TCONS_00064213 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064213
Unique NameTCONS_00064213
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2181

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064213 ID=TCONS_00064213|Name=TCONS_00064213|organism=Clytia hemisphaerica|type=transcript|length=2181bp
CTAGAGTTCACTTTATATTCAGTTTTAATCTAGGTGGAATTATCTAAAAA
GCTGGATTTTACTCATAAAAACTTCCATTagaaaattagagaaaaatgaa
aaagcaaataaaaaatcacCCATCGAAACTTGAAACCtaaaaaccatttc
aaaatgGCTTCAACAAATATTCAACCAAGCCAACAGATGATATCATCTTC
ATTTGGAGCTGTCTTGGTTGCTCTATTTACTACACCTTTTGAAGTTATCA
AGGTTCGAATGCAAGCACAACTAAAGCCAACAGctGTGAAATGTTCAATC
TTTGAGAATGTTGTAGATACACTTTGTTACTGCACCACAAAACCTGCTTT
TAATAGTCCTGTTCTCTGTACAATCCATAGTAATATTCAGACTGTACCGC
CGTTTAGATCAAGTACTGATGCTTTTATCAAGATTGTCCAAAGAGAAGGA
GTATTCAACTTATGGAAAGGATTGTCCGCTACATTAGTTCAGATGTTACC
TCAAACAGTGATTTACTATACAGCGTACGATCAAATGAAAGTTTGGTTAG
GCTTTATGGAAGGAAAACAAAATGTTTCCTCGACGCTTGTGGCAGGTGTA
ACCTCTAGATCTTTTGCTGTGATCTGCGTTTCACCAATCGAGATGATTCG
AACGAAGTTTCAATCCAAAAGTCGTCTTGGATATAAAGAGATGTGTTCAA
TGATACTGTTCACAATCAAACAAGATGGTGTCTTCTCTATGTGGAGAGGA
GTTGGACCTACTCTACTCAGAGATGTACCATTTTCAGCATTATACTGGCT
CAGTTATGAGAAGTTGAAATCACTCAATTCAGCACCAAACTTTCTTTATT
ATTTCATGGCTGGTGCCTTGTCTGGAGTGgTCGCAGCAGTTGCAACGCAA
CCGTTCGATGTGGTCAAAACATATCGTCAAATTGAATTAGGTGAAATCAA
AGATGTGTCGTCAGCCAAAAAGCTGCCTTTCACATTCTCCATACTCAACG
ATTTACGGAAAGTGCAAGGCTTGTCGAGTCTTTATACTGGCATGAATCCA
AGGCTATTGAAAGTAGCGCCAGCCTGTGCCATCATGATCAGCACTTATGA
GTATGGTAAAAGTTACTTTGCCAAGAAGAACGATGACAAAGATGTTGGAT
GAGGTACAATGAAGTGATTAGCTACCATCGGTGTGTGAGTATATAAATCC
GATGTTTACTCGCTAGGATATTATACTTAGGTAGATTAGGTATCAGGGAG
AATTGACCTATTCGCTATATGTATTACACCTATCACCTTATTGCAATAAT
TTAAGTTGAAAATGGTACACAAGAGATGGGATATTTACTATTACCGTATA
GGAAGGAATGCTTTGGTTTCACTATGGATATCAGATTTTGAGTGGCATTA
ACATATGGTATCATaaaaccaaaatcaaaatcaaatactTTGAATCATTT
AGAATGAATAATATTATACCCGCCATGACATACGAGGtgcaaaaataata
taattttattggttttgaCTGATGGTATCCTTTGAAGTGTAATCAACCCA
AGGGCTTTTAACCGTGCGCTCTGTGAAGGGGTTGAAATATGGTGCTTTTA
CGAACTTACTTTTGACGAATTGTAAATTTTGCTGGTTATAAATATACACA
ATTATGGATAAACAGAGATAAAGAGTTCAaacattttatcaaaactttta
tcTATCATGATTTGCCAATGCAAGGACTTACAAAAGATACACTGTCCCTA
GTTCAGAAATGCTGCGTTACCTTTACGTAAAATAAATGGCTTGAATACAA
TTAAAACTGCTATGCTGTTATTATTGGTTTGTAGCTCACAGACCATATAG
TTGTGAAAGAATTTGACAATATTTACCTTGCAtaggaagaaattattttt
gaaattaattgataatttatacCTTTATCCCCTTACCTTTCCCGCACAAG
