TCONS_00064851 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064851
Unique NameTCONS_00064851
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length524

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064851 ID=TCONS_00064851|Name=TCONS_00064851|organism=Clytia hemisphaerica|type=transcript|length=524bp
AGATTTTTAAACGAAAGGACGAAAGAGTGTGAGCTGATAGCTGATGCTGA
TGcAAAAAATAACATTATTAAATCAGATTTATTAACAAAAGGGACTTAAA
CTTACAAATAAAATGGCATCCAATAAATTTGAAGCACTGGCACGTGAAGA
TAGTAACGATAGTAGCAGCAAATCTGATGAAGGGGAAGAAAATGGGGAGA
TCGGGTCAGATGATTCTGGCTCAAAAGAAGACCACAATAAATTCGTTTTC
CCAGACGAGCCGTTCGTAGAGAAAGGGGAGCACAAATTGCAATACTGTTA
TTGTTTATGGTTCTCACGCAAAAATCCTGGCAAACAACAACTTACTCAAC
AGAAATATGAAGACAGCATCAAGCTGATCGGTGCTTTCTCTTCCGTGGAA
CAATTTTGGGCATATTACTCGTTCATGGTCCGACCAGGAGAATTGACAGG
ACACAGTGATATTCATTTATTTAAACATGGCATAAGACCAATGTGGGAGG
ACAAAGCAAACAAGAACGGTGGCA
Run BLAST on NCBI

transcript from alignment at scaffold_425:305204..316107+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064851 ID=TCONS_00064851|Name=TCONS_00064851|organism=Clytia hemisphaerica|type=transcript|length=10904bp|location=Sequence derived from alignment at scaffold_425:305204..316107+ (Clytia hemisphaerica)
AGATTTTTAAACGAAAGGACGAAAGAGTGTGAGCTGATAGCTGATGCTGA
TGGTGAGTATAAATTTTCCAAACTTTTTCTGCAATGTTTTGTGAGAAAGT
AAAGAATAGGTTTTCATTCAAATATTACCAAATCACCATAGTTTGATGCC
AAAAAACACAAGATATATACTAGGTCACAGTTTGCTTCACTTCAGAGCAA
ACTGCTGTTTTACAGagcaatacaccgtttaggagtctcgccatttcacg
gtactccattgcagaggcccggtaaaaatggtaggtaaaaatgcgcactt
tagtactgtgaaaggttagaggaatgtaaacattgtgaatttttgtctct
cctttaaagagaatgataatgattagatatttgaacatgatatcaatgat
aattttataagtctctcctgaaaatttcacaaaaattcatcaagaggaaa
agaagttatgattaaaaggagttctNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNtttacctaccgtttttttacggaggagagtgaattttccgtgatcg
ctaaaatcaaaacaatggaaaattggattgacgcgtgcgcagtcgacact
cctaaatgGTGTATTAACACTTTCTTCATCGGGAGTCAACAAAACAACAT
CTATCACAaatctagcctgggaatccaagctcataattttagaaaaaaca
aaaaatacctcacctcacaaagttctaaaattatagagcttggtgcaggt
agattagtctgaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNACAGTCTGTGtatgaacccttgttgacagactttctgaactttgga
aacccaggcaaacgcacataatcaacttaccataaaaactctttcacaag
ctctaaatgctaaagactttcaaaactactaaaaactacatcaaaacatc
agccacatgtatttagacttccagccaacagccattttgttttgaaatga
gtcTATGTTTTCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNtccctgcaggcgagttacctgcaccaagcgttaaaccagc
agcaaaaatatcataaactagactgtgaaaaaagtttaacgcttggattc
ccaggctatcaCAAATCATGTATGATacttcataaaaaatgaaaaaaagc
ataTGTAAAATGCAATgtcaaaaagaattgaagaggACCGAGAGAAGTCC
TAATTCAAAATTACTCCAAGAAGTGCATCTAAAAACAAagacagttagga
acatttggcgagttcctgtacgcgaccgcgatctaaaaaatcataacaac
actcattaaaaaatgacgtttgtgtcttttcgcacttttttttagcctag
