TCONS_00065360 (transcript) - C. hemisphaerica

Overview
NameTCONS_00065360
Unique NameTCONS_00065360
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length937

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00065360 ID=TCONS_00065360|Name=TCONS_00065360|organism=Clytia hemisphaerica|type=transcript|length=937bp
CTGTTTTGAACTGTGATGTACACAGACGCTTGACTGCATTTTCTTGTGTG
AGAAGTTTGCTGTTTTGGTCAACGTAACAAGTGGTATTTTTGCTCCATTG
ACAAACGGGATCCCAAAGAATGGAAAATATCAACTTCCTACGAAACGTTG
CTTCGACTTAACGTCCGTAACGACCAAATAATAtaAAATTGAAGAGACAA
CGCACAAGACGTGATGGTTACATTGAAGattgatttttgattcatttGTA
CATCTGAAGAAACTTCAAAATACACCTTGATCAATAACAAAAAACACCAG
CAAACAAAACCACTATAAATATGTTAGATGCAGACGTATATCAACACTAT
ATCAGGACACGCTAGATCATCGACAACTTGCACTCGTTTGGTTTAACAAC
AAACCAACATGAAGTTGATCATCGTCTTAGCTGCTTGCTTAGCATGTACT
TTTGCAGtcAACCCATTGGatcaagctaaaaagTGTTTGTCTGAGCACAA
TGCATGCATCAAGAAATTGGAAAGCCAAGGAGTGGACTTCTTCCAATCTC
GATCGAGATGTGGTGCATGGTTCATTAAATGTGGTATGGAACCTGGATGT
ATCGAAAAGTGCAACAAGTCAGCGTTAGCTTGCTTACAAAAGGATGTTAA
AAGTACCATCTGTTTGGAAGACGGGGGTAAATGCTACATGAAATGTAAAG
CCTACACCAAGTAAACTAACCATCTTtaattattattgtttttatgaaat
aatatataataaatttttaaacTCTCTGAAATATCGACTTGTTTTTATTT
CTCGGTTAAATCCAAGTTTCATTTTCAAGAGGAAACAAGGACAAAAATTT
ATTCCCTCTGTGCGGCACAGAAGCTCTGTCCTCTCCACCATTTATCTCAG
AGAGTGTAAAACGGGCCTTCCTATCTTGAATTCCTTA
Run BLAST on NCBI

transcript from alignment at scaffold_439:293213..309280+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00065360 ID=TCONS_00065360|Name=TCONS_00065360|organism=Clytia hemisphaerica|type=transcript|length=16068bp|location=Sequence derived from alignment at scaffold_439:293213..309280+ (Clytia hemisphaerica)
CTGTTTTGAACTGTGATGTACACAGACGCTTGACTGCATTTTCTTGTGTG
AGAAGTTTGCTGTTTTGGTCAACGTAACAAGTGGTATTTTTGCTCCATTG
ACAAACGGGATCCCAAAGAATGGAAAATATCAACTTCCTACGAAACGTTG
CTTCGACTTAACGTCCGTAACGACCAAATAATAGtgagtttttgtatttt
tgaggacgatggagtgactgaagcgatttggaataacccgtaGCTCTGAC
CCGAAGACAGGATTTAGATAAATGAGAAGCTAACCGTCCCGCCATACATA
AACTAGCAAATGTGTTTGAATGCTACAACAACGTCTAATTGAGTTGTTGT
TCCTTACACCTACCTCTGCAACAGTTGGAACTTCTTGTGTCATTGTTGGT
CAATCTCCTTGCAAACTCTTGATATGTCTCTTGTGAATGTTTCTAATATT
ATTCACACATCCTATCCAGCAACAAACAATCctggtcataatatttgaga
aaaaagggaaattcccacgaaatcgtatagccacaaacgatttggaagcg
ctctaacttaaGTCAGAAGGGTATagtttaactctgagttttcaCATGAG
ACTTTTCTAACTttcgaccttaggatctgaggatccaaaagNTTCAcatg