TCCGTAGGATTATTTCAAGACTTACGAAATAGCATTAATTCTGCCAGCCT
TAAATCTTCATTTTACCGTTTGCTACTTGTGCTTTTATCTCAATAAACAT
TGTTCAGAAGTGTTTAATTGGTCTGAccgtaaaaataaaaaagtatttat
ttttgcatattgTTTCAGCTTAAGTTTAACTTCATTCTTCACCTTCATAG
GCTACAATTTACAGTCGATGGGctattcgag
Run BLAST on NCBI

transcript from alignment at scaffold_41:378824..388044-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064213 ID=TCONS_00064213|Name=TCONS_00064213|organism=Clytia hemisphaerica|type=transcript|length=9221bp|location=Sequence derived from alignment at scaffold_41:378824..388044- (Clytia hemisphaerica)
CTAGAGTTCACTTTATATTCAGTTTTAATCTAGGTGGAATTATCTAAAAA
GCTGGATTTTACTCATAAAAACTTCCATTAGAAAATTAGAGAAAAATGAA
AAAGCAAATAAAAAATCACCCATCGAAACTTGAAACCTAAAAACCATTTC
AAAATGGCTTCAACAAATATTCAACCAAGCCAACAGATGATATCATCTTC
ATTTGGAGCTGTCTTGGTTGCTCTATTTAGTAAGTTCTTATTATTTCAAA
GATTGTCGTAGTTATTAAAATTTTATAAAAGAAGAATATTTTTGTGAATT
GTACACTATGTTTCAACTCGGTTTGTCTTTTTAGCTACACCTTTTGAAGT
TATCAAGGTTCGAATGCAAGCACAACTAAAGCCAACAGGTAGAATTTTGT
ATGAAGTCACATTTATGCAATGTCAAAAACTCAATTCCTTATTTTATTAA
TATAACACTCGAAACTAAATAATTAATTTTAATTATTAGCTGTTTAATCA
GGACTAAAATTACCCCATGTATTAAAATCTATGTTAATTTGTTAGCATAA
AAGAAAGAATGGTTCCATCAAATACCCACTGACTTTTTGTTTATTTTTAG
CTGTGAAATGTTCAATCTTTGAGAATGTTGTAGATACACTTTGTTACTGC
ACCACAAAACCTGCTTTTAATAGTCCTGTTCTCTGTACAATCCATAGTAA
TATTCAGACTGTACCGCCGTTTAGATCAAGTACTGTAAGTATTATCGGTA
AATTCACAAAGAATCAGTTGTATCTTGCAGCTTTCTTAATATACAAATTA
TCTTTGCTTTCATGAACTGTAATATTCTTTCCTGGATAAATTCAAACTGG
CAATCATTGAAATCTACTGTCCTAACAAAGATGTTAGTTTTTTGTGAATG
ATATGTCAAAATCGCCATCTTTCATTTCTTCAATATAAAAGTTTCACCAA
TTTTAGCCATGGTGGCTCCAGCACTAAAGATCTGCTATAATACTATTTAT
TACCTTAAGTGGATAAATTTTGGCGGGGATTGCAAAATTTGCCAAATTAA
ATCCTCGCCAAAATTTCAAAATTCGGCAATTCGCCAAATCAAATCCCCGC
CAAATTTAACAAAAAGAGAATTATGTGAAAAATCACAACTTTTTAGTATA
ACTTTTAGTAATTTTCACCCATTTCAGTGTGATAAATTTCCAATTCGCCA
AATTAAATCCCCGCCAAATTTTACGAAATTGATCTTTCGCCAAATTAAAT
CCGCGCCAAAAATTGTATTTTGGCCAATCGCCAAATTAAATCCACGCCAA
AATCTATCCACTTAAGGTATTTTAAGAAGAAAGTTAAACAGGCTTTTTGT
CATGGGTTATTATTTCTAATAAAAATTATTTCGTTGAATACTTGGCTGCT
ACTACCCTCTTCAAAATTACAAATTATTATTCTTTCAGGATGCTTTTATC
AAGATTGTCCAAAGAGAAGGAGTATTCAACTTATGGAAAGGATTGTCCGC
TACATTGTAAGTCTAAAGCATGGCTCCCCTTAGTCCCCTTTAACAGTCTC
TGTTCATTGGCTGAAAGATTGGCTTTATCTGAAAGAGTTAACATTGAATT
TGAAGTGAAATAATGCTTAATATAATTGATTCTACTTGATTCGATTTCAC
TTAGCCAATGATCTTTTAAAGAATAAATCGAATCCAACCATTTCAAGAGA
