TCONS_00064698 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064698
Unique NameTCONS_00064698
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length163

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064698 ID=TCONS_00064698|Name=TCONS_00064698|organism=Clytia hemisphaerica|type=transcript|length=163bp
GGTTGCCAAAAATCTACATTTGACCATTGATCAACCATAAGGATCTCGAG
TTTCGTACAAGTATTGAGTGGTGTGTTGTCTGTGTATTGTATACTCTTTC
GCAAAAGATCGTCATGATGAGAAAGATATGTGACGGAGGAGCTACCAAGA
AGCTTCAAAGGAC
Run BLAST on NCBI

transcript from alignment at scaffold_421:111392..111613+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064698 ID=TCONS_00064698|Name=TCONS_00064698|organism=Clytia hemisphaerica|type=transcript|length=222bp|location=Sequence derived from alignment at scaffold_421:111392..111613+ (Clytia hemisphaerica)
GGTTGCCAAAAATCTACATTTGACCATTGATCAACCTTAAGGATCTCGAG
TTTCGTACAAGTATTGAGTGGTGTNCATTTGACCATTGATCAACCATAAG
GATCTCGAGTTTCGTACAAGTATTGAGTGGTGTGTTGTCTGTGTATTGTA
TACTCTTTCGCAAAAGATCGTCATGATGAGAAAGATATGTGACGGAGGAG
CTACCAAGAAGCTTCAAAGGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040582XLOC_040582Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064698-exon-scaffold_421-1491911889:111392..111408TCONS_00064698-exon-scaffold_421-1491911889:111392..111408Clytia hemisphaericaexon
TCONS_00064698-exon-scaffold_421-1510915933:111392..111408TCONS_00064698-exon-scaffold_421-1510915933:111392..111408Clytia hemisphaericaexon
TCONS_00064698-exon-scaffold_421-1575043694:111392..111408TCONS_00064698-exon-scaffold_421-1575043694:111392..111408Clytia hemisphaericaexon
TCONS_00064698-exon-scaffold_421-1491911889:111468..111613TCONS_00064698-exon-scaffold_421-1491911889:111468..111613Clytia hemisphaericaexon
TCONS_00064698-exon-scaffold_421-1510915933:111468..111613TCONS_00064698-exon-scaffold_421-1510915933:111468..111613Clytia hemisphaericaexon
TCONS_00064698-exon-scaffold_421-1575043694:111468..111613TCONS_00064698-exon-scaffold_421-1575043694:111468..111613Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_421supercontigscaffold_421:111392..111613 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064698 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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