agacttaaaactttcgaccttaggatctgaggatctgaggatccaaagaG
TTCCagaatagtccaataaggctcagaatatagcctggaactCTATAAAC
CCcactcaaattgaaatatttgattaaatttaacaaatagcccaaaagcg
actttctcgcccgaactttagaATGCTAAAAGcaaggaattaaccaaaat
tctcaatatattttgaccgatatTGTAGATGTATTTTACATGACTTCACC
GGTAACGTTCTGGTCCCATCCTTACAACAAACAGgttcaaaatattgaat
taaaaactaattaattactatgtttttcagtttttaagtttttccaaATA
ATGTAAACATCAACGCGATACTGTATAGCGGTTTGTACTTTCACATGTCG
CTTATTCTCATTTTTCCTTCAACGGACTGTCTGTCTGTTATTGTCGACCT
TCTTTTTCTGATTCTGGGAGAcaagaaaatgaagaataagTAAAAAGACA
AGCTAAAAAGAGAATACTTTCGTTAATAATTCAGCCTTTATGTATTCTCT
TAGGTGATAAGTTTTCCCTATGAGTACTATTTATGTTTTCTTGATTCTAT
CTTTCTTcgttgtacacgtttttttataagaacaaaatatataagaacat
aaaggcttcgatggacaaaatatttggaacaagttaagaaaattttaagg
ccttatggactcaaaaacaccaaatttcttaagaaaatagacaaaattac
tcaaaaaatagcgaaaataagaacattttaggcctATCAAAAAGcttaga
acatccgaaggcttcaaaatttaggatgttcttataaaaaaaaacgtgta
tctttcAAACTGAaagtcaaagattttgcttcTCGTGAGAAAAGAGCAAC
GACGTTTCAAGATTTCTTTGAAAGCCTTGGAAGCTACTCGCtggatacac
gcttttttaataagaatattcatgatgatattggccgaaaaattaactat
attttggccatttttatccttgatgatatgaaaaaaatatgaaaaaaaaa
cattctcataaaaaaagcgtgtatattcTCTCAGGAACAAAATCGATCAT
TTGTCTTCTTATttattaccgtattacttcgaataaacgcccccatcttt
taaacgccccctcgaataaacgcccctcctaaaaggaaaattatttatta
aacgccccctcaaatagacgCCCCCTTCTAATGAACGCCCCCTCtagggg
aggggcgtttattagtaacttgtgactttaatacttcaatacCAGTGTTG
ATTGGGCTTGGAAAggaaaattttagtcatttcttgtagCCAGAGCAGTT
TTCCATGCAATTTTAGTCGttgaaacaaagaaattttgcactagccacta
aaatcctgataaagaactaaaacaaagggtatatttgctctaaatattcg
actttagtctaaaataatttaataaacgcccccttcttttaaacgcctcc
ctcgaataaacgcccctccaaaaatcgaaaaaattaaataaaggcCCAAT
AAACGCCccaggcgtttattcgaagtaatacggtatccGTTATCAAAACT
GTGGAACAAACCCCGGGGGTTACTACTACCCTCACCGACCGATGGGGGTT
ATCTACTGACATTCGAAAAACGGATCCTATTTAGGACGGAATTGCAGAAA
AAAGTAACCCtcaatgggactgaaattccaaaacttTCTCATATTCTTAC
ACCTTCTCCCAAATTGAAATTCCTCCTAAAaggtaccctacgagggactg
ttTTTGCGAACTTGCCTGGGACTCATGAAGGTggaaaaaggtaccctaaa
agCGGCGCATCTTCGTACCCCTTTTTGCCAATATACCCACACCGGGGAAC
AAACAAGAGACCAGCCCCCAGACCTTGTTGGTGAAAATTTATAGATTCCA
ATTGTCTAACTTCAAAAAGGTTTGGCTGAAGAGCCATTGCTTTTTCTGAG
GTTCTACCGAGATACCACTTTGTTTGGAGGTTCTACCGAGACTTGTTTGT
ACCAGGCTTTTTGTGTGTGGCCTGGGGTGAGACGTGCTCTTCTCGAGTCT
CTCACCAATTGAGTCATAGGAACAAGGAATAAAGATATCGATACATATTT
GAATACATTTCTGCTTGTGGTTGCAAGTTTTGTTAGAAGTGTGTTCATAT
