TCONS_00064867 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064867
Unique NameTCONS_00064867
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1422

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064867 ID=TCONS_00064867|Name=TCONS_00064867|organism=Clytia hemisphaerica|type=transcript|length=1422bp
ttaaaacaaaatggctgaatgCTATGTGCGAATGTTGTATACTTTCATTG
CAAAACACCAAGACGAATTGTCCTTTGATAAAGGAGGTGTTGAAGATTCT
CCGAAAACCGAATAAACACTGGTGGCTTGCTGTAAATCAAAACTATTCAA
TGCAAGGCTTGGCAGGTCTGGTACCGACTAATTATGTAAAAGAAATTCAA
GATGTTGTTAGCGAAAAAGTTGAAGGTTTTGGTACAGACAACAGTAACCC
TGATATAGTTCCTACTGACGAGGATAATTATATCTTGATGGCAAAGCAAG
GCACTGGCTCTAATGACGAACCTGAcaaggttttgaattttgagatgAAA
TATTCAACATGGGAAGTTACTTTATTGACTAGTGTGGGATCTGGGATGGA
GAATcgcagcagccaaaacaacaaaaagcagGACCAAATTTTTCATGAAG
GACACACTTTCGATTATGGGAAGACTGAAGACCAAGTGCAAATTACTCTA
TCAAACCCTAAAGAACTAATACTCACACACGATAGCTACATTAAGACAGT
GAACGATATGGAAGCATTAAAAACTTTTGAGGGATCCAATATACATCCAT
ACATTTATGTCGATAATCGTCTACTAAATCTGTCAATCGCCTTTTGGGGG
CCTGTAACCTGTGATAAAGAAATGGAAGTTTCTTTTGCCAGCCGTAAGGA
TGCAGAAATTGTGTTATCAGGTGAAAGAGAAGGATCGTTTTTGTTGCGTG
AAAGCGAAAGCAGCCCTGGTGACCTTACCCTTTCCATGAGACGAGGAGAA
AAGATCATACACGTCTGGATTGGAAAATCAGAAGAACAATTTATTTACAG
CGAACCTCGTCGGTTTGAATCGATTGAAGAAATCATCGAGGTTTATCATA
GAAGCAACCTTGTTTCAAAAAGAGGCCAAACTATTCGACTTTGGCGAAGC
GCTGAGAAGAAACACATCACAGATGATTATAATTCGTTTGAGAAGAAATC
ATATGGCATGGTCAAGATGTCACAAGAAGCCTGCGAAGATAAATTGATCG
ATAGTGTTAAAGGGGCTTTCTTGGTCCGCAAAATAGACAAGGAATTTGAA
GAGaagAAGTGGATATTATCGGTGAAATTTCATTTACACGTCGAACATTT
TCTCATTGAGCTCAATAAAGAGTTTCCAACGCACAAGTTCGTATTTGGTG
AGTATTCTTCAAATGGAAATATACATGAGGTGGTTCAAAGACTTCTTCAA
GAACCTGTAACAGACTTTATACCGTCTGAAAGAAGACACTAAAAAGGACC
GTTAGTTCTTTACTTCGTTTATGGTACTCATCCAATTCGTGGAACTCGAT
TATTGACCATTACTGATACACTGTTGGAATCAGCTCTCTTGAAGTTGAAA
TAATTAGGAAGCAGTGCTTCGT
Run BLAST on NCBI

protein sequence of TCONS_00064867-protein

>TCONS_00064867-protein ID=TCONS_00064867-protein|Name=TCONS_00064867-protein|organism=Clytia hemisphaerica|type=polypeptide|length=429bp
KTKWLNAMCECCILSLQNTKTNCPLIKEVLKILRKPNKHWWLAVNQNYSM
QGLAGLVPTNYVKEIQDVVSEKVEGFGTDNSNPDIVPTDEDNYILMAKQG
TGSNDEPDKVLNFEMKYSTWEVTLLTSVGSGMENRSSQNNKKQDQIFHEG
HTFDYGKTEDQVQITLSNPKELILTHDSYIKTVNDMEALKTFEGSNIHPY