AAAAGGTTTTTTTTATTTGATTGGGGTTGATTGGTCGATTGAACTAAAAA
GACGTCAAAACTTTAAAAAATGTTGTTTTGTTATATTAGAGTTCAGATGT
TACCTCAAACAGTGATTTACTATACAGCGTACGATCAAATGAAAGTTTGG
TTAGGCTTTATGGAAGGAAAACAAAATGTTTCCTCGACGCTTGTGGCAGG
TGTAACCTCTAGATGTAAGTCTTATATGTTTCTCTGGGCAGTTTTCTCTA
TTAGTGGCACCCCCAATCTCTTATTCAGATTGGAGGGGTACTGCCCATTA
TGTATGAGGATAAAATTGTTCGGTAGTTATCTCCTGATAACATTTGTCAT
TTGCCAAAAAAAATAGATTCAGCTATTGCCTTTATTTTGCAAATAACTAC
ACCCTCGTCCTCTTGTAAACTATAGTACGTAAAGATTCAAAAAAAATTTT
TAAACCCCCTCAATGAATTCTAATCCCTCAAAATTACCCCAATATTTTGA
AATGCAAATTGGAACCTTCGTCTTTCCTTTTTGTACACCTCTTTATTAAC
TGGTTGAAGTAAAAGCCGGTCAATACAAGAAAATGCGCTATTTTGATTGG
TTCTCCATCGGTCAATATAATACGGTAAAAACCACTTCAGTTCTTTGGTC
AAACTGACGATGATTTTGAAAAGGGAAATTTGTTTTGTAGAAAAGTTTCG
TCAGTTTGAACATGATTTAAAAAACTGACGTTGCAATGACTTCTCATAAG
TAAGTGACGTCAGAATAAATCAAAGAAAATATTGGGTAAAAAAGAAACGA
AAAAATCATGGAAAATGAGTGGAAAATGCATTTTTTTGCCAGAAACACAC
AAAAAATGTTCACCAGTTAATAAACACAATAATATAACTGTTTTCTCGGT
CAATACGGTAAAATATTGACCTTATCCTGCGCACAAACCTCGCAAGCTCG
GTCTGTACTTCGGCCGTGGTCAATATTTTACGGTATTGACCTCCAAACCA
GTTATTATTGTATTAGTAGTCATTGTTGAATAGAAATTCATGTTGTCTGA
CAAATTTTTGTTTCTAATCTCCAGCTTTTGCTGTGATCTGCGTTTCACCA
ATCGAGATGATTCGAACGAAGTTTCAATCCAAAAGTCGTCTTGGATATAA
AGAGATGTGTTCAATGATACTGTTCACAATCAAACAAGATGGTGTCTTCT
CTATGTGGAGAGGAGTTGGACCTACTCTACTCAGAGATGTACCATTTTCA
GGTAACTCACATAAAAAGATAAACACGTGGAAAGCAGTAATCAGGAAAGG
ATTTCAAAGGATTCAGGATATCTACCCATTCTCATGAAAGCCATTACACC
AAGATGGGTTATTATAAGTACAAACTTATGATGCTAATTCTTAAATATTT
ACGGATATGATGAAGCAGACCAGCAGACAAGATTTTTGCTGTGAGACAAA
GCAAAATTTCTCATACCCAATAAAGCATCAACATTTTGAGCTTTATATCC
CAAAACAAAATTTTTTGTACCTTCTAAACACCATAAACGCTATTTAATTG
AATAAAAACAGGTTTAAAATTTAGTCTGCAAAAAAGAGAGGAGTCATGAT
CCCCCCTCTGCCTTCTATACATAGCTTCAGCCAGGTTTCTAGCTCCCCCC
AACAAAGTAAGGTCCCCCCAACAATTTAGCTCCCCCCAAAAAATTGCCTT
GTGCTAGGTCCCCTAATACTTAGTCAGCAAGATAAGCTAAAACAAAAACA
TTGTTCTCCCACCCCCCCGTAGAGAGAAATCAATAAAAAATATATGCAGG
TACAGTCCTGATAAATGAAAACTAAATTTTACTTGCATTAATATTTATGT
TTACAAATCTTTTGCTTTTTATATTTGATTTAATAGTAGATAAGAGATCT
TTTGAAATTAGCTAAACAGCCCCCAGAGTCTCAGTCAGATCATCAACTCC
CCCCAACAATCTAGGTCCCCCCAAATATTTTGGTGATTTTAGCCCCCAGG
CTCTTTTAAGGCCGAAATATTTCTTAGCCCCCCCCCCCAAAAAAAAAAAG
AAAGGGGGGCTGAAGCTATGCATAGACAGGCCTCATATGACTCACTTAGT
CTATGGTTTGATTGAGAGATCAACGCATTAGCATCATGACCATCTTTCTT
CAATCTTCTTAAAAATAAAAATCTTTCTCTTGTTCTCCTCTTCTAGCATT
ATACTGGCTCAGTTATGAGAAGTTGAAATCACTCAATTCAGCACCAAACT
