TCONS_00064211 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064211
Unique NameTCONS_00064211
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1858

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064211 ID=TCONS_00064211|Name=TCONS_00064211|organism=Clytia hemisphaerica|type=transcript|length=1858bp
CTGGATTTTACTCATAAAAACTTCCATTagaaaattagagaaaaatgaaa
aagcaaataaaaaatcacCCATCGAAACTTGAAACCtaaaaaccatttca
aaatgGCTTCAACAAATATTCAACCAAGCCAACAGATGATATCATCTTCA
TTTGGAGCTGTCTTGGTTGCTCTATTTACTACACCTTTTGAAGTTATCAA
GGTTCGAATGCAAGCACAACTAAAGCCAACAGctGTGAAATGTTCAATCT
TTGAGAATGTTGTAGATACACTTTGTTACTGCACCACAAAACCTGCTTTT
AATAGTCCTGTTCTCTGTACAATCCATAGTAATATTCAGACTGTACCGCC
GTTTAGATCAAGTACTGATGCTTTTATCAAGATTGTCCAAAGAGAAGGAG
TATTCAACTTATGGAAAGGATTGTCCGCTACATTAGTTCAGATGTTACCT
CAAACAGTGATTTACTATACAGCGTACGATCAAATGAAAGTTTGGTTAGG
CTTTATGGAAGGAAAACAAAATGTTTCCTCGACGCTTGTGGCAGGTGTAA
CCTCTAGATCTTTTGCTGTGATCTGCGTTTCACCAATCGAGATGATTCGA
ACGAAGTTTCAATCCAAAAGTCGTCTTGGATATAAAGAGATGTGTTCAAT
GATACTGTTCACAATCAAACAAGATGGTGTCTTCTCTATGTGGAGAGGAG
TTGGACCTACTCTACTCAGAGATGTACCATTTTCAGCATTATACTGGCTC
AGTTATGAGAAGTTGAAATCACTCAATTCAGCACCAAACTTTCTTTATTA
TTTCATGGCTGGTGCCTTGTCTGGAGTGgTCGCAGCAGTTGCAACGCAAC
CGTTCGATGTGGTCAAAACATATCGTCAAATTGAATTAGGTGAAATCAAA
GATGTGTCGTCAGCCAAAAAGCTGCCTTTCACATTCTCCATACTCAACGA
TTTACGGAAAGTGCAAGGCTTGTCGAGTCTTTATACTGGCATGAATCCAA
GGCTATTGAAAGTAGCGCCAGCCTGTGCCATCATGATCAGCACTTATGAG
TATGGTAAAAGTTACTTTGCCAAGAAGAACGATGACAAAGATGTTGGATG
AGGTACAATGAAGTGATTAGCTACCATCGAATGAATAATATTATACCCGC
CATGACATACGAGGtgcaaaaataatataattttattggttttgaCTGAT
GGTATCCTTTGAAGTGTAATCAACCCAAGGGCTTTTAACCGTGCGCTCTG
TGAAGGGGTTGAAATATGGTGCTTTTACGAACTTACTTTTGACGAATTGT
AAATTTTGCTGGTTATAAATATACACAATTATGGATAAACAGAGATAAAG
AGTTCAaacattttatcaaaacttttatcTATCATGATTTGCCAATGCAA
GGACTTACAAAAGATACACTGTCCCTAGTTCAGAAATGCTGCGTTACCTT
TACGTAAAATAAATGGCTTGAATACAATTAAAACTGCTATGCTGTTATTA
TTGGTTTGTAGCTCACAGACCATATAGTTGTGAAAGAATTTGACAATATT
TACCTTGCAtaggaagaaattatttttgaaattaattgataatttatacC
TTTATCCCCTTACCTTTCCCGCACAAGTCCGTAGGATTATTTCAAGACTT
ACGAAATAGCATTAATTCTGCCAGCCTTAAATCTTCATTTTACCGTTTGC
TACTTGTGCTTTTATCTCAATAAACATTGTTCAGAAGTGTTTAATTGGTC
TGAccgtaaaaataaaaaagtatttatttttgcatattgTTTCAGCTTAA
GTTTAACTTCATTCTTCACCTTCATAGGCTACAATTTACAGTCGATGGGc
tattcgag
Run BLAST on NCBI