IYVDNRLLNLSIAFWGPVTCDKEMEVSFASRKDAEIVLSGEREGSFLLRE
SESSPGDLTLSMRRGEKIIHVWIGKSEEQFIYSEPRRFESIEEIIEVYHR
SNLVSKRGQTIRLWRSAEKKHITDDYNSFEKKSYGMVKMSQEACEDKLID
SVKGAFLVRKIDKEFEEKKWILSVKFHLHVEHFLIELNKEFPTHKFVFGE
YSSNGNIHEVVQRLLQEPVTDFIPSERRH
Run BLAST on NCBI

transcript from alignment at scaffold_425:443163..449136+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064867 ID=TCONS_00064867|Name=TCONS_00064867|organism=Clytia hemisphaerica|type=transcript|length=5974bp|location=Sequence derived from alignment at scaffold_425:443163..449136+ (Clytia hemisphaerica)
ttaaaacaaaatggctgaatgCTATGTGCGAATGTTGTATACTTTCATTG CAAAACACCAAGACGAATTGTCCTTTGATAAAGGAGGTGTTGAAGATTCT CCGAAAACCGAATAAACACTGGTGGCTTGCTGTAAATCAAAACTATTCAA TGCAAGGCTTGGCAGGTCTGGTACCGACTAATTATGTAAAAGAAATTCAA GATGTTGTTAGCGAAAAAGTTGAAGGTTTTGGTACAGACAACAGTAACCC TGATATAGTTCCTACTGACGAGGATAATTATATCTTGATGGCAAAGCAAG GCACTGGCTCTAATGACGAACCTGAcaaggttttgaattttgagatgAAA TATTCAACATGGGAAGTTACTTTATTGACTAGTGTGGGATCTGGGATGGA GAATcgcagcagccaaaacaacaaaaagcagGACCAAATTTTTCATGAAG GACACACTTTCGATTATGGGAAGACTGAAGACCAAGTGCAAATTACTCTA TCAAACCCTAAAGAACTAATACTCACACACGATAGCTACATTAAGACAGT GAACGATATGGAAGCATTAAAAACTTTTGAGGGATCCAATATACATCCAT ACATTTATGTCGATAATCGTCTACTAAATCTGTCAATCGCCTTTTGGGGG CCTGTAACCTGTGATAAAGAAATGGAAGTTTCTTTTGCCAGCCGTAAGGA TGCAGAAATTGTGTTATCAGGTGAAAGAGAAGGATCGTTTTTGTTGCGTG AAAGCGAAAGCAGCGTGAGTAATACGATTTCTTTTATCCTACATTTGAgt ttaaatctcaaaaaatttctttccctTTCAAaaccccttctcatagaccc ggtGTAAATTTTTCAGCAAGTGGGGGGTAATAACAACCGACTAAAACTCG CTGagaattgatattcccatgtttttctTGGCTAAttattttcaagtcag aaaattctgTGGAGATTGAAAACCTACAATATACAAATATAAAATAGTGA GGATCTGTTTATTTCATTAGTTTTTAAGCGGGACAACATTTGGGGCGATA TTTTGGGCAATTTTtcatcctaccgggtctgtgagaaggttggcaaacga tatcatactccaggatgcatcgtctcttattttccccctattttctactt tcctatcttctatcctgattttctgtcgttctcaagtgtttctaactgtt ttctaagtatttttctgaaatctgcCCGAAAAATTTCCGACACTTAGAGG GACTACTTTGAATTCAAAGAGTAAGGGTTTTTAAAGGGTAAATTTGAAGG AAAGTGAATTGATAATATGCGAGTTGCAAGTTGGTCTTGCAAGTTActca actcgcaactcgcgattttattttcttaaaaatgcaactcgtaaaaagta actcgtaaaaagtaactcgcaaCCCGCATATCTGATATCAACTCGTAACT TGCAACTCGCTTAATACAAATTCACGAAGGAAATACCTATAACATTACGT TTTTCAGCCTGGTGACCTTACCCTTTCCATGAGACGAGGAGAAAAGATCA