TTCTTTATTATTTCATGGCTGGTGCCTTGTCTGGAGTGGTAAGATTGGTT
AACATTTTTCTCGCTAGCTATTGATATTTTTTATCCCAGAAATAAAGGGT
TATAGTTTTTAGCATTACTGCAATCTGTAGTCATCTTTTGAAAGTCACAT
GTTATAGTATTTTGATTAAAATATTGGTTTAGTCAGCTTTCTAAGGCATG
TGTCGTTTTTCGATACATTTTTAGCTTTGATCAAGTGTCTTAGGCATGAG
TCATTGCTAGATGCATTTAGTGTCATGTGTTTCTTTAGAAAGGAATGTAG
TTCTAAATATTTGTTTTCTTTTTTAGTTCAATTATTGAGTTTAAAAGAAA
GTCAACCATTAGTCTTTTCGATCACTTTCTCTCGACAGCCATTTCAACCA
AAGGCCTGACCTTATCTATTATTTTCAATGCATTTCTTATTACTCACGAC
CTTGAATTTTTTATTTACATTTTAGGTCGCAGCAGTTGCAACGCAACCGT
TCGATGTGGTCAAAACATATCGTCAAATTGAATTAGGTGAAATCAAAGAT
GGTAAGAACTTTTCAAACTTCGAAGAGACTATGTACCTTATCGGGGAAAA
CTTCGTCGGGGAAAATTTTCGTCGGGGGAAAATATTCGTCACTTGCTGGT
AGTTGGTAAGTACGCATTAAGGCCGGGGAAAATATTCGTCGGGGAAAGAT
ATTCGTCACTTTTCCCCGAAGAAGTTTTCCCCGATAAGGTATGTATTGAA
CCTTCCCCGTTGAAACACAGATCAAACCGAAAAAAGGTTCAATCACGCCA
CTGCGCAAACTGCTAGAGGCCTCATCAGTAGTCCGGGTGCTTCAAAAACA
TCAAGATCTGAAGTGTCGTCATTTTTGTTAAAGACCATATCATAACATTT
ACCTGATCATTAAAAAATAAAGGAATCTAGCAAGCATTAAGGGGTTTTAC
TTTTGTTCAGGCTCGACTGTTCTTACTTTTTTTGGCATTTTCAACTTCTT
ATTGTTTCTATCATTTTCTTATTTTAGTGCAAATAAAGGTTTTTTATCCT
TTTATGATACTTCTTCCCTTAAGCGCTTGAAATTTTCAGCCATTCAAGTT
CAGCATTGTTTCTAAATTGTTTCTATTTCTCGATGATTTGAGCCGCTCTC
TTCCTTTAAATTGTTCTTATTAATAAAAGATGGAATACGGATATTACGCT
TAATAACAGTCACAAAAAAGATGTAAAATTTACAAACGACATACCTTATT
TGTTCAGCATTTCCAGCATTTCAATAATTTCCAACATACTCTCCTTTAAC
CCACATTGACATCATTCCATTAAATCATTTAAACTTACTACTTTTTCCTA
CTATGAACCAGAGAAATGAAAGGAAAAGAAAAAGTGCTTCTCTGAATACT
CAAATTGTTCTGATCGTTTCTATTGAAAACTCCTTTGTTTTGGTTTCAAT
TAGGTAATTAAAATGATAATTAATATCTTTTGTAGAGATTGTTTAGTTGT
TTTTCTCTTGTTGAGCATAAATATGAACTAAAAGAGTAATAAACAAAACT
TTGAGAACATTTTGTTTGTTGTGTCTGATGATTGCTGCAGTTAAGCTGCT
TGTTTAGACCTCCCTTCAATTTTACTTTACTACATATACACTGTTTCATC
ATGATAAACGATCAGGTCATCGGACCTTTAGAGTCGTTGCTTTTCTATAT
ACTAATAGTTGATTCACCGCAGAACTAATGGGAAATGTAGGTATTTGAAT
ATATGGCTCGACGAACGGTGAATTTTGCCGGTCCAAGGCACGCAAAAAAC
TCGTCGGTCTTAATGTTTGGTTTGCCGCTTCAATTTCTACATAATTCACG
TCAATCAACATACTGGGCTTGCTAAGAATTCGCCGGCTTATAGAATCTAG
AATTTCTCAGAGTTAATTTTTCATTCGCCAGCCTATCAAAAAGAACAGTC
GATAATTAATTGGTATAATCGCTCCTTTTGGTAAAACATCCAACAAGTAA
TTTTGAAGAAATCTCAAACAGCTTCTAAATTTTTTTCTTTTTTCTTATCT
TCAATTCTCACTATTTCTACAGTGTGATTTAGAAAAACCTTCTTCCCAAT
TTTTCATTTTTCATTTCAAAAATGATAGTAATCAAGGTTTCTTGCACATG
TCTTATTTACATTTTCCTCTCATGAATCTCCCCCCTTTCTTTTCATTATA
AATATGTGTACTTCATTTATTATTCTTTAGAGTATTTTGCGAAACGCCTC
GTTCACGTTTTAACAACTCTGTTCATTTTCATACGTGCTAATCTCAAAGT
