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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064132 ID=TCONS_00064132|Name=TCONS_00064132|organism=Clytia hemisphaerica|type=transcript|length=952bp
cctccttctcacacaATCCTGTTTGGatttttcagtcagtggggtaaaaa
ataacggaccaaaacacGATAGGGATTGATTcccatgtttttcttttcga
cTGATGATTTGAATTCAGTTTTCGAACCTAAAAAAGTCAGCTGGGTGAAA
AAAAGCACAATGTTTTGCATGCAGTGATGAATTGTTTACCTGATCATttt
cagcggagacaaaaatttgagtataatttcccaccgggtaaatattttgg
ccaatctttCCCttgcattatcagctttttgatgcttgctaaaattaaaa
attccaaaaatgtcaTTTCATTTTAGAAATCAGCCAAGATATGACTAAAA
ACGGTCCAGCTCTTTTGATTTTATCCATCATCCTGTTACTAGGGTTACTG
GTAACACCAATCAATACTTTGAGTCTTCAAAGGGAAAAAGATGGCAAATC
AGCANTACTGGCAACACCAATCAATACTCTGAGTCTTCAAAGGGAAAAAG
ATGGTAAATCAGCTGTGAACTCAGATATTGCTTACGTACAATGTAGAAAG
AATGCAAAAGCATATTACGGACAATGTCGGACATTAATGATTCAACATGC
TGAAGGAATCACAGATTCTAACGAGCTTCAGAAGTTGTATAAAGTCATTC
CAGAGAATATGAAGTGTACATACCTTTGGATGCAAATGAAAGCAAAGTGC
CAAAAAGATAGACAAAATGCTGAAAAGAATTGATTTGTGTGTGAGCAATA
TGCTGTATGCCAGCATGATTTATTTATCATGATTTTACTTTGTGTAACTT
CCATTTTGATTAAAGTCaataaattatatatttttggatgaGGTTTAttt
ccaacattttttaatcgGATTCATATCAGTTCTTATCAAGAGATCCATTA
GACCAAAACTCGTGACATGATGAGTTTCACCTCGAATTCGAGTAAGACAG
CG Run BLAST on NCBI transcript from alignment at scaffold_409:52618..53569+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064132 ID=TCONS_00064132|Name=TCONS_00064132|organism=Clytia hemisphaerica|type=transcript|length=952bp|location=Sequence derived from alignment at scaffold_409:52618..53569+ (Clytia hemisphaerica)
cctccttctcacacaATCCTGTTTGGatttttcagtcagtggggtaaaaa
ataacggaccaaaacacGATAGGGATTGATTcccatgtttttcttttcga
cTGATGATTTGAATTCAGTTTTCGAACCTAAAAAAGTCAGCTGGGTGAAA
AAAAGCACAATGTTTTGCATGCAGTGATGAATTGTTTACCTGATCATttt
cagcggagacaaaaatttgagtataatttcccaccgggtaaatattttgg
ccaatctttCCCttgcattatcagctttttgatgcttgctaaaattaaaa
attccaaaaatgtcaTTTCATTTTAGAAATCAGCCAAGATATGACTAAAA
ACGGTCCAGCTCTTTTGATTTTATCCATCATCCTGTTACTAGGGTTACTG
GTAACACCAATCAATACTTTGAGTCTTCAAAGGGAAAAAGATGGCAAATC
AGCANTACTGGCAACACCAATCAATACTCTGAGTCTTCAAAGGGAAAAAG
ATGGTAAATCAGCTGTGAACTCAGATATTGCTTACGTACAATGTAGAAAG
AATGCAAAAGCATATTACGGACAATGTCGGACATTAATGATTCAACATGC
TGAAGGAATCACAGATTCTAACGAGCTTCAGAAGTTGTATAAAGTCATTC
CAGAGAATATGAAGTGTACATACCTTTGGATGCAAATGAAAGCAAAGTGC
CAAAAAGATAGACAAAATGCTGAAAAGAATTGATTTGTGTGTGAGCAATA
TGCTGTATGCCAGCATGATTTATTTATCATGATTTTACTTTGTGTAACTT
CCATTTTGATTAAAGTCaataaattatatatttttggatgaGGTTTAttt
ccaacattttttaatcgGATTCATATCAGTTCTTATCAAGAGATCCATTA
GACCAAAACTCGTGACATGATGAGTTTCACCTCGAATTCGAGTAAGACAG
CG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064132-exon-scaffold_409-1491911889:52618..53569 | TCONS_00064132-exon-scaffold_409-1491911889:52618..53569 | Clytia hemisphaerica | exon |
| TCONS_00064132-exon-scaffold_409-1510915933:52618..53569 | TCONS_00064132-exon-scaffold_409-1510915933:52618..53569 | Clytia hemisphaerica | exon |
| TCONS_00064132-exon-scaffold_409-1575043694:52618..53569 | TCONS_00064132-exon-scaffold_409-1575043694:52618..53569 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_409 | supercontig | scaffold_409:52618..53569 + |
Blast
The following BLAST results are available for this feature:
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