TCONS_00065356 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065356
Unique NameTCONS_00065356
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length721

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065356 ID=TCONS_00065356|Name=TCONS_00065356|organism=Clytia hemisphaerica|type=transcript|length=721bp
AAACTGTTCCAAACTTACTTCAGAAAATACGTTAGAATCATCTCATAATG
TGTTGGTGTCATTATTATGAAATTCGGATGCTGTAATTGTCAATGGTTTT
GTCATCTACTTATCACATTATGAAAACAGAGtaAAATTGAAGAGACAACG
CACAAGACGTGATGGTTACATTGAAGattgatttttgattcatttGTACA
TCTGAAGAAACTTCAAAATACACCTTGATCAATAACAAAAAACACCAGCA
AACAAAACCACTATAAATATGTTAGATGCAGACGTATATCAACACTATAT
CAGGACACGCTAGATCATCGACAACTTGCACTCGTTTGGTTTAACAACAA
ACCAACATGAAGTTGATCATCGTCTTAGCTGCTTGCTTAGCATGTACTTT
TGCAGtcAACCCATTGGatcaagctaaaaagTGTTTGTCTGAGCACAATG
CATGCATCAAGAAATTGGAAAGCCAAGGAGTGGACTTCTTCCAATCTCGA
TCGAGATGTGGTGCATGGTTCATTAAATGTGGTATGGAACCTGGATGTAT
CGAAAAGTGCAACAAGTCAGCGTTAGCTTGCTTACAAAAGGATGTTAAAA
GTACCATCTGTTTGGAAGACGGGGGTAAATGCTACATGAAATGTAAAGCC
TACACCAAGTAAACTAACCATCTTtaattattattgtttttatgaaataa
tATAACAAATTTTTAAACTCT
Run BLAST on NCBI

transcript from alignment at scaffold_439:287898..306720+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065356 ID=TCONS_00065356|Name=TCONS_00065356|organism=Clytia hemisphaerica|type=transcript|length=18823bp|location=Sequence derived from alignment at scaffold_439:287898..306720+ (Clytia hemisphaerica)
AAACTGTTCCAAACTTACTTCAGAAAATACGTTAGAATCATCTCATAATG
TGTTGGTGTCATTATTATGAAATTCGGATGCTGTAATTGTCAATGGTTTT
GTCATCTACTTATCACATTATGAAAACAGAGGTATATGCTTGTGTTTGTA
AATTGCATTAAAAAAACTCTAATTCAATTAGCATGATTGCACAAACAAAC
TTATATCTTGTAACTTGAAGCCTTTATATTAGATAATTCTGCACTAACTT
GTACATGTACCCTCGTCGCTCAAACCGCCAGTTATTTTTACTAGTTGGCT
AGAAATTTTACCaaattagaaaatatttgaTCGACATTTACAATGCTAAT
AAATCAGAATAAATGTTCTTTTGAAAAGCGATGTTCATTAAAAATCGAAT
GGATTGTGTCAGAGTTTGGTAAGAAAGAGTCAAAATGTTAGGGTTAAAAG
GTTGAAATACGTATACGTAGATGTCTGAATCTGCGAACAATGTAATGCAA
TGCCCTCTAATATTTAACGCAAATCGAACCTGGCAAACCGGAATTGACCT
TCCTTTAATTATATGCGTTTGGCAACAACTTTTCTCCCACATGAATACTG
AACCTTCTCTTAATCCGTCCCTGCAAGGGACCAAAGGTCCAGAAAGGCTG
AAGAGTACTGAAGAGGCTTCAGTGATGTTTTGATGGATGcacattttcat
aaaatttttatcaaaattaattcGCTTTAGTCTTTTTTTAGCCGCCTCTT
TTATAGCCCCTCCGTTGGCCCCGCTGTATAAACTCCGTatagaaatatga
aaaacatgaaatatcATACCTTGCGCGCCATTTTGTGGCGtgattccaaa
aaacattttcgCCACCATACACAAAATTATTGATTAGCCTTTTAACCATA
TGTTCATTTGCCTGCCATTTAAACAACTCCTAGTGCATCAAGACCGTAAA
CAAATTCTCCACGAATTTCTTCCACTCTCCAAGAGGAAATAACACACGTT
TTGATACCAAGATTTATATCAGTAGAGTGTCAATACCTTTTTCTTGATCT