TACACGTCTGGATTGGAAAATCAGAAGAACAATTTATTTACAGCGAACCT CGTCGGTTTGAATCGATTGAAGAAATCATCGAGGTTTATCATAGAAGCAA CCTTGTTTCAAAAAGAGGCCAAACTATTCGACTTTGGCGAAGCGCTGAGA AGAAACACATCACAGATGATTATAATTCGTTTGAGAAGAAATCATATGGC ATGGTCAAGATGTCACAAGAAGCCTGCGAAGATAAATTGATCGATAGTGT TAAAGGGGCTTTCTTGGTCCGCAAAATAGACAAGGAATTTGAAGAGGTAG GAAATTCCGATTGTACagccccaagatgtgacccctGCCCTAATATGTGA AACCTGCCCTAAGATGTGACCCGATTGCCCCAAGATGTGAAACCTGCCCT AAGATGTGACCCCACTTGCCCTAAGATGTGACCCCGcttgccccaagatg tgaccccaAAAAGCAGCTATAAGATGTGACCCACTCCCaggtgggggggg ggtactagggttggtgaatgaggggtatgtgtggacgggacctccgaaaa tcgacccttagagagaccaaattttagtgaaaaagtgacccttagagaga ctttttcgaaaattgttctctgattttcaaaaatttcctaccctcagtga gacttttttgtaattttttctctcaaaatcaagatttttttctaaggtga aaaacccgacccttaccgtccgcacatacccagcacctatttttgcctaa gtacccccccccccgggggtccccccccccccccggggaccCACTTGGCC CAAGATGTGACCCCAGAAAAAATCTGGTGGATTTGATGGGTCTGGTGAAT CTGCTGATGGACTTGATGGATATGATGAATctgctggtggagttgatggt tttggtaaATCTGCTGGtagagttgatggttttggtgaatctgCTGGTAG AGTTGATGGTTTAGGTGAATctgatggtggagttgatggttttggggAAT CTTCtgatggagttgatggttctggtgaatatgcttgtggatttgatggt tctggtgaatgtgcttgtggatttgatggttctggttaatCAGCTGGTgg atttgatggttctggtgaatatgcttgtggatttgatggttctggtgaat gtgcttgtggatttgatggttctggttaatCAGCTGGTggatttgatggt tctggtgaatatgctgctggagttgatggttctggggAATctgctggtgg agttgatggttttggtgaatgtgctggtggagttgatggttttggggAAT CTTCtgatggagttgatggttctggtgaatatgctgccggagttgatggt tctggtgaatgtgctggtggagttgatggttttggtgaatctgctggtgg agttgatggttttggggAATCTTCtgatggagttgatggttctggtgaat atgctgccggagttgatggttctggtgaatgtgctggtggagttgatggt tttggtgaatctgctggtggagttgatggttttggggAATCTTCtgatgg agttgatggttctggtgaatatgctgccggagttgatggttctggtgaat gtgctggtggagttgatggttttggtgaatctgctgctggagttgatggt tctggggAATctgctggtggagttgatggttttggtgaatctgctggtgg agttgatggttttggggAATCTTCtgatggagttgatggttctggtgaat atgctgccggagttgatggttctggggAATctgctggtggagttgatggt tttggggAATCTTCtgatggagttgatggttctggtgaatatgctgccgg agttgatggttctggtgaatgtgcttgtggatttgatggttctggttaat CAGCTGGTggatttgatggttctggtgaatatgctgctggagttgatggt tctggggAATCTGCTGGTgaagttgatggttttggtgaatgtgctggtgg atttgatggttctggtgaatatgctgCTGGAGTTGATGTTTCTGGTGAAC TtgctggtggagttgatggttctggtgaatatgctaCCGGAGTTGTTGGC