GGTTTTTCCCAATGACAAGTAGATCAATTGGGCTGATAACTATTTCATAA
GTTTTAAAGTATTTGATGATACTGTATCGTGTTTCATTTAGAAATGTCGG
GTCAATCGTggtcttttttcaaactttaaaggattagaaggagttagaag
ttttttcatagctcgttggatagcttagagtcccctctttcttttgggcg
tcttcagcgccgcccgatttaggaaaaGCGGGTTGGGCAGCGGCTAAAGG
GGGGGGATAGGTTAGggctcgggtaacttaatgcatgtcccaaaaatgca
ttaatttttccgccccagttccagtccctaaaccataacaaattatacat
ttttggaagcgtatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNaaatttgctgatgtcagcattttatcgcaaaNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNaggttttcttaagatatctctaattat
actgtgaaagaatttaagttacaccgaatacggtattctacatccaaata
cgcttccaaaaatgtatagtttgttatggtttagggactggaactggggc
ggaaaaattaatgcaattctgggacatgcattaagttacccgagggGAAT
TCTAGCAGGTCTGATGACGGAAAGGTACCcatggtaaaacttcaaatcaa
ttcgcaagaggacagaataaagtataacagggccaaatttggaggttctt
ggatcactcgttcaccaaaaatggtcaaagatTACCATCTGCTTCCCTCA
CACTTTTTAAGAAAGTATTTACCATAGATATGCCGTGCAAGCCGAAATGC
TGAGGTATTGGATTGAATTTAGTTCAAATTACAGTCGACCTATGACGGAG
TATCACAGTCTAATGGCCAATTGTCTGTATATATTCTTGCTGTAAATAAC
AGAGAACCAATATTTACggaattcaaaatttcaaagatattGCCGTACTA
CTACACTACGTTAAACATGTTAAACACCCCTACGTCACAGACCCGTTGAG
ACCCCCGACCCACTGGAGAAtgtggccaaaatttcgtcgcCGTTGGGCAA
AATACGCTaaaatttcagtcccacgcTAAAGTTTCATTTCATCCGCaatc
gaaattcaatgtaaGAAAGAAAAACCATCGGACTGAATTTTGAACGTTAT
AAAAGTTCCGCCGGGGCTATGACATAACACAGGACTGTCAAGAAAGTTGc
gtaaattgtaaaatgttgaataatattTGTTTATCTTGTTACCTTAGCAA
TATCGAAAtattaattttaaaaacacCCCTCACTCACAGACCCGTTAGGA
TTTCAGCctgtggggataaaaataagaataagagacaggggattgatatt
ccaataacttttatggctggggatttcaattcttttcaagtcagaaaatt
catggggatggaaaaaatatcataatattttgcagtgaggattggtttat
ttgattatgtATTATCAGTGGGTACAAAGATTTTCCACCGGAGACgatat
tttgaataattaagGTCTGTGTTTTAAACGATCTTTAATTTAAATTATCT
GAAATTATTATTGGAAGGTTAGCCCGGGAGGAACTCATAAGGTCCGACCC
ATGACATGTGCCGCCGTCAAGGATGGGTTTTTCAAGACACTCGAAATACA
CTgaaagggtgtacttttgatagagtgcactatGAGGGTCTCTTTTTAGA
TGGATGCattgtaagggtgtgttttcgGACAATGATACATCGATATTAAT
TGATAATGGGGTGATAATGTCTTGCTGAATTGGAAGTCTGACAGGAAAAT
TCTGCACCTATTTCACATGTTCGATTTACACATCGTGTGGGGTCGGGTGG
TTTCAGCAAAATTAGACATGAAATCAACCCACCCCCCACCCCACCCCCCT
CCCTTGGAAGGTTACAGTATACACTATACTCAAGTTGAAGTTCATTCTTT
TCAACAGCTTTACAAgcgaagaaaaaatttcaaatttcagatttaaaaag
gtttggctTTAGAGCCATTTTTTATTACAATTCGACAATTCTATTTCAAG
GACCCGGGCATGTATTGTGTTTATTTGGCGTTTTGTAGCCTGGCGGGTGA
GAGGTTCTTTGACTCTCTCACCACGGTACCAGACTAGTATCAAATCTTAA