TAACAAATGATAAAAATCATTTCTTTTTgacttatacttttttttattcc
tCGCAAGCGCATAGAGCAACTTTACAATATTATTCTAATCttccaattaa
aaaaaattgttgcttCAAACAATGAACTTTAAGAAACCTCTCCTTTTTTG
TCAAAATCTCTGATAAGAACATCTTATATTTTGACATGACTTAACTTTGG
CCAAAAACTCGTTCAtaaaaattgcaattttggTACTCCGGGTTTTGACT
ATTCCGTATAAATGCAGTCGAGTCTTATATTAAACCCATGTGTCagaaat
ttgaaccaaagaacACTTATTTTGCATTGGATTACTGGATTGGAGCTGCT
TGCATTTTCTCATGATCAAGATTTATCATCTATATTACCAAACAAGCGCT
ATACTGCAAAATATTcttatcaaaaacattttggTTTNCCATCTATATTA
TCAAAAAAGCGCTATACtgcaaaatattcttataaaaaacattttggtTT
ATAATAAGATGTTCATTTATGAATGGAGACAACGGTTAATACGTTTGATT
TCTGACAGCATGCACATCATTGGACAGAAAATACATCCATTACAAGTTAA
TCAGCCTTTTTTAAACAGTGCCTTTATCTAAAGGCATTTTTTTAAAGCTG
GGGTGGCTTTTTAATCAGGTTTCGGAGGATTCCAGGGCGTGTAAAGCTCC
TTGTGGGGATAGTTTCCTAAAAGAACACCATACGTAGTAATATATAATAT
TCAACTCTTAACTATATCCCTATTTGATCTATTCACAATATTTGGTATGT
CTCAACACATACGGGATAATAAAATTGATAATACTTTGTTTTCAGAGCTT
CCATTTGGGAATTCCTGTAACGTGTCTAACTCACAGAACCACGTTGCAAT
AGTTCAACCCAACTTTAGTTCAAAATAACCCCCTAATCTTAGAATGATTA
CTTATATACTTATATTTTAgcctttttgacattttttaaaattgacattt
taggtttttgaacataactcTTGAACCATTgatgtaaaatcaaaaagcaA
TACAcgaaattttaagttaggctttcctctgaatgattccgaaacaatct
ttgaaaaatcttcctGCTTCTGCCtataatatcaaatcaaagagggtaac
ttatttgtggcacacccggtataaaCGTAAGCTTCTAGGCAATCGAAATA
TCCAACATTTCCAATAACTCACATTCCACGCATACTCATGTGAAAGAACC
CCCTGAAAGATTGacacaatttttcattttttgattgaactactgttttt
attttttcctattttcataGAGAATGCTGTGCTGGAATGATAATTAAATC
AAGATCATGCTAATTTTAAACTGCGAGTATTTTgaatttctctctttaaa
agcaaaaatattccattttcattgcTTTTTTTACCAAGATTTGCGCTAAG
TTTTGATGCGAATCTCTAAATGAAATATCAATTAAAAAGTGACCCTGTCG
CAAAATCACCAGTTTTGCTCAGTGAGCTCGTTGTGCAACTATGAAGGTCT
TAAAAGACCTCcttgaattgatttttgtaTAATCGTTGTGTGATAACTTT
CCTTTCTCGTAGTAACCAGTTCCATTAAGGTCGGTTTCAAACACCCCGCA
TCACTGATCTGTATGAAAACCCTTCCACTTGAAAGATTGCATTCCTTTTT
TTATCCAAACATGGGGGTAAACGAACATTTCCAGGCCCTAAGGAGTGTAA
AAAGTTCTTCTTTTGAGAATCTCAGCTGGATCTGCCCTGAGCTAAGTAAA
ATTCCAACAGAAATAGAGATGAATTTGCTAAATTTCGCACCGAGGCACTG
AGACAGTGGTGTGTTTTGTAAAATGATTAATTGGAAAATGTTTATCAAGT
CAATAACCTTGTGTCTCCAGCTAAAAAGTCTTTCAATGTCACAACATCGC
CAAAACCAAAAACTCGAACTTGTTGTAACCTTCTCTATAAAAAAGTCCAC
CCTAATAACGGGTGTTACGGACTTAATTGTGTTGTTTTGGCAATTAACGC
GAAGTTAATTGACTGGAGAATTGACTTATTGTTTTAATGTTCTTTTGTAT
TTCCCTTTTCGTATAATTTTTATGACCTCTAGGGAATTTCGTGTTTTCGA
TAAAATGTAATGTAATTTTCTTGAACTTTGagcaatcaaaaaatataact
gttttgAACTGTGATGTACACAGACGCTTGAggggggggttttcactttt
acggtatgacggtattgggcctttttacccccggtaaatcggtattacga
gaaaaaaacgacgggattacggtatttcattttctaccggtatcggtaaa
ttgcctgtttttttgtcggtatatcgatatttttatcaataaaaacggta
