TCONS_00064299 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00064299
Unique Name	TCONS_00064299
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	4635

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_410:40264..48202+

transcript sequence

>TCONS_00064299 ID=TCONS_00064299|Name=TCONS_00064299|organism=Clytia hemisphaerica|type=transcript|length=4635bp
ACAAAGAGCCACCTGCACCGACCAAGAGACGCGACGTGAACATAATTGAA
CTGATCTTTCCTTCCGATCTTCTTCCGTCCAACATTTGTATTGAAAGTGG
TGAAAATAGTGAagacaaaatttctgaaaatatcaaAGGGCGTTCGATTG
AAGCCATCGTTAAAACGGGCCAATCAAGTGAAAGCATGActgaaattaac
caatcagatGGTAGACTTGAAACTTTAAACCAATCAAAAGCTAGTGGTTT
GaatttgaaccaatcagagGATAGCAAGGCCAAAACTAGCCAATCAAGCA
TATCTGATGTTACAACAACTGACAAATCAGATGAAACTGTCCTAAAGCTT
GATCACTTCAAGATAATCTCttcaaaccaatcaaatcaaacTCTTTCAAA
gcccaaccaatcagaaaggaCCGAGATCTTaaacagccaatcagaagaaA
CCAAGCTTTTaaacagccaatcagaagagaccAAGCTTTTaaacagccaa
tcagaagagaccAAGCTTTTtaacagccaatcagaagagaccAAGCTTTT
aaacagccaatcagaagagaccGAGATCTTaaacagccaatcagaagaga
ccAAGCTTTTaaacagccaatcagaagagaccGAGATCTTAAACATCCCA
TCAGAAGCAGAGATGATTACAAATGTGCACCAATCAGAAGAAATTCTCCT
CAATTTCAGCCTATCGAATGGAAAAGAAAGTGCTGAAAATCAAATACAAC
CAGGATCTGAAAATGCAACCCATGAAGAAATAAAGGTCGCGCCTACCCAG
GTTACTCCTGAGTATCTGACAGCGCAATGCATTATTGTTTGCCAATCACA
TCCAGAATGCATTTCACTGATATCTGAACTTGAAACATATTTCCAGGATA
ACAATAGCATCGTTCTCCAACATATGGCAAACGGCAATCAATCTAAACAA
GAAATATTGGAACCGCAAAGGATTCTGGTTATTCTCATGTCACTGGATAC
GTTTTTGCAAATCAAACCTCATTCTATTGAATGTGTTTTGTTTAACGCAC
GTGTGAATGATTTGAGGATGTATGAAACGGTCAAAAGTATCTTACTGAGA
ATGAATCCTTTAAAAGTTGTACACGTCAAATGTCATGAGAATGAGGTTTA
TTCGCAACATTTATGGAACGTTTTATCAAAAGAATATCTGGCTCCACCTT
TCTCGATGGATCATCGATCCTTGTACAGACTTTGTGGAATGTATTCCTCG
TCCATGTACAGTAAGGTAGACGTCGAAGTTGAACGTAAACCTGATATCGA
AAGTGAAAGTGGTTCCCAGACTCTTATCTATATGCCGATGAGATCAACAA
TCAAAGCCATTGCCAAGAGTGATCCATCGGTGTCGAAAACTGATGAATCA
GCATTACGTCATGCAATCAAGTTGCTGAAAGAGAATCGTGAATTGGACAA
CAAGGGAGATGTCTTGAAAAGAATTGAAGCACCTTCGAATTGTCaagaaa
tgaaagaatttttcgTACCTCGAATCATGGATGAGAAGGAGGAATTAACA
GAACCAATCAAATCTCTTTGCCATGGGCAGCCATTGTACGTGTATCGGAT
GAGGTTCGCGGAGATGACTTCTAGAGAAGGTGACGTGTCGACCAGTTTTA
AAGGAATCAACACCGTTGGATTAATATCAACTATCAAAATACCTAAGTTT
GAAGAAACGTTTTACGATCATTACGGCTCAGTCAATGTTGTTTTGACGGA
TGACTTTCAGACCATACTCACCGAAGACGATTTCCAGATAGTTCAAAACT
TCAAAagagatattttcaaaaatatctacAATCTATTGCCTAATGATGAT
TCCCTCGTGTCTACAAAATATGCAATTGTAATGCTGCACCCAAATGAAGA
TTCCCTGgattttgaaattatgcatCAAACAACAGCTTACTTTGACTCTC
TNCTACAAAATATGCAATTGTAATGCTGCACCCAAATGAAGATTCCCTGg
attttgaaattatgcatCAAACAACAGCTTACTTTGACTCTCTCATCAAA
GACGTTGACACTCGAAAAATATTCACGAACACTTTACCGGTAGCCGAAAC
TATCATTTTAGCGGTCCATACTTTACCAAAGATCAGTGCACCAATGTTAG
