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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00065130 ID=TCONS_00065130|Name=TCONS_00065130|organism=Clytia hemisphaerica|type=transcript|length=523bp
GTAGGCCAAAGTGTGAAACAAAGGTAAGAAGTAAAGACTTGGCGATGAAT
ATGCGTCAATAATGCTAAAGAGGCCCTGCAATGATCATAAAATCGAAAAA
CGTATTGCGAGCCCAGCGGACGGAACCGAAACATCAATTCTCTGCAATGT
CAAAGACGTGTGGAGAAAACTTATCACAGAATGAACATCGTCTCATCAGA
AGACAAAGAAATAAATGctaCTCAACAAACGGAAAGTGGCAGCAATATAA
TCAACAAACTGTTGCCAGAATGCATGACCGATGAGGAGAAAGAAGATGCG
GGTGAATGTGAAGAAGAAGTATATAAGACTCGACCTGTGCCGTGGCTGAT
AAATGAAGTAGTCGCACAAAGTGCCACGAGAATTTTAAATCgactaattt
ttcttttttatttattattttgatatttatttttctactaacattttgta
aaaattttgtaaaaatatttaaccTACAATCTGTATAATACTTTCTAAAG
TAATTCAAGAAATGAACTATTAC Run BLAST on NCBI transcript from alignment at scaffold_431:20844..21981- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00065130 ID=TCONS_00065130|Name=TCONS_00065130|organism=Clytia hemisphaerica|type=transcript|length=1138bp|location=Sequence derived from alignment at scaffold_431:20844..21981- (Clytia hemisphaerica)
GTAGGCCAAAGTGTGAAACAAAGGTAAGAAGTAAAGACTTGGCGATGAAT
ATGCGTCAATAATGCTAAAGAGGCCCTGCAATGATCATGTAAGTACACTT
TTTTAGTTATTTTTGGAATAACCTGTCTAAAACGCATAATTTCTTTCTTT
CATCAAGTTATTTTCAATTTTAAATAAAGATAAAGGGCAATCAATCTGTT
TGATAATCTTGTTTAAGAAGTAGAGTATAATTTTATCATTTTCTCTCAAC
AGAAAATCGAAAAACGTATTGCGAGCCCAGCGGACGGAACCGAAACATCA
ATTCTCTGCAATGTCAAAGACGTGTGGAGAAAACTTATCACAGAATGAAC
ATCGTCTCATCAGAAGACAAAGAAATAAATGGTAATAAGAAAAGGAAATA
AATATAATAACAAATTTGTTTCATCCAAACTAGCTGAAAGTCCTACCGGG
TCTATGAGAAAGGGGTGTCAAAAATTCTAGTTCTTCTTCTTTGCGAGTGT
TTCTATAAAATATGCTGTGTTCAGGAGCTATAAAATTCTTCATTTTTAAT
TATTTTCTGGTCGGTACATGATCAAATATTTTTGATTTTATAGGATTACT
AAATAAAATTGACATAAAATAGCATAATATTAAGACAAATTAGCATAAAA
TATCATAAAAGAATTTGGAAATTTTGGCTGAGAGTCCCGCATGGACATTT
CTTTCCTTCTTCTTAAAATGGTTGGGATTTGTAATTGTAATGAAGTTTTT
TCTCTCAGAGCACTAATTCAATTCAATTCAATTTTAATAATTCAAGTGAC
TCTTTAATAATAACCTATTTTTCTTTTTTTAGCTACTCAACAAACGGAAA
GTGGCAGCAATATAATCAACAAACTGTTGCCAGAATGCATGACCGATGAG
GAGAAAGAAGATGCGGGTGAATGTGAAGAAGAAGTATATAAGACTCGACC
TGTGCCGTGGCTGATAAATGAAGTAGTCGCACAAAGTGCCACGAGAATTT
TAAATCGACTAATTTTTCTTTTTTATTTATTATTTTGATATTTATTTTTC
TACTAACATTTTGTAAAAATTTTGTAAAAATATTTAACCTACAATCTGTA
TAATACTTTCTAAAGTAATTCAAGAAATGAACTATTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00065130-exon-scaffold_431-1575043694:21894..21981 | TCONS_00065130-exon-scaffold_431-1575043694:21894..21981 | Clytia hemisphaerica | exon |
| TCONS_00065130-exon-scaffold_431-1575043694:21601..21729 | TCONS_00065130-exon-scaffold_431-1575043694:21601..21729 | Clytia hemisphaerica | exon |
| TCONS_00065130-exon-scaffold_431-1575043694:20844..21149 | TCONS_00065130-exon-scaffold_431-1575043694:20844..21149 | Clytia hemisphaerica | exon |
| TCONS_00065130-exon-scaffold_431-1510915933:21894..21981 | TCONS_00065130-exon-scaffold_431-1510915933:21894..21981 | Clytia hemisphaerica | exon |
| TCONS_00065130-exon-scaffold_431-1510915933:21601..21729 | TCONS_00065130-exon-scaffold_431-1510915933:21601..21729 | Clytia hemisphaerica | exon |
| TCONS_00065130-exon-scaffold_431-1510915933:20844..21149 | TCONS_00065130-exon-scaffold_431-1510915933:20844..21149 | Clytia hemisphaerica | exon |
| TCONS_00065130-exon-scaffold_431-1491911889:21894..21981 | TCONS_00065130-exon-scaffold_431-1491911889:21894..21981 | Clytia hemisphaerica | exon |
| TCONS_00065130-exon-scaffold_431-1491911889:21601..21729 | TCONS_00065130-exon-scaffold_431-1491911889:21601..21729 | Clytia hemisphaerica | exon |
| TCONS_00065130-exon-scaffold_431-1491911889:20844..21149 | TCONS_00065130-exon-scaffold_431-1491911889:20844..21149 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_431 | supercontig | scaffold_431:20844..21981 - |
Blast
The following BLAST results are available for this feature:
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