acgatgtagcaaacatagtaaatataagcacactgtgcttttaattggct
gaaatttttttttgcgtcggaaaagctttttcaaactttcagcaatgatt
gaccaaactgttacaatgaaaattatccagcgcattttttatcttcttat
cttcttaatcttcaatgaagcactcaacgTTTACTGcatttaagcacata
agatattcttataattattgatattcactaaaACACAGTTCGTTGTGtgc
tgcggtggagtgtatgacgtaacttGCGCGGTAACTAGCTCGCcttttgt
tggaagatcataaTGGGCGTTATAgcgttaccaccctcaaagctagcggg
cgcccctgtctttccgcaactctttccaccatcttagatggccataacaa
tagatccaaaagggcgccataatcttggaagataatNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNgatggaaaatagtaagaaacttaagtttacaagtggcatttagtt
tttgctggcttatagaatggcaggatcctggatggtttccctaactgaaa
gACTACCTCTAAAATCAAAACGCGCGCAtctccagacggtgtcaatcgaa
caacttcgaacaaaaatcgcaatcgaaccaatcgaacgtaatcgaacgcg
atcaaataattgcgattcgattgtcgaacgtaatcgaatctcaatcgaac
ggcctattcctgggtaatattcaattgtgttcgattgcgttcgagtaatg
ttcgattgatagttgactatgttcgattggttcgattgattgtcaattac
attggattaatgttcgattacgattatgttcgatgagtttgattgcgatt
aaatcaaattggatcactctgttagagcttttttttagcgtgggcggacG
AGTGCTTAAGTACCGgaccaaagcaaataaaatctaatacacaattgaat
caatcaaacgtaatcgaatacaatcgaacgtaatcgaatacaatcgaacg
taatcaaatacaatcaAACGTAATGTAAAataaatcctgggtaatattcg
attgcgattcgattgcgttcgacaatcaaattgcaattattcgattgcgt
tcaattgcgttcgattgattcggcgttcgattcgttcgattgacaccgtc
tgggcaTCTAGCTAACACGCTGAACTTTCTAAGTCACCGTACCATCCACC
CATCCCTCTCTGGGCCACCGTACACATCTCTTAGATATTTGCGTGGTTAT
CTCCCTAGTATTCAGccaccaaaattgaaaattaagatGGTAACTCAAGC
TgcacactttcactttcgatttcaacttTTCAACCTTCCAGACTCCGTAA
ACAAAAACACGACGGTAAAAAACCGCCTTCAGGCGGTCGATAatatatac
cgtgaagtcgggtatgGGGCCACTTCTGCACTCACATCACATATCGATCT
TTCTTTATTGATGTTCCACACACTGCCAGAGAGAAGTTGCTTCCTCCTTC
TGCTTGGTACATTTTGCTTGTTTTCCTCCGAGTAGTGGTATTCTTTTACA
CAGATTGGTTCCCAGACCCGCATAAGTTATGACACAGTAAAATAAAGCCC
CAAACTTTTTTAACATAtatccagacaatctcaatcgaacggaatcgaca
atcgaaccagtcgaaccaaattgaacgcaatcgaccgattgaaattcgat
tgtcgaacgcaatcaaatctcaatcgaatattaccgcagttttcagattc
gattgatattcgattgcgttcgatcgtcgattcattgacccccggattgt
tcatcgcataatttctacggaaaatcgaaagtaatttcattcggcttgtg
atgtttgagagcttggatgttgggaagctgcaagaataaagccagacgat
ctcaaacgaacggaatcgacgatcgaaccagtcaaacaacaatcgaacca
atcgaatattacccagaattttgacgtttgattgagattcgattgcgttc
gacaatcaaatttcaatcggttgattgcgttcaatttggttcgattgctt
cgatcgtcgattccgtttgattgagattgtctggataTATGAGCATCTCC
AGCATTTTACTATAACTGGTTTATTCTCTCGATGCCGTGatgaaaaagag
gaaaatttgatGCAAAGGTGTTTTGTCCGCTAGTTTGAAAcgcaggttca
ggtttcaggttacaggttcaggttacaggttaaaaCAGAATAATTGCCAG
ACCAGATATCATTTCGACTTGTGAAGTTTGCAGaccagataaaaaaaatt
cccggTGTTTGAAAGTTCCGTTTTTTGTCCCAATTATGCTGTatttagcc
tccttttcaaaaattttccacccaggacatttttattcaacccccccccc
cccccccgctccACCCTCTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NCCCTCCAGCttttaggtacccgagagtaactcttcatacaaaaattaca
aaacgcatgtttggactttgtaccctatgctgcacgcaagcacttaaaCC