TGCAAAAACTTCCTCAAAACACCGCACATAAATCTGTATTAGACGAATTT
CCTGATCAAGAAAAAGCTCCAACTTTCCTTGCTTACTTCAATTCGAAATA
TGATGTCAATATCTTAGAGAGTGAATCCATGGTTCCTGTCAAACATTTAA
AAACGGTTTTAAACTCGATAAACACGATCGATTATGCAAAACGACGCAAA
AGTAAAAGCAAACCGAACGAATTGCCCCAGTCTCTTTGTTACTTGTACCC
ATTCTCCTTTCCAATATGGCGGATTATCTGCGTGTTTCCATCTTTAGTGT
ATTATCTGAAGCAGTACGAAAATGCGAAATCAGTGTTGAGCATTTTGAAT
GAATTCAAACTGATCCAAGAAAAATACGAAGAAAATTTGTCACGTTGTAG
TCCCTTGGATCTTTGTGCGAAAGATAGCGGAGTTGTTTCGGACATTCACC
NCTGATCCAAGAAAAATACGAAGAAAATTTGTCACGTTGTAGTCCCTTGG
ATCTTTGTGCGAAAGATAGCGGAGTTGTTTCGGACATTCACCAAGAACAC
TTAATTGTTTCAAAAGGGCAGTCCCTCGTTAAGGAGGAGAATCGTCAAAA
TGATTCGTCAATATCTGAAGAAGCAGTGTTTGCAATTACCAATAAAAGCG
ATcttgaaaatcgggaaaacattcaaaaaatcgGAAGCTTGACCAATGGA
GCTCCATCGGCCCTTCATCTTGCAGAGCAGAACCAGATGAACCTACTTCT
GTCCGATAATCAAACGTTGGAGGATTCATGTCTGGCAATTGAAGAACTTA
AATCGATATCCGAAGATACCAATAAATCTGCGAAATATCCATCCAAAAAA
CATCCGATCCCTGATAATCAATCTCATGATATATGCAATGGTAAAACAAC
TTTGGGAAATGTAGCTATGACAGAAATTCCTGGAATTGATGACTTATCGA
GCTGGTCTAACTTTGACGAAAACGGGTGTCATCAAACTCCTATCCAAGAC
ATTGTAGATTCATCTGAGAATCCAGATCTTGTAAATCGAGTTCGAAAAGC
TCTCATCTCTAACTCAGCAACCGAAAACATTTCGAATGAGATTTTCGAAT
ATTTTGGTGATTCAGTTCTCAAATATGTTATAACAATCAATTTGTTTTTG
ACACGCCCAGATTTCAATGAGAATTCGTTAAACTTCTTTAAATCACAACT
TGTAAGTAACGAACTGCTTTACAGAATTGGGTTATCGAGGCAATTACGAA
GATTTCTCTTCTATGACAGGTTTGAGCCATCGGACTTAAAATCCTACATG
TTCAATGATGTTACCTCCGTCTCGCAGACTGAAACGAGTGAATCCTCCGC
ATCACAGATTGGATCGATTGATGAGGAACTCACCACTACCAATTCTTCGC
ATTTTGAATCTAAGCTATTTCCCATTAACCAAAGCAACAATACCGCTACA
TCCGTTTCACAGATTGAATCTAATGACTCTGGTAATCATAGCAATAAAGC
AATATCAGATATGACAGAAGCTCTCATTGGTGCGCTGTTCACACAAAATC
ATGATGTCAACCCGCTATGGCTCAATTTTCTCGAATGGCTAGGTTACAAA
CTGACTAATTTTCGCCGTCTTTTATCAACTGGTCATTATCAATCCAGCCC
ATGTGACGTTCCTAGTGGAAATAGCACCTTATCTTATTCACAGCAATATT
CTTCCTTCGTCCATCCAGATATTTTAGGACATGTAAACAAAGCTTTAACC
CAGCCACCACCACCGTCATACCTTACGACCGGTTTACATCAACTGGAAGA
ATCTCTTGGTTATAAATTCAAGAACAAATTGCTACCGATTGAAGGCCAGT
GTCATGCTTCATTTGCAGGCCGACTTAACCCGTGGACGAACTCTAATCAA
CGGCTAGAATTTATCGGAGACGCTATTTTGGAACTTATGGTGACGTCAGA
ATTGATTCGAAGGAATGAAAAAGATTCACTCTCGTTTGACCAAGGATCCC
TATCTAACATCAGAAGTGCAATTGTTTGTACGCGTACTCTTGCTGTCGTG
GCCGCACGTCTTCAACTTCATGGAGGTTTGAAGATATTGGATTTACCGAC
TAAGATATTGATCGATGATTTTGTGGAAGCTCTCGAAGGACTGGGAACTA
AATTTGATGAGGACTTTTACGAAGCCAACGTAATAAAAGCACCGTCAGAC
GATAGATTTGCTGGTGCGATTCTCGAGATACCAAAAGATCTTGCGGATTG
TACGGAGGCTGTTATCGGTGCCGTGTATTTGGACACCGGTGGTAACCTTC
AGGAGACTTGGTCTATCTTTGAGCCACATTTCGCTGATGTTATTGatttt
tacgtGACCCGATCACCTCCCTCAATCTATATTTATGTCAGTCACAAATT
TTTATGATTTCGATAGCGCTCAAGTCCATTAGTAAAATGAAAAGATGGTG
CAggtggctctgggtacgagattagAGACCCCGtt