TTTAGTGAATCTGCTGGTGgatttgatggttttggtgaacttgctggtgg agttgatggttctagTGATTCTGCTAGTGAAGGTGATGGTTCAGATAAAT ATGCTGGTggatttgatggttctggtgattcTGCTAGTGAAggtgatggt tctggtgaatcagtatgagttgatggttctggtgaatctgcggatgggtt tttttgatggttttttgacATGAatgatcgaattagagaaaatttatcat ttttacaGATATTTTAACTCGAAATTATGTACACAAGTATTCTACTTTCC AGGAAAAATTTTGGGGGCCATTCATAACATAGTGAGAAAAATAGTGTAGT AGTTTGTCCATAAGTAAATTTTCACATTTCCTTTCATATATTTCTCTGAA AATTCTTTGCatctttgaattcaaaatttgtcattgtTAACCTATAAAAG CTTCGAAAATTTCTGACAGCCCACAGAAAATCGAATTAGGAAGAGAAGAT TGctgaaaagacaaaaaaattgttagaattataaaaagtttcgaataaca gaggtttgaattatagaaatttCACCAGCCGATTTACCAGAACTTTCAAA TCCACCAGCAGAATtaccagaaccatcaaatcactcagcagattcaccag aaccatcaactccatcaGCAGATTCCCCAAAACCATCAACTACACAAGCA agttcaccagaaccatcaaacCCACCAACAGATTCACCTAAACCATCAAA TCCACCagtatattcaccagaaccatcaactccaccagtaCATTTACCAA AACCTATAATTTCCCAGTGATTTTTTTTGGGGTCACATGTTGGGGCGAGT GGGTCACATCTTAGGGCAGCCTTTCGGCTCAGATCTTGGGGCTGTACACC GATTTTCCAGGGCAGGGCATCGAAAACATATAATGTGTGTTTGCTTAGGT TTCACTCTTCCGCCTACAATCATGGACCCTTTTGGCCATGTGATCAAAAT AAAGAGCTCAAATGTAATCACACGTATACAATCACGGACGAAAGGTTGTA GACTCAAAAAAAGCatgaaaaatttggaaataagcTCTTTGCCtctaaaa acccatttttaacagagccaatgttgtttttattggatttgaagagtttg aGTGACAAGTCCAGAAGCCAAATACACTCGAcattttgaaggaatttttt tcaaagttttcagaCCTTTTTTTCTGAGATTGAAGGTTGAATGAGTTTTg ctcttcaactttttcgagaAAACATCTAATAAGACCATATTTGAGATGGC TTAATCAATTATAAACAGCTTTTCAGAGATGATCTCTGGTGCGCCCACCA CCTGTGTGGCTGAAGTTTACCCATTTTCAGTCATTGAAGTCTTTGAATCC CAAAATCACGAAGATTAAAGCCATATGGAATGCTAGCGAGTCTGTGTAGG TGTCTTCTGccaaataatcacttgtggtacATTTGGGGGAATTTCCCAAG TGTCAAGGAGGCTTTTCTCGGCACTATTTAggagtttttgaaaattctac aGACCTTCTGTCCATGATTGTAAGCGGAAGAGTTAAACCTAAGCAATAAA GGCTCTACGTATTCAAGTACTCATGACTTAGCCAAAAAGGTCGAGCACTT TAATGACACTTGCTATTTAAGGGAAGAAactttggcgggaatttaatttg acggatggcggttttttaaatctaaaatcAGGGTGAAAACATTGATATCG GGGGTAAATTGTGAACAATAAAAggacataaaaagaaaaaaattaaattt ggcggaaattTAATTTAGCAGATTGCCGAAAAAATTTAAtatggcgggaa cttaatttggcggatttcagacAAACtcaccaaatccgccaaattttctt cccgccaaaattttttcccttaaggtatgaGGTTCTCAACCATGTTAGCG ATTAATCTCATTTGCGCTATTCCATATTCAACTAAAAGagtgttttattt ttcagaagAAGTGGATATTATCGGTGAAATTTCATTTACACGTCGAACAT TTTCTCATTGAGCTCAATAAAGAGTTTCCAACGCACAAGTTCGTATTTGG TGAGTATTCTTCAAATGGAAATATACATGAGGTGGTTCAAAGACTTCTTC AAGAACCTGTAACAGACTTTATACCGTCTGAAAGAAGACACTAAAAAGGA CCGTTAGTTCTTTACTTCGTTTATGGTACTCATCCAATTCGTGGAACTCG ATTATTGACCATTACTGATACACTGTTGGAATCAGCTCTCTTGAAGTTGA AATAATTAGGAAGCAGTGCTTCGT

