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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064793 ID=TCONS_00064793|Name=TCONS_00064793|organism=Clytia hemisphaerica|type=transcript|length=1092bp
agaacaagttggtcaaatttaaaaagtgatagctcaaattttaagttagg
atatctactttctaaatatcaaaactccaagcactttggggcattttttc
ggcctcaagacatcgggaaacgtctgaactttttcgtgggtcacccggta
taggTGGcagttatttatttttaatcaattttatcTAGTCTTAAAAACAT
TTGTATTTTTTACGAAAAGCTGTATTATTTATAGttgcttttttgatttt
atcttgAAGTAAAAATTACCGTTGTTTTGCATAAGTTTCCCTTTCCTTCT
CCTGACTTTTCCGGGATTACTCTGCTATTTTTTCCGGGATAGCtggcatg
agattggaaagggttttctTCTAAAGATACGGAAAATCTTGTAATTACTT
ACGAAACTGCTCAACTTCCCGTAGCTCATTttggtctttttccgctagaa
aaatgacaaaGGAATCTTAAGCACTGGGaaatcttatgcaaaacgacgGT
AGATGACAAGGTCAATTTTTGCCACACTTTGTAAAACGAGAAGGTTTTAA
GAAGGGATAAACTTTGAATCTGCAGTAACCCAATTTTGTGCCGTGAAATT
CTTATTTTTGGGACCTACTATAAACTTTGTcagtttaattttgcatttaa
TAATTTAAACCCATTTCCTATAGATGACACACGTCTTGTTAGAACTTTCA
TATCGACGTTTTTTTAAATACGAAAATCTTATTCCTCTCGTTACTACAGA
GGCTTCTATCCgccatttgaaaaaaattccaaaaagaaaagGTCGACGTT
TTTTTTGTCGAGATAAGCAGGTCTTAATTGAGAAAATTTCCGAGATAACA
TTTGCTAAGTTGGAAATTGTCGAGATAACTTCAGCTAAGTAGGAAATTGT
CATGATTAAGCGTGTTATCTCAGAAATTTCTCAGTGAAGACCTGCTTAAC
TCGATAAAAAAATCGTCGACTTTttcctttttagaaaaaaagtgaaaaat
tatcaaatggCGGATAGAATAGCCTCCGTACGTTACAGCTTCTCTGTTCg
tatatttttgtacatttgatcagccatttttttattataaag Run BLAST on NCBI transcript from alignment at scaffold_423:148269..149360 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064793 ID=TCONS_00064793|Name=TCONS_00064793|organism=Clytia hemisphaerica|type=transcript|length=1092bp|location=Sequence derived from alignment at scaffold_423:148269..149360 (Clytia hemisphaerica)
ctttataataaaaaaatggctgatcaaatgtacaaaaatatacGAACAGA
GAAGCTGTAACGTACGGAGGCTATTCTATCCGccatttgataatttttca
ctttttttctaaaaaggaaAAAGTCGACGATTTTTTTATCGAGTTAAGCA
GGTCTTCACTGAGAAATTTCTGAGATAACACGCTTAATCATGACAATTTC
CTACTTAGCTGAAGTTATCTCGACAATTTCCAACTTAGCAAATGTTATCT
CGGAAATTTTCTCAATTAAGACCTGCTTATCTCGACAAAAAAAACGTCGA
CcttttctttttggaatttttttcaaatggcGGATAGAAGCCTCTGTAGT
AACGAGAGGAATAAGATTTTCGTATTTAAAAAAACGTCGATATGAAAGTT
CTAACAAGACGTGTGTCATCTATAGGAAATGGGTTTAAATTAttaaatgc
aaaattaaactgACAAAGTTTATAGTAGGTCCCAAAAATAAGAATTTCAC
GGCACAAAATTGGGTTACTGCAGATTCAAAGTTTATCCCTTCTTAAAACC
TTCTCGTTTTACAAAGTGTGGCAAAAATTGACCTTGTCATCTACcgtcgt
tttgcataagatttCCCAGTGCTTAAGATTCCtttgtcatttttctagcg
gaaaaagaccaaAATGAGCTACGGGAAGTTGAGCAGTTTCGTAAGTAATT
ACAAGATTTTCCGTATCTTTAGAagaaaaccctttccaatctcatgccaG
CTATCCCGGAAAAAATAGCAGAGTAATCCCGGAAAAGTCAGGAGAAGGAA
AGGGAAACTTATGCAAAACAACGGTAATTTTTACTTcaagataaaatcaa
aaaagcaaCTATAAATAATACAGCTTTTCGTAAAAAATACAAATGTTTTT
AAGACTAgataaaattgattaaaaataaataactgCCAcctataccgggt
gacccacgaaaaagttcagacgtttcccgatgtcttgaggccgaaaaaat
gccccaaagtgcttggagttttgatatttagaaagtagatatcctaactt
aaaatttgagctatcactttttaaatttgaccaacttgttct
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064793-exon-scaffold_423-1491911889:148269..149360 | TCONS_00064793-exon-scaffold_423-1491911889:148269..149360 | Clytia hemisphaerica | exon |
| TCONS_00064793-exon-scaffold_423-1510915933:148269..149360 | TCONS_00064793-exon-scaffold_423-1510915933:148269..149360 | Clytia hemisphaerica | exon |
| TCONS_00064793-exon-scaffold_423-1575043694:148269..149360 | TCONS_00064793-exon-scaffold_423-1575043694:148269..149360 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_423 | supercontig | scaffold_423:148269..149360 . |
Blast
The following BLAST results are available for this feature:
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