tttcggtataaaactatttaccttttagtttcttcatgagtttcatgcag
aaagattttcaaaaaagataagtctattccgctatcttaaccagtaaaat
tttcttgctcgcttcgctcgcacaatcttcGATGTTctattgacttattg
tcatggtgaggttattcaaaataagcaaaactttacgatatctaaacaaa
tattttcgttatttttctacgggcgcattttttaatgacaacttttaNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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Ngcatacttggctaacaatagcgtaataaggccgtttttcaataacaaag
gagagcgaaaattgtcgaaaaattttcgcgctcgcttcgctcgcctTCTT
ATTTTCCAGTTATTTTCTTACCTCTGCTGATAGGGGGGGTTGAACTTTAG
AGTTCGCGTCCTTTAGTTGCCCCACAGCACTACCAGTATGgagcctgtgt
tgaagtctacggcttctcagaccatgattggccaAAACCTCGATTTTata
aattaattctcaatataaaagacatcttacgggtctgcgaggaagaaatt
attgggggaaaggcttaattttgcatttgcctcccgtaacaagcaagtaa
ctttggcgtGGCAGACCtaaatattgctttatgaaagctcaaatagctgt
aaaagaggccttaaaaagtcgacgatatcgagaataaggtcacaaaccta
ccaaaaaactttatatattggcgaAAAGGTTGAATTTaccccaataaggt
cacaatcgtttaaccaaagatgtaaaagcaaaatcggtgcgtgaatacct
gaattgagggttgactggggggcctcataaagttgtacagtttctaattt
gttactacacaatagatttgataactgaaaattcattattttcgaaaaaa
aacataaatataatatcggtatcggtaNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNATAACTGTTTTGAACTGTGATGTACACAGACGCTTGACT
GCATTTTCTTGTGTGAGAAGTTTGCTGTTTTGGTCAACGTAACAAGTGGT
ATTTTTGCTCCATTGACAAACGGGATCCCAAAGAATGGAAAATATCAACT
TCCTACGAAACGTTGCTTCGACTTAACGTCCGTAACGACCAAATAATAGt
gagtttttgtatttttgaggacgatggagtgactgaagcgatttggaata
acccgtaGCTCTGACCCGAAGACAGGATTTAGATAAATGAGAAGCTAACC
GTCCCGCCATACATAAACTAGCAAATGTGTTTGAATGCTACAACAACGTC
TAATTGAGTTGTTGTTCCTTACACCTACCTCTGCAACAGTTGGAACTTCT
TGTGTCATTGTTGGTCAATCTCCTTGCAAACTCTTGATATGTCTCTTGTG
AATGTTTCTAATATTATTCACACATCCTATCCAGCAACAAACAATCctgg
tcataatatttgagaaaaaagggaaattcccacgaaatcgtatagccaca
aacgatttggaagcgctctaacttaaGTCAGAAGGGTATagtttaactct
gagttttcaCATGAGACTTTTCTAACTttcgaccttaggatctgaggatc
caaaagNTTCAcatgagacttaaaactttcgaccttaggatctgaggatc
tgaggatccaaagaGTTCCagaatagtccaataaggctcagaatatagcc
tggaactCTATAAACCCcactcaaattgaaatatttgattaaatttaaca
aatagcccaaaagcgactttctcgcccgaactttagaATGCTAAAAGcaa
ggaattaaccaaaattctcaatatattttgaccgatatTGTAGATGTATT
TTACATGACTTCACCGGTAACGTTCTGGTCCCATCCTTACAACAAACAGg
ttcaaaatattgaattaaaaactaattaattactatgtttttcagttttt
aagtttttccaaATAATGTAAACATCAACGCGATACTGTATAGCGGTTTG
TACTTTCACATGTCGCTTATTCTCATTTTTCCTTCAACGGACTGTCTGTC
TGTTATTGTCGACCTTCTTTTTCTGATTCTGGGAGAcaagaaaatgaaga
ataagTAAAAAGACAAGCTAAAAAGAGAATACTTTCGTTAATAATTCAGC
CTTTATGTATTCTCTTAGGTGATAAGTTTTCCCTATGAGTACTATTTATG
TTTTCTTGATTCTATCTTTCTTcgttgtacacgtttttttataagaacaa