transcript from alignment at scaffold_41:378824..387993-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064211 ID=TCONS_00064211|Name=TCONS_00064211|organism=Clytia hemisphaerica|type=transcript|length=9170bp|location=Sequence derived from alignment at scaffold_41:378824..387993- (Clytia hemisphaerica)
CTGGATTTTACTCATAAAAACTTCCATTAGAAAATTAGAGAAAAATGAAA
AAGCAAATAAAAAATCACCCATCGAAACTTGAAACCTAAAAACCATTTCA
AAATGGCTTCAACAAATATTCAACCAAGCCAACAGATGATATCATCTTCA
TTTGGAGCTGTCTTGGTTGCTCTATTTAGTAAGTTCTTATTATTTCAAAG
ATTGTCGTAGTTATTAAAATTTTATAAAAGAAGAATATTTTTGTGAATTG
TACACTATGTTTCAACTCGGTTTGTCTTTTTAGCTACACCTTTTGAAGTT
ATCAAGGTTCGAATGCAAGCACAACTAAAGCCAACAGGTAGAATTTTGTA
TGAAGTCACATTTATGCAATGTCAAAAACTCAATTCCTTATTTTATTAAT
ATAACACTCGAAACTAAATAATTAATTTTAATTATTAGCTGTTTAATCAG
GACTAAAATTACCCCATGTATTAAAATCTATGTTAATTTGTTAGCATAAA
AGAAAGAATGGTTCCATCAAATACCCACTGACTTTTTGTTTATTTTTAGC
TGTGAAATGTTCAATCTTTGAGAATGTTGTAGATACACTTTGTTACTGCA
CCACAAAACCTGCTTTTAATAGTCCTGTTCTCTGTACAATCCATAGTAAT
ATTCAGACTGTACCGCCGTTTAGATCAAGTACTGTAAGTATTATCGGTAA
ATTCACAAAGAATCAGTTGTATCTTGCAGCTTTCTTAATATACAAATTAT
CTTTGCTTTCATGAACTGTAATATTCTTTCCTGGATAAATTCAAACTGGC
AATCATTGAAATCTACTGTCCTAACAAAGATGTTAGTTTTTTGTGAATGA
TATGTCAAAATCGCCATCTTTCATTTCTTCAATATAAAAGTTTCACCAAT
TTTAGCCATGGTGGCTCCAGCACTAAAGATCTGCTATAATACTATTTATT
ACCTTAAGTGGATAAATTTTGGCGGGGATTGCAAAATTTGCCAAATTAAA
TCCTCGCCAAAATTTCAAAATTCGGCAATTCGCCAAATCAAATCCCCGCC
AAATTTAACAAAAAGAGAATTATGTGAAAAATCACAACTTTTTAGTATAA
CTTTTAGTAATTTTCACCCATTTCAGTGTGATAAATTTCCAATTCGCCAA
ATTAAATCCCCGCCAAATTTTACGAAATTGATCTTTCGCCAAATTAAATC
CGCGCCAAAAATTGTATTTTGGCCAATCGCCAAATTAAATCCACGCCAAA
ATCTATCCACTTAAGGTATTTTAAGAAGAAAGTTAAACAGGCTTTTTGTC
ATGGGTTATTATTTCTAATAAAAATTATTTCGTTGAATACTTGGCTGCTA
CTACCCTCTTCAAAATTACAAATTATTATTCTTTCAGGATGCTTTTATCA
AGATTGTCCAAAGAGAAGGAGTATTCAACTTATGGAAAGGATTGTCCGCT
ACATTGTAAGTCTAAAGCATGGCTCCCCTTAGTCCCCTTTAACAGTCTCT
GTTCATTGGCTGAAAGATTGGCTTTATCTGAAAGAGTTAACATTGAATTT
GAAGTGAAATAATGCTTAATATAATTGATTCTACTTGATTCGATTTCACT
TAGCCAATGATCTTTTAAAGAATAAATCGAATCCAACCATTTCAAGAGAA
AAAGGTTTTTTTTATTTGATTGGGGTTGATTGGTCGATTGAACTAAAAAG
ACGTCAAAACTTTAAAAAATGTTGTTTTGTTATATTAGAGTTCAGATGTT
ACCTCAAACAGTGATTTACTATACAGCGTACGATCAAATGAAAGTTTGGT
TAGGCTTTATGGAAGGAAAACAAAATGTTTCCTCGACGCTTGTGGCAGGT
GTAACCTCTAGATGTAAGTCTTATATGTTTCTCTGGGCAGTTTTCTCTAT
TAGTGGCACCCCCAATCTCTTATTCAGATTGGAGGGGTACTGCCCATTAT
GTATGAGGATAAAATTGTTCGGTAGTTATCTCCTGATAACATTTGTCATT
TGCCAAAAAAAATAGATTCAGCTATTGCCTTTATTTTGCAAATAACTACA