AAAGTCCcacaaaggcgggacaaaaatcagttttttaaagtttgcaaAAA
TCGCCACataaaagatctttcaaatttagtatgtgaatagagcagtaaaa
aatacaactgttctatttttcctttttttgcaaaagatcttggaatgaaa
ataaagggatatataccgataattgaatactatccattgatgatctgcgg
cactatcgtaaagctagaattcatagtgcggaaaggggtctgatcccccc
ttcttaaatgatcccaacctttaaaaatgcctatctcccaagggttttgg
gctaaattttttatggtaaaaagggacgggaaacagtaaagaaaaattaa
gtctgtCAAATagaataccactttttagtgaaaataaagaacttcctttc
atgcagaccaaattttATAACAGTGCTTggaaataatctacaatatatgt
aagccccccttcttaaacgacccccccctccttgctatcccccccttttt
aatgaaaatttctgatccctccccttcttcacttttttggaaggtgtcat
ccccccccttaagaaaggggggtcCGAAATATGCAAACAATCCAATATCT
GAATGAAGATGATTTTATCCTTCATGTTTCTTGAAACNtcttcacttttt
tggaaggtgtcatcccccccccttaagaaagggggggttCGAACTATGGA
TTGCTTcgcatactcttcgcttgagaaaagattgacagattgaagttttt
cactcGCGCGGGAGCTTGCAGGCGTTCTGCGAGCGTTTTgcaagcgttct
cggctcaatccttaGACCgcgttaaaaatggtagactgtgctgtgataga
tcatttcgatggaagttgttggaatgtttacaaggctcttggcAGAAAAT
CGTttattttattgtcaatgataaCAGTgcagttattaattttgttagat
ctgacaaattgatgtttgtaagtgcactttatagttttgattcccattga
agaatcgtattctggttttcatgtcattagatgctgttttagagctttag
agctagcctgcctGGATTTTTCCGGATGTGCGTCCGGGCAGCATTTTTTA
TTGAAGCCTTTTTTGCGATCTCGGTCCTCTAATTCAAGTGAAAAGTCATC
TAAAATAACTTAAATCATTTTAtttactttctttcttttttcagtgTTGA
CTTTTTTACTTTGGTGAGAAAATGAGTTTGAGCTAAAAGGTCTGTCAAGG
AAGGATGATGGCTGTTAGTGTGCTAGAAAGATTTAACAACCTTCCACCTC
ACAGATGTTACGCGAGGTAATCGTCACAAGCCAAAATCCATGTTCaacag
attttgaaaacgaaagtgtaaaGAATAAACATTGCCGTAAACGCGTTTAA
AACGCGGGTAAAAAGCCCTGGGCCGAGTCCCGCGTTTGCTCATTCAGCCA
ATCAGATCATACAATCTAGCCGGTTCCCAACTCCCGCTATAAAATCACAT
TGTATATATCGAAATAAAACCGGTTTAAATATTTACTAAAAGCTTATTTC
ACTGAAAGAAAATAGCTTTAATGaaacaaattttggttaaatatCTTTCT
TATTATATATAAAACCTGAATCTAAATGGTTTTGAGAAGTAAAAGAGTGT
ACGAATAGACAAAGATCGTTTATGACCCCCGTCTCAGATGAGTTCTTCAG
GCTTTATCTAAAGATAGAGAACTAAAACAAGCTTGACCcactaaactatt
tattcagcACCAGACTCTCTGACATTCTGAGAAATTATTTGCCCGGGAAG
AGCAGCAGATTTCAGCGGAATGGtgctttttgctctaaaagtgtATGGTG
GAAATGGTGcttgttttcaaacttaaacatcaattcatttgaaatatttt
gtttatttggattattgaaaggttaaagatttgttttatttttatttttt
gatgatagCTTCACTCAATCACTTACAACGAGCTCTCGCATGATACCGCC
ATTATGGagttttatttttgtgtttgcTAAATGCGATTTTGTGAGACTTT
GCATTACCAACTTTTGCTTATGGCAAACACCTGTGACCTCCACACACGCA
TTATAAATGTTAGACAACAAaattaccgtgagtggtcctaaatccgacag
ccctgcctacaTCCGAcatggtctttcaaagatacaaactaaaataaaaa
aatccttttGCTGTGatgcaacgaagataccaaagtgtcaactaaactct
GGGAGAATTTGATACAGTAAACCAGTTGAACCAAATAATTAACAATAATT
GATTCTTATacgaaacataattttttttgcaatatgtCAAACATCATAAA
TgacaataaaaggtaattacatTCAgacttttacaactcacactttttaa
ttacattattgacattttgacattatagccatcttgttggttgttagatg
ttttgaatttgttttgagaattcttgcaatagtttttcgttcaacttgga
gaaggagtgtttgtaaacatagaatttttattcataacctttatttgggg
ggtcggaattaggcagggctgtcggatttaggaccactcacggtaccttA