aatatataagaacataaaggcttcgatggacaaaatatttggaacaagtt
aagaaaattttaaggccttatggactcaaaaacaccaaatttcttaagaa
aatagacaaaattactcaaaaaatagcgaaaataagaacattttaggcct
ATCAAAAAGcttagaacatccgaaggcttcaaaatttaggatgttcttat
aaaaaaaaacgtgtatctttcAAACTGAaagtcaaagattttgcttcTCG
TGAGAAAAGAGCAACGACGTTTCAAGATTTCTTTGAAAGCCTTGGAAGCT
ACTCGCtggatacacgcttttttaataagaatattcatgatgatattggc
cgaaaaattaactatattttggccatttttatccttgatgatatgaaaaa
aatatgaaaaaaaaacattctcataaaaaaagcgtgtatattcTCTCAGG
AACAAAATCGATCATTTGTCTTCTTATttattaccgtattacttcgaata
aacgcccccatcttttaaacgccccctcgaataaacgcccctcctaaaag
gaaaattatttattaaacgccccctcaaatagacgCCCCCTTCTAATGAA
CGCCCCCTCtaggggaggggcgtttattagtaacttgtgactttaatact
tcaatacCAGTGTTGATTGGGCTTGGAAAggaaaattttagtcatttctt
gtagCCAGAGCAGTTTTCCATGCAATTTTAGTCGttgaaacaaagaaatt
ttgcactagccactaaaatcctgataaagaactaaaacaaagggtatatt
tgctctaaatattcgactttagtctaaaataatttaataaacgccccctt
cttttaaacgcctccctcgaataaacgcccctccaaaaatcgaaaaaatt
aaataaaggcCCAATAAACGCCccaggcgtttattcgaagtaatacggta
tccGTTATCAAAACTGTGGAACAAACCCCGGGGGTTACTACTACCCTCAC
CGACCGATGGGGGTTATCTACTGACATTCGAAAAACGGATCCTATTTAGG
ACGGAATTGCAGAAAAAAGTAACCCtcaatgggactgaaattccaaaact
tTCTCATATTCTTACACCTTCTCCCAAATTGAAATTCCTCCTAAAaggta
ccctacgagggactgttTTTGCGAACTTGCCTGGGACTCATGAAGGTgga
aaaaggtaccctaaaagCGGCGCATCTTCGTACCCCTTTTTGCCAATATA
CCCACACCGGGGAACAAACAAGAGACCAGCCCCCAGACCTTGTTGGTGAA
AATTTATAGATTCCAATTGTCTAACTTCAAAAAGGTTTGGCTGAAGAGCC
ATTGCTTTTTCTGAGGTTCTACCGAGATACCACTTTGTTTGGAGGTTCTA
CCGAGACTTGTTTGTACCAGGCTTTTTGTGTGTGGCCTGGGGTGAGACGT
GCTCTTCTCGAGTCTCTCACCAATTGAGTCATAGGAACAAGGAATAAAGA
TATCGATACATATTTGAATACATTTCTGCTTGTGGTTGCAAGTTTTGTTA
GAAGTGTGTTCATATGGTTTTTCCCAATGACAAGTAGATCAATTGGGCTG
ATAACTATTTCATAAGTTTTAAAGTATTTGATGATACTGTATCGTGTTTC
ATTTAGAAATGTCGGGTCAATCGTggtcttttttcaaactttaaaggatt
agaaggagttagaagttttttcatagctcgttggatagcttagagtcccc
tctttcttttgggcgtcttcagcgccgcccgatttaggaaaaGCGGGTTG
GGCAGCGGCTAAAGGGGGGGGATAGGTTAGggctcgggtaacttaatgca
tgtcccaaaaatgcattaatttttccgccccagttccagtccctaaacca
taacaaattatacatttttggaagcgtatNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNaaatttgctgatgtcagcattttat
cgcaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaggttttcttaa
gatatctctaattatactgtgaaagaatttaagttacaccgaatacggta
ttctacatccaaatacgcttccaaaaatgtatagtttgttatggtttagg
gactggaactggggcggaaaaattaatgcaattctgggacatgcattaag
ttacccgagggGAATTCTAGCAGGTCTGATGACGGAAAGGTACCcatggt
aaaacttcaaatcaattcgcaagaggacagaataaagtataacagggcca
aatttggaggttcttggatcactcgttcaccaaaaatggtcaaagatTAC