Run BLAST on NCBI

transcript from alignment at scaffold_410:40264..48202+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00064299 ID=TCONS_00064299|Name=TCONS_00064299|organism=Clytia hemisphaerica|type=transcript|length=7939bp|location=Sequence derived from alignment at scaffold_410:40264..48202+ (Clytia hemisphaerica)
ACAAAGAGCCACCTGCACCGACCAAGAGACGCGACGTGAACATAATTGAA
CTGATCTTTCCTTCCGATCTTCTTCCGTCCAACATTTGTATTGAAAGTGG
TGAAAATAGTGAagacaaaatttctgaaaatatcaaAGGGCGTTCGATTG
AAGCCATCGTTAAAACGGGCCAATCAAGTGAAAGCATGActgaaattaac
caatcagatGGTAGACTTGAAACTTTAAACCAATCAAAAGCTAGTGGTTT
GaatttgaaccaatcagagGATAGCAAGGCCAAAACTAGCCAATCAAGCA
TATCTGATGTTACAACAACTGACAAATCAGATGAAACTGTCCTAAAGCTT
GATCACTTCAAGATAATCTCttcaaaccaatcaaatcaaacTCTTTCAAA
gcccaaccaatcagaaaggaCCGAGATCTTaaacagccaatcagaagaaA
CCAAGCTTTTaaacagccaatcagaagagaccAAGCTTTTaaacagccaa
tcagaagagaccAAGCTTTTtaacagccaatcagaagagaccAAGCTTTT
aaacagccaatcagaagagaccGAGATCTTaaacagccaatcagaagaga
ccAAGCTTTTaaacagccaatcagaagagaccGAGATCTTAAACATCCCA
TCAGAAGCAGAGATGATTACAAATGTGCACCAATCAGAAGAAATTCTCCT
CAATTTCAGCCTATCGAATGGAAAAGAAAGTGCTGAAAATCAAATACAAC
CAGGATCTGAAAATGCAACCCATGAAGAAATAAAGGTCGCGCCTACCCAG
GTTACTCCTGAGTATCTGACAGCGCAATGCATTATTGTTTGCCAATCACA
TCCAGAATGCATTTCACTGATATCTGAACTTGAAACATATTTCCAGGATA
ACAATAGCATCGTTCTCCAACATATGGCAAACGGCAATCAATCTAAACAA
GAAATATTGGAACCGCAAAGGATTCTGGTTATTCTCATGTCACTGGATAC
GTTTTTGCAAATCAAACCTCATTCTATTGAATGTGTTTTGTTTAACGCAC
GTGTGAATGATTTGAGGATGTATGAAACGGTCAAAAGTATCTTACTGAGA
ATGAATCCTTTAAAAGTTGTACACGTCAAATGTCATGAGAATGAGGTTAG
TCAAAGCACATGCGTAAATAGTGAGTACACGCTCTTTTTTTAAGAAATGT
GTGTTTTTCAATTTAATCATATATATCTTAACTTATTAACTTTTTGGGGA
AATCGTATTATAGAGCCTTTTTAGGGAACCTGAAAATGTTGAATTGTTGT
TGAGAAAATCCAATAAAGTAACACATAATAATATAGACGATTTTTTTCCG
GGGATTTGAGCTGGAAATGATCATTTCTTTGTAAGAACTTTATAAGATTC
TAACATTACTCCCAACGAATTCGACCATTAGATTTTCAAGGGAAAGGACA
CTTGAGAAATTTGAGTTTGATACAGTTTATATATCTTTATCGATTATTAT
CAAATATTTTCTAAACACTATAAATATAAACATATACTAAAGATTACCTT
TATCGGGCTTTTAATTAGACGGGGAAAAATTTCGTCACCTAGAGGCATTT
TTGTCACTTTTCCCCGACCTGAATTCCAAATTTGTCAAATTTCGACTTTT
TCTTCCCGATAAGGTATCTACTTTACTTTTCTTTTTCAAAGGTTTATTCG
CAACATTTATGGAACGTTTTATCAAAAGAATATCTGGCTCCACCTTTCTC