CCCTCGTCCTCTTGTAAACTATAGTACGTAAAGATTCAAAAAAAATTTTT
AAACCCCCTCAATGAATTCTAATCCCTCAAAATTACCCCAATATTTTGAA
ATGCAAATTGGAACCTTCGTCTTTCCTTTTTGTACACCTCTTTATTAACT
GGTTGAAGTAAAAGCCGGTCAATACAAGAAAATGCGCTATTTTGATTGGT
TCTCCATCGGTCAATATAATACGGTAAAAACCACTTCAGTTCTTTGGTCA
AACTGACGATGATTTTGAAAAGGGAAATTTGTTTTGTAGAAAAGTTTCGT
CAGTTTGAACATGATTTAAAAAACTGACGTTGCAATGACTTCTCATAAGT
AAGTGACGTCAGAATAAATCAAAGAAAATATTGGGTAAAAAAGAAACGAA
AAAATCATGGAAAATGAGTGGAAAATGCATTTTTTTGCCAGAAACACACA
AAAAATGTTCACCAGTTAATAAACACAATAATATAACTGTTTTCTCGGTC
AATACGGTAAAATATTGACCTTATCCTGCGCACAAACCTCGCAAGCTCGG
TCTGTACTTCGGCCGTGGTCAATATTTTACGGTATTGACCTCCAAACCAG
TTATTATTGTATTAGTAGTCATTGTTGAATAGAAATTCATGTTGTCTGAC
AAATTTTTGTTTCTAATCTCCAGCTTTTGCTGTGATCTGCGTTTCACCAA
TCGAGATGATTCGAACGAAGTTTCAATCCAAAAGTCGTCTTGGATATAAA
GAGATGTGTTCAATGATACTGTTCACAATCAAACAAGATGGTGTCTTCTC
TATGTGGAGAGGAGTTGGACCTACTCTACTCAGAGATGTACCATTTTCAG
GTAACTCACATAAAAAGATAAACACGTGGAAAGCAGTAATCAGGAAAGGA
TTTCAAAGGATTCAGGATATCTACCCATTCTCATGAAAGCCATTACACCA
AGATGGGTTATTATAAGTACAAACTTATGATGCTAATTCTTAAATATTTA
CGGATATGATGAAGCAGACCAGCAGACAAGATTTTTGCTGTGAGACAAAG
CAAAATTTCTCATACCCAATAAAGCATCAACATTTTGAGCTTTATATCCC
AAAACAAAATTTTTTGTACCTTCTAAACACCATAAACGCTATTTAATTGA
ATAAAAACAGGTTTAAAATTTAGTCTGCAAAAAAGAGAGGAGTCATGATC
CCCCCTCTGCCTTCTATACATAGCTTCAGCCAGGTTTCTAGCTCCCCCCA
ACAAAGTAAGGTCCCCCCAACAATTTAGCTCCCCCCAAAAAATTGCCTTG
TGCTAGGTCCCCTAATACTTAGTCAGCAAGATAAGCTAAAACAAAAACAT
TGTTCTCCCACCCCCCCGTAGAGAGAAATCAATAAAAAATATATGCAGGT
ACAGTCCTGATAAATGAAAACTAAATTTTACTTGCATTAATATTTATGTT
TACAAATCTTTTGCTTTTTATATTTGATTTAATAGTAGATAAGAGATCTT
TTGAAATTAGCTAAACAGCCCCCAGAGTCTCAGTCAGATCATCAACTCCC
CCCAACAATCTAGGTCCCCCCAAATATTTTGGTGATTTTAGCCCCCAGGC
TCTTTTAAGGCCGAAATATTTCTTAGCCCCCCCCCCCAAAAAAAAAAAGA
AAGGGGGGCTGAAGCTATGCATAGACAGGCCTCATATGACTCACTTAGTC
TATGGTTTGATTGAGAGATCAACGCATTAGCATCATGACCATCTTTCTTC
AATCTTCTTAAAAATAAAAATCTTTCTCTTGTTCTCCTCTTCTAGCATTA
TACTGGCTCAGTTATGAGAAGTTGAAATCACTCAATTCAGCACCAAACTT
TCTTTATTATTTCATGGCTGGTGCCTTGTCTGGAGTGGTAAGATTGGTTA
ACATTTTTCTCGCTAGCTATTGATATTTTTTATCCCAGAAATAAAGGGTT
ATAGTTTTTAGCATTACTGCAATCTGTAGTCATCTTTTGAAAGTCACATG
TTATAGTATTTTGATTAAAATATTGGTTTAGTCAGCTTTCTAAGGCATGT
GTCGTTTTTCGATACATTTTTAGCTTTGATCAAGTGTCTTAGGCATGAGT
CATTGCTAGATGCATTTAGTGTCATGTGTTTCTTTAGAAAGGAATGTAGT
TCTAAATATTTGTTTTCTTTTTTAGTTCAATTATTGAGTTTAAAAGAAAG
TCAACCATTAGTCTTTTCGATCACTTTCTCTCGACAGCCATTTCAACCAA