CATCTGCTTCCCTCACACTTTTTAAGAAAGTATTTACCATAGATATGCCG
TGCAAGCCGAAATGCTGAGGTATTGGATTGAATTTAGTTCAAATTACAGT
CGACCTATGACGGAGTATCACAGTCTAATGGCCAATTGTCTGTATATATT
CTTGCTGTAAATAACAGAGAACCAATATTTACggaattcaaaatttcaaa
gatattGCCGTACTACTACACTACGTTAAACATGTTAAACACCCCTACGT
CACAGACCCGTTGAGACCCCCGACCCACTGGAGAAtgtggccaaaatttc
gtcgcCGTTGGGCAAAATACGCTaaaatttcagtcccacgcTAAAGTTTC
ATTTCATCCGCaatcgaaattcaatgtaaGAAAGAAAAACCATCGGACTG
AATTTTGAACGTTATAAAAGTTCCGCCGGGGCTATGACATAACACAGGAC
TGTCAAGAAAGTTGcgtaaattgtaaaatgttgaataatattTGTTTATC
TTGTTACCTTAGCAATATCGAAAtattaattttaaaaacacCCCTCACTC
ACAGACCCGTTAGGATTTCAGCctgtggggataaaaataagaataagaga
caggggattgatattccaataacttttatggctggggatttcaattcttt
tcaagtcagaaaattcatggggatggaaaaaatatcataatattttgcag
tgaggattggtttatttgattatgtATTATCAGTGGGTACAAAGATTTTC
CACCGGAGACgatattttgaataattaagGTCTGTGTTTTAAACGATCTT
TAATTTAAATTATCTGAAATTATTATTGGAAGGTTAGCCCGGGAGGAACT
CATAAGGTCCGACCCATGACATGTGCCGCCGTCAAGGATGGGTTTTTCAA
GACACTCGAAATACACTgaaagggtgtacttttgatagagtgcactatGA
GGGTCTCTTTTTAGATGGATGCattgtaagggtgtgttttcgGACAATGA
TACATCGATATTAATTGATAATGGGGTGATAATGTCTTGCTGAATTGGAA
GTCTGACAGGAAAATTCTGCACCTATTTCACATGTTCGATTTACACATCG
TGTGGGGTCGGGTGGTTTCAGCAAAATTAGACATGAAATCAACCCACCCC
CCACCCCACCCCCCTCCCTTGGAAGGTTACAGTATACACTATACTCAAGT
TGAAGTTCATTCTTTTCAACAGCTTTACAAgcgaagaaaaaatttcaaat
ttcagatttaaaaaggtttggctTTAGAGCCATTTTTTATTACAATTCGA
CAATTCTATTTCAAGGACCCGGGCATGTATTGTGTTTATTTGGCGTTTTG
TAGCCTGGCGGGTGAGAGGTTCTTTGACTCTCTCACCACGGTACCAGACT
AGTATCAAATCTTAAACGCACTGATTCATATTTGATCACAGATTTACTTG
TGGTTTGATGCTATATGCGTAAGGTTTTTCTCATTTACAGCTTAAAAGCT
GACACAAATCTATTTGGCTATTGTGACACAGTATTATATTACTATATGCA
GTAACGAGCACCGGATCGTATTCGATTATAAACACAAAATCTAAAAAGGA
AAAGTGTAGAATTTTCACGGTggtcccccgggggggggggttacttaggc
aaatggagggtacggtatgagccgcccttaagggtaccttttatggattt
ccaaagtcccgctaagggtcggaaaaatcagaaaatcaaatttcagtccc
aataagggtcgtaaaattcacaaaatctttctttgtttactcctttttag
tcccggtaagggtccaaggtTCGAAAGTCGGGCAGTACCCTCCCCCCGGG
ACTGTAGCCTATGTGATACACGttattttaataagaacatccaaattttt
tgaagctttcagatgttcttaacttttttagctttaagcctaaaaatgtt
catgacatgtttttattttcgccattttttgagtatttttgtccattttc
ctaagaaattgggtgttttagagtccgcgcagccttaaaatgttcttaac
ttgttcttaacattttggccaccgtagccttatgctcttatatagtttgt
ttttataaatatacgTGTACACTCATTTTTAAAAACGTCGAACGTCTTCA
CTGCAAATTTActaaatgaagatcttgtagaaaagtgctataactttcat
tttcactggagagattctttgatcttaggaggtcatcactgtgaagaaat
ttctcaaaaacatttattcaatataaaagtTATGatgcaaagttaataag
tgattgaccccaaaaaacagcagaaaacagcatttttagacgtcaatcag
cttataactttgtttgatcagagatttgggaaaagaggataagaatcgcc