GTTTTTTTAGTGTCTTTCACGAATTGAGTTACACAAGAGGATTTTCGACT
GGAGATTTTCGCCTGGAGATATTGTAAACTTCAGCTTCAACTTCAACAGA
TAGTATCTTCTGGAACGTTTTTCTCTAACATACATGTCTATCGAATTTTT
GTGTTTGTAATGGTTCGTACTGAGATAGATTTGCATTTACGGTTACACCN
CATAATTCACGTCAATCAACATACTGGGCTTGCTAAGAATTCGCCGGCTT
ATAGAATCTAGAATTTCTCAGAGTTAATTTTTCATTCGCCAGCCTATCAA
AAAGAACAGTCGATAATTAATTGGTATAATCGCTCCTTTTGGTAAAACAT
CCAACAAGTAATTTTGAAGAAATCTCAAACAGCTTCTAAATTTTTTTCTT
TTTTCTTATCTTCAATTCTCACTATTTCTACAGTGTGATTTAGAAAAACC
TTCTTCCCAATTTTTCATTTTTCATTTCAAAAATGATAGTAATCAAGGTT
TCTTGCACATGTCTTATTTACATTTTCCTCTCATGAATCTCCCCCCTTTC
TCTTCATTATAAATATGTGTACTTCATTTATTATTCTTTAGAGTATTTTG
CGAAACGCCTCATTCACGTTTTAACAATTCTGTTCATTTTCATACGTGCT
AATCTCAAAGTGTTTTTTAGTGTCTTTCACGAATTGAGTTACACAAGGGG
ATTTTCGACTGGAGATTTTCGCCTGGAGATATTGTAAACTTCAGCTTCAA
CTTCAACAGATAGTATCTTCTGGAACGTTTTTCTCTAACATACATGTCTA
TCGAATTTTTGTGTTTGTAATGGTTCGTACTGAGATAGATTTGCATTTAC
GGTTACACCGGTTACAACAAGTCGTTTTCGAGTTTTTAAGGTCTCCTTCT
TTACTAACCTAAACGGAGAATTATTGGTTCACGAGCGAGTTTTTACTTTG
TGAAAAACATGCAATATTTATCGAACTTTCGATTAATCGACAAATGGGTT
TCTTTTAGTACAGTTTATACCTCGCTCTTGTAGCGTATGTCAGGATCAAC
ATTGATGGCGAAATCGATAGCGTTTTGGAAATCTATGCGAAGAATATCGG
TGTTAAATATTTAATAAAGTTTCCCTTTTTCGGAAAAATATAACGAAAAA
GCACCGAAACTAGTGACTCAGTAAATCAGTTTGCCTATAGTAAAGATCTC
TTTAAACAACATGTCGCCCAACTTCCATTCCCGCATCTCTTACTTTTAGT
GTCGTCAGCCAAAAAGCTGCCTTTCACATTCTCCATACTCAACGATTTAC
GGAAAGTGCAAGGCTTGTCGAGTCTTTATACTGGTAAGTGGTGTCTATTT
TTCAACAAGTTGTATTACAATTATTTTTTACTAAACTTTAACCGTGCCCC
GTGTTTAGTACTAATTAAAATATATGAGCCCCGGCTTTACATTATTACGT
AGCCATAGATTTATGAAGCCCGAAAGGCTAGATGACGTGCTTTAAGCTCT
TCCAAGCGAAAAAAAGTGAATATCGCAAAAATATTTTTGCTATTGTTTTC
GAAAACCTGCGAAGCTTCTGATTGGTCAAGAGCTGAAATTCTATTGTAAT
GTCACGTGACTTAGGTAGGATTTCCTACCTAACCTCGGCACACTTTTCAG
CAAAAGCACTCCATCTAGCCCTTCGGGCTTTTATAAATCTATGGTAGGCC
CCCTCACTTTTTTCACCATGTAGCTTATGATAATTGAAGAGTCGCCATAT
TTTAAACAAGTACTTCCACGTCAGGCCGATTTGACCATAAAGTAGTTCCT
AATAATAATGGTCATTGGTTCTTCTTTAGGCATGAATCCAAGGCTATTGA
AAGTAGCGCCAGCCTGTGCCATCATGATCAGCACTTATGAGTATGGTAAA
AGTTACTTTGCCAAGAAGAACGATGACAAAGATGTTGGATGAGGTACAAT
GAAGTGATTAGCTACCATCGGTGTGTGAGTATATAAATCCGATGTTTACT
CGCTAGGATATTATACTTAGGTAGATTAGGTATCAGGGAGAATTGACCTA
TTCGCTATATGTATTACACCTATCACCTTATTGCAATAATTTAAGTTGAA
AATGGTACACAAGAGATGGGATATTTACTATTACCGTATAGGAAGGAATG
CTTTGGTTTCACTATGGATATCAGATTTTGAGTGGCATTAACATATGGTA
TCATAAAACCAAAATCAAAATCAAATACTTTGAATCATTTAGAATGAATA