AGGCCTGACCTTATCTATTATTTTCAATGCATTTCTTATTACTCACGACC
TTGAATTTTTTATTTACATTTTAGGTCGCAGCAGTTGCAACGCAACCGTT
CGATGTGGTCAAAACATATCGTCAAATTGAATTAGGTGAAATCAAAGATG
GTAAGAACTTTTCAAACTTCGAAGAGACTATGTACCTTATCGGGGAAAAC
TTCGTCGGGGAAAATTTTCGTCGGGGGAAAATATTCGTCACTTGCTGGTA
GTTGGTAAGTACGCATTAAGGCCGGGGAAAATATTCGTCGGGGAAAGATA
TTCGTCACTTTTCCCCGAAGAAGTTTTCCCCGATAAGGTATGTATTGAAC
CTTCCCCGTTGAAACACAGATCAAACCGAAAAAAGGTTCAATCACGCCAC
TGCGCAAACTGCTAGAGGCCTCATCAGTAGTCCGGGTGCTTCAAAAACAT
CAAGATCTGAAGTGTCGTCATTTTTGTTAAAGACCATATCATAACATTTA
CCTGATCATTAAAAAATAAAGGAATCTAGCAAGCATTAAGGGGTTTTACT
TTTGTTCAGGCTCGACTGTTCTTACTTTTTTTGGCATTTTCAACTTCTTA
TTGTTTCTATCATTTTCTTATTTTAGTGCAAATAAAGGTTTTTTATCCTT
TTATGATACTTCTTCCCTTAAGCGCTTGAAATTTTCAGCCATTCAAGTTC
AGCATTGTTTCTAAATTGTTTCTATTTCTCGATGATTTGAGCCGCTCTCT
TCCTTTAAATTGTTCTTATTAATAAAAGATGGAATACGGATATTACGCTT
AATAACAGTCACAAAAAAGATGTAAAATTTACAAACGACATACCTTATTT
GTTCAGCATTTCCAGCATTTCAATAATTTCCAACATACTCTCCTTTAACC
CACATTGACATCATTCCATTAAATCATTTAAACTTACTACTTTTTCCTAC
TATGAACCAGAGAAATGAAAGGAAAAGAAAAAGTGCTTCTCTGAATACTC
AAATTGTTCTGATCGTTTCTATTGAAAACTCCTTTGTTTTGGTTTCAATT
AGGTAATTAAAATGATAATTAATATCTTTTGTAGAGATTGTTTAGTTGTT
TTTCTCTTGTTGAGCATAAATATGAACTAAAAGAGTAATAAACAAAACTT
TGAGAACATTTTGTTTGTTGTGTCTGATGATTGCTGCAGTTAAGCTGCTT
GTTTAGACCTCCCTTCAATTTTACTTTACTACATATACACTGTTTCATCA
TGATAAACGATCAGGTCATCGGACCTTTAGAGTCGTTGCTTTTCTATATA
CTAATAGTTGATTCACCGCAGAACTAATGGGAAATGTAGGTATTTGAATA
TATGGCTCGACGAACGGTGAATTTTGCCGGTCCAAGGCACGCAAAAAACT
CGTCGGTCTTAATGTTTGGTTTGCCGCTTCAATTTCTACATAATTCACGT
CAATCAACATACTGGGCTTGCTAAGAATTCGCCGGCTTATAGAATCTAGA
ATTTCTCAGAGTTAATTTTTCATTCGCCAGCCTATCAAAAAGAACAGTCG
ATAATTAATTGGTATAATCGCTCCTTTTGGTAAAACATCCAACAAGTAAT
TTTGAAGAAATCTCAAACAGCTTCTAAATTTTTTTCTTTTTTCTTATCTT
CAATTCTCACTATTTCTACAGTGTGATTTAGAAAAACCTTCTTCCCAATT
TTTCATTTTTCATTTCAAAAATGATAGTAATCAAGGTTTCTTGCACATGT
CTTATTTACATTTTCCTCTCATGAATCTCCCCCCTTTCTTTTCATTATAA
ATATGTGTACTTCATTTATTATTCTTTAGAGTATTTTGCGAAACGCCTCG
TTCACGTTTTAACAACTCTGTTCATTTTCATACGTGCTAATCTCAAAGTG
TTTTTTTAGTGTCTTTCACGAATTGAGTTACACAAGAGGATTTTCGACTG
GAGATTTTCGCCTGGAGATATTGTAAACTTCAGCTTCAACTTCAACAGAT
AGTATCTTCTGGAACGTTTTTCTCTAACATACATGTCTATCGAATTTTTG
TGTTTGTAATGGTTCGTACTGAGATAGATTTGCATTTACGGTTACACCNC
ATAATTCACGTCAATCAACATACTGGGCTTGCTAAGAATTCGCCGGCTTA
TAGAATCTAGAATTTCTCAGAGTTAATTTTTCATTCGCCAGCCTATCAAA
AAGAACAGTCGATAATTAATTGGTATAATCGCTCCTTTTGGTAAAACATC