gctgccgctcgctgttttctcaTTGTTGATCATTGAATTCGGCGTCGTCT
GAAGTCGCTAGGCTAGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGGC
GCAGATatttcaatagaacaaaaggttCCCTAGCCTATATTTCTATAGCT
GAATAGCgcaattcttatcctcttttcccaaatctctggtttgatatttt
ttgactgaatgattatttttgaaatattttttcacagttttttcgataat
caaggaatctctccagtgaaaatgatagctatagcacttttctacattgt
cttcatttttttcttcttcattttcattttcatttttagaatatttttaa
tgaattttttatttcaaatatgttccactcactaatatctttccaatgat
acataatttataaagattgaagaaatccttcaaaaattataggtaaaaga
aaaaagagtgcacacttatcgtgaatagattTTAGTCCCCTACTTTCAGA
CCTGATCTGCTAGTCTTGTTAATACTTGTATTACAATTACAAACTTGGGT
TCtgagaatttcaaatttaaGTAAAGTCTATGGTAGATATCTTGAACTTT
TGGACCCTTTCAGAAACTCAATTGCTAATTTATGTTTTTACTCCTTCGAG
AGATTTTCGAGGGCGTGTAAAGAGAGACCCTAATGGCTCCCCAACATCTT
TCCGTAGAACCCCCTTCCCGGGCCCACTCAAATTCGTCAGCTGGGTCAAG
TTTAAACTACAAACTTTTAAAACTAGTTTGGATGATAAAACTATTGAAAT
AAGAAACAAtctcaaaaattcatttgtTTACCTTAAtgttttgatattca
atgtccgctaattggagagggAAAATAAGGGTTCTGGCTGTTTTATGCAA
AAAGATTTGTCTACAAATttgagggtccgctaattgagtatCCGCCTATT
GGAAACTTTTGTATGCGGATTTGACTAGGAATAAATGAGATTGTCCACTT
ATCAGAGATGTCTGCCttccttttagagtgtccgttaattggaggtttCA
GTGTACtttaaaatttgcgaaaattgtaaaatgttgaataatattttatt
tgtcGTGTTAACTCAgcaatgaaaatattcaaatattgatacttgtaAGT
TATTGGAAGTTCTTTTTGGTTTAGTTTGGTAGTAAGGGTTAAAATTGCAC
TTTATTCCAGTTACGCAATACACTTTTATTATAAgcacaaactatataag
aacataaggcttcaatggccaaaatactaagaacaagttaagaacatttc
aaggcttcgcggactcaaaacaaccgatttcttaggaaaatggacaaaaa
atactcaaatgttaagaacatttttaggcttaaaactcaaaaagttaaga
acatccaaaggcttcaaaNtaggaaaatggacaaaaaatactcaaatgtt
aagaacatttttaggcttaaaactcaaaaagttaagaacatccaaaggct
tcaaaaattttggatgttcttataaaaaaacgtgtacacgttGTTTTCTT
ATTAGAACGTCTTAATTTTGGGCTGAACCTGAATATGCTTATtgttttga
caattttgagcctcaaatgTTCTCATTAGCCTTCTTGAAATTAATTCACT
TAAATCTACAGAATTACCTAAAGTTAAGAGGTCTGCAATTCGGACTAagt
aaaagtaaattttttcctAGTTTAAGTGAAACTTTGACTAATTCCCCTGG
GCTAGCCTAATCCGACAGGTACTTTTCCGAGCGATGTCGCTCCCAGTTCG
ACTTCTGGAAGGATGTGCTATTTCTTGATTGGCTACATAAATGGTCTGTG
ATGGCTTGCTGTTGGTGCATCTTGGTGGTGTAGATTTTACGCACTGAGCG
TCTGACACGGTTACTAAAGTAGTGTGACTTTTCACACTGTTACATAAATT
gcttttgtttgtcaaaatatttattcaactGAATAActctaaagaaaata
ttttttttaattttgaaaatttcagtaAAATTGAAGAGACAACGCACAAG
ACGTGATGGTTACATTGAAGattgatttttgattcatttGTACATCTGAA
GAAACTTCAAAATACACCTTGATCAATAACAAAAAACACCAGCAAACAAA
ACCACTATAAATATGTTAGATGCAGACGTATATCAACACTATATCAGGAC
ACGCTAGATCATCGACAACTTGCACTCGTTTGGTTTAACAACAAACCAAC
ATGAAGTTGATCATCGTCTTAGCTGCTTGCTTAGCATGTACTTTTGCAGG
TTTGtaatatcaaaaaaaattttagtacaGTATACATTTttaactatata
agaacataaggcttcgatagccaaaatattaagaacaagttaagaacata