TCGATCTTTATTGATGCCGGCCCCTAACGACCTTTCTTACGCCCACGACG
AAGGAAACAACGCCAATAGGAGATAACGGCGTATTGTGATAAAGTTGTTA
AGTGAGTTCTAGCTGCATAACTTTGCTGTGTGTTTTGCGACGGATTCCAA
GAATCATTCCAAGAGGAAATCACGCGCTGGATAAACACTCGCTTGTGTGT
AATGTCAGGACCGAAATATCTTCGAAAAAATCTGGCTTTATTCTATTAAA
TGAagctcaaaaacattaaaaaatttaaaaaattaacaatAGATACAATT
AATTTACAACTTTAATCAAAATCATAACTATAATTGTCTTAATACAAAGT
TAGCATAAAGTTCTTTAATTTTATTCAATGTTGAGCGCCCGGTTTCCACC
CGGAGCAGTGTGGGCGCGTAGGCAGAAAAGGGGCGTTTTCAACCTTTAAA
TTTTTACCGCTCGGGCGGAGTCTGGGTGGTATCCAGGCGTTTTTGAcaat
ctatttattttttccgccTGGTCGCGCCTGAAAAAATCCGGGCGTCGCCG
GGAGTCCTCCTACCCTATATTGGTTGGAATGGCGCTAAGCGTGGgaaaaa
tcgatatgtgagtggcccctaacttgcatcagtggagggaaacttgcata
gccatcaaatgactgaccaaacaaagcagcaaaatttcaaaacaaatgaa
ctacccagctccgctcgcagctcttctctaccatttttgttttgatttaa
ctttgtattttaatgaccagacaggtcattcatttgagggctatgcatgt
tacgGTATCAgatagggtcagggttggagctcgaaaccaTATCTTGttag
attgggtaacttgcaagGACCCTCCTGGTGCTCCGGGAACTTCAGGAGTT
TTCCAgagcagctaaaaaaacactatttttctctccgGAAAGTTCCCAAG
CTTTTCCGGTGCTTTcggagcaagtgatttttaacgcgttctaaaaaaat
gtttcatgGCAGTTAGCAGTATGGCATTTTACCTGGATTGGGGGACGTCA
CCTGATCGAACTACGTCGCTTGTTCTGGGTACACGTGTCGCTCAACGGTC
GGAGCAACGGTGTAGTCCAACCGAGCCACGGTTTTCTATCACTATTACTC
TTTCCTGTGTCTGCCCCCTGTGCAAACTTTTGGGTCGCTGAAATCTGCAT
AAAGGTAATCTAAAAAATTTGCCGTTGAATGAGCGTTCAAACTAAAATTT
TCACTGTGCGGTTCACGAGTTATAAAATTACCTTGATACAATAATCTTGA
AATGTGCTTTACATTTGAACTAGGTAGGTATTGAGTGGAAAATCagcttt
ttattgaatttacaGCTTAGACCAGCCCATTATCTAAGTTGTTTTTCACT
TGCCAATTTTGACCTCCCACCCAGCAGGGGTCCCTACAACTTAGTACAAT
CACCTGTACAATGCTATTTTTGACATACCTGAATTCTGGTCTGTTTGTTA
AAAGTTGTCAAGGTAGCATTATCTGCAATATTATAAAACTTGTCATTTTA
ATTGTTGATTTGACGGATCAAAGCCACCCCAGCGATCCTTGGTCAATATT
TTTTGTGTTGAGAATTTTGCTTCAGAACAAGGTTTTCCCCtaatacgaaa
aaaaaattcaaatttttgctaaACTTTGTAATTAGGGACTCACCAGTGAA
ATTAGGAATTTAACTTGTTTCAGATATAgtaaaaacttggaaaaaattcA
TTATATAAAgaattataatttttaattttctttcagcAAAAAATAACATT
ATTAAATCAGATTTATTAACAAAAGGGACTTAAACTTACAAATAAAATGG
CATCCAATAAATTTGAAGCGTGAGTAATTGATTCATTTGAAGAATCCAGG
CATTATATATTACATAATTAGAAAAACCGTATGATTTCTGATGATTGACT
ATTTTCGAAttcaagaaaatttgaatttatgaAGGATTTTTTTTAACAGT
AAAATAGGAATCCAGAATATTTTGAGAttaatttgattggcttctttttt
ctttcattgataACAAATGTGTAAttcatttctgattttttttaccAGAC
TGGCACGTGAAGATAGTAACGATAGTAGCAGCAAATCTGATGAAGGGGAA
GAAAATGGGGAGGtatgtttgttaaaaaaaatcaaagtatGACAATCGCT
GGCTTAGAAACTTGCATTCAGAATCCTGGGGGGTTTTAATGATAAGCAGG
GTGTGTACGTGgaggaaaaaatagaaaatggaagggtcattaaaaaagtt
ttttctttcccGTGTGCAAGAATTTCTTTGGAATTTATACTTCTATATTT
TTTTAGATCGGGTCAGATGATTCTGGCTCAAAAGAAGACCACAATAAAGT
GAGTTCATGGCTTTATGCGGTTCATTTGGTTGATATTCTTGATAGTCTTG
CATAAACTCTCATAGGAGTAAAATACACCGATTTTAAGGCCACCCTTTAA
ATAAAAGTATCTATGAAAGCCAAACAACAAAGTTTTTGGAATTGGTAGTT
GGCAATgtgtaaaaaagaaattagataCTGGATATTCATTACTCCTCACA