CAACAAGTAATTTTGAAGAAATCTCAAACAGCTTCTAAATTTTTTTCTTT
TTTCTTATCTTCAATTCTCACTATTTCTACAGTGTGATTTAGAAAAACCT
TCTTCCCAATTTTTCATTTTTCATTTCAAAAATGATAGTAATCAAGGTTT
CTTGCACATGTCTTATTTACATTTTCCTCTCATGAATCTCCCCCCTTTCT
CTTCATTATAAATATGTGTACTTCATTTATTATTCTTTAGAGTATTTTGC
GAAACGCCTCATTCACGTTTTAACAATTCTGTTCATTTTCATACGTGCTA
ATCTCAAAGTGTTTTTTAGTGTCTTTCACGAATTGAGTTACACAAGGGGA
TTTTCGACTGGAGATTTTCGCCTGGAGATATTGTAAACTTCAGCTTCAAC
TTCAACAGATAGTATCTTCTGGAACGTTTTTCTCTAACATACATGTCTAT
CGAATTTTTGTGTTTGTAATGGTTCGTACTGAGATAGATTTGCATTTACG
GTTACACCGGTTACAACAAGTCGTTTTCGAGTTTTTAAGGTCTCCTTCTT
TACTAACCTAAACGGAGAATTATTGGTTCACGAGCGAGTTTTTACTTTGT
GAAAAACATGCAATATTTATCGAACTTTCGATTAATCGACAAATGGGTTT
CTTTTAGTACAGTTTATACCTCGCTCTTGTAGCGTATGTCAGGATCAACA
TTGATGGCGAAATCGATAGCGTTTTGGAAATCTATGCGAAGAATATCGGT
GTTAAATATTTAATAAAGTTTCCCTTTTTCGGAAAAATATAACGAAAAAG
CACCGAAACTAGTGACTCAGTAAATCAGTTTGCCTATAGTAAAGATCTCT
TTAAACAACATGTCGCCCAACTTCCATTCCCGCATCTCTTACTTTTAGTG
TCGTCAGCCAAAAAGCTGCCTTTCACATTCTCCATACTCAACGATTTACG
GAAAGTGCAAGGCTTGTCGAGTCTTTATACTGGTAAGTGGTGTCTATTTT
TCAACAAGTTGTATTACAATTATTTTTTACTAAACTTTAACCGTGCCCCG
TGTTTAGTACTAATTAAAATATATGAGCCCCGGCTTTACATTATTACGTA
GCCATAGATTTATGAAGCCCGAAAGGCTAGATGACGTGCTTTAAGCTCTT
CCAAGCGAAAAAAAGTGAATATCGCAAAAATATTTTTGCTATTGTTTTCG
AAAACCTGCGAAGCTTCTGATTGGTCAAGAGCTGAAATTCTATTGTAATG
TCACGTGACTTAGGTAGGATTTCCTACCTAACCTCGGCACACTTTTCAGC
AAAAGCACTCCATCTAGCCCTTCGGGCTTTTATAAATCTATGGTAGGCCC
CCTCACTTTTTTCACCATGTAGCTTATGATAATTGAAGAGTCGCCATATT
TTAAACAAGTACTTCCACGTCAGGCCGATTTGACCATAAAGTAGTTCCTA
ATAATAATGGTCATTGGTTCTTCTTTAGGCATGAATCCAAGGCTATTGAA
AGTAGCGCCAGCCTGTGCCATCATGATCAGCACTTATGAGTATGGTAAAA
GTTACTTTGCCAAGAAGAACGATGACAAAGATGTTGGATGAGGTACAATG
AAGTGATTAGCTACCATCGGTGTGTGAGTATATAAATCCGATGTTTACTC
GCTAGGATATTATACTTAGGTAGATTAGGTATCAGGGAGAATTGACCTAT
TCGCTATATGTATTACACCTATCACCTTATTGCAATAATTTAAGTTGAAA
ATGGTACACAAGAGATGGGATATTTACTATTACCGTATAGGAAGGAATGC
TTTGGTTTCACTATGGATATCAGATTTTGAGTGGCATTAACATATGGTAT
CATAAAACCAAAATCAAAATCAAATACTTTGAATCATTTAGAATGAATAA
TATTATACCCGCCATGACATACGAGGTGCAAAAATAATATAATTTTATTG
GTTTTGACTGATGGTATCCTTTGAAGTGTAATCAACCCAAGGGCTTTTAA
CCGTGCGCTCTGTGAAGGGGTTGAAATATGGTGCTTTTACGAACTTACTT
TTGACGAATTGTAAATTTTGCTGGTTATAAATATACACAATTATGGATAA
ACAGAGATAAAGAGTTCAAACATTTTATCAAAACTTTTATCTATCATGAT
TTGCCAATGCAAGGACTTACAAAAGATACACTGTCCCTAGTTCAGAAATG
CTGCGTTACCTTTACGTAAAATAAATGGCTTGAATACAATTAAAACTGCT
ATGCTGTTATTATTGGTTTGTAGCTCACAGACCATATAGTTGTGAAAGAA