ACGCACTGATTCATATTTGATCACAGATTTACTTGTGGTTTGATGCTATA
TGCGTAAGGTTTTTCTCATTTACAGCTTAAAAGCTGACACAAATCTATTT
GGCTATTGTGACACAGTATTATATTACTATATGCAGTAACGAGCACCGGA
TCGTATTCGATTATAAACACAAAATCTAAAAAGGAAAAGTGTAGAATTTT
CACGGTggtcccccgggggggggggttacttaggcaaatggagggtacgg
tatgagccgcccttaagggtaccttttatggatttccaaagtcccgctaa
gggtcggaaaaatcagaaaatcaaatttcagtcccaataagggtcgtaaa
attcacaaaatctttctttgtttactcctttttagtcccggtaagggtcc
aaggtTCGAAAGTCGGGCAGTACCCTCCCCCCGGGACTGTAGCCTATGTG
ATACACGttattttaataagaacatccaaattttttgaagctttcagatg
ttcttaacttttttagctttaagcctaaaaatgttcatgacatgttttta
ttttcgccattttttgagtatttttgtccattttcctaagaaattgggtg
ttttagagtccgcgcagccttaaaatgttcttaacttgttcttaacattt
tggccaccgtagccttatgctcttatatagtttgtttttataaatatacg
TGTACACTCATTTTTAAAAACGTCGAACGTCTTCACTGCAAATTTActaa
atgaagatcttgtagaaaagtgctataactttcattttcactggagagat
tctttgatcttaggaggtcatcactgtgaagaaatttctcaaaaacattt
attcaatataaaagtTATGatgcaaagttaataagtgattgaccccaaaa
aacagcagaaaacagcatttttagacgtcaatcagcttataactttgttt
gatcagagatttgggaaaagaggataagaatcgccgctgccgctcgctgt
tttctcaTTGTTGATCATTGAATTCGGCGTCGTCTGAAGTCGCTAGGCTA
GGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGGCGCAGATatttcaata
gaacaaaaggttCCCTAGCCTATATTTCTATAGCTGAATAGCgcaattct
tatcctcttttcccaaatctctggtttgatattttttgactgaatgatta
tttttgaaatattttttcacagttttttcgataatcaaggaatctctcca
gtgaaaatgatagctatagcacttttctacattgtcttcatttttttctt
cttcattttcattttcatttttagaatatttttaatgaattttttatttc
aaatatgttccactcactaatatctttccaatgatacataatttataaag
attgaagaaatccttcaaaaattataggtaaaagaaaaaagagtgcacac
ttatcgtgaatagattTTAGTCCCCTACTTTCAGACCTGATCTGCTAGTC
TTGTTAATACTTGTATTACAATTACAAACTTGGGTTCtgagaatttcaaa
tttaaGTAAAGTCTATGGTAGATATCTTGAACTTTTGGACCCTTTCAGAA
ACTCAATTGCTAATTTATGTTTTTACTCCTTCGAGAGATTTTCGAGGGCG
TGTAAAGAGAGACCCTAATGGCTCCCCAACATCTTTCCGTAGAACCCCCT
TCCCGGGCCCACTCAAATTCGTCAGCTGGGTCAAGTTTAAACTACAAACT
TTTAAAACTAGTTTGGATGATAAAACTATTGAAATAAGAAACAAtctcaa
aaattcatttgtTTACCTTAAtgttttgatattcaatgtccgctaattgg
agagggAAAATAAGGGTTCTGGCTGTTTTATGCAAAAAGATTTGTCTACA
AATttgagggtccgctaattgagtatCCGCCTATTGGAAACTTTTGTATG
CGGATTTGACTAGGAATAAATGAGATTGTCCACTTATCAGAGATGTCTGC
CttccttttagagtgtccgttaattggaggtttCAGTGTACtttaaaatt
tgcgaaaattgtaaaatgttgaataatattttatttgtcGTGTTAACTCA
gcaatgaaaatattcaaatattgatacttgtaAGTTATTGGAAGTTCTTT
TTGGTTTAGTTTGGTAGTAAGGGTTAAAATTGCACTTTATTCCAGTTACG
CAATACACTTTTATTATAAgcacaaactatataagaacataaggcttcaa