Coding sequence (CDS) from alignment at scaffold_425:443163..449136+

>TCONS_00064867 ID=TCONS_00064867|Name=TCONS_00064867|organism=Clytia hemisphaerica|type=CDS|length=3870bp|location=Sequence derived from alignment at scaffold_425:443163..449136+ (Clytia hemisphaerica)
aaaacaaaatggctgaatgCTATGTGCGAATGTTGTATACTTTCATTGCA
AAACACCAAGACGAATTGTCCTTTGATAAAGGAGGTGTTGAAGATTCTCC
GAAAACCGAATAAACACTGGTGGCTTGCTGTAAATCAAAACTATTCAATG
CAAGGCTTGGCAGGTCTGGTACCGACTAATTATGTAAAAGAAATTCAAGA
TGTTGTTAGCGAAAAAGTTGAAGGTTTTGGTACAGACAACAGTAACCCTG
ATATAGTTCCTACTGACGAGGATAATTATATCTTGATGGCAAAGCAAGGC
ACTGGCTCTAATGACGAACCTGAcaaggttttgaattttgagatgAAATA
TTCAACATGGGAAGTTACTTTATTGACTAGTGTGGGATCTGGGATGGAGA
ATcgcagcagccaaaacaacaaaaagcagGACCAAATTTTTCATGAAGGA
CACACTTTCGATTATGGGAAGACTGAAGACCAAGTGCAAATTACTCTATC
AAACCCTAAAGAACTAATACTCACACACGATAGCTACATTAAGACAGTGA
ACGATATGGAAGCATTAAAAACTTTTGAGGGATCCAATATACATCCATAC
ATTTATGTCGATAATCGTCTACTAAATCTGTCAATCGCCTTTTGGGGGCC
TGTAACCTGTGATAAAGAAATGGAAGTTTCTTTTGCCAGCCGTAAGGATG
CAGAAATTGTGTTATCAGGTGAAAGAGAAGGATCGTTTTTGTTGCGTGAA
AGCGAAAGCAGCCCTGGTGACCTTACCCTTTCCATGAGACGAGGAGAAAA
GATCATACACGTCTGGATTGGAAAATCAGAAGAACAATTTATTTACAGCG
AACCTCGTCGGTTTGAATCGATTGAAGAAATCATCGAGGTTTATCATAGA
AGCAACCTTGTTTCAAAAAGAGGCCAAACTATTCGACTTTGGCGAAGCGC
TGAGAAGAAACACATCACAGATGATTATAATTCGTTTGAGAAGAAATCAT
ATGGCATGGTCAAGATGTCACAAGAAGCCTGCGAAGATAAATTGATCGAT
AGTGTTAAAGGGGCTTTCTTGGTCCGCAAAATAGACAAGGAATTTGAAGA
GaagAAGTGGATATTATCGGTGAAATTTCATTTACACGTCGAACATTTTC
TCATTGAGCTCAATAAAGAGTTTCCAACGCACAAGTTCGTATTTGGTGAG
TATTCTTCAAATGGAAATATACATGAGGTGGTTCAAAGACTTCTTCAAGA
ACCTGTAACAGACTTTATACCGTCTGAAAGAAGACACTAAaaaacaaaat
ggctgaatgCTATGTGCGAATGTTGTATACTTTCATTGCAAAACACCAAG
ACGAATTGTCCTTTGATAAAGGAGGTGTTGAAGATTCTCCGAAAACCGAA
TAAACACTGGTGGCTTGCTGTAAATCAAAACTATTCAATGCAAGGCTTGG
CAGGTCTGGTACCGACTAATTATGTAAAAGAAATTCAAGATGTTGTTAGC
GAAAAAGTTGAAGGTTTTGGTACAGACAACAGTAACCCTGATATAGTTCC
TACTGACGAGGATAATTATATCTTGATGGCAAAGCAAGGCACTGGCTCTA
ATGACGAACCTGAcaaggttttgaattttgagatgAAATATTCAACATGG