tttaGGCTTAATTCTCAAAGAGTTAAGAACAAccggaggcttcaaaaatt
ttgggtgTTCTTATATAATAATAGTGTAATTGTTAAGGATACGTGCTGTT
GATTCTAATTCAAGCATTCATACACACTCACCGTGTTACTTGCTTGGTCG
GACCCCGTACTTACTGGGATAATAGACCCAAAAGTCGTTCACTGTGGGAG
CTCATCATTACtgttaaagaaatcaaaagcCGTTTGGCCATTTAGTAGCT
TTCCCTACTGACGTTAGAGAGCTGAAACAAGGTTCAAAATCAAACTACTG
gcaacaaaagttttcttccCCGTATATTTAGGTCTAGAAATTTTTCATCG
AATCAGTGAGATATTTGTGTGTATACAGTGCTGTGGTGTTCAACAGAGAG
AAAACTTACCCTACTTATTTGGAAATTCAACAGCTCTGAGAcctgttttt
tatttatttctgttttacttttttagtcAACCCATTGGatcaagctaaaa
aggttagTATTTAACTTTCAATTACCAACAATCAACCTTTCCACTAAAAG
GATTTAGCAGGGCAAAACTTTGTCAAATCACTTAAGTCATTACATATATT
GTAAACAAACCAGATATCTTTTGGGcgttcaaaattcattgccgaaATTT
ATTGTGCTATGTTACGATAAATGCTAAATTCCCCCTGGTACAGCATATAC
GTAGACCAGCTCATAGATATTTGACgttttgaaaactcaatatTAATGCT
AGAAGACTTATTCTAGAACGAAGtgggtataaaaagaaaaactagaGGAC
AAAAATGCAGTCTAGTTTATAAAATCTCATATTATTCCGTAATACCCATT
GTGACAACTTTTCTGTGCAACTTTTCTGTCTGTAGAAGGAAGTCCGTGCA
gttgagatttttcattaagGTTTTCGTCCCAATTGTAACCCTTGGAAGAA
CGAAATTTCTTGAATTGTTTTTTAACTTTCCGCCCAGATTAACCAAAAGG
TGGTTGCAACACTTAATATCTATATTATTAttgtacacccccttctcaca
gacgcggtaggatttttcagccagCGGGGATAAATAGGGAATATTCTCAT
ATTCTTTATCACTGGGGATTAcgattcttttgtttgaaagacaggaaatt
cagtggggatgggaaaaatagcatgatattttgcaatgaggattgattta
tttgattattttcagtggggacgaacattggagtataattttccaccggg
aacGATAATTGGGAAGGGGTACCAgtgggtctgcgagaagggggtgttat
tgTATAACACCCTTCCCCCCTGGATAcctgaattttaaaaaagttatttt
tgttttcaacatATTTAGTGTTTGTCTGAGCACAATGCATGCATCAAGAA
ATTGGAAAGCCAAGGAGTGGACTTCTTCCAATCTCGATCGAGATGTGGTG
CATGGTTCATTAAATGTGGTATGGAACCTGGATGTATCGAAAAGGTAAGG
AAGGTTTGCTCGAAAGCTCAAGATTGTTTTTACGTTTAGGCTGGAATTCC
GCCTAATTTCTCCTATAAGAAATGTGTGTAAATGTAAGTTAGAAAGGTAC
AATCTCTACCACTAATTACTTGACACAAACAAATCACTGCTATTAAACTG
TTGGAACCATATTTCTATGAAGTTAGGCCTGTCTAATATAAATTAATGAC
CGAATTTCAATCCTATTATGTTgaaattttccgacccttggTGGGACTGT
GGTTTAATTTGACCCTCACAGGGACTTCCAGAATCCAAAAAAGGACCCTT
AAGGACGGCACATACCCTTAACCTTCACTTACCTGAGCCCCCTACCGGTT
ACCACCAAGCTGGTAAAGAAAgcaaatattttatcaattgtgtttttgta
tattttcagTGCAACAAGTCAGCGTTAGCTTGCTTACAAAAGGATGTTAA
AAGTACCATCTGTTTGGAAGACGGGGGTAAATGCTACATGAAATGTAAAG
CCTACACCAAGTAAACTAACCATCTTtaattattattgtttttatgaaat
aatATAACAAATTTTTAAACTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040977XLOC_040977Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065356-exon-scaffold_439-1491911889:287898..288028TCONS_00065356-exon-scaffold_439-1491911889:287898..288028Clytia hemisphaericaexon
