAGA
CTTTGAGGAAATTCTACGACCAGATACTTAATTTTCTACTAACATGACAG
GTAGCtggagtaaaatcaaaaagtacgTTCGCGACATGACAACTTTTAAA
GGACATCGCAAATCGAGCAAAGTGATTGTTATACCAAGTCGTCCACAAAA
GGAGCGATTAGGTGCTAAGATGTCGGTCAATGAGAAGAAAGTGTTGAGAT
CCATGGCTTCACGAACATACGGTGGTGCTTATTATTAAAAGAATGTGGAC
AAAAGACTATTTATTTTGGTTGATAAACGTGGCATTGAGTTTGTCCAGAG
ATTAAACAGGTGGTTGAGAAAACTGGATTATTCTCCAATCAATTTATCGG
CTTATCAATTTACAACTGAATCATGACGCTGACGGATAGATAGATAAATT
ggacatgaaattttgtctaaattcatTCCAATGGTGAAGAAAACCTCTCA
GCTTTCATATCATAAAGAGCACCGATTGGACTGTTATTCTTTGATacatt
ccaatttttttttaaaatcttgtATATCAACAtgactttgtaatttttgt
aaatacagaaaagatttagaa Run BLAST on NCBI transcript from alignment at scaffold_404:851323..852293 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063994 ID=TCONS_00063994|Name=TCONS_00063994|organism=Clytia hemisphaerica|type=transcript|length=971bp|location=Sequence derived from alignment at scaffold_404:851323..852293 (Clytia hemisphaerica)
ttctaaatcttttctgtatttacaaaaattacaaagtcaTGTTGATATac
aagattttaaaaaaaaattggaatgtATCAAAGAATAACAGTCCAATCGG
TGCTCTTTATGATATGAAAGCTGAGAGGTTTTCTTCACCATTGGAatgaa
tttagacaaaatttcatgtccAATTTATCTATCTATCCGTCAGCGTCATG
ATTCAGTTGTAAATTGATAAGCCGATAAATTGATTGGAGAATAATCCAGT
TTTCTCAACCACCTGTTTAATCTCTGGACAAACTCAATGCCACGTTTATC
AACCAAAATAAATAGTCTTTTGTCCACATTCTTTTAATAATAAGCACCAC
CGTATGTTCGTGAAGCCATGGATCTCAACACTTTCTTCTCATTGACCGAC
ATCTTAGCACCTAATCGCTCCTTTTGTGGACGACTTGGTATAACAATCAC
TTTGCTCGATTTGCGATGTCCTTTAAAAGTTGTCATGTCGCGAAcgtact
ttttgattttactccaGCTACCTGTCATGTTAGTAGAAAATTAAGTATCT
GGTCGTAGAATTTCCTCAAAGTCTTTCCTGTGCTTcttatgtttgttttt
cttatgTACGACGGCTGGTACTTTGCAAAAATTGGACGAAGAAGCACTAT
TTCCAAGCTCTGTTCTACCTTTCTCGTAAGAATTCCTCTTTCACAACCTT
TCGGTAAACTGCAATCCCCAAAGATTATCTTGCTATCCTGCATGTATCGA
TGTTTGACTGTATATATCGGTAGACCACTCGTTCCCtttatatatcaaaa
taaatcatactggacatttttttccttgtaccaaaaataacaaaagcaTA
TCTGATGCAGAATTGAGATACAATCTAAgtttcgtttatctattgcttca
CATCAATAATCAATTAAAGCTCTTCTTCAGAAAGGAATGTCCACTGAACT
Atatgtttttttacaagaacg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063994-exon-scaffold_404-1491911889:851323..852293 | TCONS_00063994-exon-scaffold_404-1491911889:851323..852293 | Clytia hemisphaerica | exon |
| TCONS_00063994-exon-scaffold_404-1510915933:851323..852293 | TCONS_00063994-exon-scaffold_404-1510915933:851323..852293 | Clytia hemisphaerica | exon |
| TCONS_00063994-exon-scaffold_404-1575043694:851323..852293 | TCONS_00063994-exon-scaffold_404-1575043694:851323..852293 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_404 | supercontig | scaffold_404:851323..852293 . |
Blast
The following BLAST results are available for this feature:
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