TTTGACAATATTTACCTTGCATAGGAAGAAATTATTTTTGAAATTAATTG
ATAATTTATACCTTTATCCCCTTACCTTTCCCGCACAAGTCCGTAGGATT
ATTTCAAGACTTACGAAATAGCATTAATTCTGCCAGCCTTAAATCTTCAT
TTTACCGTTTGCTACTTGTGCTTTTATCTCAATAAACATTGTTCAGAAGT
GTTTAATTGGTCTGACCGTAAAAATAAAAAAGTATTTATTTTTGCATATT
GTTTCAGCTTAAGTTTAACTTCATTCTTCACCTTCATAGGCTACAATTTA
CAGTCGATGGGCTATTCGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040258XLOC_040258Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064211-exon-scaffold_41-1575043694:387816..387993TCONS_00064211-exon-scaffold_41-1575043694:387816..387993Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1575043694:387657..387710TCONS_00064211-exon-scaffold_41-1575043694:387657..387710Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1575043694:387311..387444TCONS_00064211-exon-scaffold_41-1575043694:387311..387444Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1575043694:386539..386606TCONS_00064211-exon-scaffold_41-1575043694:386539..386606Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1575043694:386131..386255TCONS_00064211-exon-scaffold_41-1575043694:386131..386255Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1575043694:385094..385270TCONS_00064211-exon-scaffold_41-1575043694:385094..385270Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1575043694:384057..384148TCONS_00064211-exon-scaffold_41-1575043694:384057..384148Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1575043694:383544..383619TCONS_00064211-exon-scaffold_41-1575043694:383544..383619Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1575043694:380462..380545TCONS_00064211-exon-scaffold_41-1575043694:380462..380545Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1575043694:379825..379965TCONS_00064211-exon-scaffold_41-1575043694:379825..379965Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1575043694:378824..379552TCONS_00064211-exon-scaffold_41-1575043694:378824..379552Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1510915933:387816..387993TCONS_00064211-exon-scaffold_41-1510915933:387816..387993Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1510915933:387657..387710TCONS_00064211-exon-scaffold_41-1510915933:387657..387710Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1510915933:387311..387444TCONS_00064211-exon-scaffold_41-1510