GATGGATCATCGATCCTTGTACAGGTCAGTAAGTTTGTTCAATCGATCTG
TGATCCAAGGTTTTACAACAATAATGCTGAAATTCCAAGAAATGGTTGAC
TGGAATGACAATTTCACCTTTCCCAATGAACCCTGTGGTAGCTTGCCAAA
TACTGGTGAAAAAAAAATTGGGCCCTTCCCTCGAAAATAAACGCCCCTCA
ATTTAGGGAAAATTTTCGAATAAACGCCTCCTCTGTCTCATGGTTCTTGT
CGTGAAGTGTTATTTTCTGGGAAAGATGTGTCGTGCTGCTCTGAAAACCT
TTGACAATAAGGTCCTGTAAATATTTTCTTATTGTTGACTTCTTCTTTTG
TTTTTCTCTTTAGACTTTGTGGAATGTATTCCTCGTCCATGTACAGTAAG
GTAGACGTCGAAGTTGAACGTAAACCTGATATCGAAAGTGAAAGTGGTTC
CCAGACTCTTATCTATATGCCGATGAGATCAACAATCAAAGCCATTGCCA
AGGTTTGTGCACTATTTTAtgataagaacgtcaaaaaattttgaaccctt
cggatgttcttaactttttcggtTTTAAAACTTATTcttagaaatgttct
taaagtgtTAAAAATCCATTATTTTCTTGCTACAagtcaaaaacttgtaa
cttgaaTATTGTCAACTTTatttacataatagattttcatGCCAAAGATG
CCAAACCATCTTATTAAGTCCCTTAAAGGTTCTTGGTTGCAGTGTtgcgc
tttttttataagaacaaactatataagaacataaggcttcgatggccaaa
atgataagaacaagttgagaacattttcagactctaaaacaaccaaattt
ttaaaaagttgaagagaaatactcacaaaatggtgaaaatatgaacattt
ttatGCTTAATACTCAAAAACCTGTATcattttcaaacctttttcCGCGT
Gaggttatttatttatttttttcagatgagatggagtttttataagattg
gtcgtttgaagtaataaaaatgacgcgttctttagaaaaagtaacaaaat
tgttttattactgattaacgaccaaccaaatcaaataagagctagTAAAA
ACTCCATCCCGTCCCTTTTTTCGTCTCAGAGTGATCCATCGGTGTCGAAA
ACTGATGAATCAGCATTACGTCATGCAATCAAGTTGCTGAAAGAGAATCG
TGAATTGGACAACAAGGGAGATGTCTTGAAAAGAATTGAAGCACCTTCGA
ATTGTCaagaaatgaaagaatttttcgTACCTCGAATCATGGATGAGAAG
GTATATTTGTTTTCCCCCGCGAAATTTCTGATTTCGCCAgtatgggcttt
tccagaaaaaaaattgaatatggggggtggaggatataacatttcttTAG
AAATTTACNTTTTCCCCCGCGAAATTTCTGATTTCGCCAgtatgggcttt
tccagaaaaaaaattgaatatggggggtggaggatataacatttcttTAG
AAATTTACTCCTCGGATATTGTGACTTTTGATCCTTCAAACAGCAGGTAT
AACTcccggacaagcattagttgaccccctggacactcgAACTGAGCAAG
TTTActccccggacaaggcaaaatttgtagatttttttacTCCCTCCGAA
CACTATATCCTACacccccccccatgtacgaatattgtctggaagagccc
aatattaGGTAGTAGGAGCTTAAAGGTTGGgctaaaatggcaaaaataac
caaaaaaGCCCTACTTCACTTTTTGAAGAACCACCCCACACTTTATCAAG
TCTGTAGAAAAATTCCTAGAATAATGAAATGTAGAACCTAATTTGTGAGA
CAATGCTGTCGTTCTGAGCACGAAATCATTTGAAAATACTATCATACTAT
TAAACATTTTTCTATCTTAGGAGGAATTAACAGAACCAATCAAATCTCTT
TGCCATGGGCAGCCATTGTACGTGTATCGGATGAGGTTCGCGGAGATGAC
TTCTAGAGAAGGTGACGTGTCGACCAGTTTTAAAGGAATCAACACCGTTG
