TCONS_00065332 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065332
Unique NameTCONS_00065332
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length172

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065332 ID=TCONS_00065332|Name=TCONS_00065332|organism=Clytia hemisphaerica|type=transcript|length=172bp
AAAAGTGGTGCTGTGAACTCGTTTAAAGATTTCGAGCTCGTTTACCTAAA
CTCCGTTTTACCAAACCAAGTGCAATCGTATCATTTCCAAATATGGAATT
GTGATAATGAGAGCGTCAGTTTTTGGAGTAATGTGGAGAACTCGTTcgtc
gaaaaatattttacattggAAC
Run BLAST on NCBI

transcript from alignment at scaffold_437:77781..77952

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065332 ID=TCONS_00065332|Name=TCONS_00065332|organism=Clytia hemisphaerica|type=transcript|length=172bp|location=Sequence derived from alignment at scaffold_437:77781..77952 (Clytia hemisphaerica)
GTTccaatgtaaaatatttttcgacgAACGAGTTCTCCACATTACTCCAA
AAACTGACGCTCTCATTATCACAATTCCATATTTGGAAATGATACGATTG
CACTTGGTTTGGTAAAACGGAGTTTAGGTAAACGAGCTCGAAATCTTTAA
ACGAGTTCACAGCACCACTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040966XLOC_040966Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065332-exon-scaffold_437-1491911889:77781..77952TCONS_00065332-exon-scaffold_437-1491911889:77781..77952Clytia hemisphaericaexon
TCONS_00065332-exon-scaffold_437-1510915933:77781..77952TCONS_00065332-exon-scaffold_437-1510915933:77781..77952Clytia hemisphaericaexon
TCONS_00065332-exon-scaffold_437-1575043694:77781..77952TCONS_00065332-exon-scaffold_437-1575043694:77781..77952Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_437supercontigscaffold_437:77781..77952 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065332 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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