TCONS_00064802 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064802
Unique NameTCONS_00064802
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length508

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064802 ID=TCONS_00064802|Name=TCONS_00064802|organism=Clytia hemisphaerica|type=transcript|length=508bp
CGTGCCACATTATTTTTTGATTATctccctaaactcgatccaaacttttt
tttacacttttttctattgtctttaggtgcgaaataaagactgggacggt
cttagggtggtaaaaaggacaaaaaatgcccgcgcggcaattggcggcta
cggtcgaaaaggtgtattcagcGCGCACTCGACAAACTAAAAAGTAACTA
TGAATATTACCGGAGATCTTAGATAAAGGCCGTACCAATCAAATTAAAAG
GCAGAAACGTAGAAAGAATTCAATGACAGAGAGCCATCTGAGAACTTGTT
GGCTTCTTGAGACCAAATCGATACTTGAACGACCCTGAAAATACTTTTGT
TAGAAAGAGGATAGTCTAACTTTTAACTCTAACTAACTCTTTAAATTTGG
TTGAGTGGTTTAAGAGTTTTGGTTTTagcttttaaaagtcaaaattaaCT
TTCCAAAATGtgcaaaaacacgtcaaaaaagATTGCTGATCTTTAAGGAA
TGCCTCCa
Run BLAST on NCBI

transcript from alignment at scaffold_423:345576..346083

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064802 ID=TCONS_00064802|Name=TCONS_00064802|organism=Clytia hemisphaerica|type=transcript|length=508bp|location=Sequence derived from alignment at scaffold_423:345576..346083 (Clytia hemisphaerica)
tGGAGGCATTCCTTAAAGATCAGCAATcttttttgacgtgtttttgcaCA
TTTTGGAAAGttaattttgacttttaaaagctAAAACCAAAACTCTTAAA
CCACTCAACCAAATTTAAAGAGTTAGTTAGAGTTAAAAGTTAGACTATCC
TCTTTCTAACAAAAGTATTTTCAGGGTCGTTCAAGTATCGATTTGGTCTC
AAGAAGCCAACAAGTTCTCAGATGGCTCTCTGTCATTGAATTCTTTCTAC
GTTTCTGCCTTTTAATTTGATTGGTACGGCCTTTATCTAAGATCTCCGGT
AATATTCATAGTTACTTTTTAGTTTGTCGAGTGCGCgctgaatacacctt
ttcgaccgtagccgccaattgccgcgcgggcattttttgtcctttttacc
accctaagaccgtcccagtctttatttcgcacctaaagacaatagaaaaa
agtgtaaaaaaaagtttggatcgagtttagggagATAATCAAAAAATAAT
GTGGCACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040644XLOC_040644Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064802-exon-scaffold_423-1491911889:345576..346083TCONS_00064802-exon-scaffold_423-1491911889:345576..346083Clytia hemisphaericaexon
TCONS_00064802-exon-scaffold_423-1510915933:345576..346083TCONS_00064802-exon-scaffold_423-1510915933:345576..346083Clytia hemisphaericaexon
TCONS_00064802-exon-scaffold_423-1575043694:345576..346083TCONS_00064802-exon-scaffold_423-1575043694:345576..346083Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_423supercontigscaffold_423:345576..346083 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.118709	0	0.227282	0.132092	0.320368	0.253108	0.76408	0.714166	0.300067	0.375804	0	0.158257	0.898379	1.40653	0.654428	0.581349	0.268505	0.283013	0.253829	1.05998	0.836793	1.20837	1.26306	2.29116	1.91613	4.4483	0.33465	1.40538	0.397962	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064802 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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