GATTAATATCAACTATCAAAATACCTAAGGTTTGGATTTTTCTCAAATTT
TTTATATCAAATACATCTACTGTGAGCACTCGCAAAGAAATTCTTATGCT
CATAAGTACAAAGGTGTGGTGAGAAATTTCCCAAGGAAAAAATAGtgcct
ttttttgttttcagagCGAGCCCTCggcaaactttttcaaaattgaccaa
tctttttaaacttttaacatCTAATCTGGAATAATTTTTGTCGCTTATTA
GcaaattttgttgttgtttcatCTCAATTCCAAACAAGACTTTACTTCTG
CTCGCAGCCGTTTGTTGAGATAATTTGACTTTGAACAAATgaactgaaaa
aaatgatatatttatatttttattccgATGATAAatgtttttatcgattt
ttcctcttcttttgttttcactTCATAGTTTGAAGAAACGTTTTACGATC
ATTACGGCTCAGTCAATGTTGTTTTGACGGATGACTTTCAGACCATACTC
ACCGAAGACGATTTCCAGATAGTTCAAAACTTCAAAagagatattttcaa
aaatatctacAATCTATTGCCTAATGATGATTCCCTCGTGTCTACAAAAT
ATGCAATTGTAATGCTGCACCCAAATGAAGATTCCCTGgattttgaaatt
atgcatCAAACAACAGCTTACTTTGACTCTCTNCTACAAAATATGCAATT
GTAATGCTGCACCCAAATGAAGATTCCCTGgattttgaaattatgcatCA
AACAACAGCTTACTTTGACTCTCTCATCAAAGACGTTGACACTCGAAAAA
TATTCACGAACACTTTACCGGTAGCCGAAACTATCATTTTAGCGGTCCAT
ACTTTACCAAAGATCAGTGCACCAATGTTAGTGCAAAAACTTCCTCAAAA
CACCGCACATAAATCTGTATTAGACGAATTTCCTGATCAAGAAAAAGCTC
CAACTTTCCTTGCTTACTTCAATTCGAAATATGATGTCAATATCTTAGAG
AGTGAATCCATGGTTCCTGTCAAACATTTAAAAACGGTTTTAAACTCGAT
AAACACGATCGATTATGCAAAACGACGCAAAAGTAAAAGCAAACCGAACG
AATTGCCCCAGTCTCTTTGTTACTTGTACCCATTCTCCTTTCCAATATGG
CGGATTATCTGCGTGTTTCCATCTTTAGTGTATTATCTGAAGCAGTACGA
AAATGCGAAATCAGTGTTGAGCATTTTGAATGAATTCAAACTGATCCAAG
AAAAATACGAAGAAAATTTGTCACGTTGTAGTCCCTTGGATCTTTGTGCG
AAAGATAGCGGAGTTGTTTCGGACATTCACCNCTGATCCAAGAAAAATAC
GAAGAAAATTTGTCACGTTGTAGTCCCTTGGATCTTTGTGCGAAAGATAG
CGGAGTTGTTTCGGACATTCACCAAGAACACTTAATTGTTTCAAAAGGGC
AGTCCCTCGTTAAGGAGGAGAATCGTCAAAATGATTCGTCAATATCTGAA
GAAGCAGTGTTTGCAATTACCAATAAAAGCGATcttgaaaatcgggaaaa
cattcaaaaaatcgGAAGCTTGACCAATGGAGCTCCATCGGCCCTTCATC
TTGCAGAGCAGAACCAGATGAACCTACTTCTGTCCGATAATCAAACGTTG
GAGGATTCATGTCTGGCAATTGAAGAACTTAAATCGATATCCGAAGATAC
CAATAAATCTGCGAAATATCCATCCAAAAAACATCCGATCCCTGATAATC
AATCTCATGATATATGCAATGGTAAAACAACTTTGGGAAATGTAGCTATG
ACAGAAATTCCTGGAATTGATGACTTATCGAGCTGGTCTAACTTTGACGA
AAACGGGTGTCATCAAACTCCTATCCAAGACATTGTAGATTCATCTGAGA
ATCCAGATCTTGTAAATCGAGTTCGAAAAGCTCTCATCTCTAACTCAGCA
ACCGAAAACATTTCGAATGAGATTTTCGAATATTTTGGTGATTCAGTTCT
CAAATATGTTATAACAATCAATTTGTTTTTGACACGCCCAGATTTCAATG