TTGCTCTAACTCTCTCTTTCTTTTAGTTCGTTTTCCCAGACGAGCCGTTC
GTAGAGAAAGGGGAGCACAAATTGCAATACTGTTATTGTTTATGGTTCTC
ACGCAAAAATCCTGGCAAACAACAACTTACTCAACAGAAATATGAAGACA
GCATCAAGCTGATCGGTGCTTTCTCTTCCGTAAGCTTAAAATAATTCTTT
AAACATAAAGACATGGACTTGCTGCCTATTAAGCAATATTTCCAGTGTTG
TATACCTTTTTGCTTTAGGGGAAAAATAGCCAGGATTTGTCTTTATTGtt
aaaattttgccaaaaattgtGTCACCAACTTGCTCAAGTTAAAAATAACT
CGTGGGCTTTCAGTTAGGGAAAATCCAAGGTTCCCTAAAAATAGTCAATC
AATTTAGTCATTTCAAGTTAAAAGGTATCTAATTGCGGTTAAAGTGCAAT
AAGACACCAGAAAATCATGAGGCATGGTTGATGACAAAGCCATGCAGAAG
ACCTGGAAGTAGTCCATTGTATGCtaagtttttattttctagGTGGAACA
ATTTTGGGCATATTACTCGTTCATGGTCCGACCAGGAGAATTGACAGGAC
ACAGTGATATTCATTTATTTAAACATGGCATAAGACCAATGTGGGAGGTA
TGTATATAGGCAATGAACCATCCCATCGAGTAGTCTAGCATACTAGACGT
CTAATAATTCAGActcaacgcaaaaaaaaaataaaaattataacgAACAA
GTTTTAGTATTTCATCCTGTTACGGTTTTTGTATTATTACATTACACCAA
TATAGCGGTATTACACAGATTAAAGACGGCTCCATGTTTCTAGGGAGTAT
TAGACCTTTCGAATCTCAATCGTTTTTACCCTGTACACATTTTGGGAGCG
AtttatttttttcggaaaataaaAATCCCTGTTTAAAGTAACATGTATTT
CTAAATGAGTGTATTCTTTATAATAATAGGACAAAGCAAACAAGAACGGT
GGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040677XLOC_040677Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064851-exon-scaffold_425-1491911889:305204..305255TCONS_00064851-exon-scaffold_425-1491911889:305204..305255Clytia hemisphaericaexon
TCONS_00064851-exon-scaffold_425-1510915933:305204..305255TCONS_00064851-exon-scaffold_425-1510915933:305204..305255Clytia hemisphaericaexon
TCONS_00064851-exon-scaffold_425-1575043694:305204..305255TCONS_00064851-exon-scaffold_425-1575043694:305204..305255Clytia hemisphaericaexon
TCONS_00064851-exon-scaffold_425-1491911889:314290..314372TCONS_00064851-exon-scaffold_425-1491911889:314290..314372Clytia hemisphaericaexon
TCONS_00064851-exon-scaffold_425-1510915933:314290..314372TCONS_00064851-exon-scaffold_425-1510915933:314290..314372Clytia hemisphaericaexon
TCONS_00064851-exon-scaffold_425-1575043694:314290..314372TCONS_00064851-exon-scaffold_425-1575043694:314290..314372Clytia hemisphaericaexon
TCONS_00064851-exon-scaffold_425-1491911889:314602..314665TCONS_00064851-exon-scaffold_425-1491911889:314602..314665Clytia hemisphaericaexon
TCONS_00064851-exon-scaffold_425-1510915933:314602..314665TCONS_00064851-exon-scaffold_425-1510915933:314602..314665Clytia hemisphaericaexon
TCONS_00064851-exon-scaffold_425-1575043694:314602..314665TCONS_00064851-exon-scaffold_425-1575043694:314602..314665Clytia hemisphaericaexon
TCONS_00064851-exon-scaffold_425-1491911889:314860..314901TCONS_00064851-exon-scaffold_425-1491911889:314860..314901Clytia hemisphaericaexon
TCONS_00064851-exon-scaffold_425-1510915933:314860..314901TCONS_00064851-exon-scaffold_425-1510915933:314860..314901Clytia hemisphaericaexon