TCONS_00065356-exon-scaffold_439-1510915933:287898..288028TCONS_00065356-exon-scaffold_439-1510915933:287898..288028Clytia hemisphaericaexon
TCONS_00065356-exon-scaffold_439-1575043694:287898..288028TCONS_00065356-exon-scaffold_439-1575043694:287898..288028Clytia hemisphaericaexon
TCONS_00065356-exon-scaffold_439-1491911889:304273..304546TCONS_00065356-exon-scaffold_439-1491911889:304273..304546Clytia hemisphaericaexon
TCONS_00065356-exon-scaffold_439-1510915933:304273..304546TCONS_00065356-exon-scaffold_439-1510915933:304273..304546Clytia hemisphaericaexon
TCONS_00065356-exon-scaffold_439-1575043694:304273..304546TCONS_00065356-exon-scaffold_439-1575043694:304273..304546Clytia hemisphaericaexon
TCONS_00065356-exon-scaffold_439-1491911889:305124..305149TCONS_00065356-exon-scaffold_439-1491911889:305124..305149Clytia hemisphaericaexon
TCONS_00065356-exon-scaffold_439-1510915933:305124..305149TCONS_00065356-exon-scaffold_439-1510915933:305124..305149Clytia hemisphaericaexon
TCONS_00065356-exon-scaffold_439-1575043694:305124..305149TCONS_00065356-exon-scaffold_439-1575043694:305124..305149Clytia hemisphaericaexon
TCONS_00065356-exon-scaffold_439-1491911889:306016..306141TCONS_00065356-exon-scaffold_439-1491911889:306016..306141Clytia hemisphaericaexon
TCONS_00065356-exon-scaffold_439-1510915933:306016..306141TCONS_00065356-exon-scaffold_439-1510915933:306016..306141Clytia hemisphaericaexon
TCONS_00065356-exon-scaffold_439-1575043694:306016..306141TCONS_00065356-exon-scaffold_439-1575043694:306016..306141Clytia hemisphaericaexon
TCONS_00065356-exon-scaffold_439-1491911889:306557..306720TCONS_00065356-exon-scaffold_439-1491911889:306557..306720Clytia hemisphaericaexon
TCONS_00065356-exon-scaffold_439-1510915933:306557..306720TCONS_00065356-exon-scaffold_439-1510915933:306557..306720Clytia hemisphaericaexon
TCONS_00065356-exon-scaffold_439-1575043694:306557..306720TCONS_00065356-exon-scaffold_439-1575043694:306557..306720Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_439supercontigscaffold_439:287898..306720 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.11209	6.1673	4.35992	3.17498	0.0339757	1.68651	0.0804035	0.179159	0.547946	0.425927	0	0.796487	75.9027	59.7951	64.0331	175.372	4.39535	3.79881	406.967	350.315	13.4965	17.1612	41.2282	46.2102	50.0694	66.4132	0.730419	0.292937	4.1564	9.30766
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065356 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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