915933:387311..387444Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1510915933:386539..386606TCONS_00064211-exon-scaffold_41-1510915933:386539..386606Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1510915933:386131..386255TCONS_00064211-exon-scaffold_41-1510915933:386131..386255Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1510915933:385094..385270TCONS_00064211-exon-scaffold_41-1510915933:385094..385270Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1510915933:384057..384148TCONS_00064211-exon-scaffold_41-1510915933:384057..384148Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1510915933:383544..383619TCONS_00064211-exon-scaffold_41-1510915933:383544..383619Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1510915933:380462..380545TCONS_00064211-exon-scaffold_41-1510915933:380462..380545Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1510915933:379825..379965TCONS_00064211-exon-scaffold_41-1510915933:379825..379965Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1510915933:378824..379552TCONS_00064211-exon-scaffold_41-1510915933:378824..379552Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1491911889:387816..387993TCONS_00064211-exon-scaffold_41-1491911889:387816..387993Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1491911889:387657..387710TCONS_00064211-exon-scaffold_41-1491911889:387657..387710Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1491911889:387311..387444TCONS_00064211-exon-scaffold_41-1491911889:387311..387444Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1491911889:386539..386606TCONS_00064211-exon-scaffold_41-1491911889:386539..386606Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1491911889:386131..386255TCONS_00064211-exon-scaffold_41-1491911889:386131..386255Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1491911889:385094..385270TCONS_00064211-exon-scaffold_41-1491911889:385094..385270Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1491911889:384057..384148TCONS_00064211-exon-scaffold_41-1491911889:384057..384148Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1491911889:383544..383619TCONS_00064211-exon-scaffold_41-1491911889:383544..383619Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1491911889:380462..380545TCONS_00064211-exon-scaffold_41-1491911889:380462..380545Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1491911889:379825..379965TCONS_00064211-exon-scaffold_41-1491911889:379825..379965Clytia hemisphaericaexon