TCONS_00064851-exon-scaffold_425-1575043694:314860..314901TCONS_00064851-exon-scaffold_425-1575043694:314860..314901Clytia hemisphaericaexon
TCONS_00064851-exon-scaffold_425-1491911889:315130..315282TCONS_00064851-exon-scaffold_425-1491911889:315130..315282Clytia hemisphaericaexon
TCONS_00064851-exon-scaffold_425-1510915933:315130..315282TCONS_00064851-exon-scaffold_425-1510915933:315130..315282Clytia hemisphaericaexon
TCONS_00064851-exon-scaffold_425-1575043694:315130..315282TCONS_00064851-exon-scaffold_425-1575043694:315130..315282Clytia hemisphaericaexon
TCONS_00064851-exon-scaffold_425-1491911889:315646..315750TCONS_00064851-exon-scaffold_425-1491911889:315646..315750Clytia hemisphaericaexon
TCONS_00064851-exon-scaffold_425-1510915933:315646..315750TCONS_00064851-exon-scaffold_425-1510915933:315646..315750Clytia hemisphaericaexon
TCONS_00064851-exon-scaffold_425-1575043694:315646..315750TCONS_00064851-exon-scaffold_425-1575043694:315646..315750Clytia hemisphaericaexon
TCONS_00064851-exon-scaffold_425-1491911889:316083..316107TCONS_00064851-exon-scaffold_425-1491911889:316083..316107Clytia hemisphaericaexon
TCONS_00064851-exon-scaffold_425-1510915933:316083..316107TCONS_00064851-exon-scaffold_425-1510915933:316083..316107Clytia hemisphaericaexon
TCONS_00064851-exon-scaffold_425-1575043694:316083..316107TCONS_00064851-exon-scaffold_425-1575043694:316083..316107Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_425supercontigscaffold_425:305204..316107 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
54.0916	54.9452	23.1046	24.5216	32.1569	38.7126	63.5078	64.916	54.1164	46.3007	49.5976	92.3242	48.4108	58.8301	56.5736	51.5418	66.0754	50.8336	38.415	46.8248	57.2964	65.0149	63.5946	64.9677	41.1256	45.8126	49.5789	52.2258	55.1114	43.6119
Blast
[Close]
BLAST of TCONS_00064851 vs. Swiss-Prot (Human)
Match: IF4E2 (Eukaryotic translation initiation factor 4E type 2 OS=Homo sapiens GN=EIF4E2 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 4.540e-34
Identity = 55/83 (66.27%), Postives = 64/83 (77.11%), Query Frame = 2 
Query:  275 GEHKLQYCYCLWFSRKNPGKQQLTQQKYEDSIKLIGAFSSVEQFWAYYSFMVRPGELTGHSDIHLFKHGIRPMWEDKANKNGG 523
             EH LQY Y  W+SR+ PG+   + Q YE +IK IG F+SVEQFW +YS MVRPG+LTGHSD HLFK GI+PMWED ANKNGG
Sbjct:   52 AEHPLQYNYTFWYSRRTPGRP-TSSQSYEQNIKQIGTFASVEQFWRFYSHMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGG 133
The following BLAST results are available for this feature:
BLAST of TCONS_00064851 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IF4E24.540e-3466.27Eukaryotic translation initiation factor 4E type 2... [more]
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