ATATTATACCCGCCATGACATACGAGGTGCAAAAATAATATAATTTTATT
GGTTTTGACTGATGGTATCCTTTGAAGTGTAATCAACCCAAGGGCTTTTA
ACCGTGCGCTCTGTGAAGGGGTTGAAATATGGTGCTTTTACGAACTTACT
TTTGACGAATTGTAAATTTTGCTGGTTATAAATATACACAATTATGGATA
AACAGAGATAAAGAGTTCAAACATTTTATCAAAACTTTTATCTATCATGA
TTTGCCAATGCAAGGACTTACAAAAGATACACTGTCCCTAGTTCAGAAAT
GCTGCGTTACCTTTACGTAAAATAAATGGCTTGAATACAATTAAAACTGC
TATGCTGTTATTATTGGTTTGTAGCTCACAGACCATATAGTTGTGAAAGA
ATTTGACAATATTTACCTTGCATAGGAAGAAATTATTTTTGAAATTAATT
GATAATTTATACCTTTATCCCCTTACCTTTCCCGCACAAGTCCGTAGGAT
TATTTCAAGACTTACGAAATAGCATTAATTCTGCCAGCCTTAAATCTTCA
TTTTACCGTTTGCTACTTGTGCTTTTATCTCAATAAACATTGTTCAGAAG
TGTTTAATTGGTCTGACCGTAAAAATAAAAAAGTATTTATTTTTGCATAT
TGTTTCAGCTTAAGTTTAACTTCATTCTTCACCTTCATAGGCTACAATTT
ACAGTCGATGGGCTATTCGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040258XLOC_040258Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064213-exon-scaffold_41-1575043694:387816..388044TCONS_00064213-exon-scaffold_41-1575043694:387816..388044Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1575043694:387657..387710TCONS_00064213-exon-scaffold_41-1575043694:387657..387710Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1575043694:387311..387444TCONS_00064213-exon-scaffold_41-1575043694:387311..387444Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1575043694:386539..386606TCONS_00064213-exon-scaffold_41-1575043694:386539..386606Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1575043694:386131..386255TCONS_00064213-exon-scaffold_41-1575043694:386131..386255Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1575043694:385094..385270TCONS_00064213-exon-scaffold_41-1575043694:385094..385270Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1575043694:384057..384148TCONS_00064213-exon-scaffold_41-1575043694:384057..384148Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1575043694:383544..383619TCONS_00064213-exon-scaffold_41-1575043694:383544..383619Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1575043694:380462..380545TCONS_00064213-exon-scaffold_41-1575043694:380462..380545Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1575043694:378824..379965TCONS_00064213-exon-scaffold_41-1575043694:378824..379965Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1510915933:387816..388044TCONS_00064213-exon-scaffold_41-1510915933