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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064019 ID=TCONS_00064019|Name=TCONS_00064019|organism=Clytia hemisphaerica|type=transcript|length=1132bp
ATTCCCATCTGTTAAATGTGGATTATTATTCAGATCCCGGTTGTTTTCAT
CCAGGTAGGAGGCGTTTCAATATCGGTTTGGTAGATTGTATTTAGGATGG
TTTCGTCCAAAAAAGGAACCACTTTACGGCGCCGAAAATCTCCGAGTCAG
GGCAATTTCCATGATAGATATTCCATCGTTCCCGTACATTTCCTCCCGCC
CCCACTATATcagacagctgattggttatgATATTTTCGTTGTCATGGTT
TCGATCTTTTTGTAtatccattttgaattttttgcattCAAAGAATTTCC
TGGAAGACTTTCTCGACCTGTCGACCTCGAAGCTTATATACTGAAAATTC
TATAGATTAGTAAATTTATTGCTCTGCTGTCTTTGTTATTGGTGTTGCAA
TTATCACTTGGAAAAATCATATCATCAGGTTCATTCACCATATATAGTTT
TGGATTTATAACACCACCTACCCAACCTCGGTCCCTGcctattatcagct
ttttgattcttactgatagcgctagattattctctggcgtcaatcagtaa
cgtaaataaagcctgggatacacggggacgaggttgaccACCTACCTACA
CACAAGTATAACACAACTTATCACTTATggtatcatcatcatcatcatca
ttttaTCTATAGCTGTATAGGGAAGTacattttgttgactttttcctCAC
TTAGTTTCACTGCTTTGTGGGAAGGAAATATATTGAATTAGGGTTTCACT
CCGTTCTTTATAGACCTTTTAAAAGTTTCACTTAATTTTTGCGAAAGAAA
TTGTTTTAGGCATAATATAATATCATTCATTTATCAACGATATCgataac
attaaaaaaaattaatactgTAACAGAACAGTCCCACACTGCTACAAATT
ATCCAATACCAATCCGTCGATCGTGTGCGTCAAAAAAATGTCAAGGCGAT
CACGACTTTCCCCACTAgtagagttttggatatttccgaccatcaaatga
tattgccgaccatcaaaagatatttccgaccatcaaatgatatttccgac
cattacgctatgatatatccgaccattaaatttccaaattttcagagttt
gggatatttccgaccatcaaaagatatttccg Run BLAST on NCBI transcript from alignment at scaffold_406:11725..12856 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064019 ID=TCONS_00064019|Name=TCONS_00064019|organism=Clytia hemisphaerica|type=transcript|length=1132bp|location=Sequence derived from alignment at scaffold_406:11725..12856 (Clytia hemisphaerica)
cggaaatatcttttgatggtcggaaatatcccaaactctgaaaatttgga
aatttaatggtcggatatatcatagcgtaatggtcggaaatatcatttga
tggtcggaaatatcttttgatggtcggcaatatcatttgatggtcggaaa
tatccaaaactctacTAGTGGGGAAAGTCGTGATCGCCTTGACATTTTTT
TGACGCACACGATCGACGGATTGGTATTGGATAATTTGTAGCAGTGTGGG
ACTGTTCTGTTAcagtattaattttttttaatgttatcGATATCGTTGAT
AAATGAATGATATTATATTATGCCTAAAACAATTTCTTTCGCAAAAATTA
AGTGAAACTTTTAAAAGGTCTATAAAGAACGGAGTGAAACCCTAATTCAA
TATATTTCCTTCCCACAAAGCAGTGAAACTAAGTGaggaaaaagtcaaca
aaatgtACTTCCCTATACAGCTATAGAtaaaatgatgatgatgatgatga
taccATAAGTGATAAGTTGTGTTATACTTGTGTGTAGGTAGGTggtcaac
ctcgtccccgtgtatcccaggctttatttacgttactgattgacgccaga
gaataatctagcgctatcagtaagaatcaaaaagctgataataggCAGGG
ACCGAGGTTGGGTAGGTGGTGTTATAAATCCAAAACTATATATGGTGAAT
GAACCTGATGATATGATTTTTCCAAGTGATAATTGCAACACCAATAACAA
AGACAGCAGAGCAATAAATTTACTAATCTATAGAATTTTCAGTATATAAG
CTTCGAGGTCGACAGGTCGAGAAAGTCTTCCAGGAAATTCTTTGaatgca
aaaaattcaaaatggataTACAAAAAGATCGAAACCATGACAACGAAAAT
ATcataaccaatcagctgtctgATATAGTGGGGGCGGGAGGAAATGTACG
GGAACGATGGAATATCTATCATGGAAATTGCCCTGACTCGGAGATTTTCG
GCGCCGTAAAGTGGTTCCTTTTTTGGACGAAACCATCCTAAATACAATCT
ACCAAACCGATATTGAAACGCCTCCTACCTGGATGAAAACAACCGGGATC
TGAATAATAATCCACATTTAACAGATGGGAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064019-exon-scaffold_406-1491911889:11725..12856 | TCONS_00064019-exon-scaffold_406-1491911889:11725..12856 | Clytia hemisphaerica | exon |
| TCONS_00064019-exon-scaffold_406-1510915933:11725..12856 | TCONS_00064019-exon-scaffold_406-1510915933:11725..12856 | Clytia hemisphaerica | exon |
| TCONS_00064019-exon-scaffold_406-1575043694:11725..12856 | TCONS_00064019-exon-scaffold_406-1575043694:11725..12856 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_406 | supercontig | scaffold_406:11725..12856 . |
Blast
The following BLAST results are available for this feature:
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