tggccaaaatactaagaacaagttaagaacatttcaaggcttcgcggact
caaaacaaccgatttcttaggaaaatggacaaaaaatactcaaatgttaa
gaacatttttaggcttaaaactcaaaaagttaagaacatccaaaggcttc
aaaNtaggaaaatggacaaaaaatactcaaatgttaagaacatttttagg
cttaaaactcaaaaagttaagaacatccaaaggcttcaaaaattttggat
gttcttataaaaaaacgtgtacacgttGTTTTCTTATTAGAACGTCTTAA
TTTTGGGCTGAACCTGAATATGCTTATtgttttgacaattttgagcctca
aatgTTCTCATTAGCCTTCTTGAAATTAATTCACTTAAATCTACAGAATT
ACCTAAAGTTAAGAGGTCTGCAATTCGGACTAagtaaaagtaaatttttt
cctAGTTTAAGTGAAACTTTGACTAATTCCCCTGGGCTAGCCTAATCCGA
CAGGTACTTTTCCGAGCGATGTCGCTCCCAGTTCGACTTCTGGAAGGATG
TGCTATTTCTTGATTGGCTACATAAATGGTCTGTGATGGCTTGCTGTTGG
TGCATCTTGGTGGTGTAGATTTTACGCACTGAGCGTCTGACACGGTTACT
AAAGTAGTGTGACTTTTCACACTGTTACATAAATTgcttttgtttgtcaa
aatatttattcaactGAATAActctaaagaaaatattttttttaattttg
aaaatttcagtaAAATTGAAGAGACAACGCACAAGACGTGATGGTTACAT
TGAAGattgatttttgattcatttGTACATCTGAAGAAACTTCAAAATAC
ACCTTGATCAATAACAAAAAACACCAGCAAACAAAACCACTATAAATATG
TTAGATGCAGACGTATATCAACACTATATCAGGACACGCTAGATCATCGA
CAACTTGCACTCGTTTGGTTTAACAACAAACCAACATGAAGTTGATCATC
GTCTTAGCTGCTTGCTTAGCATGTACTTTTGCAGGTTTGtaatatcaaaa
aaaattttagtacaGTATACATTTttaactatataagaacataaggcttc
gatagccaaaatattaagaacaagttaagaacatatttaGGCTTAATTCT
CAAAGAGTTAAGAACAAccggaggcttcaaaaattttgggtgTTCTTATA
TAATAATAGTGTAATTGTTAAGGATACGTGCTGTTGATTCTAATTCAAGC
ATTCATACACACTCACCGTGTTACTTGCTTGGTCGGACCCCGTACTTACT
GGGATAATAGACCCAAAAGTCGTTCACTGTGGGAGCTCATCATTACtgtt
aaagaaatcaaaagcCGTTTGGCCATTTAGTAGCTTTCCCTACTGACGTT
AGAGAGCTGAAACAAGGTTCAAAATCAAACTACTGgcaacaaaagttttc
ttccCCGTATATTTAGGTCTAGAAATTTTTCATCGAATCAGTGAGATATT
TGTGTGTATACAGTGCTGTGGTGTTCAACAGAGAGAAAACTTACCCTACT
TATTTGGAAATTCAACAGCTCTGAGAcctgttttttatttatttctgttt
tacttttttagtcAACCCATTGGatcaagctaaaaaggttagTATTTAAC
TTTCAATTACCAACAATCAACCTTTCCACTAAAAGGATTTAGCAGGGCAA
AACTTTGTCAAATCACTTAAGTCATTACATATATTGTAAACAAACCAGAT
ATCTTTTGGGcgttcaaaattcattgccgaaATTTATTGTGCTATGTTAC
GATAAATGCTAAATTCCCCCTGGTACAGCATATACGTAGACCAGCTCATA
GATATTTGACgttttgaaaactcaatatTAATGCTAGAAGACTTATTCTA
GAACGAAGtgggtataaaaagaaaaactagaGGACAAAAATGCAGTCTAG
TTTATAAAATCTCATATTATTCCGTAATACCCATTGTGACAACTTTTCTG
TGCAACTTTTCTGTCTGTAGAAGGAAGTCCGTGCAgttgagatttttcat
taagGTTTTCGTCCCAATTGTAACCCTTGGAAGAACGAAATTTCTTGAAT
TGTTTTTTAACTTTCCGCCCAGATTAACCAAAAGGTGGTTGCAACACTTA
ATATCTATATTATTAttgtacacccccttctcacagacgcggtaggattt