GAAGTTACTTTATTGACTAGTGTGGGATCTGGGATGGAGAATcgcagcag
ccaaaacaacaaaaagcagGACCAAATTTTTCATGAAGGACACACTTTCG
ATTATGGGAAGACTGAAGACCAAGTGCAAATTACTCTATCAAACCCTAAA
GAACTAATACTCACACACGATAGCTACATTAAGACAGTGAACGATATGGA
AGCATTAAAAACTTTTGAGGGATCCAATATACATCCATACATTTATGTCG
ATAATCGTCTACTAAATCTGTCAATCGCCTTTTGGGGGCCTGTAACCTGT
GATAAAGAAATGGAAGTTTCTTTTGCCAGCCGTAAGGATGCAGAAATTGT
GTTATCAGGTGAAAGAGAAGGATCGTTTTTGTTGCGTGAAAGCGAAAGCA
GCCCTGGTGACCTTACCCTTTCCATGAGACGAGGAGAAAAGATCATACAC
GTCTGGATTGGAAAATCAGAAGAACAATTTATTTACAGCGAACCTCGTCG
GTTTGAATCGATTGAAGAAATCATCGAGGTTTATCATAGAAGCAACCTTG
TTTCAAAAAGAGGCCAAACTATTCGACTTTGGCGAAGCGCTGAGAAGAAA
CACATCACAGATGATTATAATTCGTTTGAGAAGAAATCATATGGCATGGT
CAAGATGTCACAAGAAGCCTGCGAAGATAAATTGATCGATAGTGTTAAAG
GGGCTTTCTTGGTCCGCAAAATAGACAAGGAATTTGAAGAGaagAAGTGG
ATATTATCGGTGAAATTTCATTTACACGTCGAACATTTTCTCATTGAGCT
CAATAAAGAGTTTCCAACGCACAAGTTCGTATTTGGTGAGTATTCTTCAA
ATGGAAATATACATGAGGTGGTTCAAAGACTTCTTCAAGAACCTGTAACA
GACTTTATACCGTCTGAAAGAAGACACTAAaaaacaaaatggctgaatgC
TATGTGCGAATGTTGTATACTTTCATTGCAAAACACCAAGACGAATTGTC
CTTTGATAAAGGAGGTGTTGAAGATTCTCCGAAAACCGAATAAACACTGG
TGGCTTGCTGTAAATCAAAACTATTCAATGCAAGGCTTGGCAGGTCTGGT
ACCGACTAATTATGTAAAAGAAATTCAAGATGTTGTTAGCGAAAAAGTTG
AAGGTTTTGGTACAGACAACAGTAACCCTGATATAGTTCCTACTGACGAG
GATAATTATATCTTGATGGCAAAGCAAGGCACTGGCTCTAATGACGAACC
TGAcaaggttttgaattttgagatgAAATATTCAACATGGGAAGTTACTT
TATTGACTAGTGTGGGATCTGGGATGGAGAATcgcagcagccaaaacaac
aaaaagcagGACCAAATTTTTCATGAAGGACACACTTTCGATTATGGGAA
GACTGAAGACCAAGTGCAAATTACTCTATCAAACCCTAAAGAACTAATAC
TCACACACGATAGCTACATTAAGACAGTGAACGATATGGAAGCATTAAAA
ACTTTTGAGGGATCCAATATACATCCATACATTTATGTCGATAATCGTCT
ACTAAATCTGTCAATCGCCTTTTGGGGGCCTGTAACCTGTGATAAAGAAA
TGGAAGTTTCTTTTGCCAGCCGTAAGGATGCAGAAATTGTGTTATCAGGT
GAAAGAGAAGGATCGTTTTTGTTGCGTGAAAGCGAAAGCAGCCCTGGTGA
CCTTACCCTTTCCATGAGACGAGGAGAAAAGATCATACACGTCTGGATTG
GAAAATCAGAAGAACAATTTATTTACAGCGAACCTCGTCGGTTTGAATCG
ATTGAAGAAATCATCGAGGTTTATCATAGAAGCAACCTTGTTTCAAAAAG
AGGCCAAACTATTCGACTTTGGCGAAGCGCTGAGAAGAAACACATCACAG
ATGATTATAATTCGTTTGAGAAGAAATCATATGGCATGGTCAAGATGTCA
CAAGAAGCCTGCGAAGATAAATTGATCGATAGTGTTAAAGGGGCTTTCTT
GGTCCGCAAAATAGACAAGGAATTTGAAGAGaagAAGTGGATATTATCGG
TGAAATTTCATTTACACGTCGAACATTTTCTCATTGAGCTCAATAAAGAG