AGAATTCGTTAAACTTCTTTAAATCACAACTTGTAAGTAACGAACTGCTT
TACAGAATTGGGTTATCGAGGCAATTACGAAGATTTCTCTTCTATGACAG
GTTTGAGCCATCGGACTTAAAATCCTACATGTTCAATGATGTTACCTCCG
TCTCGCAGACTGAAACGAGTGAATCCTCCGCATCACAGATTGGATCGATT
GATGAGGAACTCACCACTACCAATTCTTCGCATTTTGAATCTAAGCTATT
TCCCATTAACCAAAGCAACAATACCGCTACATCCGTTTCACAGATTGAAT
CTAATGACTCTGGTAATCATAGCAATAAAGCAATATCAGATATGACAGAA
GCTCTCATTGGTGCGCTGTTCACACAAAATCATGATGTCAACCCGCTATG
GCTCAATTTTCTCGAATGGCTAGGTTACAAACTGACTAATTTTCGCCGTC
TTTTATCAACTGGTCATTATCAATCCAGCCCATGTGACGTTCCTAGTGGA
AATAGCACCTTATCTTATTCACAGCAATATTCTTCCTTCGTCCATCCAGA
TATTTTAGGACATGTAAACAAAGCTTTAACCCAGCCACCACCACCGTCAT
ACCTTACGACCGGTTTACATCAACTGGAAGAATCTCTTGGTTATAAATTC
AAGAACAAATTGCTACCGATTGAAGGCCAGTGTCATGCTTCATTTGCAGG
CCGACTTAACCCGTGGACGAACTCTAATCAACGGCTAGAATTTATCGGAG
ACGCTATTTTGGAACTTATGGTGACGTCAGAATTGATTCGAAGGAATGAA
AAAGATTCACTCTCGTTTGACCAAGGATCCCTATCTAACATCAGAAGTGC
AATTGTTTGTACGCGTACTCTTGCTGTCGTGGCCGCACGTCTTCAACTTC
ATGGAGGTTTGAAGATATTGGATTTACCGACTAAGATATTGATCGATGAT
TTTGTGGAAGCTCTCGAAGGACTGGGAACTAAATTTGATGAGGTgagttt
ttttctataaatggTAGACTTCCCTTATTCAAAGGGCAAAGGGGAATAGA
ATTGTTCAAGTTAAGAGGGTTTCGAAGACAATGAATaataacttcttttt
tttctaataCTGATTAATGGTCACACATTCATTCAGATATATTGCTTGTT
TCTACCCCTTTTTTGTTCTTAGGGTTCGGGGTCGACTTAGTTTAGCCAAA
AGTTTTGTTTCGAGTCGCATTTCTTAActtaaaatttcacatttttattT
CAGGACTTTTACGAAGCCAACGTAATAAAAGCACCGTCAGACGATAGATT
TGCTGGTGCGATTCTCGAGATACCAAAAGATCTTGCGGATTGTACGGAGG
CTGTTATCGGTGCCGTGTATTTGGACACCGGTGGTAACCTTCAGGAGACT
TGGTCTATCTTTGAGCCACATTTCGCTGATGTTATTGGTAAGAGATTTAC
AAATTTACCTCAGAGGCGGAGATAATGATTGACGATGTCTTGATTTTGGT
CTTTTCTTGATATGTGAAGATGACGTCATACTTTCTAACAGAAAAGCCcg
gaaaaagtatttctatttctaGTAACAGAAAGGGGCTAATCCCGGCCTTT
TTCGGGTGTTTGGGCTAGAAAattgacttatgcatatcaatTATACGTAT
TTGGGATCTTGCCTTCTGCTAGTCTTTCTTGATTGTGAACTACCTATATA
TAACACAATTTTAAATTGTAGACTATTTTTTTTCTGTGTCTCTATAGTGC
TAAAGAACTTCGTTTTCCTACAGAGGTATTTTGAATAGGTATACGTACCT
AATTTCAACTGTATATAAAAGAGTTTTAGTATAGTATTTCCCCCATAGAA
TCCTTGTGTCGTAGTTATGGGCTTTAGAGAAAGCGCGTTGGGATTTGAAC
CTGTCCTGTTTTTTAGATTGTTTCTCATGTCTCCCTgcttttattttaga
tttttacgtGACCCGATCACCTCCCTCAATCTATATTTATGTCAGTCACA
AATTTTTATGATTTCGATAGCGCTCAAGTCCATTAGTAAAATGAAAAGAT
GGTGCAggtggctctgggtacgagattagAGACCCCGtt