ttcagccagCGGGGATAAATAGGGAATATTCTCATATTCTTTATCACTGG
GGATTAcgattcttttgtttgaaagacaggaaattcagtggggatgggaa
aaatagcatgatattttgcaatgaggattgatttatttgattattttcag
tggggacgaacattggagtataattttccaccgggaacGATAATTGGGAA
GGGGTACCAgtgggtctgcgagaagggggtgttattgTATAACACCCTTC
CCCCCTGGATAcctgaattttaaaaaagttatttttgttttcaacatATT
TAGTGTTTGTCTGAGCACAATGCATGCATCAAGAAATTGGAAAGCCAAGG
AGTGGACTTCTTCCAATCTCGATCGAGATGTGGTGCATGGTTCATTAAAT
GTGGTATGGAACCTGGATGTATCGAAAAGGTAAGGAAGGTTTGCTCGAAA
GCTCAAGATTGTTTTTACGTTTAGGCTGGAATTCCGCCTAATTTCTCCTA
TAAGAAATGTGTGTAAATGTAAGTTAGAAAGGTACAATCTCTACCACTAA
TTACTTGACACAAACAAATCACTGCTATTAAACTGTTGGAACCATATTTC
TATGAAGTTAGGCCTGTCTAATATAAATTAATGACCGAATTTCAATCCTA
TTATGTTgaaattttccgacccttggTGGGACTGTGGTTTAATTTGACCC
TCACAGGGACTTCCAGAATCCAAAAAAGGACCCTTAAGGACGGCACATAC
CCTTAACCTTCACTTACCTGAGCCCCCTACCGGTTACCACCAAGCTGGTA
AAGAAAgcaaatattttatcaattgtgtttttgtatattttcagTGCAAC
AAGTCAGCGTTAGCTTGCTTACAAAAGGATGTTAAAAGTACCATCTGTTT
GGAAGACGGGGGTAAATGCTACATGAAATGTAAAGCCTACACCAAGTAAA
CTAACCATCTTtaattattattgtttttatgaaataatATAACAAATTTT
TAAACTCTCTGAAATATCGACTTGTTTTTATTTCTCGGTTAAATCCAAGT
TTCATTTTCAAGAGGAAACAAGGACAAAAATTTATTCCCTCTGTGCGGCA
CAGAGGCTCTGTCCTCTCCACCATTTATCTCAGAGAGTGTAAAACGGGCC
TTCCTATCTTGAATTCCTTAAAAACTTTCCAACAAAACTGTCATTAATTT
TTCGACGTAACAGTTTATGAAGTTCTGGTTGTGATAAAATGTAGATAAAT
GCATCTAACATCCAACCAATAGCATAGGAAGCTGTCACAACCAGACCAAC
GATATAGCTTACCATTTCATTAGCATTGGCAATATAAACCCACAGTACGG
TTTGATCTGGtataatgataaaaataatgAAGGAAATCACCAAAAGTGAA
GGCGTATAAAAGCCTTTCCTCAAATCTCGTAATTTCTGTAATAGGTTTTT
TCGTTCAGGGCTACCGCTAGAGTCgccatttttattttgaaatgatgtaa
tctttcgcttattttcttgtattttcttgAAGAAATAAATATACGTCAAT
GTAACCAGGATTAAGTAAGGGAACTCGCATACCGGCCATAGATAAACTAG
TATCCGAACAGCTTTCTTCTCTTCCCCATTATAAGTGATTGTTGGGATGA
ATATCACCCAAGCCAATATCCAAACCAAAACTGAGGCTAGTTTTGCTTTG
CGCATGCTCCAATACAGACTATATTTGATGTTCaaataaacagataaaaa
tcGATCGACCGTGATTAAAGTCATTGCTCCAAAGTACACAATATNTTGtt
cattgggtaaatatctgggggtctacaattgggcctatgaataatttgaa
gccactgaagttgagcccagtgcgttgcgcacgttcgactatttttaCGT
TTAGGCTGGAATTCCGTCCAAATTTCTCCTATAAGAAATGTGTGTAAATG
TAAGTTAGAAAGGTACAATCTCTACCACTAATTACTTGACACAAGCAAAT
CACTGCTATTAAACTGTTGGAaccatatttctaaaaagttcggCCTGTct
aatattattattatacagtaTACAAGTTCACAGNCAAGAGATGGAAGCTT
GAGTCTTTGTAAACGCTCCTCATAGTGGAGATTACGATACTGCGGAATCA
GTCTTGTTGCCCGTCTTTGGACCCCTTCAATCAGATTAATATAAATTAAT
GACCGAATTTCAATCCTATTATGTTgaaattttccgacccttggTGGGAC