TTTCCAACGCACAAGTTCGTATTTGGTGAGTATTCTTCAAATGGAAATAT
ACATGAGGTGGTTCAAAGACTTCTTCAAGAACCTGTAACAGACTTTATAC
CGTCTGAAAGAAGACACTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040684XLOC_040684Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064867-proteinTCONS_00064867-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064867-exon-scaffold_425-1491911889:443163..443926TCONS_00064867-exon-scaffold_425-1491911889:443163..443926Clytia hemisphaericaexon
TCONS_00064867-exon-scaffold_425-1510915933:443163..443926TCONS_00064867-exon-scaffold_425-1510915933:443163..443926Clytia hemisphaericaexon
TCONS_00064867-exon-scaffold_425-1575043694:443163..443926TCONS_00064867-exon-scaffold_425-1575043694:443163..443926Clytia hemisphaericaexon
TCONS_00064867-exon-scaffold_425-1491911889:444670..445008TCONS_00064867-exon-scaffold_425-1491911889:444670..445008Clytia hemisphaericaexon
TCONS_00064867-exon-scaffold_425-1510915933:444670..445008TCONS_00064867-exon-scaffold_425-1510915933:444670..445008Clytia hemisphaericaexon
TCONS_00064867-exon-scaffold_425-1575043694:444670..445008TCONS_00064867-exon-scaffold_425-1575043694:444670..445008Clytia hemisphaericaexon
TCONS_00064867-exon-scaffold_425-1491911889:448818..449136TCONS_00064867-exon-scaffold_425-1491911889:448818..449136Clytia hemisphaericaexon
TCONS_00064867-exon-scaffold_425-1510915933:448818..449136TCONS_00064867-exon-scaffold_425-1510915933:448818..449136Clytia hemisphaericaexon
TCONS_00064867-exon-scaffold_425-1575043694:448818..449136TCONS_00064867-exon-scaffold_425-1575043694:448818..449136Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_425supercontigscaffold_425:443163..449136 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.0570427 0.033116 0.0323988 10.2156 6.91929 0.300823 1.51374 0.0492933 0.427404 0 0.019479 3.5986 1.25246 0.0332159 0 0.0658689 0.0225045 6.31151 7.38538 0.0282786 0 0 0 0 0.0560514 0.0401047 0 0.0324629 0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000980SH2
IPR001452SH3_domain
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064867 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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