TCONS_00064211-exon-scaffold_41-1491911889:378824..379552TCONS_00064211-exon-scaffold_41-1491911889:378824..379552Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_41supercontigscaffold_41:378824..387993 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.84691	1.05562	0.311972	0.0658757	0	0	0.617812	1.61158	0.0059695	2.87495	1.68372	1.34012	1.87082	6.05435e-05	1.51795	0.517112	4.4065	3.11195	0.0276894	1.84528	2.41663	3.5412	1.05791	4.40131	0.589642	0.320765	2.43472	0	2.51292	0.655936
Blast
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BLAST of TCONS_00064211 vs. Swiss-Prot (Human)
Match: S2540 (Solute carrier family 25 member 40 OS=Homo sapiens GN=SLC25A40 PE=1 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 5.792e-76
Identity = 144/333 (43.24%), Postives = 203/333 (60.96%), Query Frame = 1 
Query:  118 IQPSQQMISSSFGAVLVALFTTPFEVIKVRMQAQLKPTAV-KCSIFEN-VVDTLCYCT---TKPAFNSPVLCTIHSNIQTVPPFRSSTDAFIKIVQREGVFNLWKGLSATLVQMLPQTVIYYTAYDQMKVWLGFMEGKQNVSSTLVAGVTSRSFAVICVSPIEMIRTKFQSKSRLGYKEMCSMILFTIKQDGVFSMWRGVGPTLLRDVPFSALYWLSYEKL------KSLNSAPNFLYYFMAGALSGXXXXXXTQPFDVVKTYRQIELGEIKDVSSAKKLPF-TFSILNDLRKVQGLSSLYTGMNPRLLKVAPACAIMISTYEYGKSYFAKKN 1080
            + P QQM++S  GA+L ++  TP +V+K+R+QAQ  P    KC ++ N ++D LC C     K  +  P       N      F+ + DAF KI++ EG+ +LW GL  TLV  +P TVIY+T YDQ+   L    G+      +VAG+ +R  AV  +SP+E+IRTK QSK +  Y E+   +   + +DG  S+WRG  PT+LRDVPFSA+YW +YE L      KS    P F+  F +GALSG  AAVAT PFDVVKT +Q +L   +    +  L   T+ I+ ++    G S L++G+ PRL+K+APACAIMISTYE+GK++F K+N
Sbjct:   13 VTPLQQMLASCTGAILTSVIVTPLDVVKIRLQAQNNPLPKGKCFVYSNGLMDHLCVCEEGGNKLWYKKP------GN------FQGTLDAFFKIIRNEGIKSLWSGLPPTLVMAVPATVIYFTCYDQLSALLRSKLGENETCIPIVAGIVARFGAVTVISPLELIRTKMQSK-KFSYVELHRFVSKKVSEDGWISLWRGWAPTVLRDVPFSAMYWYNYEILKKWLCEKSGLYEPTFMINFTSGALSGSFAAVATLPFDVVKTQKQTQLWTYESHKISMPLHMSTWIIMKNIVAKNGFSGLFSGLIPRLIKIAPACAIMISTYEFGKAFFQKQN 332
The following BLAST results are available for this feature:
BLAST of TCONS_00064211 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S25405.792e-7643.24Solute carrier family 25 member 40 OS=Homo sapiens... [more]
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