TGTGGTTTAATTTGACCCTCACAGGGACTTCCAGAATCCAAAAAAGGACC
CTTAAGGACGGCACATACCCTTAACCTTCACTTACCTGGGCCCCCTACCG
GTTACCACCAAGCTGGTAAAGAAAgcaaatattttatcaattgtgttttt
gtatattttcagTGCAACAAGTCAGCGTTAGCTTGCTTACAAAAGGATGT
TAAAAGTACCATCTGTTTGGAAGACGGGGGTAAATGCTACATGAAATGTA
AAGCCTACACCAAGTAAACTAACCATCTTtaattattattgtttttatga
aataatATAACAAATTTTTAAACTCTCTGAAATATCGACTTGTTTTTATT
TCTCGGTTAAATCCAAGTTTCATTTTCAAGAGGAAACAAGGACAAAAATT
TATTCCCTCTGTGCGGCACAGAGGCTCTGTCCTCTCCACCATTTATCTCA
GAGAGTGTAAAACGGGCCTTCCTATCTTGAATTCCTTAAAAACTTTCCAA
CAAAACTGTCATTAATTTTTCGACGTAACAGTTTATGAAGTTCTGGTTGT
GATAAAATGTAGATAAATGCATCTAACATCCAACCAATAGCATAGGAAGC
TGTCACAACCAGACCAACGATATAGCTTACCATTTCATTAGCATTGGCAA
TATAAACCCACAGTACGGTTTGATCTGGtataatgataaaaataatgAAG
GAAATCACCAAAAGTGAAGGCGTATAAAAGCCTTTCCTCAAATCTCGTAA
TTTCTGTAATAGGTTTTTTCGTTCAGGGCTACCGCTAGAGTCgccatttt
tattttgaaatgatgtaatctttcgcttattttcttgtattttcttgAAG
AAATAAATATACGTCAATGTAACCAGGATTAAGTAAGGGAACTCGCATAC
CGGCCATAGATAGACTAGTATCCGAACAGCTTTCTTCTCTTCCCCATTAT
AAGTGATTGTTGGGATGAATATCACCCAAGCCAATATCCAAACCAAAACT
GAGGCTAGCTTTGCTTTGCGCATGCTCCAATACAGACTATATTGNTGGAA
GACGGGGGTAAATGCTACATGAAATGTAAAGCCTACACCAAGTAAACTAA
CCATCTTtaattattattgtttttatgaaataatatataataaattttta
aacTCTCTGAAATATCGACTTGTTTTTATTTCTCGGTTAAATCCAAGTTT
CATTTTCAAGAGGAAACAAGGACAAAAATTTATTCCCTCTGTGCGGCACA
GAAGCTCTGTCCTCTCCACCATTTATCTCAGAGAGTGTAAAACGGGCCTT
CCTATCTTGAATTCCTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040977XLOC_040977Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00065360-exon-scaffold_439-1491911889:293213..293395TCONS_00065360-exon-scaffold_439-1491911889:293213..293395Clytia hemisphaericaexon
TCONS_00065360-exon-scaffold_439-1510915933:293213..293395TCONS_00065360-exon-scaffold_439-1510915933:293213..293395Clytia hemisphaericaexon
TCONS_00065360-exon-scaffold_439-1575043694:293213..293395TCONS_00065360-exon-scaffold_439-1575043694:293213..293395Clytia hemisphaericaexon
TCONS_00065360-exon-scaffold_439-1491911889:304273..304546TCONS_00065360-exon-scaffold_439-1491911889:304273..304546Clytia hemisphaericaexon
TCONS_00065360-exon-scaffold_439-1510915933:304273..304546TCONS_00065360-exon-scaffold_439-1510915933:304273..304546Clytia hemisphaericaexon
TCONS_00065360-exon-scaffold_439-1575043694:304273..304546TCONS_00065360-exon-scaffold_439-1575043694:304273..304546Clytia hemisphaericaexon
