TCONS_00064794 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064794
Unique NameTCONS_00064794
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length186

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064794 ID=TCONS_00064794|Name=TCONS_00064794|organism=Clytia hemisphaerica|type=transcript|length=186bp
TNTGCTGGTAAAGGAAAGGGTCGCGGTCGAGGACGTGGTACAACTATGAA
ATTGTAGACAATGAACAActatatagaaactttttcacaaaaaagacACT
ACTGAATATACATTAACATGTAGTTATAATGCTTCATTTATAACAGTGTT
GAAATGCTGTTAAACTCATAGTTTATTGGCAGGNAg
Run BLAST on NCBI

transcript from alignment at scaffold_423:156446..156631

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064794 ID=TCONS_00064794|Name=TCONS_00064794|organism=Clytia hemisphaerica|type=transcript|length=186bp|location=Sequence derived from alignment at scaffold_423:156446..156631 (Clytia hemisphaerica)
cTNCCTGCCAATAAACTATGAGTTTAACAGCATTTCAACACTGTTATAAA
TGAAGCATTATAACTACATGTTAATGTATATTCAGTAGTgtcttttttgt
gaaaaagtttctatatagTTGTTCATTGTCTACAATTTCATAGTTGTACC
ACGTCCTCGACCGCGACCCTTTCCTTTACCAGCANA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040636XLOC_040636Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064794-exon-scaffold_423-1491911889:156446..156631TCONS_00064794-exon-scaffold_423-1491911889:156446..156631Clytia hemisphaericaexon
TCONS_00064794-exon-scaffold_423-1510915933:156446..156631TCONS_00064794-exon-scaffold_423-1510915933:156446..156631Clytia hemisphaericaexon
TCONS_00064794-exon-scaffold_423-1575043694:156446..156631TCONS_00064794-exon-scaffold_423-1575043694:156446..156631Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_423supercontigscaffold_423:156446..156631 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	40.6894	36.4404	18.1027	24.2108	30.511	33.5936	34.6447	25.4534	12.0401	23.6182	17.133	34.3211	18.1203	15.4773	8.5531	11.1877	0	0	0	0	15.1176	11.5647	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064794 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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