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_040315	XLOC_040315	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_410	supercontig	scaffold_410:40264..48202 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.232035	0.304108	0.159704	0.100895	0.24351	1.25985e-06	0.534123	0.552957	0.351677	1.11951	1.34631	0.683213	0.934879	0.474661	0.60006	0.885839	0	0	0	0.517271	0	0.000731683	0.306228	0.331071	16.4449	11.4953	0.199058	0	0.416007	0.290221

Blast

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BLAST of TCONS_00064299 vs. Swiss-Prot (Human)
Match: DICER (Endoribonuclease Dicer OS=Homo sapiens GN=DICER1 PE=1 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 8.296e-19
Identity = 67/230 (29.13%), Postives = 115/230 (50.00%), Query Frame = 1

Query: 3856 FVHPDILGHVNKALTQPPPPSYLTTGLHQLEESLGYKFKNKLLPIEGQCHASFAGRLNPWTNSNQRLEFIGDAILELMVTSELIRRNEKDSLSFDQGSLSNIRSAIVCTRTLAVVAARLQLHGGLKILDLPTKILIDDFVE------ALEGLGTKFDEDFYEANVIKAPSDDRFAGAILEIPKDLADCTEAVIGAVYLDTGGNLQETWSIFEPHFADVIDFY---VTRSP 4518
            F HPD     +K L      ++L +G    E+ + Y+FKNK   ++   HAS+    N  T+  QRLEF+GDAIL+ ++T  L     +D      G L+++RSA+V     A +A +   H   K +      +IDDFV+       ++G+ ++          ++   +D      +E+PK + D  E++ GA+Y+D+G +L+  W ++ P    +I+ +   V RSP
Sbjct: 1650 FDHPD----ADKTL------NHLISGFENFEKKINYRFKNKAYLLQAFTHASY--HYNTITDCYQRLEFLGDAILDYLITKHLY----EDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSE----------LRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSP 1853

The following BLAST results are available for this feature:

BLAST of TCONS_00064299 vs. Swiss-Prot (Human)

BLAST of TCONS_00064299 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DICER	8.296e-19	29.13	Endoribonuclease Dicer OS=Homo sapiens GN=DICER1 P...	[more]

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TCONS_00064299 (transcript) - C. hemisphaerica