TCONS_00065360-exon-scaffold_439-1491911889:305124..305149TCONS_00065360-exon-scaffold_439-1491911889:305124..305149Clytia hemisphaericaexon
TCONS_00065360-exon-scaffold_439-1510915933:305124..305149TCONS_00065360-exon-scaffold_439-1510915933:305124..305149Clytia hemisphaericaexon
TCONS_00065360-exon-scaffold_439-1575043694:305124..305149TCONS_00065360-exon-scaffold_439-1575043694:305124..305149Clytia hemisphaericaexon
TCONS_00065360-exon-scaffold_439-1491911889:306016..306141TCONS_00065360-exon-scaffold_439-1491911889:306016..306141Clytia hemisphaericaexon
TCONS_00065360-exon-scaffold_439-1510915933:306016..306141TCONS_00065360-exon-scaffold_439-1510915933:306016..306141Clytia hemisphaericaexon
TCONS_00065360-exon-scaffold_439-1575043694:306016..306141TCONS_00065360-exon-scaffold_439-1575043694:306016..306141Clytia hemisphaericaexon
TCONS_00065360-exon-scaffold_439-1491911889:306557..306634TCONS_00065360-exon-scaffold_439-1491911889:306557..306634Clytia hemisphaericaexon
TCONS_00065360-exon-scaffold_439-1510915933:306557..306634TCONS_00065360-exon-scaffold_439-1510915933:306557..306634Clytia hemisphaericaexon
TCONS_00065360-exon-scaffold_439-1575043694:306557..306634TCONS_00065360-exon-scaffold_439-1575043694:306557..306634Clytia hemisphaericaexon
TCONS_00065360-exon-scaffold_439-1491911889:309031..309280TCONS_00065360-exon-scaffold_439-1491911889:309031..309280Clytia hemisphaericaexon
TCONS_00065360-exon-scaffold_439-1510915933:309031..309280TCONS_00065360-exon-scaffold_439-1510915933:309031..309280Clytia hemisphaericaexon
TCONS_00065360-exon-scaffold_439-1575043694:309031..309280TCONS_00065360-exon-scaffold_439-1575043694:309031..309280Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_439supercontigscaffold_439:293213..309280 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.92639	8.67771	3.36424	0.101363	0.799214	0.475722	1.05584	0.988463	0.138409	0.514327	0.92084	0.218778	3.86291	6.93636	0.0540187	3.39868	0	0.212782	8.93786	2.04918	0.954769	1.43164	16.4466	8.65663	2.09391	1.93676	0.188525	0.721075	4.93155	6.4317
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065360 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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