:387816..388044Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1510915933:387657..387710TCONS_00064213-exon-scaffold_41-1510915933:387657..387710Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1510915933:387311..387444TCONS_00064213-exon-scaffold_41-1510915933:387311..387444Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1510915933:386539..386606TCONS_00064213-exon-scaffold_41-1510915933:386539..386606Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1510915933:386131..386255TCONS_00064213-exon-scaffold_41-1510915933:386131..386255Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1510915933:385094..385270TCONS_00064213-exon-scaffold_41-1510915933:385094..385270Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1510915933:384057..384148TCONS_00064213-exon-scaffold_41-1510915933:384057..384148Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1510915933:383544..383619TCONS_00064213-exon-scaffold_41-1510915933:383544..383619Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1510915933:380462..380545TCONS_00064213-exon-scaffold_41-1510915933:380462..380545Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1510915933:378824..379965TCONS_00064213-exon-scaffold_41-1510915933:378824..379965Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1491911889:387816..388044TCONS_00064213-exon-scaffold_41-1491911889:387816..388044Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1491911889:387657..387710TCONS_00064213-exon-scaffold_41-1491911889:387657..387710Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1491911889:387311..387444TCONS_00064213-exon-scaffold_41-1491911889:387311..387444Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1491911889:386539..386606TCONS_00064213-exon-scaffold_41-1491911889:386539..386606Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1491911889:386131..386255TCONS_00064213-exon-scaffold_41-1491911889:386131..386255Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1491911889:385094..385270TCONS_00064213-exon-scaffold_41-1491911889:385094..385270Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1491911889:384057..384148TCONS_00064213-exon-scaffold_41-1491911889:384057..384148Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1491911889:383544..383619TCONS_00064213-exon-scaffold_41-1491911889:383544..383619Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1491911889:380462..380545TCONS_00064213-exon-scaffold_41-1491911889:380462..380545Clytia hemisphaericaexon
