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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063996 ID=TCONS_00063996|Name=TCONS_00063996|organism=Clytia hemisphaerica|type=transcript|length=1041bp
aagagatgTCAATAGAAATACAAACAACCGATTAGCATTAGGAAGCATGT
TATCTATGATCTTGATTGATCTCTATAAAAAGGGGGATATTCAATAAGAG
AAATTCAGATAACACTGACAAAGCACGAAGTGAACACACACTACGACACT
CaataattctttaaaacaaacaaagatgaCTTTAAACGGGACTTTGAACA
AACAAAAATCGTTACTCAAACAACACAAATACAATGAATTGACGGTACCA
GCCGAAGCTGCTCGACGATCTGAGAATTTGCTCAGGAAAAACGTATTGAA
AGCCTTGGGAGATGAAAGCTTCAACTTTGGATGGCGCCAACAGCCTTTTA
TACCAAGAAATTGTGGCAAAACTATTTCGGGGACTGAGAAGATTATGCTA
AAACAGATGGGTGCTAGGGGGCTTCTTCGATGATCACTCACTGCAAGACT
AGCGGAGATTCAAATGGAATTAGTTAACTGAGGATGAGATTGGTCCAAAT
ACATGCTCCATCgtgaaactgaaactgatcTCTTCGCTTTCAATGATTGA
CGGGTACAGTATTTGACGACATACCTTTTGAACGGAAGAAAAAAGACATT
GGATTTAAACGAAGCCCTATAACAGGCGGATAGAACGACGATTTCGCGGC
TGAAGCTATGCGATTGAAATGTGGAATGAATATAACATTTTAGTTTGAAA
GGGAGAGATATTTAATTCTCACATGGTTGAAATGAACATGGACACGAAAA
GAACAGACAGAATACGTGAACAGACAAAGGATTGCCACTTGACTGGtaga
aattaaaatatttctctTAATAATAATGTAGATAAAGTTTACTTATTGAA
GCTTTCAAAGTTCAAAGAACAAACTTCAACCAagttttgtttgttgttgt
atTTCTTATTTTGTGAAACAAGAGGGTATAGGTAGACTAAATTTTCGTCT
ATAAAAAATTAAGTGCTTTGCAGTAGACTTCAAAGTTAAAACCGCATCAA
GCGCCTTGCGGACCTCTTTATTTCGAGTTCATATTTTGGAC Run BLAST on NCBI transcript from alignment at scaffold_404:878163..879203 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063996 ID=TCONS_00063996|Name=TCONS_00063996|organism=Clytia hemisphaerica|type=transcript|length=1041bp|location=Sequence derived from alignment at scaffold_404:878163..879203 (Clytia hemisphaerica)
GTCCAAAATATGAACTCGAAATAAAGAGGTCCGCAAGGCGCTTGATGCGG
TTTTAACTTTGAAGTCTACTGCAAAGCACTTAATTTTTTATAGACGAAAA
TTTAGTCTACCTATACCCTCTTGTTTCACAAAATAAGAAatacaacaaca
aacaaaactTGGTTGAAGTTTGTTCTTTGAACTTTGAAAGCTTCAATAAG
TAAACTTTATCTACATTATTATTAagagaaatattttaatttctaCCAGT
CAAGTGGCAATCCTTTGTCTGTTCACGTATTCTGTCTGTTCTTTTCGTGT
CCATGTTCATTTCAACCATGTGAGAATTAAATATCTCTCCCTTTCAAACT
AAAATGTTATATTCATTCCACATTTCAATCGCATAGCTTCAGCCGCGAAA
TCGTCGTTCTATCCGCCTGTTATAGGGCTTCGTTTAAATCCAATGTCTTT
TTTCTTCCGTTCAAAAGGTATGTCGTCAAATACTGTACCCGTCAATCATT
GAAAGCGAAGAgatcagtttcagtttcacGATGGAGCATGTATTTGGACC
AATCTCATCCTCAGTTAACTAATTCCATTTGAATCTCCGCTAGTCTTGCA
GTGAGTGATCATCGAAGAAGCCCCCTAGCACCCATCTGTTTTAGCATAAT
CTTCTCAGTCCCCGAAATAGTTTTGCCACAATTTCTTGGTATAAAAGGCT
GTTGGCGCCATCCAAAGTTGAAGCTTTCATCTCCCAAGGCTTTCAATACG
TTTTTCCTGAGCAAATTCTCAGATCGTCGAGCAGCTTCGGCTGGTACCGT
CAATTCATTGTATTTGTGTTGTTTGAGTAACGATTTTTGTTTGTTCAAAG
TCCCGTTTAAAGtcatctttgtttgttttaaagaattattGAGTGTCGTA
GTGTGTGTTCACTTCGTGCTTTGTCAGTGTTATCTGAATTTCTCTTATTG
AATATCCCCCTTTTTATAGAGATCAATCAAGATCATAGATAACATGCTTC
CTAATGCTAATCGGTTGTTTGTATTTCTATTGAcatctctt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063996-exon-scaffold_404-1491911889:878163..879203 | TCONS_00063996-exon-scaffold_404-1491911889:878163..879203 | Clytia hemisphaerica | exon |
| TCONS_00063996-exon-scaffold_404-1510915933:878163..879203 | TCONS_00063996-exon-scaffold_404-1510915933:878163..879203 | Clytia hemisphaerica | exon |
| TCONS_00063996-exon-scaffold_404-1575043694:878163..879203 | TCONS_00063996-exon-scaffold_404-1575043694:878163..879203 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_404 | supercontig | scaffold_404:878163..879203 . |
Blast
The following BLAST results are available for this feature:
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