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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064015 ID=TCONS_00064015|Name=TCONS_00064015|organism=Clytia hemisphaerica|type=transcript|length=1175bp
acaatatctcgacaaacctgtatacttttttttggtgcacccggtatata
tatttttactgATCTTTTGCACAACAATGCAAAAATGTGACCAACCCTGA
TATTGGTAAAAAAAGCTAGGatagaattttttgttttcgattttttaGTT
TAATCTTTTCAGGGGGTACAATAGCCTTGTATGTACCAAAAAATTGTCTT
CTTTCTCCTTCAAatagtcataaaaattgaattgtatacaaattgaacaa
aaagtaaGGTCAGAGGCATATGGGAtgttctggagtttttataagatact
tcactaattggtcattaaaagtAACAGAGATAACGCGATaacttttagaa
aaagtaacaaaattgttttattacaggttaacgaccaactaaatcaaata
agagcttgtaaaaactccagcttgtcccaggCATATGCAAAATTTATCTA
GCTTTCCATCGGTTATACTTTTATTGTGTCCCCATCATGcgaaagtaaaa
aaacaacCCCCTGGTATGACTTATTCTgtaattttgttttctaaagaatt
ttgttttgatttataaaGATCTGCAGACCAGATATGTGCGCACAAGTTTT
AAGAACAATTATCGATATCGGTCTTTTATTTCAAATGTCTGGTCTTTTTT
TCAAACGTCGAACGAAATGATtcgaaatgttaaaaaaataaacaaactca
gTAGAGACGAGGGAAGGAAGAAAAAGAGTTAATTCTGTCAGAAAAAATGT
AAGTCTAGAAAGTTTGGTGGTGTTTCAGCtttccaaagaaatttatcAGA
AGTTTTTGGGCTTCAAGTGGAATCTTGGAATGTAACTTCAGAAGTCTCTT
TACAAGTATTGAATATTTTAATAACACGTTTAACACCTCTTCAAGCGATG
GTTTTCTCATCCAGCAACAGAAGCAATCATGCAAAGCAGAAAACTTAGGT
ATATTTTTATAACACAGGATTCAAAAACGTTTGTCACACATTATATATTG
GAATTTTTAAGCTGTGTTGAGAGTGATTCTTATTATTTACACAATCTATA
TGGTACGTAGGTGGTGAGgtcttttttagtttttggtGGAGTCTCTTCTG
ACAAAAGATATTGAATTGAAGAtatctcaggattgaatcatcataggaat
cttcttttttttggtacaaaggtgc Run BLAST on NCBI transcript from alignment at scaffold_406:31427..32601- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064015 ID=TCONS_00064015|Name=TCONS_00064015|organism=Clytia hemisphaerica|type=transcript|length=1175bp|location=Sequence derived from alignment at scaffold_406:31427..32601- (Clytia hemisphaerica)
ACAATATCTCGACAAACCTGTATACTTTTTTTTGGTGCACCCGGTATATA
TATTTTTACTGATCTTTTGCACAACAATGCAAAAATGTGACCAACCCTGA
TATTGGTAAAAAAAGCTAGGATAGAATTTTTTGTTTTCGATTTTTTAGTT
TAATCTTTTCAGGGGGTACAATAGCCTTGTATGTACCAAAAAATTGTCTT
CTTTCTCCTTCAAATAGTCATAAAAATTGAATTGTATACAAATTGAACAA
AAAGTAAGGTCAGAGGCATATGGGATGTTCTGGAGTTTTTATAAGATACT
TCACTAATTGGTCATTAAAAGTAACAGAGATAACGCGATAACTTTTAGAA
AAAGTAACAAAATTGTTTTATTACAGGTTAACGACCAACTAAATCAAATA
AGAGCTTGTAAAAACTCCAGCTTGTCCCAGGCATATGCAAAATTTATCTA
GCTTTCCATCGGTTATACTTTTATTGTGTCCCCATCATGCGAAAGTAAAA
AAACAACCCCCTGGTATGACTTATTCTGTAATTTTGTTTTCTAAAGAATT
TTGTTTTGATTTATAAAGATCTGCAGACCAGATATGTGCGCACAAGTTTT
AAGAACAATTATCGATATCGGTCTTTTATTTCAAATGTCTGGTCTTTTTT
TCAAACGTCGAACGAAATGATTCGAAATGTTAAAAAAATAAACAAACTCA
GTAGAGACGAGGGAAGGAAGAAAAAGAGTTAATTCTGTCAGAAAAAATGT
AAGTCTAGAAAGTTTGGTGGTGTTTCAGCTTTCCAAAGAAATTTATCAGA
AGTTTTTGGGCTTCAAGTGGAATCTTGGAATGTAACTTCAGAAGTCTCTT
TACAAGTATTGAATATTTTAATAACACGTTTAACACCTCTTCAAGCGATG
GTTTTCTCATCCAGCAACAGAAGCAATCATGCAAAGCAGAAAACTTAGGT
ATATTTTTATAACACAGGATTCAAAAACGTTTGTCACACATTATATATTG
GAATTTTTAAGCTGTGTTGAGAGTGATTCTTATTATTTACACAATCTATA
TGGTACGTAGGTGGTGAGGTCTTTTTTAGTTTTTGGTGGAGTCTCTTCTG
ACAAAAGATATTGAATTGAAGATATCTCAGGATTGAATCATCATAGGAAT
CTTCTTTTTTTTGGTACAAAGGTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064015-exon-scaffold_406-1575043694:31427..32601 | TCONS_00064015-exon-scaffold_406-1575043694:31427..32601 | Clytia hemisphaerica | exon |
| TCONS_00064015-exon-scaffold_406-1510915933:31427..32601 | TCONS_00064015-exon-scaffold_406-1510915933:31427..32601 | Clytia hemisphaerica | exon |
| TCONS_00064015-exon-scaffold_406-1491911889:31427..32601 | TCONS_00064015-exon-scaffold_406-1491911889:31427..32601 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_406 | supercontig | scaffold_406:31427..32601 - |
Blast
The following BLAST results are available for this feature:
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