TCONS_00064213-exon-scaffold_41-1491911889:378824..379965TCONS_00064213-exon-scaffold_41-1491911889:378824..379965Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_41supercontigscaffold_41:378824..388044 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.61562	5.25152	1.99079	1.21766	21.4582	16.4413	12.5287	10.213	6.37309	7.71764	8.46349	5.91515	6.13662	4.60887	5.11638	6.62681	7.50725	7.60945	3.0356	4.40067	15.5121	14.7715	13.2311	10.6521	10.6136	13.1833	3.46558	5.31811	8.41625	9.4482
Blast
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BLAST of TCONS_00064213 vs. Swiss-Prot (Human)
Match: S2540 (Solute carrier family 25 member 40 OS=Homo sapiens GN=SLC25A40 PE=1 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 4.631e-75
Identity = 144/333 (43.24%), Postives = 203/333 (60.96%), Query Frame = 1 
Query:  169 IQPSQQMISSSFGAVLVALFTTPFEVIKVRMQAQLKPTAV-KCSIFEN-VVDTLCYCT---TKPAFNSPVLCTIHSNIQTVPPFRSSTDAFIKIVQREGVFNLWKGLSATLVQMLPQTVIYYTAYDQMKVWLGFMEGKQNVSSTLVAGVTSRSFAVICVSPIEMIRTKFQSKSRLGYKEMCSMILFTIKQDGVFSMWRGVGPTLLRDVPFSALYWLSYEKL------KSLNSAPNFLYYFMAGALSGXXXXXXTQPFDVVKTYRQIELGEIKDVSSAKKLPF-TFSILNDLRKVQGLSSLYTGMNPRLLKVAPACAIMISTYEYGKSYFAKKN 1131
            + P QQM++S  GA+L ++  TP +V+K+R+QAQ  P    KC ++ N ++D LC C     K  +  P       N      F+ + DAF KI++ EG+ +LW GL  TLV  +P TVIY+T YDQ+   L    G+      +VAG+ +R  AV  +SP+E+IRTK QSK +  Y E+   +   + +DG  S+WRG  PT+LRDVPFSA+YW +YE L      KS    P F+  F +GALSG  AAVAT PFDVVKT +Q +L   +    +  L   T+ I+ ++    G S L++G+ PRL+K+APACAIMISTYE+GK++F K+N
Sbjct:   13 VTPLQQMLASCTGAILTSVIVTPLDVVKIRLQAQNNPLPKGKCFVYSNGLMDHLCVCEEGGNKLWYKKP------GN------FQGTLDAFFKIIRNEGIKSLWSGLPPTLVMAVPATVIYFTCYDQLSALLRSKLGENETCIPIVAGIVARFGAVTVISPLELIRTKMQSK-KFSYVELHRFVSKKVSEDGWISLWRGWAPTVLRDVPFSAMYWYNYEILKKWLCEKSGLYEPTFMINFTSGALSGSFAAVATLPFDVVKTQKQTQLWTYESHKISMPLHMSTWIIMKNIVAKNGFSGLFSGLIPRLIKIAPACAIMISTYEFGKAFFQKQN 332
The following BLAST results are available for this feature:
BLAST of TCONS_00064213 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S25404.631e-7543.24Solute carrier family 25 member 40 OS=Homo sapiens... [more]
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