TCONS_00065304 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065304
Unique NameTCONS_00065304
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length329

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065304 ID=TCONS_00065304|Name=TCONS_00065304|organism=Clytia hemisphaerica|type=transcript|length=329bp
GGGAACTTGGGGTTCATCTAAAACAATGTAAAGTGAATTGCCAACGAAAA
GGTAATTCAGGGTGTAGCCCTGTCGTGAAAGGTTATAAGTTCAGTTTATG
TGGACATGGTTATAATCCGAACTGTACACCGACCCGAACCGGAGATCCAC
CTGTGGCACATTGCGAGTTGGGCTGTGACAGTTTCTTCAAATAAATATAA
AACACTATTTGTAGATCGCACTTGACATCATATTGGAGATAGATCGATAG
TTGTTGAAGGATTTCTCGATTGTTGAGTCGACTCTAACGTTGGACAAATG
TCGTTACTTCGAATGTTGATTCATTTACG
Run BLAST on NCBI

transcript from alignment at scaffold_435:28724..29052

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065304 ID=TCONS_00065304|Name=TCONS_00065304|organism=Clytia hemisphaerica|type=transcript|length=329bp|location=Sequence derived from alignment at scaffold_435:28724..29052 (Clytia hemisphaerica)
CGTAAATGAATCAACATTCGAAGTAACGACATTTGTCCAACGTTAGAGTC
GACTCAACAATCGAGAAATCCTTCAACAACTATCGATCTATCTCCAATAT
GATGTCAAGTGCGATCTACAAATAGTGTTTTATATTTATTTGAAGAAACT
GTCACAGCCCAACTCGCAATGTGCCACAGGTGGATCTCCGGTTCGGGTCG
GTGTACAGTTCGGATTATAACCATGTCCACATAAACTGAACTTATAACCT
TTCACGACAGGGCTACACCCTGAATTACCTTTTCGTTGGCAATTCACTTT
ACATTGTTTTAGATGAACCCCAAGTTCCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040941XLOC_040941Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065304-exon-scaffold_435-1491911889:28724..29052TCONS_00065304-exon-scaffold_435-1491911889:28724..29052Clytia hemisphaericaexon
TCONS_00065304-exon-scaffold_435-1510915933:28724..29052TCONS_00065304-exon-scaffold_435-1510915933:28724..29052Clytia hemisphaericaexon
TCONS_00065304-exon-scaffold_435-1575043694:28724..29052TCONS_00065304-exon-scaffold_435-1575043694:28724..29052Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_435supercontigscaffold_435:28724..29052 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.398683	0.315045	0	0.355834	0.249128	0.308585	0	0.590678	0.393238	3.06286	0	0.180153	0.665801	0.227475	1.25708	1.6443	0.571678	0	0.338972	0.308175	1.58706	0.283283	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065304 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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